Multiple sequence alignment - TraesCS2D01G273700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G273700 chr2D 100.000 7249 0 0 1 7249 340589732 340596980 0.000000e+00 13387.0
1 TraesCS2D01G273700 chr2D 100.000 1680 0 0 7481 9160 340597212 340598891 0.000000e+00 3103.0
2 TraesCS2D01G273700 chr2D 83.162 291 39 7 8873 9160 172395840 172396123 3.280000e-64 257.0
3 TraesCS2D01G273700 chr2D 91.597 119 6 3 4367 4483 562902814 562902698 2.650000e-35 161.0
4 TraesCS2D01G273700 chr2B 93.716 3119 121 23 1302 4391 406445661 406448733 0.000000e+00 4604.0
5 TraesCS2D01G273700 chr2B 94.310 1283 34 11 4482 5727 406448728 406450008 0.000000e+00 1929.0
6 TraesCS2D01G273700 chr2B 92.873 884 51 5 5791 6673 406450005 406450877 0.000000e+00 1273.0
7 TraesCS2D01G273700 chr2B 91.309 909 36 13 7975 8844 406452269 406453173 0.000000e+00 1201.0
8 TraesCS2D01G273700 chr2B 94.241 764 28 9 544 1293 406444829 406445590 0.000000e+00 1153.0
9 TraesCS2D01G273700 chr2B 93.186 499 29 3 7481 7976 406451691 406452187 0.000000e+00 728.0
10 TraesCS2D01G273700 chr2B 84.261 521 44 19 6756 7238 406450900 406451420 2.990000e-129 473.0
11 TraesCS2D01G273700 chr2B 88.889 315 27 1 234 548 406405441 406405747 1.870000e-101 381.0
12 TraesCS2D01G273700 chr2B 90.638 235 20 2 2 235 406404620 406404853 2.480000e-80 311.0
13 TraesCS2D01G273700 chr2B 87.288 236 29 1 130 365 735235018 735235252 1.520000e-67 268.0
14 TraesCS2D01G273700 chr2B 82.653 294 46 5 8870 9160 769491870 769492161 1.180000e-63 255.0
15 TraesCS2D01G273700 chr2B 82.759 290 45 5 8873 9159 225583544 225583257 4.250000e-63 254.0
16 TraesCS2D01G273700 chr2B 92.308 117 7 1 4385 4499 25123228 25123344 2.050000e-36 165.0
17 TraesCS2D01G273700 chr2B 91.304 46 3 1 6133 6178 746108630 746108674 2.760000e-05 62.1
18 TraesCS2D01G273700 chr2B 100.000 29 0 0 6784 6812 74019534 74019562 5.000000e-03 54.7
19 TraesCS2D01G273700 chr2A 93.698 1682 77 9 2734 4391 450887383 450885707 0.000000e+00 2492.0
20 TraesCS2D01G273700 chr2A 91.978 1471 85 17 1313 2755 450888960 450887495 0.000000e+00 2032.0
21 TraesCS2D01G273700 chr2A 87.486 1726 132 32 7481 9158 450882712 450881023 0.000000e+00 1914.0
22 TraesCS2D01G273700 chr2A 91.962 958 32 21 359 1296 450889964 450889032 0.000000e+00 1301.0
23 TraesCS2D01G273700 chr2A 92.905 888 56 6 5791 6676 450884385 450883503 0.000000e+00 1284.0
24 TraesCS2D01G273700 chr2A 93.683 839 25 10 4909 5727 450885212 450884382 0.000000e+00 1230.0
25 TraesCS2D01G273700 chr2A 90.969 454 18 3 4482 4912 450885712 450885259 2.850000e-164 590.0
26 TraesCS2D01G273700 chr2A 87.126 435 39 14 6745 7169 450883476 450883049 2.310000e-130 477.0
27 TraesCS2D01G273700 chr2A 82.677 381 54 8 6784 7154 193881463 193881085 2.470000e-85 327.0
28 TraesCS2D01G273700 chr2A 84.407 295 34 3 8878 9160 37262973 37262679 7.000000e-71 279.0
29 TraesCS2D01G273700 chr2A 97.436 39 1 0 1862 1900 53448325 53448287 5.940000e-07 67.6
30 TraesCS2D01G273700 chr2A 97.436 39 1 0 1862 1900 80993910 80993872 5.940000e-07 67.6
31 TraesCS2D01G273700 chr2A 100.000 29 0 0 6784 6812 50062218 50062246 5.000000e-03 54.7
32 TraesCS2D01G273700 chr2A 100.000 28 0 0 6784 6811 257883168 257883195 1.700000e-02 52.8
33 TraesCS2D01G273700 chr5B 86.364 462 45 9 2930 3390 175236374 175235930 1.070000e-133 488.0
34 TraesCS2D01G273700 chr5B 88.987 227 23 2 3636 3861 175235932 175235707 7.000000e-71 279.0
35 TraesCS2D01G273700 chr5B 100.000 30 0 0 6783 6812 577513934 577513963 1.000000e-03 56.5
36 TraesCS2D01G273700 chr1D 88.750 240 25 2 126 365 37958969 37959206 9.000000e-75 292.0
37 TraesCS2D01G273700 chr1D 94.393 107 6 0 4377 4483 74280195 74280089 2.050000e-36 165.0
38 TraesCS2D01G273700 chr4B 88.333 240 26 2 126 365 643448013 643447776 4.190000e-73 287.0
39 TraesCS2D01G273700 chr1B 88.333 240 26 2 126 365 193008227 193007990 4.190000e-73 287.0
40 TraesCS2D01G273700 chr1B 86.975 238 29 2 126 363 310182237 310182002 5.450000e-67 267.0
41 TraesCS2D01G273700 chr1B 82.759 290 46 3 8873 9160 448528184 448527897 1.180000e-63 255.0
42 TraesCS2D01G273700 chr3A 88.235 238 26 2 126 363 357055987 357056222 5.410000e-72 283.0
43 TraesCS2D01G273700 chr3A 86.975 238 28 3 126 363 556289595 556289829 1.960000e-66 265.0
44 TraesCS2D01G273700 chr3A 77.926 299 55 5 8873 9160 33991694 33991992 9.450000e-40 176.0
45 TraesCS2D01G273700 chr5A 87.395 238 27 2 126 363 275252291 275252525 4.220000e-68 270.0
46 TraesCS2D01G273700 chr5A 96.190 105 3 1 4386 4489 19982586 19982482 4.400000e-38 171.0
47 TraesCS2D01G273700 chr5A 97.436 39 1 0 1862 1900 5698902 5698864 5.940000e-07 67.6
48 TraesCS2D01G273700 chr7B 85.062 241 30 4 126 365 209319306 209319541 3.300000e-59 241.0
49 TraesCS2D01G273700 chr4D 96.154 104 4 0 4380 4483 54412663 54412560 4.400000e-38 171.0
50 TraesCS2D01G273700 chr4D 95.370 108 3 2 4386 4492 298543566 298543460 4.400000e-38 171.0
51 TraesCS2D01G273700 chr4D 96.154 104 3 1 4382 4484 457526181 457526284 1.580000e-37 169.0
52 TraesCS2D01G273700 chr7A 93.694 111 7 0 4386 4496 222500873 222500983 5.690000e-37 167.0
53 TraesCS2D01G273700 chr7A 80.519 154 25 5 6854 7006 63556427 63556278 7.520000e-21 113.0
54 TraesCS2D01G273700 chr3D 95.283 106 4 1 4381 4486 19269819 19269715 5.690000e-37 167.0
55 TraesCS2D01G273700 chr3B 87.395 119 15 0 8873 8991 678173846 678173964 4.460000e-28 137.0
56 TraesCS2D01G273700 chr6A 86.777 121 16 0 8871 8991 462250024 462249904 1.600000e-27 135.0
57 TraesCS2D01G273700 chr6A 97.436 39 1 0 1862 1900 551843413 551843375 5.940000e-07 67.6
58 TraesCS2D01G273700 chr6A 100.000 29 0 0 6784 6812 442083023 442083051 5.000000e-03 54.7
59 TraesCS2D01G273700 chr6B 74.823 282 58 9 8873 9150 559022908 559022636 2.090000e-21 115.0
60 TraesCS2D01G273700 chr1A 97.500 40 1 0 1862 1901 478359953 478359992 1.650000e-07 69.4
61 TraesCS2D01G273700 chr1A 97.436 39 1 0 1862 1900 146177026 146177064 5.940000e-07 67.6
62 TraesCS2D01G273700 chr4A 97.436 39 1 0 1862 1900 558646961 558646923 5.940000e-07 67.6
63 TraesCS2D01G273700 chr5D 100.000 30 0 0 6783 6812 469943535 469943564 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G273700 chr2D 340589732 340598891 9159 False 8245.0 13387 100.000000 1 9160 2 chr2D.!!$F2 9159
1 TraesCS2D01G273700 chr2B 406444829 406453173 8344 False 1623.0 4604 91.985143 544 8844 7 chr2B.!!$F7 8300
2 TraesCS2D01G273700 chr2B 406404620 406405747 1127 False 346.0 381 89.763500 2 548 2 chr2B.!!$F6 546
3 TraesCS2D01G273700 chr2A 450881023 450889964 8941 True 1415.0 2492 91.225875 359 9158 8 chr2A.!!$R5 8799
4 TraesCS2D01G273700 chr5B 175235707 175236374 667 True 383.5 488 87.675500 2930 3861 2 chr5B.!!$R1 931

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 884 0.693049 TCCAAAGGAGTCTCCAAGCC 59.307 55.000 21.26 0.0 39.61 4.35 F
1154 1759 0.768221 ATCTGGGTCGGGCCATATGT 60.768 55.000 4.39 0.0 39.65 2.29 F
1391 2063 0.955919 CGGAGGGAACTGAACTTGCC 60.956 60.000 0.00 0.0 44.43 4.52 F
2426 3126 1.004440 GGCAGATACGGGGCATCTC 60.004 63.158 0.00 0.0 30.18 2.75 F
2428 3128 1.290324 CAGATACGGGGCATCTCGG 59.710 63.158 0.00 0.0 30.18 4.63 F
4186 5046 0.529773 TTTTGTGACGCGCTGAGACT 60.530 50.000 5.73 0.0 0.00 3.24 F
5850 6821 0.532862 AGAACTGTGGCGAAGTGTGG 60.533 55.000 0.00 0.0 0.00 4.17 F
5880 6851 0.548031 TCCTGGCATGAATGACTCCC 59.452 55.000 0.00 0.0 36.54 4.30 F
7199 8212 0.394192 CTATCAATGGCGGCTCCTCA 59.606 55.000 11.43 0.0 35.26 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2078 2768 0.031994 GCAACGTGGCCAAAGTCATT 59.968 50.000 7.24 0.0 0.00 2.57 R
