Multiple sequence alignment - TraesCS2D01G272100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G272100 chr2D 100.000 5224 0 0 1 5224 336513226 336508003 0.000000e+00 9648.0
1 TraesCS2D01G272100 chr2D 89.235 353 15 9 676 1006 73457445 73457796 2.250000e-113 420.0
2 TraesCS2D01G272100 chr2D 85.054 368 40 11 2330 2688 113489303 113489664 1.380000e-95 361.0
3 TraesCS2D01G272100 chr2D 91.866 209 4 2 4780 4988 336508237 336508042 3.980000e-71 279.0
4 TraesCS2D01G272100 chr2D 91.866 209 4 2 4990 5185 336508447 336508239 3.980000e-71 279.0
5 TraesCS2D01G272100 chr2D 93.913 115 4 1 4988 5099 552190006 552189892 2.500000e-38 171.0
6 TraesCS2D01G272100 chr2D 92.500 120 5 2 4988 5104 470226189 470226071 9.000000e-38 169.0
7 TraesCS2D01G272100 chr2D 92.437 119 6 2 4988 5103 561025736 561025618 3.240000e-37 167.0
8 TraesCS2D01G272100 chr2A 95.040 2520 84 22 2092 4586 446670744 446668241 0.000000e+00 3923.0
9 TraesCS2D01G272100 chr2A 92.561 941 32 9 1024 1928 446671911 446670973 0.000000e+00 1315.0
10 TraesCS2D01G272100 chr2A 85.754 358 28 7 676 1011 751674199 751673843 1.790000e-94 357.0
11 TraesCS2D01G272100 chr2A 94.652 187 9 1 1745 1931 446670929 446670744 6.620000e-74 289.0
12 TraesCS2D01G272100 chr2A 92.614 176 10 3 1920 2093 578387543 578387717 3.120000e-62 250.0
13 TraesCS2D01G272100 chr2A 79.870 308 47 10 2392 2688 31879614 31879311 1.470000e-50 211.0
14 TraesCS2D01G272100 chr2A 96.296 108 4 0 5098 5205 446668127 446668020 1.490000e-40 178.0
15 TraesCS2D01G272100 chr2A 95.455 88 4 0 4901 4988 446668127 446668040 1.960000e-29 141.0
16 TraesCS2D01G272100 chr2B 96.114 1827 47 13 2422 4243 404165428 404163621 0.000000e+00 2959.0
17 TraesCS2D01G272100 chr2B 95.539 919 25 5 1024 1932 404166749 404165837 0.000000e+00 1456.0
18 TraesCS2D01G272100 chr2B 91.033 368 16 8 4240 4594 404163539 404163176 1.020000e-131 481.0
19 TraesCS2D01G272100 chr2B 87.571 354 20 9 676 1006 36260082 36259730 6.340000e-104 388.0
20 TraesCS2D01G272100 chr2B 92.692 260 9 6 669 919 307286887 307286629 2.970000e-97 366.0
21 TraesCS2D01G272100 chr2B 93.522 247 14 1 2194 2440 404165840 404165596 2.970000e-97 366.0
22 TraesCS2D01G272100 chr2B 82.065 368 50 11 2331 2688 172222105 172222466 3.060000e-77 300.0
23 TraesCS2D01G272100 chr2B 92.568 148 8 2 5080 5224 404162897 404162750 5.300000e-50 209.0
24 TraesCS2D01G272100 chr2B 93.396 106 7 0 4883 4988 404162897 404162792 1.950000e-34 158.0
25 TraesCS2D01G272100 chr2B 85.496 131 16 1 4780 4910 434723717 434723590 3.280000e-27 134.0
26 TraesCS2D01G272100 chr2B 86.179 123 12 4 4780 4902 561832521 561832638 1.530000e-25 128.0
27 TraesCS2D01G272100 chr2B 86.400 125 6 3 4782 4905 753999048 753998934 5.490000e-25 126.0
28 TraesCS2D01G272100 chr2B 80.000 105 13 5 4565 4668 629868895 629868992 2.610000e-08 71.3
29 TraesCS2D01G272100 chr5B 95.305 639 26 3 1303 1941 610826065 610825431 0.000000e+00 1011.0
30 TraesCS2D01G272100 chr5B 88.539 349 17 10 678 1004 440728003 440727656 8.150000e-108 401.0
31 TraesCS2D01G272100 chr5B 91.736 121 7 2 4988 5105 148500183 148500063 1.160000e-36 165.0
32 TraesCS2D01G272100 chr5B 86.719 128 7 2 4779 4906 665560507 665560390 3.280000e-27 134.0
33 TraesCS2D01G272100 chr3B 94.844 640 31 2 1302 1941 793493699 793494336 0.000000e+00 998.0
34 TraesCS2D01G272100 chr3B 88.148 675 64 12 5 671 742828477 742827811 0.000000e+00 789.0
35 TraesCS2D01G272100 chr3B 85.333 300 22 6 725 1004 675408480 675408777 1.840000e-74 291.0
36 TraesCS2D01G272100 chrUn 93.049 633 42 2 1302 1934 70838571 70839201 0.000000e+00 924.0
37 TraesCS2D01G272100 chrUn 89.762 713 33 12 2 678 320692883 320692175 0.000000e+00 876.0
38 TraesCS2D01G272100 chrUn 94.434 557 29 2 1302 1858 70789946 70790500 0.000000e+00 856.0
39 TraesCS2D01G272100 chrUn 93.210 162 11 0 1932 2093 41734215 41734376 6.760000e-59 239.0
40 TraesCS2D01G272100 chrUn 92.262 168 12 1 1930 2097 34210916 34210750 2.430000e-58 237.0
41 TraesCS2D01G272100 chrUn 92.169 166 13 0 1928 2093 141680911 141680746 8.750000e-58 235.0
42 TraesCS2D01G272100 chrUn 92.593 162 11 1 1932 2093 81477799 81477639 1.130000e-56 231.0
43 TraesCS2D01G272100 chrUn 91.228 171 13 1 1932 2102 96478384 96478216 1.130000e-56 231.0
44 TraesCS2D01G272100 chrUn 92.025 163 13 0 1931 2093 127140185 127140023 4.070000e-56 230.0
45 TraesCS2D01G272100 chrUn 91.975 162 13 0 1932 2093 27078514 27078675 1.460000e-55 228.0
46 TraesCS2D01G272100 chrUn 91.566 166 13 1 1929 2093 95767615 95767450 1.460000e-55 228.0
47 TraesCS2D01G272100 chrUn 91.358 162 14 0 1932 2093 51488976 51489137 6.810000e-54 222.0
48 TraesCS2D01G272100 chrUn 90.964 166 13 2 1932 2096 178663684 178663520 6.810000e-54 222.0
49 TraesCS2D01G272100 chrUn 92.241 116 6 2 4988 5100 11031672 11031787 1.510000e-35 161.0
50 TraesCS2D01G272100 chrUn 91.057 123 6 2 4988 5105 48417745 48417623 1.510000e-35 161.0
51 TraesCS2D01G272100 chrUn 90.756 119 6 2 4988 5102 31528039 31527922 2.520000e-33 154.0
52 TraesCS2D01G272100 chrUn 90.678 118 8 2 4988 5102 74542250 74542133 2.520000e-33 154.0
53 TraesCS2D01G272100 chrUn 90.678 118 8 2 4988 5102 128516392 128516275 2.520000e-33 154.0
54 TraesCS2D01G272100 chrUn 88.976 127 11 2 4988 5111 147284756 147284882 2.520000e-33 154.0
55 TraesCS2D01G272100 chrUn 90.598 117 8 2 4988 5101 87983143 87983259 9.060000e-33 152.0
56 TraesCS2D01G272100 chrUn 89.431 123 8 5 4988 5105 73674342 73674220 3.260000e-32 150.0
57 TraesCS2D01G272100 chrUn 90.435 115 8 1 4988 5099 87248885 87248999 1.170000e-31 148.0
58 TraesCS2D01G272100 chrUn 88.189 127 12 2 4988 5111 147214758 147214884 1.170000e-31 148.0
59 TraesCS2D01G272100 chrUn 88.189 127 12 2 4988 5111 356042930 356043056 1.170000e-31 148.0
60 TraesCS2D01G272100 chrUn 86.290 124 7 1 4780 4903 11031674 11031787 5.490000e-25 126.0
61 TraesCS2D01G272100 chrUn 85.496 131 7 3 4780 4908 48417743 48417623 5.490000e-25 126.0
62 TraesCS2D01G272100 chrUn 85.714 126 8 2 4780 4905 31528037 31527922 1.980000e-24 124.0
63 TraesCS2D01G272100 chrUn 85.600 125 8 1 4780 4904 87983145 87983259 7.100000e-24 122.0
64 TraesCS2D01G272100 chrUn 82.759 145 11 4 4768 4908 73674354 73674220 3.310000e-22 117.0
65 TraesCS2D01G272100 chrUn 84.800 125 9 1 4781 4905 376190140 376190026 3.310000e-22 117.0
66 TraesCS2D01G272100 chrUn 85.124 121 8 2 4785 4905 31527901 31527791 1.190000e-21 115.0
67 TraesCS2D01G272100 chrUn 84.677 124 9 4 4780 4903 66416423 66416536 1.190000e-21 115.0
68 TraesCS2D01G272100 chrUn 82.270 141 13 4 4764 4902 87196384 87196514 1.540000e-20 111.0
69 TraesCS2D01G272100 chrUn 83.871 124 10 4 4780 4903 40465920 40465807 5.530000e-20 110.0
70 TraesCS2D01G272100 chrUn 83.871 124 10 4 4780 4903 319286666 319286779 5.530000e-20 110.0
71 TraesCS2D01G272100 chrUn 83.465 127 11 5 4780 4906 396963016 396963132 5.530000e-20 110.0
72 TraesCS2D01G272100 chrUn 81.046 153 13 7 4767 4917 33215646 33215508 1.990000e-19 108.0
73 TraesCS2D01G272100 chrUn 81.752 137 13 5 4768 4902 118956993 118956867 2.570000e-18 104.0
74 TraesCS2D01G272100 chrUn 95.918 49 2 0 4854 4902 362854026 362854074 4.340000e-11 80.5
75 TraesCS2D01G272100 chrUn 97.059 34 0 1 4783 4815 221193 221226 7.310000e-04 56.5
76 TraesCS2D01G272100 chrUn 92.500 40 2 1 4783 4821 289902 289863 7.310000e-04 56.5
77 TraesCS2D01G272100 chr5D 89.958 707 33 10 2 672 212952257 212952961 0.000000e+00 878.0
78 TraesCS2D01G272100 chr5D 89.958 707 33 10 2 672 213006580 213007284 0.000000e+00 878.0
79 TraesCS2D01G272100 chr5D 89.109 606 28 10 2 571 212926823 212927426 0.000000e+00 719.0
80 TraesCS2D01G272100 chr5D 89.337 347 15 7 678 1004 486789977 486790321 2.910000e-112 416.0
81 TraesCS2D01G272100 chr5D 85.960 349 26 5 674 1000 292678623 292678970 8.320000e-93 351.0
82 TraesCS2D01G272100 chr5D 86.984 315 31 8 2380 2688 137973433 137973743 3.870000e-91 346.0
83 TraesCS2D01G272100 chr5D 94.479 163 9 0 1931 2093 204324446 204324608 8.680000e-63 252.0
84 TraesCS2D01G272100 chr5D 93.452 168 11 0 1929 2096 59947679 59947846 3.120000e-62 250.0
85 TraesCS2D01G272100 chr5D 93.827 162 10 0 1932 2093 53583238 53583077 1.450000e-60 244.0
86 TraesCS2D01G272100 chr5D 93.252 163 11 0 1932 2094 484305155 484304993 1.880000e-59 241.0
87 TraesCS2D01G272100 chr5D 91.736 121 7 1 4988 5105 71806171 71806291 1.160000e-36 165.0
88 TraesCS2D01G272100 chr5D 92.241 116 6 2 4988 5100 361647954 361648069 1.510000e-35 161.0
89 TraesCS2D01G272100 chr5D 85.366 123 8 2 4780 4902 175786694 175786806 9.190000e-23 119.0