3092 3937 0.909623 ACAGGGTCCCAATTCCTACG 59.090 55.000 11.55 0.0 0.00 3.51 R
3221 4066 4.189231 AGAAGACAGCACAACGTAAAACT 58.811 39.130 0.00 0.0 0.00 2.66 R
4163 5023 1.129251 CTCAGCGCGTCACAAAATGAT 59.871 47.619 8.43 0.0 40.28 2.45 R
4372 5232 2.439880 AGGGAGTATAAAAGAGCAGGGC 59.560 50.000 0.00 0.0 0.00 5.19 R
5880 6851 0.661020 AAAGCGGTTCGGAACACTTG 59.339 50.000 21.36 9.6 32.01 3.16 R
7181 8194 0.394192 CTGAGGAGCCGCCATTGATA 59.606 55.000 0.00 0.0 40.02 2.15 R
7597 8639 1.101635 GCAGATCCCGTAAAAGGCCC 61.102 60.000 0.00 0.0 0.00 5.80 R
8538 9678 0.039256 TGCGAGCACTCCATTTTTGC 60.039 50.000 0.00 0.0 36.45 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 6.239176 CCTTACTTTTCAAAGGCACCACATAA 60.239 38.462 4.36 0.00 40.31 1.90
83 84 9.768662 AATTAAGAATGTTTGAAACAGAAGCAT 57.231 25.926 16.43 3.55 45.95 3.79
84 85 8.578308 TTAAGAATGTTTGAAACAGAAGCATG 57.422 30.769 16.43 0.00 45.95 4.06
87 88 4.044336 TGTTTGAAACAGAAGCATGTGG 57.956 40.909 6.66 0.00 36.25 4.17
114 115 5.509670 GGTTCCTGTTAAGCAAAGCAAGAAT 60.510 40.000 0.00 0.00 0.00 2.40
184 185 8.715088 AGCAAAATCACAAAGAGAAAAATATGC 58.285 29.630 0.00 0.00 0.00 3.14
189 191 8.847444 ATCACAAAGAGAAAAATATGCGAATC 57.153 30.769 0.00 0.00 0.00 2.52
199 201 9.118300 AGAAAAATATGCGAATCTCATTCTTCT 57.882 29.630 0.00 0.00 37.13 2.85
224 226 4.065088 TGGTCACATCTACAGCAAAGTTC 58.935 43.478 0.00 0.00 0.00 3.01
226 228 4.153117 GGTCACATCTACAGCAAAGTTCAG 59.847 45.833 0.00 0.00 0.00 3.02
231 233 7.877612 TCACATCTACAGCAAAGTTCAGAAATA 59.122 33.333 0.00 0.00 0.00 1.40
232 234 8.671921 CACATCTACAGCAAAGTTCAGAAATAT 58.328 33.333 0.00 0.00 0.00 1.28
247 837 9.937175 GTTCAGAAATATGTATAGAAAAGTGGC 57.063 33.333 0.00 0.00 0.00 5.01
262 852 1.000521 TGGCCAGCCCTCAAATCTG 60.001 57.895 0.00 0.00 34.56 2.90
276 866 2.751806 CAAATCTGTGGGAGGAGCTTTC 59.248 50.000 0.00 0.00 0.00 2.62
294 884 0.693049 TCCAAAGGAGTCTCCAAGCC 59.307 55.000 21.26 0.00 39.61 4.35
344 934 5.347907 GCTTTTGCTTCCAAATCATCTTGAG 59.652 40.000 0.00 0.00 40.40 3.02
349 939 7.177921 TTTGCTTCCAAATCATCTTGAGAAGAT 59.822 33.333 13.82 0.00 41.00 2.40
363 953 6.652481 TCTTGAGAAGATTCTTAACCTGCAAG 59.348 38.462 0.00 8.41 37.73 4.01
445 1035 3.941188 CGTGGTGGTGCTGGAGGT 61.941 66.667 0.00 0.00 0.00 3.85
452 1042 0.835971 TGGTGCTGGAGGTAGAAGCA 60.836 55.000 0.00 0.00 44.36 3.91
878 1481 1.455217 GACCCCGACTAGCTGCCTA 60.455 63.158 0.00 0.00 0.00 3.93
903 1506 2.186826 CACCCAATCCGCCGGAATC 61.187 63.158 11.19 0.00 34.34 2.52
920 1525 2.514458 ATCCCTCAGTCGGCAAAAAT 57.486 45.000 0.00 0.00 0.00 1.82
1154 1759 0.768221 ATCTGGGTCGGGCCATATGT 60.768 55.000 4.39 0.00 39.65 2.29
1164 1769 1.071071 GGGCCATATGTTACTGCCGTA 59.929 52.381 4.39 0.00 43.09 4.02
1169 1774 3.678072 CCATATGTTACTGCCGTATTCCG 59.322 47.826 1.24 0.00 0.00 4.30
1196 1802 1.683917 CTTCGGACCTGGAATCTCGAT 59.316 52.381 0.00 0.00 0.00 3.59
1311 1955 3.060602 GCTCTAATGGTGATAAGCGTCC 58.939 50.000 0.00 0.00 0.00 4.79
1321 1993 2.796483 ATAAGCGTCCGTGGCTGCAA 62.796 55.000 0.50 0.00 41.39 4.08
1372 2044 5.006165 CGATTTTACTGCTCCAAGATCACTC 59.994 44.000 0.00 0.00 0.00 3.51
1391 2063 0.955919 CGGAGGGAACTGAACTTGCC 60.956 60.000 0.00 0.00 44.43 4.52
1420 2092 3.747266 GAGCATCCTGGCATCTGC 58.253 61.111 7.70 7.70 41.14 4.26
1532 2207 8.846211 GGTTTTGGCATTAGTAATATTAGCTGA 58.154 33.333 0.00 0.00 0.00 4.26
1596 2271 7.542534 TGTTAAGAAGACAATAAACACGTGT 57.457 32.000 17.22 17.22 0.00 4.49
1597 2272 7.623770 TGTTAAGAAGACAATAAACACGTGTC 58.376 34.615 23.61 7.46 41.62 3.67
2077 2767 5.163509 TGTCCATCTTATGTACTCTGCTGTC 60.164 44.000 0.00 0.00 0.00 3.51
2078 2768 4.956075 TCCATCTTATGTACTCTGCTGTCA 59.044 41.667 0.00 0.00 0.00 3.58
2220 2913 8.404000 GCATTCTGTTTTATCTTGATCAGTCAT 58.596 33.333 0.00 0.00 33.56 3.06
2274 2970 1.523758 AATGTCGAACCAGAACCTGC 58.476 50.000 0.00 0.00 0.00 4.85
2282 2978 1.145571 ACCAGAACCTGCTAAACCCA 58.854 50.000 0.00 0.00 0.00 4.51
2327 3023 9.039870 CATAATGTTGTCTCTGAGTAAATCTCC 57.960 37.037 4.32 0.00 42.12 3.71
2350 3046 6.497259 TCCTTTCATATAGCCCTCGAGTAAAT 59.503 38.462 12.31 2.11 0.00 1.40
2424 3124 1.376466 ATGGCAGATACGGGGCATC 59.624 57.895 0.00 0.00 45.90 3.91
2426 3126 1.004440 GGCAGATACGGGGCATCTC 60.004 63.158 0.00 0.00 30.18 2.75
2428 3128 1.290324 CAGATACGGGGCATCTCGG 59.710 63.158 0.00 0.00 30.18 4.63
2522 3222 7.880713 TGTATGCCTTCTCTGTAATTTTGTACA 59.119 33.333 0.00 0.00 33.04 2.90
2618 3318 5.503002 TGACATCATCAGTGAACCATCATT 58.497 37.500 0.00 0.00 38.01 2.57
2671 3371 6.372381 TGAACTCCACATTGTCAATATGAGTG 59.628 38.462 17.66 12.69 32.56 3.51
2795 3630 5.415701 TCATTTGGGTCTTGAAGCATAAGTC 59.584 40.000 0.00 0.00 0.00 3.01
2852 3687 2.202295 TGCTTGAAGTGTTTTTCCGC 57.798 45.000 0.00 0.00 0.00 5.54
2890 3735 6.789262 AGTTCTAATTTCTCAATGCCATTCG 58.211 36.000 0.00 0.00 0.00 3.34
2900 3745 5.879777 TCTCAATGCCATTCGTGAATCTTTA 59.120 36.000 0.00 0.00 0.00 1.85
2967 3812 4.330074 CACTGGTAAGATGTGAAATCGGAC 59.670 45.833 0.00 0.00 33.95 4.79
3061 3906 9.620660 CACTCTTGGTGTTTGGTAATTTTATAC 57.379 33.333 0.00 0.00 40.79 1.47
3062 3907 9.582648 ACTCTTGGTGTTTGGTAATTTTATACT 57.417 29.630 0.00 0.00 0.00 2.12
3158 4003 8.186821 GGTTAGAATCTTCTGAAATGTTGATGG 58.813 37.037 2.69 0.00 38.19 3.51
3221 4066 6.593807 TGATATGGTCAATGATGTGTGATGA 58.406 36.000 0.00 0.00 32.78 2.92
3258 4103 5.623824 GCTGTCTTCTTTGGCAATCATTCAT 60.624 40.000 0.00 0.00 0.00 2.57
3259 4104 5.957798 TGTCTTCTTTGGCAATCATTCATC 58.042 37.500 0.00 0.00 0.00 2.92
3261 4106 6.885918 TGTCTTCTTTGGCAATCATTCATCTA 59.114 34.615 0.00 0.00 0.00 1.98
3409 4264 7.065923 ACAACTTTCTTAGTTCAGAGGTTTGTC 59.934 37.037 0.00 0.00 45.29 3.18
3412 4267 3.326880 TCTTAGTTCAGAGGTTTGTCCCC 59.673 47.826 0.00 0.00 36.75 4.81
3447 4303 9.515226 TTGTCATGTTAGGTTTAAGCTAAATCT 57.485 29.630 16.69 3.90 39.54 2.40
3552 4409 4.235079 TCCCAGACCAATACAATGGAAG 57.765 45.455 0.00 0.00 43.54 3.46
3809 4666 6.587990 CAGTTTATACACTTCACCACTCAGAG 59.412 42.308 0.00 0.00 0.00 3.35
3964 4824 6.826231 TGGTATGTTTGTGAACTCTGAAGAAA 59.174 34.615 0.00 0.00 36.70 2.52
3966 4826 5.818136 TGTTTGTGAACTCTGAAGAAAGG 57.182 39.130 0.00 0.00 36.70 3.11
4002 4862 6.987992 TCATTAAGGTTCGTTCACACTACTTT 59.012 34.615 0.00 0.00 0.00 2.66
4017 4877 4.946157 CACTACTTTACTTCGACCCTAGGA 59.054 45.833 11.48 0.00 0.00 2.94
4053 4913 2.051334 TGGCCCCTTCAATACATTCG 57.949 50.000 0.00 0.00 0.00 3.34
4151 5011 8.281212 AGTTCACTTTTTGTCTATCTGTTGTT 57.719 30.769 0.00 0.00 0.00 2.83
4163 5023 9.562408 TGTCTATCTGTTGTTTTATGTTGGTTA 57.438 29.630 0.00 0.00 0.00 2.85
4186 5046 0.529773 TTTTGTGACGCGCTGAGACT 60.530 50.000 5.73 0.00 0.00 3.24
4276 5136 8.089115 ACTTGTTCTCTTCTTAAGTTACATGC 57.911 34.615 1.63 0.00 0.00 4.06
4304 5164 7.668525 AAGATTTCTACCCTAAGTTTGTTCG 57.331 36.000 0.00 0.00 0.00 3.95
4308 5168 5.382618 TCTACCCTAAGTTTGTTCGTCTC 57.617 43.478 0.00 0.00 0.00 3.36
4344 5204 0.988145 TAGAATGGCCCACCTCCAGG 60.988 60.000 0.00 0.00 36.98 4.45
4373 5233 7.919690 TCATCTAACTGCATTTAACTATGTGC 58.080 34.615 0.00 0.00 38.05 4.57
4384 5244 2.887151 ACTATGTGCCCTGCTCTTTT 57.113 45.000 0.00 0.00 0.00 2.27
4385 5245 4.301072 AACTATGTGCCCTGCTCTTTTA 57.699 40.909 0.00 0.00 0.00 1.52
4386 5246 4.510167 ACTATGTGCCCTGCTCTTTTAT 57.490 40.909 0.00 0.00 0.00 1.40
4387 5247 5.630415 ACTATGTGCCCTGCTCTTTTATA 57.370 39.130 0.00 0.00 0.00 0.98
4388 5248 5.368989 ACTATGTGCCCTGCTCTTTTATAC 58.631 41.667 0.00 0.00 0.00 1.47
4389 5249 4.510167 ATGTGCCCTGCTCTTTTATACT 57.490 40.909 0.00 0.00 0.00 2.12
4390 5250 3.873910 TGTGCCCTGCTCTTTTATACTC 58.126 45.455 0.00 0.00 0.00 2.59
4391 5251 3.206964 GTGCCCTGCTCTTTTATACTCC 58.793 50.000 0.00 0.00 0.00 3.85
4392 5252 2.172717 TGCCCTGCTCTTTTATACTCCC 59.827 50.000 0.00 0.00 0.00 4.30
4393 5253 2.439880 GCCCTGCTCTTTTATACTCCCT 59.560 50.000 0.00 0.00 0.00 4.20
4394 5254 3.495276 GCCCTGCTCTTTTATACTCCCTC 60.495 52.174 0.00 0.00 0.00 4.30
4395 5255 3.071747 CCCTGCTCTTTTATACTCCCTCC 59.928 52.174 0.00 0.00 0.00 4.30
4396 5256 3.243907 CCTGCTCTTTTATACTCCCTCCG 60.244 52.174 0.00 0.00 0.00 4.63
4397 5257 3.371965 TGCTCTTTTATACTCCCTCCGT 58.628 45.455 0.00 0.00 0.00 4.69
4398 5258 3.773119 TGCTCTTTTATACTCCCTCCGTT 59.227 43.478 0.00 0.00 0.00 4.44
4399 5259 4.142004 TGCTCTTTTATACTCCCTCCGTTC 60.142 45.833 0.00 0.00 0.00 3.95
4400 5260 4.740034 GCTCTTTTATACTCCCTCCGTTCC 60.740 50.000 0.00 0.00 0.00 3.62
4401 5261 4.355549 TCTTTTATACTCCCTCCGTTCCA 58.644 43.478 0.00 0.00 0.00 3.53
4402 5262 4.778958 TCTTTTATACTCCCTCCGTTCCAA 59.221 41.667 0.00 0.00 0.00 3.53
4403 5263 5.248934 TCTTTTATACTCCCTCCGTTCCAAA 59.751 40.000 0.00 0.00 0.00 3.28
4404 5264 5.502089 TTTATACTCCCTCCGTTCCAAAA 57.498 39.130 0.00 0.00 0.00 2.44
4405 5265 5.703730 TTATACTCCCTCCGTTCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
4406 5266 6.811634 TTATACTCCCTCCGTTCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
4407 5267 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4408 5268 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4409 5269 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4410 5270 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4411 5271 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4412 5272 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4413 5273 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
4414 5274 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
4415 5275 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
4416 5276 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
4417 5277 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
4418 5278 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
4419 5279 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
4420 5280 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
4421 5281 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
4422 5282 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
4423 5283 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
4424 5284 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
4425 5285 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
4426 5286 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
4427 5287 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
4428 5288 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
4429 5289 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
4430 5290 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
4431 5291 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
4432 5292 8.434392 AGATGACCCAACTTTGTACTAACTTTA 58.566 33.333 0.00 0.00 0.00 1.85
4433 5293 8.983702 ATGACCCAACTTTGTACTAACTTTAA 57.016 30.769 0.00 0.00 0.00 1.52
4434 5294 8.983702 TGACCCAACTTTGTACTAACTTTAAT 57.016 30.769 0.00 0.00 0.00 1.40
4437 5297 9.850198 ACCCAACTTTGTACTAACTTTAATACA 57.150 29.630 0.00 0.00 0.00 2.29
4457 5317 8.756486 AATACAAAGTTAGTACAAAGTTGGGT 57.244 30.769 0.00 0.00 0.00 4.51
4458 5318 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
4459 5319 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
4460 5320 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
4461 5321 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
4462 5322 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
4463 5323 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
4464 5324 7.970102 AGTTAGTACAAAGTTGGGTCATCTAA 58.030 34.615 0.00 0.00 0.00 2.10
4465 5325 8.603304 AGTTAGTACAAAGTTGGGTCATCTAAT 58.397 33.333 0.00 0.00 0.00 1.73
4466 5326 9.227777 GTTAGTACAAAGTTGGGTCATCTAATT 57.772 33.333 0.00 0.00 0.00 1.40
4467 5327 9.802039 TTAGTACAAAGTTGGGTCATCTAATTT 57.198 29.630 0.00 0.00 0.00 1.82
4468 5328 8.110860 AGTACAAAGTTGGGTCATCTAATTTG 57.889 34.615 0.00 0.00 0.00 2.32
4469 5329 6.345096 ACAAAGTTGGGTCATCTAATTTGG 57.655 37.500 0.00 0.00 0.00 3.28
4470 5330 6.074648 ACAAAGTTGGGTCATCTAATTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
4471 5331 6.553100 ACAAAGTTGGGTCATCTAATTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
4472 5332 6.590234 AAGTTGGGTCATCTAATTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
4473 5333 4.700213 AGTTGGGTCATCTAATTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
4474 5334 3.616219 TGGGTCATCTAATTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
4475 5335 3.264706 TGGGTCATCTAATTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
4476 5336 3.877508 GGGTCATCTAATTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
4477 5337 3.877508 GGTCATCTAATTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4478 5338 3.877508 GTCATCTAATTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4479 5339 3.778075 TCATCTAATTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4480 5340 3.906720 TCTAATTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4512 5372 9.258826 CTTAGTCCATAAGAAGATGATGAGTTG 57.741 37.037 0.00 0.00 43.17 3.16
4518 5378 7.012138 CCATAAGAAGATGATGAGTTGTTGAGG 59.988 40.741 0.00 0.00 0.00 3.86
4519 5379 4.260170 AGAAGATGATGAGTTGTTGAGGC 58.740 43.478 0.00 0.00 0.00 4.70
4548 5408 5.187186 TCCTCGGTTCTAGCTTTAAGTTGAT 59.813 40.000 0.00 0.00 0.00 2.57
4602 5496 5.979517 GGACCAAGATTTGAGAACTTTTGTG 59.020 40.000 0.00 0.00 0.00 3.33
4689 5583 2.393646 ACAAAAACCAAAGCCAGGCTA 58.606 42.857 16.56 0.00 38.25 3.93
4808 5708 0.743097 GCCTGGATCTGAAATGTGGC 59.257 55.000 0.00 0.00 0.00 5.01
5006 5963 9.399797 TGATGATACATTCAGCTTTTGACTATT 57.600 29.630 0.00 0.00 41.44 1.73
5009 5966 9.890629 TGATACATTCAGCTTTTGACTATTACT 57.109 29.630 0.00 0.00 34.94 2.24
5024 5981 0.882927 TTACTTGGCAGTGTCACGGC 60.883 55.000 18.52 18.52 38.59 5.68
5108 6066 6.151648 CAGAAGTTAAATTGGAATCTGAGGCA 59.848 38.462 0.00 0.00 35.91 4.75
5525 6496 5.003160 TGTAAACTGTGGATGGTCAATCTG 58.997 41.667 0.00 0.00 35.43 2.90
5680 6651 9.276590 CATATGCTTTTTGACTGATATAGACCA 57.723 33.333 0.00 0.00 0.00 4.02
5727 6698 9.796180 TTTCCCTGAAAATGATGAAAATGAAAT 57.204 25.926 0.00 0.00 0.00 2.17
5728 6699 9.796180 TTCCCTGAAAATGATGAAAATGAAATT 57.204 25.926 0.00 0.00 38.98 1.82
5769 6740 2.888834 AAAAATGGACGTGCAAGCTT 57.111 40.000 15.51 5.19 0.00 3.74
5770 6741 2.888834 AAAATGGACGTGCAAGCTTT 57.111 40.000 15.51 11.22 0.00 3.51
5771 6742 2.138596 AAATGGACGTGCAAGCTTTG 57.861 45.000 15.51 0.00 0.00 2.77
5784 6755 4.931661 CAAGCTTTGCCTCATTCCATAT 57.068 40.909 0.00 0.00 0.00 1.78
5786 6757 6.585695 CAAGCTTTGCCTCATTCCATATAT 57.414 37.500 0.00 0.00 0.00 0.86
5787 6758 6.989659 CAAGCTTTGCCTCATTCCATATATT 58.010 36.000 0.00 0.00 0.00 1.28
5788 6759 8.114331 CAAGCTTTGCCTCATTCCATATATTA 57.886 34.615 0.00 0.00 0.00 0.98
5789 6760 7.693969 AGCTTTGCCTCATTCCATATATTAC 57.306 36.000 0.00 0.00 0.00 1.89
5790 6761 6.372659 AGCTTTGCCTCATTCCATATATTACG 59.627 38.462 0.00 0.00 0.00 3.18
5791 6762 6.371548 GCTTTGCCTCATTCCATATATTACGA 59.628 38.462 0.00 0.00 0.00 3.43
5792 6763 7.094805 GCTTTGCCTCATTCCATATATTACGAA 60.095 37.037 0.00 0.00 0.00 3.85
5793 6764 8.684386 TTTGCCTCATTCCATATATTACGAAA 57.316 30.769 0.00 0.00 0.00 3.46
5814 6785 5.746990 AAGAGTGTTGCAAGGTAGTAGAT 57.253 39.130 0.00 0.00 0.00 1.98
5819 6790 8.978472 AGAGTGTTGCAAGGTAGTAGATATTTA 58.022 33.333 0.00 0.00 0.00 1.40