90 TraesCS2D01G272100 chr5D 83.740 123 16 4 4780 4902 468291449 468291331 4.280000e-21 113.0
91 TraesCS2D01G272100 chr5D 81.000 100 8 1 4568 4656 12925250 12925349 9.390000e-08 69.4
92 TraesCS2D01G272100 chr3D 89.592 711 37 10 2 678 66146152 66145445 0.000000e+00 869.0
93 TraesCS2D01G272100 chr3D 88.952 353 14 9 677 1006 106163190 106162840 3.760000e-111 412.0
94 TraesCS2D01G272100 chr3D 80.707 368 51 12 2329 2688 11596451 11596806 8.620000e-68 268.0
95 TraesCS2D01G272100 chr3D 92.814 167 11 1 1927 2093 87925996 87926161 1.880000e-59 241.0
96 TraesCS2D01G272100 chr3D 92.308 169 12 1 1925 2093 595024970 595025137 6.760000e-59 239.0
97 TraesCS2D01G272100 chr3D 93.913 115 4 1 4988 5099 267286421 267286535 2.500000e-38 171.0
98 TraesCS2D01G272100 chr3D 90.984 122 7 3 4988 5105 210622435 210622556 1.510000e-35 161.0
99 TraesCS2D01G272100 chr3D 90.400 125 8 3 4988 5109 536894948 536894825 1.510000e-35 161.0
100 TraesCS2D01G272100 chr3D 92.241 116 6 1 4991 5103 537720891 537720776 1.510000e-35 161.0
101 TraesCS2D01G272100 chr3D 90.323 124 7 4 4988 5107 454698748 454698870 1.950000e-34 158.0
102 TraesCS2D01G272100 chr3D 84.058 138 10 4 4767 4902 546651610 546651737 7.100000e-24 122.0
103 TraesCS2D01G272100 chr3D 80.000 135 13 8 4780 4913 47457831 47457952 2.590000e-13 87.9
104 TraesCS2D01G272100 chr3D 79.021 143 18 3 4780 4921 168427212 168427081 2.590000e-13 87.9
105 TraesCS2D01G272100 chr7B 89.047 703 48 12 2 679 688046522 688047220 0.000000e+00 845.0
106 TraesCS2D01G272100 chr7B 86.988 684 64 11 6 673 92376467 92375793 0.000000e+00 747.0
107 TraesCS2D01G272100 chr7B 92.442 172 12 1 1925 2096 176002825 176002995 1.450000e-60 244.0
108 TraesCS2D01G272100 chr7B 83.333 234 29 6 2460 2690 409424173 409424399 1.910000e-49 207.0
109 TraesCS2D01G272100 chr7B 92.437 119 5 3 4988 5102 678632370 678632488 3.240000e-37 167.0
110 TraesCS2D01G272100 chr7B 91.667 120 7 1 4989 5105 18215324 18215443 4.190000e-36 163.0
111 TraesCS2D01G272100 chr7B 91.667 120 6 3 4988 5104 372835096 372834978 4.190000e-36 163.0
112 TraesCS2D01G272100 chr7D 88.777 695 46 16 5 679 57670402 57669720 0.000000e+00 822.0
113 TraesCS2D01G272100 chr7D 88.261 690 53 13 7 679 479654410 479655088 0.000000e+00 800.0
114 TraesCS2D01G272100 chr7D 84.058 138 19 2 4768 4902 573669844 573669981 4.250000e-26 130.0
115 TraesCS2D01G272100 chr7D 86.667 105 13 1 4566 4669 631296492 631296596 1.190000e-21 115.0
116 TraesCS2D01G272100 chr6B 88.362 696 56 11 6 679 63151509 63152201 0.000000e+00 813.0
117 TraesCS2D01G272100 chr6B 82.997 347 33 10 678 1004 510234657 510234317 1.840000e-74 291.0
118 TraesCS2D01G272100 chr6B 95.062 162 7 1 1932 2093 650598540 650598700 2.410000e-63 254.0
119 TraesCS2D01G272100 chr6B 89.231 130 10 3 4988 5114 296399045 296398917 5.410000e-35 159.0
120 TraesCS2D01G272100 chr6B 83.942 137 18 3 4768 4902 36096208 36096342 1.530000e-25 128.0
121 TraesCS2D01G272100 chr6B 84.173 139 10 3 4767 4903 457171797 457171925 1.980000e-24 124.0
122 TraesCS2D01G272100 chr4D 88.051 703 46 20 2 679 98893211 98892522 0.000000e+00 798.0
123 TraesCS2D01G272100 chr4D 93.827 162 10 0 1932 2093 36603208 36603047 1.450000e-60 244.0
124 TraesCS2D01G272100 chr4D 92.857 168 12 0 1930 2097 334164389 334164556 1.450000e-60 244.0
125 TraesCS2D01G272100 chr4D 90.761 184 15 2 1929 2110 465125474 465125291 1.450000e-60 244.0
126 TraesCS2D01G272100 chr4D 92.727 165 12 0 1932 2096 34661688 34661524 6.760000e-59 239.0
127 TraesCS2D01G272100 chr4D 90.909 121 8 2 4988 5105 203442826 203442706 5.410000e-35 159.0
128 TraesCS2D01G272100 chr4D 90.244 123 7 4 4988 5106 427981412 427981291 7.000000e-34 156.0
129 TraesCS2D01G272100 chr4D 84.553 123 9 1 4780 4902 99524704 99524816 4.280000e-21 113.0
130 TraesCS2D01G272100 chr4D 82.443 131 13 4 4780 4910 182003673 182003553 7.150000e-19 106.0
131 TraesCS2D01G272100 chr4D 100.000 38 0 0 4780 4817 500495964 500495927 2.610000e-08 71.3
132 TraesCS2D01G272100 chr1D 87.948 697 54 15 2 679 13966980 13967665 0.000000e+00 795.0
133 TraesCS2D01G272100 chr1D 88.732 355 17 9 672 1004 106979001 106979354 3.760000e-111 412.0
134 TraesCS2D01G272100 chr1D 88.920 352 16 9 676 1005 396916943 396917293 3.760000e-111 412.0
135 TraesCS2D01G272100 chr1D 93.210 162 11 0 1932 2093 338937373 338937212 6.760000e-59 239.0
136 TraesCS2D01G272100 chr1D 93.210 162 11 0 1932 2093 463381905 463382066 6.760000e-59 239.0
137 TraesCS2D01G272100 chr1D 92.169 166 12 1 1929 2093 443117190 443117355 3.150000e-57 233.0
138 TraesCS2D01G272100 chr1D 91.617 167 13 1 1928 2093 324412394 324412228 4.070000e-56 230.0
139 TraesCS2D01G272100 chr1D 92.073 164 12 1 1931 2093 437855214 437855377 4.070000e-56 230.0
140 TraesCS2D01G272100 chr1D 91.525 118 7 2 4988 5102 194139783 194139900 5.410000e-35 159.0
141 TraesCS2D01G272100 chr1D 91.453 117 7 2 4988 5101 418260801 418260685 1.950000e-34 158.0
142 TraesCS2D01G272100 chr1D 90.244 123 9 2 4990 5109 453291701 453291579 1.950000e-34 158.0
143 TraesCS2D01G272100 chr1D 90.164 122 9 2 4988 5106 478911788 478911667 7.000000e-34 156.0
144 TraesCS2D01G272100 chr1D 90.083 121 9 2 4988 5105 140939168 140939048 2.520000e-33 154.0
145 TraesCS2D01G272100 chr1D 90.083 121 9 2 4988 5105 162866887 162866767 2.520000e-33 154.0
146 TraesCS2D01G272100 chr1D 87.097 124 6 3 4779 4902 420745104 420744991 1.180000e-26 132.0
147 TraesCS2D01G272100 chr1D 86.066 122 7 2 4781 4902 416095979 416095868 7.100000e-24 122.0
148 TraesCS2D01G272100 chr1D 83.217 143 12 2 4768 4908 140939180 140939048 2.560000e-23 121.0
149 TraesCS2D01G272100 chr1D 84.496 129 10 1 4780 4908 162866885 162866767 9.190000e-23 119.0
150 TraesCS2D01G272100 chr1D 83.721 129 11 1 4780 4908 41212427 41212309 4.280000e-21 113.0
151 TraesCS2D01G272100 chr1D 83.721 129 10 4 4780 4908 65816143 65816260 1.540000e-20 111.0
152 TraesCS2D01G272100 chr1D 82.946 129 12 1 4780 4908 267928129 267928247 1.990000e-19 108.0
153 TraesCS2D01G272100 chr1D 82.946 129 11 2 4780 4908 57695466 57695583 7.150000e-19 106.0
154 TraesCS2D01G272100 chr1D 83.333 126 7 4 4780 4902 327857443 327857329 2.570000e-18 104.0
155 TraesCS2D01G272100 chr1D 96.000 50 2 0 4854 4903 485744849 485744800 1.210000e-11 82.4
156 TraesCS2D01G272100 chr1D 89.062 64 7 0 4854 4917 255827834 255827897 4.340000e-11 80.5
157 TraesCS2D01G272100 chr1D 87.879 66 6 1 4854 4919 489464969 489464906 5.610000e-10 76.8
158 TraesCS2D01G272100 chr7A 87.717 692 59 11 5 678 705056711 705056028 0.000000e+00 784.0
159 TraesCS2D01G272100 chr1B 85.819 684 77 17 5 678 289089447 289088774 0.000000e+00 708.0
160 TraesCS2D01G272100 chr1B 91.736 121 7 1 4988 5105 294124012 294123892 1.160000e-36 165.0
161 TraesCS2D01G272100 chr1B 92.308 117 6 2 4988 5101 98989888 98990004 4.190000e-36 163.0
162 TraesCS2D01G272100 chr1B 92.241 116 6 1 4988 5100 541701086 541700971 1.510000e-35 161.0
163 TraesCS2D01G272100 chr1B 91.597 119 6 2 4988 5102 621622769 621622651 1.510000e-35 161.0
164 TraesCS2D01G272100 chr1B 90.909 121 8 1 4988 5105 129894431 129894311 5.410000e-35 159.0
165 TraesCS2D01G272100 chr1B 85.401 137 16 2 4768 4902 416282864 416282998 7.050000e-29 139.0
166 TraesCS2D01G272100 chr1B 91.176 102 9 0 4568 4669 547165329 547165430 7.050000e-29 139.0
167 TraesCS2D01G272100 chr1B 82.166 157 14 4 4768 4921 336564716 336564861 7.100000e-24 122.0
168 TraesCS2D01G272100 chr1B 84.496 129 10 2 4780 4908 183691838 183691720 9.190000e-23 119.0
169 TraesCS2D01G272100 chr1B 82.517 143 13 2 4763 4903 457734581 457734713 1.190000e-21 115.0
170 TraesCS2D01G272100 chr1B 82.927 123 15 6 4782 4902 312485841 312485959 7.150000e-19 106.0
171 TraesCS2D01G272100 chr4B 88.889 351 17 9 676 1006 555877082 555877430 3.760000e-111 412.0
172 TraesCS2D01G272100 chr4B 92.442 172 12 1 1927 2097 601790197 601790368 1.450000e-60 244.0
173 TraesCS2D01G272100 chr4B 92.308 117 5 3 4988 5100 14529659 14529775 4.190000e-36 163.0
174 TraesCS2D01G272100 chr4B 92.308 117 5 3 4988 5100 15417044 15417160 4.190000e-36 163.0
175 TraesCS2D01G272100 chr4B 84.962 133 10 1 4780 4912 630045851 630045729 5.490000e-25 126.0
176 TraesCS2D01G272100 chr4B 82.877 146 10 8 4772 4902 55964222 55964077 3.310000e-22 117.0
177 TraesCS2D01G272100 chr6D 88.034 351 19 5 679 1007 121372090 121371741 1.360000e-105 394.0
178 TraesCS2D01G272100 chr6D 85.795 352 17 8 676 1003 266067554 266067212 5.010000e-90 342.0
179 TraesCS2D01G272100 chr6D 95.679 162 6 1 1932 2093 431160668 431160828 5.190000e-65 259.0