5848 6819 1.670811 CAAAGAACTGTGGCGAAGTGT 59.329 47.619 0.00 0.00 0.00 3.55
5849 6820 1.299541 AAGAACTGTGGCGAAGTGTG 58.700 50.000 0.00 0.00 0.00 3.82
5850 6821 0.532862 AGAACTGTGGCGAAGTGTGG 60.533 55.000 0.00 0.00 0.00 4.17
5880 6851 0.548031 TCCTGGCATGAATGACTCCC 59.452 55.000 0.00 0.00 36.54 4.30
5891 6862 1.348064 ATGACTCCCAAGTGTTCCGA 58.652 50.000 0.00 0.00 35.28 4.55
5906 6877 2.325082 CCGAACCGCTTTCACCCAG 61.325 63.158 0.00 0.00 33.24 4.45
5908 6879 0.882927 CGAACCGCTTTCACCCAGAA 60.883 55.000 0.00 0.00 33.24 3.02
5913 6884 1.460699 GCTTTCACCCAGAACCCCT 59.539 57.895 0.00 0.00 35.56 4.79
5932 6903 3.445857 CCTCCTCGGTCTTAATCGTTTC 58.554 50.000 0.00 0.00 0.00 2.78
6044 7015 2.224450 ACCGACCAGTAGAACCAAAAGG 60.224 50.000 0.00 0.00 0.00 3.11
6051 7022 4.394729 CAGTAGAACCAAAAGGCCTAACA 58.605 43.478 5.16 0.00 0.00 2.41
6071 7042 1.177401 GATGGAGAAGGTTGGGCAAC 58.823 55.000 0.00 0.00 40.45 4.17
6094 7065 5.121105 CCCTAAACGTATACAGAAAAGGGG 58.879 45.833 15.00 8.38 37.98 4.79
6098 7069 4.230745 ACGTATACAGAAAAGGGGCAAT 57.769 40.909 3.32 0.00 0.00 3.56
6100 7071 3.247648 CGTATACAGAAAAGGGGCAATCG 59.752 47.826 3.32 0.00 0.00 3.34
6117 7088 8.984764 GGGGCAATCGATTTATTTATTTAAACC 58.015 33.333 8.21 0.00 0.00 3.27
6157 7128 0.600057 CCAAAACCTCTTGGCTCTGC 59.400 55.000 0.00 0.00 39.55 4.26
6183 7154 7.238486 ACCATATTAAGTTTCATGCACCAAA 57.762 32.000 0.00 0.00 0.00 3.28
6271 7242 1.429423 CTGGCGGCCGAAAGAATTC 59.571 57.895 33.48 8.16 0.00 2.17
6328 7299 1.142060 ACCACCAATCTTTGACCGTCA 59.858 47.619 0.00 0.00 0.00 4.35
6363 7334 3.417101 TGTGTTGGTGTGAAAGTCAACT 58.583 40.909 0.00 0.00 39.87 3.16
6371 7342 4.278419 GGTGTGAAAGTCAACTAAGCCAAT 59.722 41.667 0.00 0.00 0.00 3.16
6425 7396 1.474332 GGTCCACCGTCAACACCCTA 61.474 60.000 0.00 0.00 0.00 3.53
6444 7415 5.047092 ACCCTATTTTGGAATGTGAAGCAAG 60.047 40.000 0.00 0.00 0.00 4.01
6457 7429 3.665871 GTGAAGCAAGCGAAGATTTTGAC 59.334 43.478 0.00 0.00 27.80 3.18
6488 7462 4.420214 AGGAGCCCAGGTATTCCAAATAAT 59.580 41.667 4.43 0.00 35.89 1.28
6489 7463 5.615261 AGGAGCCCAGGTATTCCAAATAATA 59.385 40.000 4.43 0.00 35.89 0.98
6539 7513 6.523201 CCTTAAAATTGAATCGCTGTACACAC 59.477 38.462 0.00 0.00 0.00 3.82
6721 7695 7.979786 ATATTCTCTCTTTACTGTCCTTGGA 57.020 36.000 0.00 0.00 0.00 3.53
6722 7696 6.882768 ATTCTCTCTTTACTGTCCTTGGAT 57.117 37.500 0.00 0.00 0.00 3.41
6723 7697 7.979786 ATTCTCTCTTTACTGTCCTTGGATA 57.020 36.000 0.00 0.00 0.00 2.59
6724 7698 7.979786 TTCTCTCTTTACTGTCCTTGGATAT 57.020 36.000 0.00 0.00 0.00 1.63
6725 7699 7.353414 TCTCTCTTTACTGTCCTTGGATATG 57.647 40.000 0.00 0.00 0.00 1.78
6726 7700 7.126061 TCTCTCTTTACTGTCCTTGGATATGA 58.874 38.462 0.00 0.00 0.00 2.15
6727 7701 7.068839 TCTCTCTTTACTGTCCTTGGATATGAC 59.931 40.741 0.00 0.00 0.00 3.06
6728 7702 6.897966 TCTCTTTACTGTCCTTGGATATGACT 59.102 38.462 0.00 0.00 0.00 3.41
6729 7703 8.059461 TCTCTTTACTGTCCTTGGATATGACTA 58.941 37.037 0.00 0.00 0.00 2.59
6730 7704 8.008513 TCTTTACTGTCCTTGGATATGACTAC 57.991 38.462 0.00 0.00 0.00 2.73
6731 7705 7.839705 TCTTTACTGTCCTTGGATATGACTACT 59.160 37.037 0.00 0.00 0.00 2.57
6732 7706 9.132923 CTTTACTGTCCTTGGATATGACTACTA 57.867 37.037 0.00 0.00 0.00 1.82
6733 7707 9.656323 TTTACTGTCCTTGGATATGACTACTAT 57.344 33.333 0.00 0.00 0.00 2.12
6734 7708 7.531857 ACTGTCCTTGGATATGACTACTATG 57.468 40.000 0.00 0.00 0.00 2.23
6735 7709 7.069986 ACTGTCCTTGGATATGACTACTATGT 58.930 38.462 0.00 0.00 0.00 2.29
6736 7710 7.231722 ACTGTCCTTGGATATGACTACTATGTC 59.768 40.741 0.00 0.00 37.47 3.06
6737 7711 6.493802 TGTCCTTGGATATGACTACTATGTCC 59.506 42.308 0.00 0.00 36.63 4.02
6738 7712 6.493802 GTCCTTGGATATGACTACTATGTCCA 59.506 42.308 0.00 0.00 41.99 4.02
6739 7713 6.493802 TCCTTGGATATGACTACTATGTCCAC 59.506 42.308 3.39 0.00 42.95 4.02
6740 7714 6.495181 CCTTGGATATGACTACTATGTCCACT 59.505 42.308 3.39 0.00 42.95 4.00
6741 7715 7.309499 CCTTGGATATGACTACTATGTCCACTC 60.309 44.444 3.39 0.00 42.95 3.51
6742 7716 6.010850 TGGATATGACTACTATGTCCACTCC 58.989 44.000 0.00 0.00 39.81 3.85
6743 7717 6.183361 TGGATATGACTACTATGTCCACTCCT 60.183 42.308 0.00 0.00 39.81 3.69
6744 7718 6.722129 GGATATGACTACTATGTCCACTCCTT 59.278 42.308 0.00 0.00 36.26 3.36
6745 7719 7.233757 GGATATGACTACTATGTCCACTCCTTT 59.766 40.741 0.00 0.00 36.26 3.11
6746 7720 6.875972 ATGACTACTATGTCCACTCCTTTT 57.124 37.500 0.00 0.00 36.21 2.27
6747 7721 6.681729 TGACTACTATGTCCACTCCTTTTT 57.318 37.500 0.00 0.00 36.21 1.94
6769 7743 6.985188 TTTTCCTTCATGAGTATTTCTCCG 57.015 37.500 0.00 0.00 42.12 4.63
6817 7791 6.763355 TCTAGCAGATCCCATAAAATCTCAC 58.237 40.000 0.00 0.00 29.77 3.51
6897 7871 3.254657 CGGCAGAACAGAACCCATAAAAA 59.745 43.478 0.00 0.00 0.00 1.94
6906 7880 6.811954 ACAGAACCCATAAAAATCGTTTTGT 58.188 32.000 0.00 0.00 37.51 2.83
6907 7881 7.269316 ACAGAACCCATAAAAATCGTTTTGTT 58.731 30.769 0.00 0.00 37.51 2.83
6908 7882 7.766738 ACAGAACCCATAAAAATCGTTTTGTTT 59.233 29.630 0.00 0.00 37.51 2.83
6988 7962 3.971245 AAGCACCCTGAAAACAAAACA 57.029 38.095 0.00 0.00 0.00 2.83
7011 7985 2.243221 AGATTGCAATTGGGTCCTAGCT 59.757 45.455 14.33 0.00 0.00 3.32
7014 7988 1.387295 GCAATTGGGTCCTAGCTGCC 61.387 60.000 7.72 0.00 0.00 4.85
7076 8084 3.790334 TAGCTAGCACGCATGGCCG 62.790 63.158 18.83 0.00 0.00 6.13
7198 8211 0.394565 ACTATCAATGGCGGCTCCTC 59.605 55.000 11.43 0.00 35.26 3.71
7199 8212 0.394192 CTATCAATGGCGGCTCCTCA 59.606 55.000 11.43 0.00 35.26 3.86
7534 8576 1.976474 GGGACGAGGCCATTTTGCA 60.976 57.895 5.01 0.00 0.00 4.08
7544 8586 3.053395 AGGCCATTTTGCAGGATCTAGAA 60.053 43.478 5.01 0.00 0.00 2.10
7549 8591 5.595542 CCATTTTGCAGGATCTAGAATGGAA 59.404 40.000 8.11 7.02 42.78 3.53
7577 8619 2.376109 TCCGCCCAAAACTGTAAAACA 58.624 42.857 0.00 0.00 0.00 2.83
7597 8639 4.320870 ACAGTGGTTATTTTACAGGTCCG 58.679 43.478 0.00 0.00 0.00 4.79
7600 8642 2.019249 GGTTATTTTACAGGTCCGGGC 58.981 52.381 0.00 0.00 0.00 6.13
7622 8664 3.243907 CCTTTTACGGGATCTGCTAGAGG 60.244 52.174 0.00 0.00 0.00 3.69
7652 8694 9.601217 TCTTATGTGGCTTCTTTAGAGTATTTC 57.399 33.333 0.00 0.00 0.00 2.17
7660 8702 5.324784 TCTTTAGAGTATTTCGCAGCTCA 57.675 39.130 0.00 0.00 0.00 4.26
7666 8708 3.873952 GAGTATTTCGCAGCTCATTTCCT 59.126 43.478 0.00 0.00 0.00 3.36
8339 9470 5.010719 TCGTGTCCAACAGAATCTCTTTACT 59.989 40.000 0.00 0.00 0.00 2.24
8411 9550 5.653769 ACCAAACATGAGATGGGTGATAAAG 59.346 40.000 16.58 0.00 38.58 1.85
8440 9580 7.407337 GGTTATATGCGGAGTTTCAGTAAAAG 58.593 38.462 0.00 0.00 0.00 2.27
8443 9583 4.339872 TGCGGAGTTTCAGTAAAAGGTA 57.660 40.909 0.00 0.00 0.00 3.08
8452 9592 8.631480 AGTTTCAGTAAAAGGTAGGGTAAATG 57.369 34.615 0.00 0.00 0.00 2.32
8538 9678 2.530460 TGGTGGAATCAAGGGGAATG 57.470 50.000 0.00 0.00 0.00 2.67
8540 9680 1.619432 GGTGGAATCAAGGGGAATGCA 60.619 52.381 0.00 0.00 0.00 3.96
8661 9826 0.234884 GTTAGAACAGGCACACGCAC 59.765 55.000 0.00 0.00 41.24 5.34
8663 9828 0.878523 TAGAACAGGCACACGCACAC 60.879 55.000 0.00 0.00 41.24 3.82
8674 9839 1.668751 ACACGCACACACAAAAGTAGG 59.331 47.619 0.00 0.00 0.00 3.18
8681 9846 3.692101 CACACACAAAAGTAGGTGGACAA 59.308 43.478 0.00 0.00 39.31 3.18
8699 9866 6.017109 GTGGACAATAAAGCACATGTATAGGG 60.017 42.308 0.00 0.00 0.00 3.53
8786 9972 9.630098 GTGTATAAATGCATATTGGAAATCCTG 57.370 33.333 0.00 0.00 36.82 3.86
8845 10031 8.616076 CAAGTATAACAAGAGATGGACAAATCC 58.384 37.037 0.00 0.00 46.48 3.01
8861 10047 6.006275 ACAAATCCTATGCTGGACATTAGT 57.994 37.500 0.00 0.00 40.38 2.24
8866 10052 8.854614 AATCCTATGCTGGACATTAGTAATTC 57.145 34.615 0.00 0.00 40.38 2.17
8867 10053 6.455647 TCCTATGCTGGACATTAGTAATTCG 58.544 40.000 0.00 0.00 40.38 3.34
8869 10055 5.991328 ATGCTGGACATTAGTAATTCGTG 57.009 39.130 0.00 0.00 34.40 4.35
8872 10058 4.868171 GCTGGACATTAGTAATTCGTGTCA 59.132 41.667 13.63 3.21 40.60 3.58
8911 10099 6.998968 AAGATTGGAGTTGATGATGAGTTC 57.001 37.500 0.00 0.00 0.00 3.01
8922 10110 5.687780 TGATGATGAGTTCACATATGGCTT 58.312 37.500 7.80 0.00 37.11 4.35
8926 10115 6.124340 TGATGAGTTCACATATGGCTTCAAT 58.876 36.000 7.80 0.00 0.00 2.57
8934 10123 8.416329 GTTCACATATGGCTTCAATATCCTTTT 58.584 33.333 7.80 0.00 0.00 2.27
8935 10124 8.537728 TCACATATGGCTTCAATATCCTTTTT 57.462 30.769 7.80 0.00 0.00 1.94
8966 10155 6.472016 ACAAATACACACATCTCCACATGTA 58.528 36.000 0.00 0.00 35.10 2.29
8967 10156 6.939730 ACAAATACACACATCTCCACATGTAA 59.060 34.615 0.00 0.00 35.10 2.41
8970 10159 8.579850 AATACACACATCTCCACATGTAAAAT 57.420 30.769 0.00 0.00 35.10 1.82
8974 10163 7.665559 ACACACATCTCCACATGTAAAATTAGT 59.334 33.333 0.00 0.00 35.10 2.24
8991 10180 6.803154 AATTAGTAACCTTGCAAGAGACAC 57.197 37.500 28.05 17.71 0.00 3.67
8992 10181 2.755650 AGTAACCTTGCAAGAGACACG 58.244 47.619 28.05 12.03 0.00 4.49
8993 10182 1.194772 GTAACCTTGCAAGAGACACGC 59.805 52.381 28.05 7.20 0.00 5.34
9003 10192 4.023279 TGCAAGAGACACGCAAATAAATGT 60.023 37.500 0.00 0.00 31.46 2.71
9011 10200 8.090250 AGACACGCAAATAAATGTACTTTACA 57.910 30.769 0.00 0.00 43.80 2.41
9012 10201 8.013378 AGACACGCAAATAAATGTACTTTACAC 58.987 33.333 0.00 0.00 42.23 2.90
9058 10247 6.600032 ACAAACAAACACACTACTTCCATGTA 59.400 34.615 0.00 0.00 0.00 2.29
9062 10251 6.482308 ACAAACACACTACTTCCATGTAAGAC 59.518 38.462 4.87 0.00 0.00 3.01
9070 10259 6.710744 ACTACTTCCATGTAAGACCAACTTTG 59.289 38.462 4.87 0.00 39.72 2.77
9075 10264 7.176589 TCCATGTAAGACCAACTTTGTTTTT 57.823 32.000 0.00 0.00 39.72 1.94
9084 10273 8.124808 AGACCAACTTTGTTTTTAAAGGTACA 57.875 30.769 0.00 0.00 40.98 2.90
9119 10309 9.573133 AGACAAAAATGTAACTTCAACTCAAAG 57.427 29.630 0.00 0.00 0.00 2.77
9121 10311 9.353999 ACAAAAATGTAACTTCAACTCAAAGTC 57.646 29.630 0.00 0.00 35.96 3.01
9143 10333 7.217906 AGTCGATCTTGGTTTTAGTTCTCTTT 58.782 34.615 0.00 0.00 0.00 2.52
9149 10339 6.320418 TCTTGGTTTTAGTTCTCTTTCCAACC 59.680 38.462 0.00 0.00 34.24 3.77
9158 10348 5.785940 AGTTCTCTTTCCAACCTACTATGGT 59.214 40.000 0.00 0.00 43.11 3.55
9159 10349 5.934402 TCTCTTTCCAACCTACTATGGTC 57.066 43.478 0.00 0.00 39.83 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.126911 TGCCTTTGAAAAGTAAGGAATGGTTT 60.127 34.615 5.11 0.00 34.39 3.27
25 26 4.898861 TGCCTTTGAAAAGTAAGGAATGGT 59.101 37.500 5.11 0.00 34.39 3.55
26 27 5.230182 GTGCCTTTGAAAAGTAAGGAATGG 58.770 41.667 5.11 0.00 34.39 3.16
31 32 3.383185 TGTGGTGCCTTTGAAAAGTAAGG 59.617 43.478 2.33 0.00 34.20 2.69
35 36 5.606348 TTTATGTGGTGCCTTTGAAAAGT 57.394 34.783 2.33 0.00 34.20 2.66
56 57 9.598517 TGCTTCTGTTTCAAACATTCTTAATTT 57.401 25.926 2.71 0.00 41.26 1.82
77 78 1.270550 CAGGAACCAACCACATGCTTC 59.729 52.381 0.00 0.00 0.00 3.86
83 84 2.303175 GCTTAACAGGAACCAACCACA 58.697 47.619 0.00 0.00 0.00 4.17
84 85 2.303175 TGCTTAACAGGAACCAACCAC 58.697 47.619 0.00 0.00 0.00 4.16
87 88 3.181480 TGCTTTGCTTAACAGGAACCAAC 60.181 43.478 0.00 0.00 28.35 3.77
95 96 6.986118 GCATTATTCTTGCTTTGCTTAACAG 58.014 36.000 0.00 0.00 37.14 3.16
160 161 8.914654 TCGCATATTTTTCTCTTTGTGATTTTG 58.085 29.630 0.00 0.00 0.00 2.44
174 175 9.167239 CAGAAGAATGAGATTCGCATATTTTTC 57.833 33.333 3.19 2.08 43.92 2.29
183 184 3.686726 ACCAACAGAAGAATGAGATTCGC 59.313 43.478 0.00 0.00 43.92 4.70
184 185 4.931601 TGACCAACAGAAGAATGAGATTCG 59.068 41.667 0.00 0.00 43.92 3.34
189 191 5.243981 AGATGTGACCAACAGAAGAATGAG 58.756 41.667 0.00 0.00 43.64 2.90
199 201 3.483808 TTGCTGTAGATGTGACCAACA 57.516 42.857 0.00 0.00 44.79 3.33
224 226 8.450578 TGGCCACTTTTCTATACATATTTCTG 57.549 34.615 0.00 0.00 0.00 3.02
226 228 7.363431 GCTGGCCACTTTTCTATACATATTTC 58.637 38.462 0.00 0.00 0.00 2.17
231 233 3.555966 GGCTGGCCACTTTTCTATACAT 58.444 45.455 0.00 0.00 35.81 2.29
232 234 2.356741 GGGCTGGCCACTTTTCTATACA 60.357 50.000 16.34 0.00 37.98 2.29
238 828 0.827507 TTGAGGGCTGGCCACTTTTC 60.828 55.000 23.25 11.05 37.98 2.29
247 837 0.682209 CCCACAGATTTGAGGGCTGG 60.682 60.000 5.80 0.00 46.27 4.85
262 852 1.539157 CTTTGGAAAGCTCCTCCCAC 58.461 55.000 11.36 0.00 42.94 4.61
268 858 2.616765 GGAGACTCCTTTGGAAAGCTCC 60.617 54.545 14.72 10.92 36.73 4.70
276 866 0.401738 TGGCTTGGAGACTCCTTTGG 59.598 55.000 22.14 10.33 37.46 3.28
294 884 4.144297 TGATTCCCAGAGTCCAAAACTTG 58.856 43.478 0.00 0.00 38.74 3.16
305 895 4.643784 AGCAAAAGCTTATGATTCCCAGAG 59.356 41.667 0.00 0.00 0.00 3.35
344 934 4.156739 CACCCTTGCAGGTTAAGAATCTTC 59.843 45.833 0.00 0.00 38.39 2.87
349 939 1.497286 ACCACCCTTGCAGGTTAAGAA 59.503 47.619 0.00 0.00 38.39 2.52
363 953 4.400120 TGGAAATTTACAGTGTACCACCC 58.600 43.478 1.43 2.18 34.49 4.61
410 1000 1.074951 GCCAACACAAGGCCTAGGT 59.925 57.895 5.16 4.57 46.50 3.08
445 1035 0.670546 GCACTCGGCACTTGCTTCTA 60.671 55.000 0.38 0.00 43.97 2.10
865 1462 2.007608 GGGTTTTTAGGCAGCTAGTCG 58.992 52.381 0.00 0.00 0.00 4.18
866 1463 2.747989 GTGGGTTTTTAGGCAGCTAGTC 59.252 50.000 0.00 0.00 0.00 2.59
878 1481 1.476845 GGCGGATTGGGTGGGTTTTT 61.477 55.000 0.00 0.00 0.00 1.94
903 1506 3.127030 GTCTTATTTTTGCCGACTGAGGG 59.873 47.826 0.00 0.00 0.00 4.30
920 1525 1.904771 CCGATGGTGCTGGGTCTTA 59.095 57.895 0.00 0.00 0.00 2.10
1196 1802 1.361668 GAGCGCGAAATCTCCAAGCA 61.362 55.000 12.10 0.00 0.00 3.91
1321 1993 4.047125 CGGAAGGTGTGGCCCCAT 62.047 66.667 0.00 0.00 38.26 4.00
1372 2044 0.955919 GGCAAGTTCAGTTCCCTCCG 60.956 60.000 0.00 0.00 0.00 4.63
1391 2063 2.890109 GATGCTCCATGCTTCCGCG 61.890 63.158 0.00 0.00 43.37 6.46
1420 2092 0.870307 CGAATGTAACTCCGGCCTCG 60.870 60.000 0.00 0.00 0.00 4.63
1532 2207 5.140454 AGAGGATGTAACTTTGCTGGTTTT 58.860 37.500 0.00 0.00 0.00 2.43
1533 2208 4.729868 AGAGGATGTAACTTTGCTGGTTT 58.270 39.130 0.00 0.00 0.00 3.27
1589 2264 2.542020 TTGGACATCATGACACGTGT 57.458 45.000 23.64 23.64 0.00 4.49
1596 2271 3.544684 CCCGAAGATTTGGACATCATGA 58.455 45.455 0.00 0.00 33.23 3.07
1597 2272 2.620115 CCCCGAAGATTTGGACATCATG 59.380 50.000 0.00 0.00 33.23 3.07
1767 2448 5.316167 AGATATGACCACTGAAGCAACAAA 58.684 37.500 0.00 0.00 0.00 2.83
2028 2718 8.514594 CAAGAATGGCAGACTGTTCTTATAAAA 58.485 33.333 15.41 0.00 38.47 1.52
2042 2732 3.726557 AAGATGGACAAGAATGGCAGA 57.273 42.857 0.00 0.00 35.69 4.26
2077 2767 1.769733 CAACGTGGCCAAAGTCATTG 58.230 50.000 7.24 2.55 38.84 2.82
2078 2768 0.031994 GCAACGTGGCCAAAGTCATT 59.968 50.000 7.24 0.00 0.00 2.57
2134 2824 1.907739 GCAGCCTCTGTATCCACCA 59.092 57.895 0.00 0.00 33.43 4.17
2260 2956 1.804748 GGTTTAGCAGGTTCTGGTTCG 59.195 52.381 4.93 0.00 42.44 3.95
2274 2970 8.466798 CCAAAACTAATGAATACCTGGGTTTAG 58.533 37.037 0.00 2.56 0.00 1.85
2282 2978 9.200817 ACATTATGCCAAAACTAATGAATACCT 57.799 29.630 8.14 0.00 36.69 3.08
2327 3023 6.091441 GCATTTACTCGAGGGCTATATGAAAG 59.909 42.308 18.41 0.00 0.00 2.62
2350 3046 1.409064 CCGAGAAGTACAGCCTATGCA 59.591 52.381 0.00 0.00 41.13 3.96
2424 3124 3.388308 CTGCCTCTTGATCATTACCGAG 58.612 50.000 0.00 0.00 0.00 4.63
2426 3126 1.869767 GCTGCCTCTTGATCATTACCG 59.130 52.381 0.00 0.00 0.00 4.02
2428 3128 3.801698 TCTGCTGCCTCTTGATCATTAC 58.198 45.455 0.00 0.00 0.00 1.89
2551 3251 3.519510 TGGAGCTCAGCTATGGTAGTTTT 59.480 43.478 17.19 0.00 39.88 2.43
2612 3312 4.520111 TGATATTTCTGGGGCGAAATGATG 59.480 41.667 8.56 0.00 42.05 3.07
2618 3318 7.595819 ATTTATTTGATATTTCTGGGGCGAA 57.404 32.000 0.00 0.00 0.00 4.70
2742 3577 6.162079 TCAAACATCACTGCAACTTTTCAAA 58.838 32.000 0.00 0.00 0.00 2.69