180 TraesCS2D01G272100 chr6D 92.727 165 12 0 1929 2093 93646223 93646387 6.760000e-59 239.0
181 TraesCS2D01G272100 chr6D 91.279 172 13 2 1925 2095 409773839 409774009 3.150000e-57 233.0
182 TraesCS2D01G272100 chr6D 91.617 167 14 0 1929 2095 467802268 467802434 1.130000e-56 231.0
183 TraesCS2D01G272100 chr6D 89.560 182 16 3 1913 2093 145462642 145462463 1.460000e-55 228.0
184 TraesCS2D01G272100 chr6D 92.174 115 6 1 4988 5099 272859342 272859228 5.410000e-35 159.0
185 TraesCS2D01G272100 chr6D 92.174 115 6 2 4988 5099 358592943 358593057 5.410000e-35 159.0
186 TraesCS2D01G272100 chr6D 90.833 120 7 3 4988 5103 435990625 435990506 1.950000e-34 158.0
187 TraesCS2D01G272100 chr6D 85.271 129 9 1 4780 4908 137216557 137216439 1.980000e-24 124.0
188 TraesCS2D01G272100 chr6D 85.271 129 9 1 4780 4908 412524865 412524747 1.980000e-24 124.0
189 TraesCS2D01G272100 chr6D 85.156 128 9 1 4781 4908 62556974 62557091 7.100000e-24 122.0
190 TraesCS2D01G272100 chr6D 92.000 75 6 0 4780 4854 75746320 75746246 7.150000e-19 106.0
191 TraesCS2D01G272100 chr6D 82.927 123 11 3 4780 4902 37515003 37515115 9.250000e-18 102.0
192 TraesCS2D01G272100 chr6D 91.525 59 5 0 4854 4912 429841979 429841921 1.210000e-11 82.4
193 TraesCS2D01G272100 chr5A 86.339 366 37 11 2331 2688 185651371 185651011 2.280000e-103 387.0
194 TraesCS2D01G272100 chr5A 84.900 351 29 7 676 1004 688360792 688361140 3.010000e-87 333.0
195 TraesCS2D01G272100 chr5A 94.444 162 9 0 1932 2093 320214244 320214405 3.120000e-62 250.0
196 TraesCS2D01G272100 chr5A 91.011 178 16 0 1932 2109 558675658 558675481 1.880000e-59 241.0
197 TraesCS2D01G272100 chr5A 89.623 106 9 2 4564 4668 236871288 236871184 3.280000e-27 134.0
198 TraesCS2D01G272100 chr5A 100.000 28 0 0 4567 4594 368128502 368128529 9.000000e-03 52.8
199 TraesCS2D01G272100 chr6A 94.737 247 8 2 678 919 118717535 118717289 3.820000e-101 379.0
200 TraesCS2D01G272100 chr6A 92.308 117 6 1 4988 5101 16364053 16364169 4.190000e-36 163.0
201 TraesCS2D01G272100 chr6A 84.672 137 9 3 4768 4902 188860265 188860139 5.490000e-25 126.0
202 TraesCS2D01G272100 chr1A 85.994 357 28 6 676 1011 540294087 540294442 3.850000e-96 363.0
203 TraesCS2D01G272100 chr1A 94.444 162 9 0 1932 2093 39438999 39438838 3.120000e-62 250.0
204 TraesCS2D01G272100 chr1A 92.353 170 11 2 1927 2095 71070761 71070593 1.880000e-59 241.0
205 TraesCS2D01G272100 chr1A 82.482 137 12 3 4768 4902 562179747 562179873 5.530000e-20 110.0
206 TraesCS2D01G272100 chr1A 94.545 55 3 0 4854 4908 276575214 276575268 9.320000e-13 86.1
207 TraesCS2D01G272100 chr4A 91.525 118 7 2 4988 5102 729151854 729151971 5.410000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G272100 chr2D 336508003 336513226 5223 True 9648.000000 9648 100.000000 1 5224 1 chr2D.!!$R1 5223
1 TraesCS2D01G272100 chr2A 446668020 446671911 3891 True 1169.200000 3923 94.800800 1024 5205 5 chr2A.!!$R3 4181
2 TraesCS2D01G272100 chr2B 404162750 404166749 3999 True 938.166667 2959 93.695333 1024 5224 6 chr2B.!!$R5 4200
3 TraesCS2D01G272100 chr5B 610825431 610826065 634 True 1011.000000 1011 95.305000 1303 1941 1 chr5B.!!$R3 638
4 TraesCS2D01G272100 chr3B 793493699 793494336 637 False 998.000000 998 94.844000 1302 1941 1 chr3B.!!$F2 639
5 TraesCS2D01G272100 chr3B 742827811 742828477 666 True 789.000000 789 88.148000 5 671 1 chr3B.!!$R1 666
6 TraesCS2D01G272100 chrUn 70838571 70839201 630 False 924.000000 924 93.049000 1302 1934 1 chrUn.!!$F7 632
7 TraesCS2D01G272100 chrUn 320692175 320692883 708 True 876.000000 876 89.762000 2 678 1 chrUn.!!$R14 676
8 TraesCS2D01G272100 chrUn 70789946 70790500 554 False 856.000000 856 94.434000 1302 1858 1 chrUn.!!$F6 556
9 TraesCS2D01G272100 chr5D 212952257 212952961 704 False 878.000000 878 89.958000 2 672 1 chr5D.!!$F8 670
10 TraesCS2D01G272100 chr5D 213006580 213007284 704 False 878.000000 878 89.958000 2 672 1 chr5D.!!$F9 670
11 TraesCS2D01G272100 chr5D 212926823 212927426 603 False 719.000000 719 89.109000 2 571 1 chr5D.!!$F7 569
12 TraesCS2D01G272100 chr3D 66145445 66146152 707 True 869.000000 869 89.592000 2 678 1 chr3D.!!$R1 676
13 TraesCS2D01G272100 chr7B 688046522 688047220 698 False 845.000000 845 89.047000 2 679 1 chr7B.!!$F5 677
14 TraesCS2D01G272100 chr7B 92375793 92376467 674 True 747.000000 747 86.988000 6 673 1 chr7B.!!$R1 667
15 TraesCS2D01G272100 chr7D 57669720 57670402 682 True 822.000000 822 88.777000 5 679 1 chr7D.!!$R1 674
16 TraesCS2D01G272100 chr7D 479654410 479655088 678 False 800.000000 800 88.261000 7 679 1 chr7D.!!$F1 672
17 TraesCS2D01G272100 chr6B 63151509 63152201 692 False 813.000000 813 88.362000 6 679 1 chr6B.!!$F2 673
18 TraesCS2D01G272100 chr4D 98892522 98893211 689 True 798.000000 798 88.051000 2 679 1 chr4D.!!$R3 677
19 TraesCS2D01G272100 chr1D 13966980 13967665 685 False 795.000000 795 87.948000 2 679 1 chr1D.!!$F1 677
20 TraesCS2D01G272100 chr7A 705056028 705056711 683 True 784.000000 784 87.717000 5 678 1 chr7A.!!$R1 673
21 TraesCS2D01G272100 chr1B 289088774 289089447 673 True 708.000000 708 85.819000 5 678 1 chr1B.!!$R3 673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 734 0.320421 CACGTGTGGGTGTTAGAGGG 60.320 60.000 7.58 0.00 33.24 4.30 F
1009 1061 0.178873 TCCAAGCACCCTCTTACCCT 60.179 55.000 0.00 0.00 0.00 4.34 F
1010 1062 0.253327 CCAAGCACCCTCTTACCCTC 59.747 60.000 0.00 0.00 0.00 4.30 F
1081 1133 0.321298 ACACCGTTTTCCAGATCGGG 60.321 55.000 5.39 5.39 46.06 5.14 F
1702 1795 1.204231 GGACTTAGGACCGTCCAGTTC 59.796 57.143 19.95 10.11 46.98 3.01 F
1708 1801 1.677552 GACCGTCCAGTTCCCACAT 59.322 57.895 0.00 0.00 0.00 3.21 F
2896 3407 2.486472 AGAGTTTGGTCTGATGCCAG 57.514 50.000 0.00 0.00 41.74 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2526 3035 0.615850 CCACCAACCCCTCTCTCTTC 59.384 60.000 0.00 0.0 0.00 2.87 R
2571 3080 8.317891 ACATTATGCGGTATTATTCATTCGAA 57.682 30.769 0.00 0.0 35.05 3.71 R
3075 3587 2.542595 CGAGTATATGTTTTGCGGGTCC 59.457 50.000 0.00 0.0 0.00 4.46 R
3132 3644 7.306983 CCAAAATGAATCTGTTTTCTTCACAGC 60.307 37.037 0.00 0.0 41.37 4.40 R
3769 4285 0.035056 ACATGCCTAGCCCTGTGTTC 60.035 55.000 0.00 0.0 0.00 3.18 R
4125 4641 7.096477 GCAATCAGTTGTACAAATTCAACACTC 60.096 37.037 10.51 0.0 44.08 3.51 R
4690 5303 0.030235 AAAGCCGAAAAAGCGTGTCC 59.970 50.000 0.00 0.0 34.64 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 169 4.035091 GCCGTGTCTATTGCACATGAATTA 59.965 41.667 0.00 0.00 36.71 1.40
259 275 3.773119 ACGGGGAATTAAGAAGCTAGACA 59.227 43.478 0.00 0.00 0.00 3.41
261 277 5.601313 ACGGGGAATTAAGAAGCTAGACATA 59.399 40.000 0.00 0.00 0.00 2.29
309 325 7.975058 TGTCATGATACATGCACTTAAAATTGG 59.025 33.333 0.00 0.00 0.00 3.16
432 451 7.519032 TGGCAACTTTAGTTTAAGCACTATT 57.481 32.000 5.98 0.00 35.83 1.73
434 453 9.069082 TGGCAACTTTAGTTTAAGCACTATTAA 57.931 29.630 5.98 0.00 35.83 1.40
497 546 7.595819 AACATGGGTTTAGTTTTGAAGATCA 57.404 32.000 0.00 0.00 31.83 2.92
504 553 6.292488 GGTTTAGTTTTGAAGATCACGTCGAA 60.292 38.462 0.00 0.00 0.00 3.71
524 573 6.804783 GTCGAAACGGATTTAATGGTGAAAAT 59.195 34.615 0.00 0.00 0.00 1.82
638 690 3.196254 GCAAAATGAATGGTGATGGAGGT 59.804 43.478 0.00 0.00 0.00 3.85
681 733 3.210857 CACGTGTGGGTGTTAGAGG 57.789 57.895 7.58 0.00 33.24 3.69
682 734 0.320421 CACGTGTGGGTGTTAGAGGG 60.320 60.000 7.58 0.00 33.24 4.30
683 735 0.761702 ACGTGTGGGTGTTAGAGGGT 60.762 55.000 0.00 0.00 0.00 4.34
684 736 0.320421 CGTGTGGGTGTTAGAGGGTG 60.320 60.000 0.00 0.00 0.00 4.61
685 737 0.605589 GTGTGGGTGTTAGAGGGTGC 60.606 60.000 0.00 0.00 0.00 5.01
686 738 0.766674 TGTGGGTGTTAGAGGGTGCT 60.767 55.000 0.00 0.00 0.00 4.40
687 739 0.400594 GTGGGTGTTAGAGGGTGCTT 59.599 55.000 0.00 0.00 0.00 3.91
688 740 0.400213 TGGGTGTTAGAGGGTGCTTG 59.600 55.000 0.00 0.00 0.00 4.01
689 741 0.322546 GGGTGTTAGAGGGTGCTTGG 60.323 60.000 0.00 0.00 0.00 3.61
690 742 0.690762 GGTGTTAGAGGGTGCTTGGA 59.309 55.000 0.00 0.00 0.00 3.53
691 743 1.282157 GGTGTTAGAGGGTGCTTGGAT 59.718 52.381 0.00 0.00 0.00 3.41
692 744 2.504175 GGTGTTAGAGGGTGCTTGGATA 59.496 50.000 0.00 0.00 0.00 2.59
693 745 3.532542 GTGTTAGAGGGTGCTTGGATAC 58.467 50.000 0.00 0.00 0.00 2.24
694 746 2.167693 TGTTAGAGGGTGCTTGGATACG 59.832 50.000 0.00 0.00 42.51 3.06
695 747 2.154567 TAGAGGGTGCTTGGATACGT 57.845 50.000 0.00 0.00 42.51 3.57
696 748 1.276622 AGAGGGTGCTTGGATACGTT 58.723 50.000 0.00 0.00 42.51 3.99
697 749 1.628846 AGAGGGTGCTTGGATACGTTT 59.371 47.619 0.00 0.00 42.51 3.60
698 750 2.039879 AGAGGGTGCTTGGATACGTTTT 59.960 45.455 0.00 0.00 42.51 2.43