2795 3630 6.583806 GTGCAATAACCAGAAGAAAGAATGTG 59.416 38.462 0.00 0.00 0.00 3.21
2852 3687 8.665685 AGAAATTAGAACTTTATACTTGTGCGG 58.334 33.333 0.00 0.00 0.00 5.69
2883 3728 3.882888 TCCCATAAAGATTCACGAATGGC 59.117 43.478 0.00 0.00 33.94 4.40
2900 3745 9.750783 CCTGATCAAAATCTAGATAAATCCCAT 57.249 33.333 5.46 0.00 32.75 4.00
2967 3812 9.891828 TTCAGTTTATAGTAAAACAAGTGCATG 57.108 29.630 0.00 0.00 40.97 4.06
3092 3937 0.909623 ACAGGGTCCCAATTCCTACG 59.090 55.000 11.55 0.00 0.00 3.51
3221 4066 4.189231 AGAAGACAGCACAACGTAAAACT 58.811 39.130 0.00 0.00 0.00 2.66
3261 4106 7.942341 TGGTCTGGACTTAACATTTTGAGTATT 59.058 33.333 0.67 0.00 31.88 1.89
3285 4139 4.577875 AGCAAGAGAAAGAGAAGATGTGG 58.422 43.478 0.00 0.00 0.00 4.17
3409 4264 1.352352 ACATGACAACCAGAGAAGGGG 59.648 52.381 0.00 0.00 0.00 4.79
3412 4267 4.899502 ACCTAACATGACAACCAGAGAAG 58.100 43.478 0.00 0.00 0.00 2.85
3508 4365 1.948834 CATGTCGCATAATGCCTTGGA 59.051 47.619 0.00 0.00 41.12 3.53
3582 4439 3.446873 ACACTCCTGCAGAGATTAGACAG 59.553 47.826 17.39 0.01 46.50 3.51
3809 4666 6.768381 CCCCTAATTCCTATTTGTCTTCTCAC 59.232 42.308 0.00 0.00 0.00 3.51
3815 4672 4.104897 GCTCCCCCTAATTCCTATTTGTCT 59.895 45.833 0.00 0.00 0.00 3.41
3966 4826 6.909909 ACGAACCTTAATGACTGGAAATTTC 58.090 36.000 9.83 9.83 0.00 2.17
4002 4862 5.132648 TGGTAAGTATCCTAGGGTCGAAGTA 59.867 44.000 9.46 0.00 0.00 2.24
4017 4877 5.043657 AGGGGCCAAAAAGTATGGTAAGTAT 60.044 40.000 4.39 0.00 40.23 2.12
4053 4913 6.566197 AATAACATAGCTGAAGGCATTAGC 57.434 37.500 0.00 0.00 44.79 3.09
4086 4946 8.120465 ACAAACAGACGTTCTTACAAAGTTATG 58.880 33.333 0.00 0.00 32.91 1.90
4151 5011 7.327275 GCGTCACAAAATGATAACCAACATAAA 59.673 33.333 0.00 0.00 40.28 1.40
4156 5016 3.602062 CGCGTCACAAAATGATAACCAAC 59.398 43.478 0.00 0.00 40.28 3.77
4163 5023 1.129251 CTCAGCGCGTCACAAAATGAT 59.871 47.619 8.43 0.00 40.28 2.45
4276 5136 9.462606 AACAAACTTAGGGTAGAAATCTTATGG 57.537 33.333 0.00 0.00 0.00 2.74
4372 5232 2.439880 AGGGAGTATAAAAGAGCAGGGC 59.560 50.000 0.00 0.00 0.00 5.19
4373 5233 3.071747 GGAGGGAGTATAAAAGAGCAGGG 59.928 52.174 0.00 0.00 0.00 4.45
4384 5244 6.138263 TCTATTTTGGAACGGAGGGAGTATA 58.862 40.000 0.00 0.00 0.00 1.47
4385 5245 4.966805 TCTATTTTGGAACGGAGGGAGTAT 59.033 41.667 0.00 0.00 0.00 2.12
4386 5246 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
4387 5247 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
4388 5248 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4389 5249 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4390 5250 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4391 5251 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4392 5252 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
4393 5253 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
4394 5254 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
4395 5255 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
4396 5256 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
4397 5257 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
4398 5258 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
4399 5259 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
4400 5260 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
4401 5261 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
4402 5262 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
4403 5263 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
4404 5264 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
4405 5265 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
4406 5266 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
4407 5267 7.506328 AAAGTTAGTACAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 0.00 2.92
4408 5268 8.983702 TTAAAGTTAGTACAAAGTTGGGTCAT 57.016 30.769 0.00 0.00 0.00 3.06
4409 5269 8.983702 ATTAAAGTTAGTACAAAGTTGGGTCA 57.016 30.769 0.00 0.00 0.00 4.02
4411 5271 9.850198 TGTATTAAAGTTAGTACAAAGTTGGGT 57.150 29.630 4.48 0.00 34.32 4.51
4431 5291 9.850198 ACCCAACTTTGTACTAACTTTGTATTA 57.150 29.630 0.00 0.00 0.00 0.98
4432 5292 8.756486 ACCCAACTTTGTACTAACTTTGTATT 57.244 30.769 0.00 0.00 0.00 1.89
4433 5293 7.994334 TGACCCAACTTTGTACTAACTTTGTAT 59.006 33.333 0.00 0.00 0.00 2.29
4434 5294 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
4435 5295 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
4436 5296 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
4437 5297 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
4438 5298 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
4439 5299 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
4440 5300 8.788325 ATTAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
4441 5301 9.802039 AAATTAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
4442 5302 9.226606 CAAATTAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
4443 5303 7.176690 CCAAATTAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
4444 5304 7.175990 TCCAAATTAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
4445 5305 7.235079 TCCAAATTAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
4446 5306 6.074648 TCCAAATTAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
4447 5307 6.588719 TCCAAATTAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
4448 5308 6.294508 CGTTCCAAATTAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
4449 5309 5.183140 CGTTCCAAATTAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
4450 5310 4.700213 CGTTCCAAATTAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
4451 5311 4.142469 CCGTTCCAAATTAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
4452 5312 4.013728 CCGTTCCAAATTAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
4453 5313 3.264706 TCCGTTCCAAATTAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
4454 5314 3.877508 CTCCGTTCCAAATTAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
4455 5315 3.877508 CCTCCGTTCCAAATTAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
4456 5316 3.877508 CCCTCCGTTCCAAATTAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4457 5317 3.778075 TCCCTCCGTTCCAAATTAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4458 5318 4.130118 CTCCCTCCGTTCCAAATTAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4459 5319 3.780850 ACTCCCTCCGTTCCAAATTAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4460 5320 3.178865 ACTCCCTCCGTTCCAAATTAGA 58.821 45.455 0.00 0.00 0.00 2.10
4461 5321 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
4462 5322 4.966805 AGATACTCCCTCCGTTCCAAATTA 59.033 41.667 0.00 0.00 0.00 1.40
4463 5323 3.780850 AGATACTCCCTCCGTTCCAAATT 59.219 43.478 0.00 0.00 0.00 1.82
4464 5324 3.385115 AGATACTCCCTCCGTTCCAAAT 58.615 45.455 0.00 0.00 0.00 2.32
4465 5325 2.764572 GAGATACTCCCTCCGTTCCAAA 59.235 50.000 0.00 0.00 0.00 3.28
4466 5326 2.024273 AGAGATACTCCCTCCGTTCCAA 60.024 50.000 0.00 0.00 0.00 3.53
4467 5327 1.569548 AGAGATACTCCCTCCGTTCCA 59.430 52.381 0.00 0.00 0.00 3.53
4468 5328 2.368311 AGAGATACTCCCTCCGTTCC 57.632 55.000 0.00 0.00 0.00 3.62
4469 5329 4.463070 ACTAAGAGATACTCCCTCCGTTC 58.537 47.826 0.00 0.00 0.00 3.95
4470 5330 4.463070 GACTAAGAGATACTCCCTCCGTT 58.537 47.826 0.00 0.00 0.00 4.44
4471 5331 3.181441 GGACTAAGAGATACTCCCTCCGT 60.181 52.174 0.00 0.00 0.00 4.69
4472 5332 3.181442 TGGACTAAGAGATACTCCCTCCG 60.181 52.174 0.00 0.00 0.00 4.63
4473 5333 4.456662 TGGACTAAGAGATACTCCCTCC 57.543 50.000 0.00 0.00 0.00 4.30
4474 5334 7.463431 TCTTATGGACTAAGAGATACTCCCTC 58.537 42.308 0.00 0.00 40.72 4.30
4475 5335 7.409408 TCTTATGGACTAAGAGATACTCCCT 57.591 40.000 0.00 0.00 40.72 4.20
4476 5336 7.945664 TCTTCTTATGGACTAAGAGATACTCCC 59.054 40.741 0.00 0.00 45.07 4.30
4477 5337 8.927675 TCTTCTTATGGACTAAGAGATACTCC 57.072 38.462 0.00 0.00 45.07 3.85
4491 5351 7.623630 TCAACAACTCATCATCTTCTTATGGA 58.376 34.615 0.00 0.00 0.00 3.41
4518 5378 5.394224 AAAGCTAGAACCGAGGATATAGC 57.606 43.478 15.35 15.35 36.69 2.97
4519 5379 8.113173 ACTTAAAGCTAGAACCGAGGATATAG 57.887 38.462 0.00 0.00 0.00 1.31
4571 5431 5.982890 TCTCAAATCTTGGTCCCATTTTC 57.017 39.130 0.00 0.00 0.00 2.29
4669 5563 1.203237 AGCCTGGCTTTGGTTTTTGT 58.797 45.000 17.22 0.00 33.89 2.83
4681 5575 1.602311 CATCCTGACATTAGCCTGGC 58.398 55.000 11.65 11.65 0.00 4.85
4689 5583 4.218200 TCACATTTTTCGCATCCTGACATT 59.782 37.500 0.00 0.00 0.00 2.71
4748 5648 9.650539 ACTACATAATCTGCAATATCTGTCATC 57.349 33.333 0.00 0.00 0.00 2.92
5006 5963 1.301401 GCCGTGACACTGCCAAGTA 60.301 57.895 10.62 0.00 33.79 2.24
5009 5966 4.228567 TCGCCGTGACACTGCCAA 62.229 61.111 15.30 2.51 0.00 4.52
5024 5981 4.814771 ACTTGACAAAGTAAAAGGAGGTCG 59.185 41.667 0.00 0.00 45.01 4.79
5135 6093 5.659079 TGGGGAGAACAAAACAAATGTTAGT 59.341 36.000 0.00 0.00 40.90 2.24
5241 6202 8.499162 ACTTCAGAAAATTACAGTCAGAATTCG 58.501 33.333 0.00 0.00 0.00 3.34
5426 6387 7.727181 ACTAGTCTGGTGATGTCATAATAACC 58.273 38.462 0.00 0.00 0.00 2.85
5464 6425 9.919348 TTAGTTTGAACTACGAAACAACAATAC 57.081 29.630 3.19 0.00 40.95 1.89
5497 6468 4.759693 TGACCATCCACAGTTTACATGTTC 59.240 41.667 2.30 0.00 0.00 3.18
5525 6496 1.268539 CCACGTTTGAGGTTGAACTGC 60.269 52.381 0.00 0.00 0.00 4.40
5750 6721 2.865551 CAAAGCTTGCACGTCCATTTTT 59.134 40.909 0.00 0.00 0.00 1.94
5751 6722 2.472816 CAAAGCTTGCACGTCCATTTT 58.527 42.857 0.00 0.00 0.00 1.82
5752 6723 2.138596 CAAAGCTTGCACGTCCATTT 57.861 45.000 0.00 0.00 0.00 2.32
5753 6724 3.871775 CAAAGCTTGCACGTCCATT 57.128 47.368 0.00 0.00 0.00 3.16
5763 6734 4.931661 ATATGGAATGAGGCAAAGCTTG 57.068 40.909 0.00 0.00 0.00 4.01
5764 6735 7.094634 CGTAATATATGGAATGAGGCAAAGCTT 60.095 37.037 0.00 0.00 0.00 3.74
5765 6736 6.372659 CGTAATATATGGAATGAGGCAAAGCT 59.627 38.462 0.00 0.00 0.00 3.74
5766 6737 6.371548 TCGTAATATATGGAATGAGGCAAAGC 59.628 38.462 0.00 0.00 0.00 3.51
5767 6738 7.905604 TCGTAATATATGGAATGAGGCAAAG 57.094 36.000 0.00 0.00 0.00 2.77
5768 6739 8.684386 TTTCGTAATATATGGAATGAGGCAAA 57.316 30.769 0.00 0.00 0.00 3.68
5769 6740 8.154203 TCTTTCGTAATATATGGAATGAGGCAA 58.846 33.333 0.00 0.00 0.00 4.52
5770 6741 7.676004 TCTTTCGTAATATATGGAATGAGGCA 58.324 34.615 0.00 0.00 0.00 4.75
5771 6742 7.819900 ACTCTTTCGTAATATATGGAATGAGGC 59.180 37.037 23.46 0.00 41.35 4.70
5772 6743 9.144747 CACTCTTTCGTAATATATGGAATGAGG 57.855 37.037 23.46 16.07 41.35 3.86
5773 6744 9.698309 ACACTCTTTCGTAATATATGGAATGAG 57.302 33.333 21.04 21.04 42.09 2.90
5776 6747 8.774586 GCAACACTCTTTCGTAATATATGGAAT 58.225 33.333 0.00 0.00 0.00 3.01
5777 6748 7.766738 TGCAACACTCTTTCGTAATATATGGAA 59.233 33.333 0.00 0.00 0.00 3.53
5778 6749 7.269316 TGCAACACTCTTTCGTAATATATGGA 58.731 34.615 0.00 0.00 0.00 3.41
5779 6750 7.477144 TGCAACACTCTTTCGTAATATATGG 57.523 36.000 0.00 0.00 0.00 2.74
5780 6751 8.064222 CCTTGCAACACTCTTTCGTAATATATG 58.936 37.037 0.00 0.00 0.00 1.78
5781 6752 7.769044 ACCTTGCAACACTCTTTCGTAATATAT 59.231 33.333 0.00 0.00 0.00 0.86
5782 6753 7.101054 ACCTTGCAACACTCTTTCGTAATATA 58.899 34.615 0.00 0.00 0.00 0.86
5783 6754 5.938125 ACCTTGCAACACTCTTTCGTAATAT 59.062 36.000 0.00 0.00 0.00 1.28
5784 6755 5.302360 ACCTTGCAACACTCTTTCGTAATA 58.698 37.500 0.00 0.00 0.00 0.98
5785 6756 4.134563 ACCTTGCAACACTCTTTCGTAAT 58.865 39.130 0.00 0.00 0.00 1.89
5786 6757 3.537580 ACCTTGCAACACTCTTTCGTAA 58.462 40.909 0.00 0.00 0.00 3.18
5787 6758 3.188159 ACCTTGCAACACTCTTTCGTA 57.812 42.857 0.00 0.00 0.00 3.43
5788 6759 2.038387 ACCTTGCAACACTCTTTCGT 57.962 45.000 0.00 0.00 0.00 3.85
5789 6760 3.131396 ACTACCTTGCAACACTCTTTCG 58.869 45.455 0.00 0.00 0.00 3.46
5790 6761 5.539048 TCTACTACCTTGCAACACTCTTTC 58.461 41.667 0.00 0.00 0.00 2.62
5791 6762 5.546621 TCTACTACCTTGCAACACTCTTT 57.453 39.130 0.00 0.00 0.00 2.52
5792 6763 5.746990 ATCTACTACCTTGCAACACTCTT 57.253 39.130 0.00 0.00 0.00 2.85
5793 6764 7.425224 AATATCTACTACCTTGCAACACTCT 57.575 36.000 0.00 0.00 0.00 3.24
5814 6785 8.564574 CCACAGTTCTTTGTTGTAGCTTAAATA 58.435 33.333 0.00 0.00 0.00 1.40
5819 6790 3.066760 GCCACAGTTCTTTGTTGTAGCTT 59.933 43.478 0.00 0.00 0.00 3.74
5848 6819 0.978146 GCCAGGAGAGTAGGCTTCCA 60.978 60.000 5.78 0.00 44.92 3.53
5849 6820 1.826709 GCCAGGAGAGTAGGCTTCC 59.173 63.158 0.00 0.00 44.92 3.46
5880 6851 0.661020 AAAGCGGTTCGGAACACTTG 59.339 50.000 21.36 9.60 32.01 3.16
5891 6862 0.822121 GGTTCTGGGTGAAAGCGGTT 60.822 55.000 0.00 0.00 36.30 4.44
5906 6877 1.565067 TTAAGACCGAGGAGGGGTTC 58.435 55.000 0.00 0.00 46.96 3.62
5908 6879 1.790818 GATTAAGACCGAGGAGGGGT 58.209 55.000 0.00 0.00 46.96 4.95
5913 6884 3.508793 ACTGAAACGATTAAGACCGAGGA 59.491 43.478 0.00 0.00 0.00 3.71
5932 6903 6.839033 TCGTCTATACCGATATTTGCTACTG 58.161 40.000 0.00 0.00 0.00 2.74
6044 7015 3.274288 CAACCTTCTCCATCTGTTAGGC 58.726 50.000 0.00 0.00 0.00 3.93
6051 7022 1.075601 TTGCCCAACCTTCTCCATCT 58.924 50.000 0.00 0.00 0.00 2.90
6071 7042 5.121105 CCCCTTTTCTGTATACGTTTAGGG 58.879 45.833 16.89 16.89 39.59 3.53
6081 7052 3.644966 TCGATTGCCCCTTTTCTGTAT 57.355 42.857 0.00 0.00 0.00 2.29
6117 7088 2.287009 GGTTCAACTCTTGGCTTTCGTG 60.287 50.000 0.00 0.00 0.00 4.35
6157 7128 7.566760 TGGTGCATGAAACTTAATATGGTAG 57.433 36.000 0.00 0.00 0.00 3.18
6183 7154 6.211584 TCAGCTTGGACTTTCAGTTCTACTAT 59.788 38.462 0.00 0.00 0.00 2.12
6202 7173 1.005215 CCCAACCTTCTCCATCAGCTT 59.995 52.381 0.00 0.00 0.00 3.74
6271 7242 1.889170 GAGAGGGCCACAAAGAAAAGG 59.111 52.381 6.18 0.00 0.00 3.11
6328 7299 2.400399 CAACACATGGAGTAACGTCGT 58.600 47.619 0.00 0.00 0.00 4.34
6342 7313 3.417101 AGTTGACTTTCACACCAACACA 58.583 40.909 0.00 0.00 40.77 3.72
6352 7323 4.724399 TGGATTGGCTTAGTTGACTTTCA 58.276 39.130 0.00 0.00 0.00 2.69
6371 7342 3.748048 GCGATATGCTATGAAAAGCTGGA 59.252 43.478 0.00 0.00 43.19 3.86
6414 7385 5.242838 TCACATTCCAAAATAGGGTGTTGAC 59.757 40.000 0.00 0.00 0.00 3.18
6417 7388 5.279456 GCTTCACATTCCAAAATAGGGTGTT 60.279 40.000 0.00 0.00 0.00 3.32
6425 7396 3.005684 TCGCTTGCTTCACATTCCAAAAT 59.994 39.130 0.00 0.00 0.00 1.82
6444 7415 4.078363 TCCGAAATGTCAAAATCTTCGC 57.922 40.909 0.00 0.00 38.00 4.70
6457 7429 1.153086 CCTGGGCTCCTCCGAAATG 60.153 63.158 0.00 0.00 34.94 2.32
6488 7462 0.181114 GGCATCTCCCATGCACACTA 59.819 55.000 8.74 0.00 46.21 2.74
6489 7463 1.077212 GGCATCTCCCATGCACACT 60.077 57.895 8.74 0.00 46.21 3.55
6539 7513 6.631238 CGCAATGGTAACCATAATAAAAGACG 59.369 38.462 0.00 0.00 44.40 4.18
6695 7669 9.488762 TCCAAGGACAGTAAAGAGAGAATATTA 57.511 33.333 0.00 0.00 0.00 0.98
6696 7670 8.380742 TCCAAGGACAGTAAAGAGAGAATATT 57.619 34.615 0.00 0.00 0.00 1.28
6697 7671 7.979786 TCCAAGGACAGTAAAGAGAGAATAT 57.020 36.000 0.00 0.00 0.00 1.28
6698 7672 7.979786 ATCCAAGGACAGTAAAGAGAGAATA 57.020 36.000 0.00 0.00 0.00 1.75
6699 7673 6.882768 ATCCAAGGACAGTAAAGAGAGAAT 57.117 37.500 0.00 0.00 0.00 2.40
6701 7675 7.068839 GTCATATCCAAGGACAGTAAAGAGAGA 59.931 40.741 0.00 0.00 0.00 3.10
6702 7676 7.069331 AGTCATATCCAAGGACAGTAAAGAGAG 59.931 40.741 0.00 0.00 34.04 3.20
6704 7678 7.118496 AGTCATATCCAAGGACAGTAAAGAG 57.882 40.000 0.00 0.00 34.04 2.85
6705 7679 7.839705 AGTAGTCATATCCAAGGACAGTAAAGA 59.160 37.037 0.00 0.00 34.04 2.52
6706 7680 8.012957 AGTAGTCATATCCAAGGACAGTAAAG 57.987 38.462 0.00 0.00 34.04 1.85