699 751 3.262405 AGAGGGTGCTTGGATACGTTTTA 59.738 43.478 0.00 0.00 42.51 1.52
700 752 3.606687 AGGGTGCTTGGATACGTTTTAG 58.393 45.455 0.00 0.00 42.51 1.85
701 753 3.008704 AGGGTGCTTGGATACGTTTTAGT 59.991 43.478 0.00 0.00 42.51 2.24
702 754 3.373130 GGGTGCTTGGATACGTTTTAGTC 59.627 47.826 0.00 0.00 42.51 2.59
703 755 3.373130 GGTGCTTGGATACGTTTTAGTCC 59.627 47.826 0.00 0.00 42.51 3.85
704 756 3.373130 GTGCTTGGATACGTTTTAGTCCC 59.627 47.826 0.00 0.00 42.51 4.46
705 757 3.008157 TGCTTGGATACGTTTTAGTCCCA 59.992 43.478 0.00 0.00 42.51 4.37
706 758 4.196971 GCTTGGATACGTTTTAGTCCCAT 58.803 43.478 0.00 0.00 42.51 4.00
707 759 4.035208 GCTTGGATACGTTTTAGTCCCATG 59.965 45.833 0.00 0.00 42.51 3.66
708 760 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
709 761 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
711 763 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
722 774 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
725 777 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
726 778 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
727 779 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
728 780 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
729 781 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
730 782 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
731 783 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
732 784 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
733 785 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
734 786 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
735 787 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
736 788 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
737 789 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
738 790 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
739 791 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
740 792 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
741 793 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
742 794 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
743 795 4.518249 GGACTAAAACTTGCTAGCCTCAT 58.482 43.478 13.29 0.00 0.00 2.90
744 796 4.572795 GGACTAAAACTTGCTAGCCTCATC 59.427 45.833 13.29 0.00 0.00 2.92
745 797 4.518249 ACTAAAACTTGCTAGCCTCATCC 58.482 43.478 13.29 0.00 0.00 3.51
746 798 3.439857 AAAACTTGCTAGCCTCATCCA 57.560 42.857 13.29 0.00 0.00 3.41
747 799 3.659183 AAACTTGCTAGCCTCATCCAT 57.341 42.857 13.29 0.00 0.00 3.41
748 800 2.634815 ACTTGCTAGCCTCATCCATG 57.365 50.000 13.29 0.00 0.00 3.66
749 801 1.236628 CTTGCTAGCCTCATCCATGC 58.763 55.000 13.29 0.00 0.00 4.06
750 802 0.841961 TTGCTAGCCTCATCCATGCT 59.158 50.000 13.29 0.00 39.10 3.79
751 803 0.841961 TGCTAGCCTCATCCATGCTT 59.158 50.000 13.29 0.00 36.57 3.91
752 804 1.236628 GCTAGCCTCATCCATGCTTG 58.763 55.000 2.29 0.00 36.57 4.01
753 805 1.893544 CTAGCCTCATCCATGCTTGG 58.106 55.000 12.41 12.41 45.15 3.61
767 819 6.713762 CCATGCTTGGATCCAAATACTAAA 57.286 37.500 26.87 8.81 46.92 1.85
768 820 6.742109 CCATGCTTGGATCCAAATACTAAAG 58.258 40.000 26.87 14.21 46.92 1.85
769 821 6.547141 CCATGCTTGGATCCAAATACTAAAGA 59.453 38.462 26.87 1.90 46.92 2.52
770 822 7.255381 CCATGCTTGGATCCAAATACTAAAGAG 60.255 40.741 26.87 12.80 46.92 2.85
771 823 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
772 824 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
773 825 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
774 826 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
792 844 9.507329 AAGAGACTAAAATCAAGTTAATGAGCA 57.493 29.630 0.00 0.00 31.76 4.26
793 845 9.678260 AGAGACTAAAATCAAGTTAATGAGCAT 57.322 29.630 0.00 0.00 31.76 3.79
806 858 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
807 859 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
813 865 9.507329 TGAGCATTTATTATCCTCCAAATACTC 57.493 33.333 0.00 0.00 33.93 2.59
814 866 8.870075 AGCATTTATTATCCTCCAAATACTCC 57.130 34.615 0.00 0.00 0.00 3.85
815 867 8.448008 AGCATTTATTATCCTCCAAATACTCCA 58.552 33.333 0.00 0.00 0.00 3.86
816 868 9.077885 GCATTTATTATCCTCCAAATACTCCAA 57.922 33.333 0.00 0.00 0.00 3.53
819 871 9.807921 TTTATTATCCTCCAAATACTCCAATCC 57.192 33.333 0.00 0.00 0.00 3.01
820 872 6.840090 TTATCCTCCAAATACTCCAATCCA 57.160 37.500 0.00 0.00 0.00 3.41
821 873 4.778213 TCCTCCAAATACTCCAATCCAG 57.222 45.455 0.00 0.00 0.00 3.86
822 874 4.370776 TCCTCCAAATACTCCAATCCAGA 58.629 43.478 0.00 0.00 0.00 3.86
823 875 4.788075 TCCTCCAAATACTCCAATCCAGAA 59.212 41.667 0.00 0.00 0.00 3.02
824 876 4.884164 CCTCCAAATACTCCAATCCAGAAC 59.116 45.833 0.00 0.00 0.00 3.01
825 877 5.339530 CCTCCAAATACTCCAATCCAGAACT 60.340 44.000 0.00 0.00 0.00 3.01
826 878 5.745227 TCCAAATACTCCAATCCAGAACTC 58.255 41.667 0.00 0.00 0.00 3.01
827 879 4.572389 CCAAATACTCCAATCCAGAACTCG 59.428 45.833 0.00 0.00 0.00 4.18
828 880 2.961526 TACTCCAATCCAGAACTCGC 57.038 50.000 0.00 0.00 0.00 5.03
829 881 1.270907 ACTCCAATCCAGAACTCGCT 58.729 50.000 0.00 0.00 0.00 4.93
830 882 2.457598 ACTCCAATCCAGAACTCGCTA 58.542 47.619 0.00 0.00 0.00 4.26
831 883 2.832129 ACTCCAATCCAGAACTCGCTAA 59.168 45.455 0.00 0.00 0.00 3.09
832 884 3.260884 ACTCCAATCCAGAACTCGCTAAA 59.739 43.478 0.00 0.00 0.00 1.85
833 885 3.861840 TCCAATCCAGAACTCGCTAAAG 58.138 45.455 0.00 0.00 0.00 1.85
834 886 2.939103 CCAATCCAGAACTCGCTAAAGG 59.061 50.000 0.00 0.00 0.00 3.11
835 887 3.369471 CCAATCCAGAACTCGCTAAAGGA 60.369 47.826 0.00 0.00 0.00 3.36
836 888 3.810310 ATCCAGAACTCGCTAAAGGAG 57.190 47.619 0.00 0.00 37.54 3.69
837 889 2.803956 TCCAGAACTCGCTAAAGGAGA 58.196 47.619 0.00 0.00 35.49 3.71
838 890 2.755655 TCCAGAACTCGCTAAAGGAGAG 59.244 50.000 0.00 0.00 45.38 3.20
839 891 2.159170 CCAGAACTCGCTAAAGGAGAGG 60.159 54.545 0.00 0.00 44.42 3.69
840 892 2.755655 CAGAACTCGCTAAAGGAGAGGA 59.244 50.000 0.00 0.00 44.42 3.71
841 893 3.020984 AGAACTCGCTAAAGGAGAGGAG 58.979 50.000 0.00 0.00 44.42 3.69
842 894 2.517998 ACTCGCTAAAGGAGAGGAGT 57.482 50.000 0.00 0.00 44.42 3.85
843 895 2.810164 ACTCGCTAAAGGAGAGGAGTT 58.190 47.619 0.00 0.00 44.42 3.01
844 896 3.965694 ACTCGCTAAAGGAGAGGAGTTA 58.034 45.455 0.00 0.00 44.42 2.24
845 897 4.342359 ACTCGCTAAAGGAGAGGAGTTAA 58.658 43.478 0.00 0.00 44.42 2.01
846 898 4.771054 ACTCGCTAAAGGAGAGGAGTTAAA 59.229 41.667 0.00 0.00 44.42 1.52
847 899 5.422650 ACTCGCTAAAGGAGAGGAGTTAAAT 59.577 40.000 0.00 0.00 44.42 1.40
848 900 5.661458 TCGCTAAAGGAGAGGAGTTAAATG 58.339 41.667 0.00 0.00 0.00 2.32
849 901 5.421056 TCGCTAAAGGAGAGGAGTTAAATGA 59.579 40.000 0.00 0.00 0.00 2.57
850 902 5.751028 CGCTAAAGGAGAGGAGTTAAATGAG 59.249 44.000 0.00 0.00 0.00 2.90
851 903 6.052360 GCTAAAGGAGAGGAGTTAAATGAGG 58.948 44.000 0.00 0.00 0.00 3.86
852 904 6.127026 GCTAAAGGAGAGGAGTTAAATGAGGA 60.127 42.308 0.00 0.00 0.00 3.71
853 905 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
854 906 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
855 907 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
856 908 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
857 909 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
858 910 5.208121 AGAGGAGTTAAATGAGGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
859 911 5.043732 AGAGGAGTTAAATGAGGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
860 912 4.959839 AGGAGTTAAATGAGGAGAGAGGAC 59.040 45.833 0.00 0.00 0.00 3.85
861 913 4.959839 GGAGTTAAATGAGGAGAGAGGACT 59.040 45.833 0.00 0.00 0.00 3.85
862 914 6.068735 AGGAGTTAAATGAGGAGAGAGGACTA 60.069 42.308 0.00 0.00 0.00 2.59
863 915 6.608002 GGAGTTAAATGAGGAGAGAGGACTAA 59.392 42.308 0.00 0.00 0.00 2.24
864 916 7.289084 GGAGTTAAATGAGGAGAGAGGACTAAT 59.711 40.741 0.00 0.00 0.00 1.73
865 917 8.245195 AGTTAAATGAGGAGAGAGGACTAATC 57.755 38.462 0.00 0.00 0.00 1.75
866 918 7.289084 AGTTAAATGAGGAGAGAGGACTAATCC 59.711 40.741 0.00 0.00 46.69 3.01
882 934 8.215954 GGACTAATCCATATTTTAGTAGGGGT 57.784 38.462 0.00 0.00 45.47 4.95
883 935 9.330220 GGACTAATCCATATTTTAGTAGGGGTA 57.670 37.037 0.00 0.00 45.47 3.69
885 937 9.109246 ACTAATCCATATTTTAGTAGGGGTACC 57.891 37.037 2.17 2.17 41.38 3.34
935 987 6.681729 ACTAGTTAGTCAGGGATGTTTGAA 57.318 37.500 0.00 0.00 0.00 2.69
936 988 7.074653 ACTAGTTAGTCAGGGATGTTTGAAA 57.925 36.000 0.00 0.00 0.00 2.69
937 989 7.514721 ACTAGTTAGTCAGGGATGTTTGAAAA 58.485 34.615 0.00 0.00 0.00 2.29
938 990 6.635030 AGTTAGTCAGGGATGTTTGAAAAC 57.365 37.500 0.00 0.00 39.33 2.43
939 991 6.365520 AGTTAGTCAGGGATGTTTGAAAACT 58.634 36.000 7.39 0.00 39.59 2.66
940 992 6.833933 AGTTAGTCAGGGATGTTTGAAAACTT 59.166 34.615 7.39 1.17 39.59 2.66
941 993 7.342026 AGTTAGTCAGGGATGTTTGAAAACTTT 59.658 33.333 7.39 0.00 39.59 2.66
942 994 8.626526 GTTAGTCAGGGATGTTTGAAAACTTTA 58.373 33.333 7.39 0.00 39.59 1.85
943 995 7.654022 AGTCAGGGATGTTTGAAAACTTTAA 57.346 32.000 7.39 0.00 39.59 1.52
944 996 7.489160 AGTCAGGGATGTTTGAAAACTTTAAC 58.511 34.615 7.39 0.00 39.59 2.01
945 997 6.700081 GTCAGGGATGTTTGAAAACTTTAACC 59.300 38.462 7.39 5.62 39.59 2.85
946 998 6.609616 TCAGGGATGTTTGAAAACTTTAACCT 59.390 34.615 7.39 7.35 39.59 3.50
947 999 7.125053 TCAGGGATGTTTGAAAACTTTAACCTT 59.875 33.333 7.39 0.00 39.59 3.50
948 1000 7.768582 CAGGGATGTTTGAAAACTTTAACCTTT 59.231 33.333 7.39 0.00 39.59 3.11
949 1001 8.325787 AGGGATGTTTGAAAACTTTAACCTTTT 58.674 29.630 7.39 0.00 39.59 2.27
950 1002 9.602568 GGGATGTTTGAAAACTTTAACCTTTTA 57.397 29.630 7.39 0.00 39.59 1.52
988 1040 9.720769 TTTAATCAGACTAAAGTAAGTCCCTTG 57.279 33.333 0.54 0.00 45.86 3.61
989 1041 7.554959 AATCAGACTAAAGTAAGTCCCTTGA 57.445 36.000 0.54 0.00 45.86 3.02
990 1042 7.741554 ATCAGACTAAAGTAAGTCCCTTGAT 57.258 36.000 0.54 1.94 45.86 2.57
991 1043 7.171630 TCAGACTAAAGTAAGTCCCTTGATC 57.828 40.000 0.54 0.00 45.86 2.92
992 1044 6.154706 TCAGACTAAAGTAAGTCCCTTGATCC 59.845 42.308 0.54 0.00 45.86 3.36
993 1045 6.023603 AGACTAAAGTAAGTCCCTTGATCCA 58.976 40.000 0.54 0.00 45.86 3.41
994 1046 6.500751 AGACTAAAGTAAGTCCCTTGATCCAA 59.499 38.462 0.54 0.00 45.86 3.53
995 1047 6.712276 ACTAAAGTAAGTCCCTTGATCCAAG 58.288 40.000 0.00 0.00 40.75 3.61
996 1048 3.636153 AGTAAGTCCCTTGATCCAAGC 57.364 47.619 1.39 0.00 39.85 4.01
997 1049 2.912956 AGTAAGTCCCTTGATCCAAGCA 59.087 45.455 1.39 0.00 39.85 3.91
998 1050 2.206576 AAGTCCCTTGATCCAAGCAC 57.793 50.000 1.39 1.26 39.85 4.40
999 1051 0.329596 AGTCCCTTGATCCAAGCACC 59.670 55.000 1.39 0.00 39.85 5.01
1000 1052 0.681243 GTCCCTTGATCCAAGCACCC 60.681 60.000 1.39 0.00 39.85 4.61
1001 1053 0.846427 TCCCTTGATCCAAGCACCCT 60.846 55.000 1.39 0.00 39.85 4.34
1002 1054 0.394899 CCCTTGATCCAAGCACCCTC 60.395 60.000 1.39 0.00 39.85 4.30
1003 1055 0.622665 CCTTGATCCAAGCACCCTCT 59.377 55.000 1.39 0.00 39.85 3.69
1004 1056 1.005215 CCTTGATCCAAGCACCCTCTT 59.995 52.381 1.39 0.00 39.85 2.85
1005 1057 2.239654 CCTTGATCCAAGCACCCTCTTA 59.760 50.000 1.39 0.00 39.85 2.10
1006 1058 3.274288 CTTGATCCAAGCACCCTCTTAC 58.726 50.000 0.00 0.00 34.63 2.34
1007 1059 1.559682 TGATCCAAGCACCCTCTTACC 59.440 52.381 0.00 0.00 0.00 2.85
1008 1060 0.919710 ATCCAAGCACCCTCTTACCC 59.080 55.000 0.00 0.00 0.00 3.69
1009 1061 0.178873 TCCAAGCACCCTCTTACCCT 60.179 55.000 0.00 0.00 0.00 4.34
1010 1062 0.253327 CCAAGCACCCTCTTACCCTC 59.747 60.000 0.00 0.00 0.00 4.30
1011 1063 1.280457 CAAGCACCCTCTTACCCTCT 58.720 55.000 0.00 0.00 0.00 3.69
1012 1064 1.630878 CAAGCACCCTCTTACCCTCTT 59.369 52.381 0.00 0.00 0.00 2.85
1013 1065 2.838202 CAAGCACCCTCTTACCCTCTTA 59.162 50.000 0.00 0.00 0.00 2.10
1014 1066 2.753247 AGCACCCTCTTACCCTCTTAG 58.247 52.381 0.00 0.00 0.00 2.18
1015 1067 2.044630 AGCACCCTCTTACCCTCTTAGT 59.955 50.000 0.00 0.00 0.00 2.24
1016 1068 2.838813 GCACCCTCTTACCCTCTTAGTT 59.161 50.000 0.00 0.00 0.00 2.24
1017 1069 3.263681 GCACCCTCTTACCCTCTTAGTTT 59.736 47.826 0.00 0.00 0.00 2.66
1018 1070 4.263374 GCACCCTCTTACCCTCTTAGTTTT 60.263 45.833 0.00 0.00 0.00 2.43
1019 1071 5.748139 GCACCCTCTTACCCTCTTAGTTTTT 60.748 44.000 0.00 0.00 0.00 1.94
1020 1072 5.938710 CACCCTCTTACCCTCTTAGTTTTTC 59.061 44.000 0.00 0.00 0.00 2.29
1021 1073 5.013913 ACCCTCTTACCCTCTTAGTTTTTCC 59.986 44.000 0.00 0.00 0.00 3.13
1022 1074 5.176592 CCTCTTACCCTCTTAGTTTTTCCG 58.823 45.833 0.00 0.00 0.00 4.30
1074 1126 0.956410 CGGCCATACACCGTTTTCCA 60.956 55.000 2.24 0.00 45.70 3.53
1081 1133 0.321298 ACACCGTTTTCCAGATCGGG 60.321 55.000 5.39 5.39 46.06 5.14
1168 1224 3.118531 AGATACAACCCAGGCAGAGAAT 58.881 45.455 0.00 0.00 0.00 2.40
1573 1643 1.299648 CTCTTGCCATGGTTCCCGA 59.700 57.895 14.67 2.66 0.00 5.14
1645 1715 4.803613 GTGTGAAATGTTTCTGTTGGAACC 59.196 41.667 6.99 0.00 38.02 3.62
1702 1795 1.204231 GGACTTAGGACCGTCCAGTTC 59.796 57.143 19.95 10.11 46.98 3.01
1708 1801 1.677552 GACCGTCCAGTTCCCACAT 59.322 57.895 0.00 0.00 0.00 3.21
1889 2208 4.213059 GCTCTGTCATTCTTTGCTATAGGC 59.787 45.833 1.04 0.00 42.22 3.93
1941 2260 9.747898 AGTATCAGAAGTATATTACTCCCTCTG 57.252 37.037 7.88 7.88 40.22 3.35
1942 2261 6.902771 TCAGAAGTATATTACTCCCTCTGC 57.097 41.667 8.82 0.00 39.38 4.26
1943 2262 6.615617 TCAGAAGTATATTACTCCCTCTGCT 58.384 40.000 8.82 0.00 39.38 4.24
1944 2263 6.717540 TCAGAAGTATATTACTCCCTCTGCTC 59.282 42.308 8.82 0.00 39.38 4.26
1945 2264 6.014012 AGAAGTATATTACTCCCTCTGCTCC 58.986 44.000 0.00 0.00 38.26 4.70
1946 2265 5.608798 AGTATATTACTCCCTCTGCTCCT 57.391 43.478 0.00 0.00 32.47 3.69
1947 2266 6.721843 AGTATATTACTCCCTCTGCTCCTA 57.278 41.667 0.00 0.00 32.47 2.94
1948 2267 7.104974 AGTATATTACTCCCTCTGCTCCTAA 57.895 40.000 0.00 0.00 32.47 2.69
1949 2268 7.536625 AGTATATTACTCCCTCTGCTCCTAAA 58.463 38.462 0.00 0.00 32.47 1.85
1950 2269 8.180844 AGTATATTACTCCCTCTGCTCCTAAAT 58.819 37.037 0.00 0.00 32.47 1.40
1951 2270 9.476928 GTATATTACTCCCTCTGCTCCTAAATA 57.523 37.037 0.00 0.00 0.00 1.40
1954 2273 8.974292 ATTACTCCCTCTGCTCCTAAATATAA 57.026 34.615 0.00 0.00 0.00 0.98
1955 2274 6.926630 ACTCCCTCTGCTCCTAAATATAAG 57.073 41.667 0.00 0.00 0.00 1.73
1956 2275 6.386284 ACTCCCTCTGCTCCTAAATATAAGT 58.614 40.000 0.00 0.00 0.00 2.24
1957 2276 6.495526 ACTCCCTCTGCTCCTAAATATAAGTC 59.504 42.308 0.00 0.00 0.00 3.01
1958 2277 6.625267 TCCCTCTGCTCCTAAATATAAGTCT 58.375 40.000 0.00 0.00 0.00 3.24
1959 2278 7.076446 TCCCTCTGCTCCTAAATATAAGTCTT 58.924 38.462 0.00 0.00 0.00 3.01
1960 2279 7.569111 TCCCTCTGCTCCTAAATATAAGTCTTT 59.431 37.037 0.00 0.00 0.00 2.52
1961 2280 8.214364 CCCTCTGCTCCTAAATATAAGTCTTTT 58.786 37.037 0.00 0.00 0.00 2.27
1962 2281 9.620259 CCTCTGCTCCTAAATATAAGTCTTTTT 57.380 33.333 0.00 0.00 0.00 1.94
1993 2312 6.894682 TCCAATATGGACTACATACAAAGCA 58.105 36.000 0.00 0.00 42.67 3.91
1994 2313 7.342581 TCCAATATGGACTACATACAAAGCAA 58.657 34.615 0.00 0.00 42.67 3.91
1995 2314 7.831690 TCCAATATGGACTACATACAAAGCAAA 59.168 33.333 0.00 0.00 42.67 3.68
1996 2315 8.465999 CCAATATGGACTACATACAAAGCAAAA 58.534 33.333 0.00 0.00 44.41 2.44
1999 2318 7.701539 ATGGACTACATACAAAGCAAAATGA 57.298 32.000 0.00 0.00 38.26 2.57
2000 2319 7.144722 TGGACTACATACAAAGCAAAATGAG 57.855 36.000 0.00 0.00 0.00 2.90
2001 2320 6.714810 TGGACTACATACAAAGCAAAATGAGT 59.285 34.615 0.00 0.00 0.00 3.41
2002 2321 7.023575 GGACTACATACAAAGCAAAATGAGTG 58.976 38.462 0.00 0.00 0.00 3.51
2003 2322 7.094805 GGACTACATACAAAGCAAAATGAGTGA 60.095 37.037 0.00 0.00 0.00 3.41
2004 2323 8.165239 ACTACATACAAAGCAAAATGAGTGAA 57.835 30.769 0.00 0.00 0.00 3.18
2005 2324 8.796475 ACTACATACAAAGCAAAATGAGTGAAT 58.204 29.630 0.00 0.00 0.00 2.57
2006 2325 9.282247 CTACATACAAAGCAAAATGAGTGAATC 57.718 33.333 0.00 0.00 0.00 2.52
2007 2326 7.889469 ACATACAAAGCAAAATGAGTGAATCT 58.111 30.769 0.00 0.00 0.00 2.40
2008 2327 9.013229 ACATACAAAGCAAAATGAGTGAATCTA 57.987 29.630 0.00 0.00 0.00 1.98
2009 2328 9.282247 CATACAAAGCAAAATGAGTGAATCTAC 57.718 33.333 0.00 0.00 0.00 2.59
2010 2329 7.275888 ACAAAGCAAAATGAGTGAATCTACA 57.724 32.000 0.00 0.00 0.00 2.74
2011 2330 7.141363 ACAAAGCAAAATGAGTGAATCTACAC 58.859 34.615 0.00 0.00 40.60 2.90
2025 2344 8.958506 AGTGAATCTACACTCTAAAATACGTCT 58.041 33.333 0.00 0.00 46.36 4.18
2055 2374 8.780846 ACATCCGTATGTAGTTTGTATTGAAA 57.219 30.769 0.00 0.00 44.66 2.69
2056 2375 9.391006 ACATCCGTATGTAGTTTGTATTGAAAT 57.609 29.630 0.00 0.00 44.66 2.17
2057 2376 9.864034 CATCCGTATGTAGTTTGTATTGAAATC 57.136 33.333 0.00 0.00 0.00 2.17
2058 2377 9.832445 ATCCGTATGTAGTTTGTATTGAAATCT 57.168 29.630 0.00 0.00 0.00 2.40
2059 2378 9.309516 TCCGTATGTAGTTTGTATTGAAATCTC 57.690 33.333 0.00 0.00 0.00 2.75
2060 2379 9.314321 CCGTATGTAGTTTGTATTGAAATCTCT 57.686 33.333 0.00 0.00 0.00 3.10
2090 2409 9.819267 AAGACTTATATTTAGAAACGAAGGGAG 57.181 33.333 0.00 0.00 0.00 4.30
2091 2410 8.979534 AGACTTATATTTAGAAACGAAGGGAGT 58.020 33.333 0.00 0.00 0.00 3.85
2107 2426 4.074970 AGGGAGTACAATTGAAGCAGTTG 58.925 43.478 13.59 0.00 37.16 3.16
2112 2431 5.942872 AGTACAATTGAAGCAGTTGCATAC 58.057 37.500 13.59 0.00 45.16 2.39
2192 2511 8.303780 ACTAAATGGAGGTTAGGTTAGTCTAC 57.696 38.462 0.00 0.00 33.62 2.59
2216 2535 3.598019 TGCCAAAAATCTGGAATGCTC 57.402 42.857 0.00 0.00 38.96 4.26
2343 2668 6.919775 ATTGGGCTTATCTACACTACCTAG 57.080 41.667 0.00 0.00 0.00 3.02
2571 3080 8.747538 AGGAGCAGAAATTATTTAACGGTAAT 57.252 30.769 0.00 0.00 0.00 1.89