6708 7682 9.078990 CATAGTAGTCATATCCAAGGACAGTAA 57.921 37.037 0.00 0.00 34.04 2.24
6709 7683 8.225416 ACATAGTAGTCATATCCAAGGACAGTA 58.775 37.037 0.00 0.00 34.04 2.74
6710 7684 7.069986 ACATAGTAGTCATATCCAAGGACAGT 58.930 38.462 0.00 0.00 34.04 3.55
6711 7685 7.309499 GGACATAGTAGTCATATCCAAGGACAG 60.309 44.444 0.00 0.00 40.29 3.51
6712 7686 6.493802 GGACATAGTAGTCATATCCAAGGACA 59.506 42.308 0.00 0.00 40.29 4.02
6713 7687 6.493802 TGGACATAGTAGTCATATCCAAGGAC 59.506 42.308 0.00 0.00 40.29 3.85
6714 7688 6.493802 GTGGACATAGTAGTCATATCCAAGGA 59.506 42.308 0.00 0.00 40.29 3.36
6715 7689 6.495181 AGTGGACATAGTAGTCATATCCAAGG 59.505 42.308 0.00 0.00 40.29 3.61
6716 7690 7.309499 GGAGTGGACATAGTAGTCATATCCAAG 60.309 44.444 0.00 0.00 40.29 3.61
6717 7691 6.493802 GGAGTGGACATAGTAGTCATATCCAA 59.506 42.308 0.00 0.00 40.29 3.53
6718 7692 6.010850 GGAGTGGACATAGTAGTCATATCCA 58.989 44.000 0.00 0.00 40.29 3.41
6719 7693 6.249951 AGGAGTGGACATAGTAGTCATATCC 58.750 44.000 0.00 0.00 40.29 2.59
6720 7694 7.768807 AAGGAGTGGACATAGTAGTCATATC 57.231 40.000 0.00 0.00 40.29 1.63
6721 7695 8.554490 AAAAGGAGTGGACATAGTAGTCATAT 57.446 34.615 0.00 0.00 40.29 1.78
6722 7696 7.973048 AAAAGGAGTGGACATAGTAGTCATA 57.027 36.000 0.00 0.00 40.29 2.15
6723 7697 6.875972 AAAAGGAGTGGACATAGTAGTCAT 57.124 37.500 0.00 0.00 40.29 3.06
6724 7698 6.681729 AAAAAGGAGTGGACATAGTAGTCA 57.318 37.500 0.00 0.00 40.29 3.41
6745 7719 7.165485 TCGGAGAAATACTCATGAAGGAAAAA 58.835 34.615 0.00 0.00 46.54 1.94
6746 7720 6.707290 TCGGAGAAATACTCATGAAGGAAAA 58.293 36.000 0.00 0.00 46.54 2.29
6747 7721 6.294361 TCGGAGAAATACTCATGAAGGAAA 57.706 37.500 0.00 0.00 46.54 3.13
6748 7722 5.932619 TCGGAGAAATACTCATGAAGGAA 57.067 39.130 0.00 0.00 46.54 3.36
6749 7723 7.597288 TTATCGGAGAAATACTCATGAAGGA 57.403 36.000 0.00 0.00 46.54 3.36
6750 7724 8.715998 CATTTATCGGAGAAATACTCATGAAGG 58.284 37.037 10.00 0.00 46.54 3.46
6780 7754 6.039717 GGGATCTGCTAGAGATGCTCTAATAG 59.960 46.154 16.99 6.87 46.30 1.73
6834 7808 3.706600 AAGCGTTTTACAGGATACCCA 57.293 42.857 0.00 0.00 33.88 4.51
6887 7861 7.493367 TCTGAAACAAAACGATTTTTATGGGT 58.507 30.769 0.00 0.00 32.90 4.51
6897 7871 4.320494 GCTCCACATCTGAAACAAAACGAT 60.320 41.667 0.00 0.00 0.00 3.73
6964 7938 7.113658 TGTTTTGTTTTCAGGGTGCTTTATA 57.886 32.000 0.00 0.00 0.00 0.98
6988 7962 4.105377 AGCTAGGACCCAATTGCAATCTAT 59.895 41.667 13.38 0.00 0.00 1.98
7181 8194 0.394192 CTGAGGAGCCGCCATTGATA 59.606 55.000 0.00 0.00 40.02 2.15
7480 8493 2.489255 GCTCCCCCTAAAAATAGCCCTC 60.489 54.545 0.00 0.00 0.00 4.30
7481 8494 1.499438 GCTCCCCCTAAAAATAGCCCT 59.501 52.381 0.00 0.00 0.00 5.19
7482 8495 1.499438 AGCTCCCCCTAAAAATAGCCC 59.501 52.381 0.00 0.00 0.00 5.19
7483 8496 2.091830 ACAGCTCCCCCTAAAAATAGCC 60.092 50.000 0.00 0.00 0.00 3.93
7484 8497 3.298686 ACAGCTCCCCCTAAAAATAGC 57.701 47.619 0.00 0.00 0.00 2.97
7486 8499 9.945633 AAAATTATACAGCTCCCCCTAAAAATA 57.054 29.630 0.00 0.00 0.00 1.40
7488 8501 8.673456 AAAAATTATACAGCTCCCCCTAAAAA 57.327 30.769 0.00 0.00 0.00 1.94
7489 8502 9.192642 GTAAAAATTATACAGCTCCCCCTAAAA 57.807 33.333 0.00 0.00 0.00 1.52
7490 8503 7.499895 CGTAAAAATTATACAGCTCCCCCTAAA 59.500 37.037 0.00 0.00 0.00 1.85
7491 8504 6.993902 CGTAAAAATTATACAGCTCCCCCTAA 59.006 38.462 0.00 0.00 0.00 2.69
7572 8614 6.238814 CGGACCTGTAAAATAACCACTGTTTT 60.239 38.462 0.00 0.00 35.87 2.43
7577 8619 3.307904 CCCGGACCTGTAAAATAACCACT 60.308 47.826 0.73 0.00 0.00 4.00
7578 8620 3.011818 CCCGGACCTGTAAAATAACCAC 58.988 50.000 0.73 0.00 0.00 4.16
7579 8621 2.618559 GCCCGGACCTGTAAAATAACCA 60.619 50.000 0.73 0.00 0.00 3.67
7593 8635 2.261430 ATCCCGTAAAAGGCCCGGAC 62.261 60.000 17.79 0.00 44.41 4.79
7597 8639 1.101635 GCAGATCCCGTAAAAGGCCC 61.102 60.000 0.00 0.00 0.00 5.80
7600 8642 3.243907 CCTCTAGCAGATCCCGTAAAAGG 60.244 52.174 0.00 0.00 0.00 3.11
7622 8664 5.178797 TCTAAAGAAGCCACATAAGAGCAC 58.821 41.667 0.00 0.00 0.00 4.40
7652 8694 2.322161 CACAAAAGGAAATGAGCTGCG 58.678 47.619 0.00 0.00 0.00 5.18
7660 8702 6.209391 CCTGACAGATTACCACAAAAGGAAAT 59.791 38.462 3.32 0.00 0.00 2.17
7666 8708 3.820467 CAGCCTGACAGATTACCACAAAA 59.180 43.478 3.32 0.00 0.00 2.44
8006 9133 2.125326 TGGTAGGGGCAGACGATCG 61.125 63.158 14.88 14.88 0.00 3.69
8010 9137 2.683933 AGGTGGTAGGGGCAGACG 60.684 66.667 0.00 0.00 0.00 4.18
8189 9316 7.406151 ACAAGGAAAAGAATCCCCTCTCTATTA 59.594 37.037 0.00 0.00 40.59 0.98
8315 9442 4.336889 AAAGAGATTCTGTTGGACACGA 57.663 40.909 0.00 0.00 0.00 4.35
8317 9444 7.226720 TGAAAGTAAAGAGATTCTGTTGGACAC 59.773 37.037 0.00 0.00 0.00 3.67
8319 9446 7.730364 TGAAAGTAAAGAGATTCTGTTGGAC 57.270 36.000 0.00 0.00 0.00 4.02
8348 9479 7.042950 TCCAAGATGTTTATGCAAAATGATGG 58.957 34.615 0.00 0.00 0.00 3.51
8411 9550 2.256117 AACTCCGCATATAACCCAGC 57.744 50.000 0.00 0.00 0.00 4.85
8440 9580 3.359695 TTGCTCCACATTTACCCTACC 57.640 47.619 0.00 0.00 0.00 3.18
8443 9583 4.017499 ACCTTATTGCTCCACATTTACCCT 60.017 41.667 0.00 0.00 0.00 4.34
8538 9678 0.039256 TGCGAGCACTCCATTTTTGC 60.039 50.000 0.00 0.00 36.45 3.68
8540 9680 1.267806 CTGTGCGAGCACTCCATTTTT 59.732 47.619 25.74 0.00 46.30 1.94
8661 9826 6.627395 TTATTGTCCACCTACTTTTGTGTG 57.373 37.500 0.00 0.00 0.00 3.82
8663 9828 6.149633 GCTTTATTGTCCACCTACTTTTGTG 58.850 40.000 0.00 0.00 0.00 3.33
8674 9839 6.017109 CCCTATACATGTGCTTTATTGTCCAC 60.017 42.308 9.11 0.00 0.00 4.02
8706 9873 9.027129 CGCTCATGTGATTTAATTCAAAATGAT 57.973 29.630 18.20 2.04 33.72 2.45
8717 9884 4.340894 GCACTTCGCTCATGTGATTTAA 57.659 40.909 0.00 0.00 37.77 1.52
8825 10011 6.767902 GCATAGGATTTGTCCATCTCTTGTTA 59.232 38.462 0.00 0.00 0.00 2.41
8845 10031 6.701841 ACACGAATTACTAATGTCCAGCATAG 59.298 38.462 0.00 0.00 36.67 2.23
8866 10052 9.751542 ATCTTTATAAGTAGGAAAGATGACACG 57.248 33.333 8.00 0.00 44.39 4.49
8901 10089 5.687780 TGAAGCCATATGTGAACTCATCAT 58.312 37.500 1.24 0.00 40.97 2.45
8907 10095 6.845908 AGGATATTGAAGCCATATGTGAACT 58.154 36.000 1.24 0.00 0.00 3.01
8908 10096 7.516198 AAGGATATTGAAGCCATATGTGAAC 57.484 36.000 1.24 0.00 0.00 3.18
8946 10135 8.579850 AATTTTACATGTGGAGATGTGTGTAT 57.420 30.769 9.11 0.00 37.16 2.29
8951 10140 9.988350 GTTACTAATTTTACATGTGGAGATGTG 57.012 33.333 9.11 0.00 37.16 3.21
8952 10141 9.174166 GGTTACTAATTTTACATGTGGAGATGT 57.826 33.333 9.11 2.32 39.87 3.06
8958 10147 7.598278 TGCAAGGTTACTAATTTTACATGTGG 58.402 34.615 9.11 0.00 0.00 4.17
8961 10150 9.559958 CTCTTGCAAGGTTACTAATTTTACATG 57.440 33.333 25.73 0.00 0.00 3.21
8966 10155 7.519970 CGTGTCTCTTGCAAGGTTACTAATTTT 60.520 37.037 25.73 0.00 0.00 1.82
8967 10156 6.073222 CGTGTCTCTTGCAAGGTTACTAATTT 60.073 38.462 25.73 0.00 0.00 1.82
8970 10159 4.304110 CGTGTCTCTTGCAAGGTTACTAA 58.696 43.478 25.73 4.10 0.00 2.24
8974 10163 1.202592 TGCGTGTCTCTTGCAAGGTTA 60.203 47.619 25.73 9.20 35.33 2.85
9003 10192 9.374711 TGATAGATCCCACATATGTGTAAAGTA 57.625 33.333 29.25 17.23 44.21 2.24
9020 10209 9.341899 GTGTGTTTGTTTGTTTATGATAGATCC 57.658 33.333 0.00 0.00 0.00 3.36
9058 10247 8.586744 TGTACCTTTAAAAACAAAGTTGGTCTT 58.413 29.630 0.00 0.00 38.10 3.01
9102 10291 6.513180 AGATCGACTTTGAGTTGAAGTTACA 58.487 36.000 2.37 0.00 41.62 2.41
9103 10292 7.284351 CAAGATCGACTTTGAGTTGAAGTTAC 58.716 38.462 5.07 0.00 41.62 2.50
9104 10293 6.423905 CCAAGATCGACTTTGAGTTGAAGTTA 59.576 38.462 11.23 0.00 41.62 2.24
9105 10294 5.237344 CCAAGATCGACTTTGAGTTGAAGTT 59.763 40.000 11.23 0.00 41.62 2.66
9119 10309 7.360185 GGAAAGAGAACTAAAACCAAGATCGAC 60.360 40.741 0.00 0.00 0.00 4.20
9121 10311 6.426937 TGGAAAGAGAACTAAAACCAAGATCG 59.573 38.462 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.