2896 3407 2.486472 AGAGTTTGGTCTGATGCCAG 57.514 50.000 0.00 0.00 41.74 4.85
3075 3587 5.621197 TGTCAAACGGGTTTTATCTCATG 57.379 39.130 0.00 0.00 0.00 3.07
3096 3608 2.542595 GGACCCGCAAAACATATACTCG 59.457 50.000 0.00 0.00 0.00 4.18
3132 3644 5.747197 GCCAATGAAGTCTTGATAAGCAATG 59.253 40.000 0.00 0.00 35.59 2.82
3227 3740 9.487790 CCACATATTTTGATTTTTGGTGTTAGT 57.512 29.630 0.00 0.00 0.00 2.24
3360 3873 3.782523 TGGGATTTGGAGCTCATTCTAGT 59.217 43.478 17.19 0.00 0.00 2.57
3456 3969 9.701098 CCTGTTACAAAAGTTACATAGTACTGA 57.299 33.333 5.39 0.00 0.00 3.41
3713 4227 8.664992 AGAGATAGATCATGTACTGAAGGTAGA 58.335 37.037 0.00 0.00 37.44 2.59
3719 4233 4.950475 TCATGTACTGAAGGTAGAGGACTG 59.050 45.833 0.00 0.00 31.25 3.51
3769 4285 9.659830 AAAAAGTGATAAACTAGTAGTTTTGCG 57.340 29.630 28.44 0.00 45.38 4.85
4125 4641 4.696899 TTCAGTACCATGACTGTACTCG 57.303 45.455 12.77 8.31 45.34 4.18
4158 4674 5.673337 TTGTACAACTGATTGCTGAGAAC 57.327 39.130 3.59 0.00 39.66 3.01
4254 4855 9.197306 TGGTCATACTTAGTATGTTACAGATGT 57.803 33.333 25.79 0.00 44.21 3.06
4266 4867 2.888834 ACAGATGTGGTTTGGTTTGC 57.111 45.000 0.00 0.00 0.00 3.68
4282 4883 3.004315 GGTTTGCTCTCGATGGTTTTTGA 59.996 43.478 0.00 0.00 0.00 2.69
4286 4887 3.174375 GCTCTCGATGGTTTTTGAATGC 58.826 45.455 0.00 0.00 0.00 3.56
4287 4888 3.119708 GCTCTCGATGGTTTTTGAATGCT 60.120 43.478 0.00 0.00 0.00 3.79
4288 4889 4.409570 CTCTCGATGGTTTTTGAATGCTG 58.590 43.478 0.00 0.00 0.00 4.41
4289 4890 3.820467 TCTCGATGGTTTTTGAATGCTGT 59.180 39.130 0.00 0.00 0.00 4.40
4290 4891 5.000591 TCTCGATGGTTTTTGAATGCTGTA 58.999 37.500 0.00 0.00 0.00 2.74
4291 4892 5.122239 TCTCGATGGTTTTTGAATGCTGTAG 59.878 40.000 0.00 0.00 0.00 2.74
4316 4929 5.712917 ACCTGTAGTTCAAACTGTTTTGGAA 59.287 36.000 2.41 2.69 42.23 3.53
4336 4949 6.987386 TGGAACTTTTCTGAAAACTTTCACA 58.013 32.000 22.03 17.30 41.88 3.58
4389 5002 7.021790 GCCTACAGCTAAATACAACAAGTTTC 58.978 38.462 0.00 0.00 38.99 2.78
4444 5057 1.939934 CTTGACTGCGTGAACCAAAGA 59.060 47.619 0.00 0.00 0.00 2.52
4514 5127 6.265876 TGTGCCATGATTATGTTGCTATCAAT 59.734 34.615 0.00 0.00 34.29 2.57
4579 5192 1.891150 TGTCAAACTACTCCCTCCGTC 59.109 52.381 0.00 0.00 0.00 4.79
4580 5193 2.169330 GTCAAACTACTCCCTCCGTCT 58.831 52.381 0.00 0.00 0.00 4.18
4581 5194 2.094649 GTCAAACTACTCCCTCCGTCTG 60.095 54.545 0.00 0.00 0.00 3.51
4586 5199 3.236896 ACTACTCCCTCCGTCTGAAAAA 58.763 45.455 0.00 0.00 0.00 1.94
4587 5200 2.841442 ACTCCCTCCGTCTGAAAAAG 57.159 50.000 0.00 0.00 0.00 2.27
4595 5208 2.946990 TCCGTCTGAAAAAGTTTGTCCC 59.053 45.455 3.27 0.00 0.00 4.46
4598 5211 3.127895 CGTCTGAAAAAGTTTGTCCCACA 59.872 43.478 3.27 0.00 0.00 4.17
4613 5226 7.864108 TTGTCCCACAAATGAATGTATCTAG 57.136 36.000 0.00 0.00 34.76 2.43
4615 5228 8.084985 TGTCCCACAAATGAATGTATCTAGTA 57.915 34.615 0.00 0.00 30.84 1.82
4616 5229 7.985184 TGTCCCACAAATGAATGTATCTAGTAC 59.015 37.037 0.00 0.00 30.84 2.73
4620 5233 9.173021 CCACAAATGAATGTATCTAGTACCAAA 57.827 33.333 0.00 0.00 32.03 3.28
4637 5250 8.307582 AGTACCAAATTAGTGCTAGATACAGT 57.692 34.615 0.00 0.00 0.00 3.55
4638 5251 8.414778 AGTACCAAATTAGTGCTAGATACAGTC 58.585 37.037 0.00 0.00 0.00 3.51
4639 5252 7.182817 ACCAAATTAGTGCTAGATACAGTCA 57.817 36.000 0.00 0.00 0.00 3.41
4641 5254 8.267894 ACCAAATTAGTGCTAGATACAGTCATT 58.732 33.333 0.00 0.00 0.00 2.57
4643 5256 9.926751 CAAATTAGTGCTAGATACAGTCATTTG 57.073 33.333 0.00 2.04 36.49 2.32
4645 5258 9.539825 AATTAGTGCTAGATACAGTCATTTGAG 57.460 33.333 0.00 0.00 0.00 3.02
4647 5260 7.175347 AGTGCTAGATACAGTCATTTGAGAA 57.825 36.000 0.00 0.00 0.00 2.87
4650 5263 7.331934 GTGCTAGATACAGTCATTTGAGAAACA 59.668 37.037 0.00 0.00 0.00 2.83
4651 5264 7.877612 TGCTAGATACAGTCATTTGAGAAACAA 59.122 33.333 0.00 0.00 36.65 2.83
4652 5265 8.386606 GCTAGATACAGTCATTTGAGAAACAAG 58.613 37.037 0.00 0.00 39.77 3.16
4653 5266 7.138692 AGATACAGTCATTTGAGAAACAAGC 57.861 36.000 0.00 0.00 39.77 4.01
4654 5267 6.939163 AGATACAGTCATTTGAGAAACAAGCT 59.061 34.615 0.00 0.00 39.77 3.74
4655 5268 5.841957 ACAGTCATTTGAGAAACAAGCTT 57.158 34.783 0.00 0.00 39.77 3.74
4656 5269 5.585390 ACAGTCATTTGAGAAACAAGCTTG 58.415 37.500 24.84 24.84 39.77 4.01
4657 5270 4.980434 CAGTCATTTGAGAAACAAGCTTGG 59.020 41.667 29.18 12.28 39.77 3.61
4659 5272 4.978580 GTCATTTGAGAAACAAGCTTGGAC 59.021 41.667 29.18 17.78 39.77 4.02
4661 5274 4.370364 TTTGAGAAACAAGCTTGGACAC 57.630 40.909 29.18 17.52 39.77 3.67
4662 5275 1.939934 TGAGAAACAAGCTTGGACACG 59.060 47.619 29.18 4.48 0.00 4.49
4664 5277 0.663153 GAAACAAGCTTGGACACGCT 59.337 50.000 29.18 4.47 37.53 5.07
4671 5284 2.572290 AGCTTGGACACGCTTTTTAGT 58.428 42.857 0.00 0.00 31.38 2.24
4672 5285 2.548480 AGCTTGGACACGCTTTTTAGTC 59.452 45.455 0.00 0.00 31.38 2.59
4673 5286 2.289547 GCTTGGACACGCTTTTTAGTCA 59.710 45.455 0.00 0.00 32.79 3.41
4674 5287 3.058224 GCTTGGACACGCTTTTTAGTCAT 60.058 43.478 0.00 0.00 32.79 3.06
4676 5289 5.508200 TTGGACACGCTTTTTAGTCATTT 57.492 34.783 0.00 0.00 32.79 2.32
4678 5291 4.576873 TGGACACGCTTTTTAGTCATTTGA 59.423 37.500 0.00 0.00 32.79 2.69
4679 5292 5.147162 GGACACGCTTTTTAGTCATTTGAG 58.853 41.667 0.00 0.00 32.79 3.02
4680 5293 5.049680 GGACACGCTTTTTAGTCATTTGAGA 60.050 40.000 0.00 0.00 32.79 3.27
4681 5294 6.371809 ACACGCTTTTTAGTCATTTGAGAA 57.628 33.333 0.00 0.00 0.00 2.87
4683 5296 7.425606 ACACGCTTTTTAGTCATTTGAGAAAT 58.574 30.769 0.00 0.00 0.00 2.17
4684 5297 8.564574 ACACGCTTTTTAGTCATTTGAGAAATA 58.435 29.630 0.00 0.00 0.00 1.40
4685 5298 9.393249 CACGCTTTTTAGTCATTTGAGAAATAA 57.607 29.630 0.00 0.00 0.00 1.40
4686 5299 9.612620 ACGCTTTTTAGTCATTTGAGAAATAAG 57.387 29.630 0.00 0.00 0.00 1.73
4687 5300 8.578769 CGCTTTTTAGTCATTTGAGAAATAAGC 58.421 33.333 13.82 13.82 31.64 3.09
4692 5305 8.862325 TTAGTCATTTGAGAAATAAGCTTGGA 57.138 30.769 9.86 0.00 0.00 3.53
4693 5306 7.150783 AGTCATTTGAGAAATAAGCTTGGAC 57.849 36.000 9.86 0.00 0.00 4.02
4694 5307 6.716628 AGTCATTTGAGAAATAAGCTTGGACA 59.283 34.615 9.86 0.00 0.00 4.02
4697 5310 2.742053 TGAGAAATAAGCTTGGACACGC 59.258 45.455 9.86 0.00 0.00 5.34
4698 5311 3.003480 GAGAAATAAGCTTGGACACGCT 58.997 45.455 9.86 0.00 37.53 5.07
4700 5313 3.821033 AGAAATAAGCTTGGACACGCTTT 59.179 39.130 18.98 4.01 42.24 3.51
4702 5315 4.584327 AATAAGCTTGGACACGCTTTTT 57.416 36.364 18.98 14.87 42.24 1.94
4703 5316 2.492019 AAGCTTGGACACGCTTTTTC 57.508 45.000 9.86 0.00 42.24 2.29
4704 5317 0.307760 AGCTTGGACACGCTTTTTCG 59.692 50.000 0.00 0.00 31.38 3.46
4705 5318 0.660300 GCTTGGACACGCTTTTTCGG 60.660 55.000 0.00 0.00 0.00 4.30
4706 5319 0.660300 CTTGGACACGCTTTTTCGGC 60.660 55.000 0.00 0.00 0.00 5.54
4707 5320 1.098712 TTGGACACGCTTTTTCGGCT 61.099 50.000 0.00 0.00 0.00 5.52
4710 5323 1.535226 GGACACGCTTTTTCGGCTTTT 60.535 47.619 0.00 0.00 0.00 2.27
4712 5325 2.190161 ACACGCTTTTTCGGCTTTTTC 58.810 42.857 0.00 0.00 0.00 2.29
4714 5327 0.775861 CGCTTTTTCGGCTTTTTCGG 59.224 50.000 0.00 0.00 0.00 4.30
4716 5329 1.784856 GCTTTTTCGGCTTTTTCGGAC 59.215 47.619 0.00 0.00 0.00 4.79
4722 5362 1.302271 GGCTTTTTCGGACGGAGGT 60.302 57.895 0.00 0.00 0.00 3.85
4728 5368 1.463674 TTTCGGACGGAGGTAGTACC 58.536 55.000 11.73 11.73 38.99 3.34
4766 5406 3.184541 CCTTTCACCGGAACATACTACG 58.815 50.000 9.46 0.00 31.35 3.51
4767 5407 3.367703 CCTTTCACCGGAACATACTACGT 60.368 47.826 9.46 0.00 31.35 3.57
4768 5408 4.142403 CCTTTCACCGGAACATACTACGTA 60.142 45.833 9.46 0.00 31.35 3.57
4769 5409 4.355543 TTCACCGGAACATACTACGTAC 57.644 45.455 9.46 0.00 0.00 3.67
4772 5412 3.624861 CACCGGAACATACTACGTACTCT 59.375 47.826 9.46 0.00 0.00 3.24
4773 5413 3.873952 ACCGGAACATACTACGTACTCTC 59.126 47.826 9.46 0.00 0.00 3.20
4776 5416 5.049167 CGGAACATACTACGTACTCTCTCT 58.951 45.833 0.00 0.00 0.00 3.10
4777 5417 6.212235 CGGAACATACTACGTACTCTCTCTA 58.788 44.000 0.00 0.00 0.00 2.43
4778 5418 6.867816 CGGAACATACTACGTACTCTCTCTAT 59.132 42.308 0.00 0.00 0.00 1.98
4779 5419 7.062138 CGGAACATACTACGTACTCTCTCTATC 59.938 44.444 0.00 0.00 0.00 2.08
4782 5422 9.610705 AACATACTACGTACTCTCTCTATCAAA 57.389 33.333 0.00 0.00 0.00 2.69
4787 5427 9.398538 ACTACGTACTCTCTCTATCAAAATTCT 57.601 33.333 0.00 0.00 0.00 2.40
4789 5429 8.918961 ACGTACTCTCTCTATCAAAATTCTTG 57.081 34.615 0.00 0.00 0.00 3.02
4790 5430 8.524487 ACGTACTCTCTCTATCAAAATTCTTGT 58.476 33.333 0.00 0.00 0.00 3.16
4791 5431 9.015577 CGTACTCTCTCTATCAAAATTCTTGTC 57.984 37.037 0.00 0.00 0.00 3.18
4794 5434 9.434420 ACTCTCTCTATCAAAATTCTTGTCTTG 57.566 33.333 0.00 0.00 0.00 3.02
4795 5435 8.783833 TCTCTCTATCAAAATTCTTGTCTTGG 57.216 34.615 0.00 0.00 0.00 3.61
4796 5436 8.597167 TCTCTCTATCAAAATTCTTGTCTTGGA 58.403 33.333 0.00 0.00 0.00 3.53
4797 5437 9.393512 CTCTCTATCAAAATTCTTGTCTTGGAT 57.606 33.333 0.00 0.00 0.00 3.41
4798 5438 9.745018 TCTCTATCAAAATTCTTGTCTTGGATT 57.255 29.630 0.00 0.00 0.00 3.01
4801 5441 9.918630 CTATCAAAATTCTTGTCTTGGATTTGT 57.081 29.630 0.00 0.00 0.00 2.83
4802 5442 8.822652 ATCAAAATTCTTGTCTTGGATTTGTC 57.177 30.769 0.00 0.00 0.00 3.18
4803 5443 8.010733 TCAAAATTCTTGTCTTGGATTTGTCT 57.989 30.769 0.00 0.00 0.00 3.41
4804 5444 9.130661 TCAAAATTCTTGTCTTGGATTTGTCTA 57.869 29.630 0.00 0.00 0.00 2.59
4805 5445 9.403110 CAAAATTCTTGTCTTGGATTTGTCTAG 57.597 33.333 0.00 0.00 0.00 2.43
4806 5446 8.924511 AAATTCTTGTCTTGGATTTGTCTAGA 57.075 30.769 0.00 0.00 0.00 2.43
4810 5450 9.605275 TTCTTGTCTTGGATTTGTCTAGATATG 57.395 33.333 0.00 0.00 0.00 1.78
4811 5451 8.206867 TCTTGTCTTGGATTTGTCTAGATATGG 58.793 37.037 0.00 0.00 0.00 2.74
4812 5452 7.675161 TGTCTTGGATTTGTCTAGATATGGA 57.325 36.000 0.00 0.00 0.00 3.41
4815 5455 8.153550 GTCTTGGATTTGTCTAGATATGGATGT 58.846 37.037 0.00 0.00 0.00 3.06
4816 5456 9.379770 TCTTGGATTTGTCTAGATATGGATGTA 57.620 33.333 0.00 0.00 0.00 2.29
4889 5529 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4890 5530 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4891 5531 8.923270 ACAAATCTAAGACAAGAATTTTGGGAA 58.077 29.630 0.00 0.00 33.04 3.97
4892 5532 9.762933 CAAATCTAAGACAAGAATTTTGGGAAA 57.237 29.630 5.68 0.00 28.49 3.13
4893 5533 9.987272 AAATCTAAGACAAGAATTTTGGGAAAG 57.013 29.630 5.68 0.00 0.00 2.62
4894 5534 8.940397 ATCTAAGACAAGAATTTTGGGAAAGA 57.060 30.769 5.68 0.00 0.00 2.52
4895 5535 8.396272 TCTAAGACAAGAATTTTGGGAAAGAG 57.604 34.615 5.68 0.00 0.00 2.85
4896 5536 6.410942 AAGACAAGAATTTTGGGAAAGAGG 57.589 37.500 5.68 0.00 0.00 3.69
4897 5537 4.835056 AGACAAGAATTTTGGGAAAGAGGG 59.165 41.667 5.68 0.00 0.00 4.30
4898 5538 4.814967 ACAAGAATTTTGGGAAAGAGGGA 58.185 39.130 5.68 0.00 0.00 4.20
4899 5539 4.835056 ACAAGAATTTTGGGAAAGAGGGAG 59.165 41.667 5.68 0.00 0.00 4.30
4900 5540 4.749048 AGAATTTTGGGAAAGAGGGAGT 57.251 40.909 0.00 0.00 0.00 3.85
4901 5541 5.860648 AGAATTTTGGGAAAGAGGGAGTA 57.139 39.130 0.00 0.00 0.00 2.59
4902 5542 6.408770 AGAATTTTGGGAAAGAGGGAGTAT 57.591 37.500 0.00 0.00 0.00 2.12
4903 5543 7.525158 AGAATTTTGGGAAAGAGGGAGTATA 57.475 36.000 0.00 0.00 0.00 1.47
4904 5544 8.119062 AGAATTTTGGGAAAGAGGGAGTATAT 57.881 34.615 0.00 0.00 0.00 0.86
4905 5545 8.221251 AGAATTTTGGGAAAGAGGGAGTATATC 58.779 37.037 0.00 0.00 0.00 1.63
4906 5546 6.901615 TTTTGGGAAAGAGGGAGTATATCA 57.098 37.500 0.00 0.00 0.00 2.15
4907 5547 7.465900 TTTTGGGAAAGAGGGAGTATATCAT 57.534 36.000 0.00 0.00 0.00 2.45
4908 5548 8.575736 TTTTGGGAAAGAGGGAGTATATCATA 57.424 34.615 0.00 0.00 0.00 2.15
4909 5549 7.798710 TTGGGAAAGAGGGAGTATATCATAG 57.201 40.000 0.00 0.00 0.00 2.23
4910 5550 6.875469 TGGGAAAGAGGGAGTATATCATAGT 58.125 40.000 0.00 0.00 0.00 2.12
4911 5551 6.726299 TGGGAAAGAGGGAGTATATCATAGTG 59.274 42.308 0.00 0.00 0.00 2.74
4912 5552 6.954684 GGGAAAGAGGGAGTATATCATAGTGA 59.045 42.308 0.00 0.00 0.00 3.41
4913 5553 7.621683 GGGAAAGAGGGAGTATATCATAGTGAT 59.378 40.741 0.00 0.00 40.72 3.06
4914 5554 8.474025 GGAAAGAGGGAGTATATCATAGTGATG 58.526 40.741 2.82 0.00 37.70 3.07
4915 5555 8.964533 AAAGAGGGAGTATATCATAGTGATGT 57.035 34.615 2.82 0.00 37.70 3.06
4916 5556 8.588290 AAGAGGGAGTATATCATAGTGATGTC 57.412 38.462 2.82 0.00 37.70 3.06
4917 5557 7.122715 AGAGGGAGTATATCATAGTGATGTCC 58.877 42.308 2.82 4.10 37.70 4.02
4918 5558 6.805150 AGGGAGTATATCATAGTGATGTCCA 58.195 40.000 2.82 0.00 37.70 4.02
4919 5559 7.248976 AGGGAGTATATCATAGTGATGTCCAA 58.751 38.462 2.82 0.00 37.70 3.53
4920 5560 7.734865 AGGGAGTATATCATAGTGATGTCCAAA 59.265 37.037 2.82 0.00 37.70 3.28
4921 5561 8.037758 GGGAGTATATCATAGTGATGTCCAAAG 58.962 40.741 2.82 0.00 37.70 2.77
4922 5562 8.037758 GGAGTATATCATAGTGATGTCCAAAGG 58.962 40.741 2.82 0.00 37.70 3.11
4923 5563 7.911651 AGTATATCATAGTGATGTCCAAAGGG 58.088 38.462 2.82 0.00 37.70 3.95
4924 5564 3.931907 TCATAGTGATGTCCAAAGGGG 57.068 47.619 0.00 0.00 34.41 4.79
4925 5565 3.189606 TCATAGTGATGTCCAAAGGGGT 58.810 45.455 0.00 0.00 38.11 4.95
4926 5566 4.367166 TCATAGTGATGTCCAAAGGGGTA 58.633 43.478 0.00 0.00 38.11 3.69
4927 5567 4.785914 TCATAGTGATGTCCAAAGGGGTAA 59.214 41.667 0.00 0.00 38.11 2.85
4928 5568 3.721087 AGTGATGTCCAAAGGGGTAAG 57.279 47.619 0.00 0.00 38.11 2.34
4929 5569 2.308866 AGTGATGTCCAAAGGGGTAAGG 59.691 50.000 0.00 0.00 38.11 2.69
4930 5570 1.638589 TGATGTCCAAAGGGGTAAGGG 59.361 52.381 0.00 0.00 38.11 3.95
4931 5571 1.920351 GATGTCCAAAGGGGTAAGGGA 59.080 52.381 0.00 0.00 38.11 4.20
4932 5572 1.835895 TGTCCAAAGGGGTAAGGGAA 58.164 50.000 0.00 0.00 38.11 3.97
4933 5573 2.145298 TGTCCAAAGGGGTAAGGGAAA 58.855 47.619 0.00 0.00 38.11 3.13
4934 5574 2.158430 TGTCCAAAGGGGTAAGGGAAAC 60.158 50.000 0.00 0.00 38.11 2.78
4935 5575 2.145298 TCCAAAGGGGTAAGGGAAACA 58.855 47.619 0.00 0.00 38.11 2.83
4936 5576 2.109304 TCCAAAGGGGTAAGGGAAACAG 59.891 50.000 0.00 0.00 38.11 3.16
4937 5577 2.109304 CCAAAGGGGTAAGGGAAACAGA 59.891 50.000 0.00 0.00 0.00 3.41
4938 5578 3.245622 CCAAAGGGGTAAGGGAAACAGAT 60.246 47.826 0.00 0.00 0.00 2.90
4939 5579 3.739401 AAGGGGTAAGGGAAACAGATG 57.261 47.619 0.00 0.00 0.00 2.90
4940 5580 2.644151 AGGGGTAAGGGAAACAGATGT 58.356 47.619 0.00 0.00 0.00 3.06
4941 5581 2.576648 AGGGGTAAGGGAAACAGATGTC 59.423 50.000 0.00 0.00 0.00 3.06
4942 5582 2.576648 GGGGTAAGGGAAACAGATGTCT 59.423 50.000 0.00 0.00 0.00 3.41
4943 5583 3.778629 GGGGTAAGGGAAACAGATGTCTA 59.221 47.826 0.00 0.00 0.00 2.59
4944 5584 4.383880 GGGGTAAGGGAAACAGATGTCTAC 60.384 50.000 0.00 0.00 0.00 2.59
4945 5585 4.470304 GGGTAAGGGAAACAGATGTCTACT 59.530 45.833 0.00 0.00 0.00 2.57
4946 5586 5.659971 GGGTAAGGGAAACAGATGTCTACTA 59.340 44.000 0.00 0.00 0.00 1.82
4947 5587 6.326843 GGGTAAGGGAAACAGATGTCTACTAT 59.673 42.308 0.00 0.00 0.00 2.12
4948 5588 7.508296 GGGTAAGGGAAACAGATGTCTACTATA 59.492 40.741 0.00 0.00 0.00 1.31
4949 5589 8.921205 GGTAAGGGAAACAGATGTCTACTATAA 58.079 37.037 0.00 0.00 0.00 0.98
4950 5590 9.747293 GTAAGGGAAACAGATGTCTACTATAAC 57.253 37.037 0.00 0.00 0.00 1.89
4951 5591 7.362802 AGGGAAACAGATGTCTACTATAACC 57.637 40.000 0.00 0.00 0.00 2.85
4952 5592 6.901300 AGGGAAACAGATGTCTACTATAACCA 59.099 38.462 0.00 0.00 0.00 3.67
4953 5593 7.402071 AGGGAAACAGATGTCTACTATAACCAA 59.598 37.037 0.00 0.00 0.00 3.67
4954 5594 8.044908 GGGAAACAGATGTCTACTATAACCAAA 58.955 37.037 0.00 0.00 0.00 3.28
4955 5595 9.614792 GGAAACAGATGTCTACTATAACCAAAT 57.385 33.333 0.00 0.00 0.00 2.32
4992 5632 9.699410 ATTGAAGAACTATATGATGAACCCAAA 57.301 29.630 0.00 0.00 0.00 3.28
4993 5633 9.527157 TTGAAGAACTATATGATGAACCCAAAA 57.473 29.630 0.00 0.00 0.00 2.44
4994 5634 9.699410 TGAAGAACTATATGATGAACCCAAAAT 57.301 29.630 0.00 0.00 0.00 1.82
4997 5637 9.927081 AGAACTATATGATGAACCCAAAATTCT 57.073 29.630 0.00 0.00 0.00 2.40
5000 5640 9.479549 ACTATATGATGAACCCAAAATTCTTGT 57.520 29.630 0.00 0.00 0.00 3.16
5001 5641 9.956720 CTATATGATGAACCCAAAATTCTTGTC 57.043 33.333 0.00 0.00 0.00 3.18
5002 5642 6.923199 ATGATGAACCCAAAATTCTTGTCT 57.077 33.333 0.00 0.00 0.00 3.41
5003 5643 6.729690 TGATGAACCCAAAATTCTTGTCTT 57.270 33.333 0.00 0.00 0.00 3.01
5004 5644 6.514947 TGATGAACCCAAAATTCTTGTCTTG 58.485 36.000 0.00 0.00 0.00 3.02
5005 5645 5.275067 TGAACCCAAAATTCTTGTCTTGG 57.725 39.130 0.00 0.00 38.45 3.61
5006 5646 4.959210 TGAACCCAAAATTCTTGTCTTGGA 59.041 37.500 5.99 0.00 40.72 3.53
5007 5647 5.602145 TGAACCCAAAATTCTTGTCTTGGAT 59.398 36.000 5.99 0.00 40.72 3.41
5008 5648 6.099557 TGAACCCAAAATTCTTGTCTTGGATT 59.900 34.615 5.99 0.00 40.72 3.01
5009 5649 6.499106 ACCCAAAATTCTTGTCTTGGATTT 57.501 33.333 5.99 0.00 40.72 2.17
5010 5650 6.290605 ACCCAAAATTCTTGTCTTGGATTTG 58.709 36.000 5.99 0.00 40.72 2.32
5011 5651 6.126796 ACCCAAAATTCTTGTCTTGGATTTGT 60.127 34.615 5.99 0.00 40.72 2.83
5012 5652 6.424812 CCCAAAATTCTTGTCTTGGATTTGTC 59.575 38.462 5.99 0.00 40.72 3.18
5013 5653 6.424812 CCAAAATTCTTGTCTTGGATTTGTCC 59.575 38.462 0.00 0.00 40.72 4.02
5014 5654 6.729690 AAATTCTTGTCTTGGATTTGTCCA 57.270 33.333 0.00 0.00 38.14 4.02
5015 5655 5.972107 ATTCTTGTCTTGGATTTGTCCAG 57.028 39.130 0.00 0.00 41.35 3.86
5016 5656 4.705110 TCTTGTCTTGGATTTGTCCAGA 57.295 40.909 0.00 0.00 41.35 3.86
5017 5657 5.246981 TCTTGTCTTGGATTTGTCCAGAT 57.753 39.130 0.00 0.00 41.35 2.90
5018 5658 6.373005 TCTTGTCTTGGATTTGTCCAGATA 57.627 37.500 0.00 0.00 41.35 1.98
5019 5659 6.962182 TCTTGTCTTGGATTTGTCCAGATAT 58.038 36.000 0.00 0.00 41.35 1.63
5020 5660 6.825213 TCTTGTCTTGGATTTGTCCAGATATG 59.175 38.462 0.00 0.00 41.35 1.78
5021 5661 5.439721 TGTCTTGGATTTGTCCAGATATGG 58.560 41.667 0.00 0.00 41.35 2.74
5022 5662 5.044919 TGTCTTGGATTTGTCCAGATATGGT 60.045 40.000 6.21 0.00 41.35 3.55
5023 5663 6.157820 TGTCTTGGATTTGTCCAGATATGGTA 59.842 38.462 6.21 0.00 41.35 3.25
5024 5664 7.147320 TGTCTTGGATTTGTCCAGATATGGTAT 60.147 37.037 6.21 0.00 41.35 2.73
5025 5665 7.721399 GTCTTGGATTTGTCCAGATATGGTATT 59.279 37.037 6.21 0.00 41.35 1.89
5026 5666 8.281531 TCTTGGATTTGTCCAGATATGGTATTT 58.718 33.333 6.21 0.00 41.35 1.40
5027 5667 9.573166 CTTGGATTTGTCCAGATATGGTATTTA 57.427 33.333 6.21 0.00 41.35 1.40
5028 5668 9.928618 TTGGATTTGTCCAGATATGGTATTTAA 57.071 29.630 6.21 0.00 41.35 1.52
5133 5773 3.572682 GTCCAAAGGGGTAAGGAAAACAG 59.427 47.826 0.00 0.00 38.11 3.16
5221 5864 9.429359 CACAAGAATAGTTCCATACATAGGATC 57.571 37.037 0.00 0.00 34.56 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 169 7.446931 TGAAACATACAGTGTAAACATCATGGT 59.553 33.333 7.16 0.00 41.14 3.55
252 268 7.621428 ATTTATGATGCATGGTATGTCTAGC 57.379 36.000 2.46 0.00 0.00 3.42
261 277 9.887629 TGACAATTTTAATTTATGATGCATGGT 57.112 25.926 2.46 0.00 0.00 3.55
285 301 6.979817 GCCAATTTTAAGTGCATGTATCATGA 59.020 34.615 12.98 0.00 0.00 3.07
432 451 2.042464 TGCCCAAAAGTTGCCATGTTA 58.958 42.857 0.00 0.00 0.00 2.41
434 453 0.835941 TTGCCCAAAAGTTGCCATGT 59.164 45.000 0.00 0.00 0.00 3.21
497 546 3.123959 CACCATTAAATCCGTTTCGACGT 59.876 43.478 0.00 0.00 0.00 4.34
504 553 6.597832 TCCATTTTCACCATTAAATCCGTT 57.402 33.333 0.00 0.00 0.00 4.44
638 690 1.825622 TTTGCACATCGCCCACACA 60.826 52.632 0.00 0.00 41.33 3.72
673 725 2.167693 CGTATCCAAGCACCCTCTAACA 59.832 50.000 0.00 0.00 0.00 2.41
679 731 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
680 732 3.340928 ACTAAAACGTATCCAAGCACCC 58.659 45.455 0.00 0.00 0.00 4.61
681 733 3.373130 GGACTAAAACGTATCCAAGCACC 59.627 47.826 0.00 0.00 0.00 5.01
682 734 3.373130 GGGACTAAAACGTATCCAAGCAC 59.627 47.826 0.00 0.00 32.45 4.40
683 735 3.008157 TGGGACTAAAACGTATCCAAGCA 59.992 43.478 0.00 0.00 32.45 3.91
684 736 3.602483 TGGGACTAAAACGTATCCAAGC 58.398 45.455 0.00 0.00 32.45 4.01
685 737 5.293569 GTCATGGGACTAAAACGTATCCAAG 59.706 44.000 0.00 0.00 40.99 3.61
686 738 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
687 739 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
702 754 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
703 755 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
704 756 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
705 757 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
706 758 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
707 759 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
708 760 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
709 761 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
710 762 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
711 763 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
712 764 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
713 765 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
714 766 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
715 767 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
716 768 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
717 769 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
718 770 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
719 771 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
720 772 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
721 773 3.939066 TGAGGCTAGCAAGTTTTAGTCC 58.061 45.455 18.24 0.00 0.00 3.85
722 774 4.572795 GGATGAGGCTAGCAAGTTTTAGTC 59.427 45.833 18.24 1.74 0.00 2.59
723 775 4.019321 TGGATGAGGCTAGCAAGTTTTAGT 60.019 41.667 18.24 0.00 0.00 2.24
724 776 4.517285 TGGATGAGGCTAGCAAGTTTTAG 58.483 43.478 18.24 0.00 0.00 1.85
725 777 4.568072 TGGATGAGGCTAGCAAGTTTTA 57.432 40.909 18.24 0.00 0.00 1.52
726 778 3.439857 TGGATGAGGCTAGCAAGTTTT 57.560 42.857 18.24 0.00 0.00 2.43
727 779 3.285484 CATGGATGAGGCTAGCAAGTTT 58.715 45.455 18.24 0.00 0.00 2.66
728 780 2.928334 CATGGATGAGGCTAGCAAGTT 58.072 47.619 18.24 0.00 0.00 2.66
729 781 1.476471 GCATGGATGAGGCTAGCAAGT 60.476 52.381 18.24 0.00 0.00 3.16
730 782 1.202782 AGCATGGATGAGGCTAGCAAG 60.203 52.381 18.24 0.00 40.84 4.01
731 783 0.841961 AGCATGGATGAGGCTAGCAA 59.158 50.000 18.24 1.28 40.84 3.91
732 784 0.841961 AAGCATGGATGAGGCTAGCA 59.158 50.000 18.24 0.00 42.15 3.49
733 785 1.236628 CAAGCATGGATGAGGCTAGC 58.763 55.000 6.04 6.04 42.15 3.42
745 797 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
746 798 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
747 799 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
748 800 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
766 818 9.507329 TGCTCATTAACTTGATTTTAGTCTCTT 57.493 29.630 0.00 0.00 0.00 2.85
767 819 9.678260 ATGCTCATTAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 0.00 3.10
780 832 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
781 833 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
787 839 9.507329 GAGTATTTGGAGGATAATAAATGCTCA 57.493 33.333 16.35 0.00 44.44 4.26
788 840 8.951243 GGAGTATTTGGAGGATAATAAATGCTC 58.049 37.037 14.22 14.22 44.38 4.26
789 841 8.448008 TGGAGTATTTGGAGGATAATAAATGCT 58.552 33.333 0.00 0.00 37.89 3.79
790 842 8.635765 TGGAGTATTTGGAGGATAATAAATGC 57.364 34.615 0.00 0.00 0.00 3.56
793 845 9.807921 GGATTGGAGTATTTGGAGGATAATAAA 57.192 33.333 0.00 0.00 0.00 1.40
794 846 8.954729 TGGATTGGAGTATTTGGAGGATAATAA 58.045 33.333 0.00 0.00 0.00 1.40
795 847 8.518720 TGGATTGGAGTATTTGGAGGATAATA 57.481 34.615 0.00 0.00 0.00 0.98
796 848 7.295672 TCTGGATTGGAGTATTTGGAGGATAAT 59.704 37.037 0.00 0.00 0.00 1.28
797 849 6.619437 TCTGGATTGGAGTATTTGGAGGATAA 59.381 38.462 0.00 0.00 0.00 1.75
798 850 6.150332 TCTGGATTGGAGTATTTGGAGGATA 58.850 40.000 0.00 0.00 0.00 2.59
799 851 4.977739 TCTGGATTGGAGTATTTGGAGGAT 59.022 41.667 0.00 0.00 0.00 3.24
800 852 4.370776 TCTGGATTGGAGTATTTGGAGGA 58.629 43.478 0.00 0.00 0.00 3.71
801 853 4.778213 TCTGGATTGGAGTATTTGGAGG 57.222 45.455 0.00 0.00 0.00 4.30
802 854 5.749462 AGTTCTGGATTGGAGTATTTGGAG 58.251 41.667 0.00 0.00 0.00 3.86
803 855 5.626809 CGAGTTCTGGATTGGAGTATTTGGA 60.627 44.000 0.00 0.00 0.00 3.53
804 856 4.572389 CGAGTTCTGGATTGGAGTATTTGG 59.428 45.833 0.00 0.00 0.00 3.28
805 857 4.034510 GCGAGTTCTGGATTGGAGTATTTG 59.965 45.833 0.00 0.00 0.00 2.32
806 858 4.080863 AGCGAGTTCTGGATTGGAGTATTT 60.081 41.667 0.00 0.00 0.00 1.40
807 859 3.452627 AGCGAGTTCTGGATTGGAGTATT 59.547 43.478 0.00 0.00 0.00 1.89
808 860 3.034635 AGCGAGTTCTGGATTGGAGTAT 58.965 45.455 0.00 0.00 0.00 2.12
809 861 2.457598 AGCGAGTTCTGGATTGGAGTA 58.542 47.619 0.00 0.00 0.00 2.59
810 862 1.270907 AGCGAGTTCTGGATTGGAGT 58.729 50.000 0.00 0.00 0.00 3.85
811 863 3.526931 TTAGCGAGTTCTGGATTGGAG 57.473 47.619 0.00 0.00 0.00 3.86
812 864 3.369471 CCTTTAGCGAGTTCTGGATTGGA 60.369 47.826 0.00 0.00 0.00 3.53
813 865 2.939103 CCTTTAGCGAGTTCTGGATTGG 59.061 50.000 0.00 0.00 0.00 3.16
814 866 3.861840 TCCTTTAGCGAGTTCTGGATTG 58.138 45.455 0.00 0.00 0.00 2.67
815 867 3.769844 TCTCCTTTAGCGAGTTCTGGATT 59.230 43.478 0.00 0.00 0.00 3.01
816 868 3.366396 TCTCCTTTAGCGAGTTCTGGAT 58.634 45.455 0.00 0.00 0.00 3.41
817 869 2.755655 CTCTCCTTTAGCGAGTTCTGGA 59.244 50.000 0.00 0.00 0.00 3.86
818 870 2.159170 CCTCTCCTTTAGCGAGTTCTGG 60.159 54.545 0.00 0.00 0.00 3.86
819 871 2.755655 TCCTCTCCTTTAGCGAGTTCTG 59.244 50.000 0.00 0.00 0.00 3.02
820 872 3.020984 CTCCTCTCCTTTAGCGAGTTCT 58.979 50.000 0.00 0.00 0.00 3.01
821 873 2.756207 ACTCCTCTCCTTTAGCGAGTTC 59.244 50.000 0.00 0.00 33.27 3.01
822 874 2.810164 ACTCCTCTCCTTTAGCGAGTT 58.190 47.619 0.00 0.00 33.27 3.01
823 875 2.517998 ACTCCTCTCCTTTAGCGAGT 57.482 50.000 0.00 0.00 32.63 4.18
824 876 4.985538 TTAACTCCTCTCCTTTAGCGAG 57.014 45.455 0.00 0.00 0.00 5.03
825 877 5.421056 TCATTTAACTCCTCTCCTTTAGCGA 59.579 40.000 0.00 0.00 0.00 4.93
826 878 5.661458 TCATTTAACTCCTCTCCTTTAGCG 58.339 41.667 0.00 0.00 0.00 4.26
827 879 6.052360 CCTCATTTAACTCCTCTCCTTTAGC 58.948 44.000 0.00 0.00 0.00 3.09
828 880 7.343316 TCTCCTCATTTAACTCCTCTCCTTTAG 59.657 40.741 0.00 0.00 0.00 1.85
829 881 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
830 882 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
831 883 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
832 884 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
833 885 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
834 886 5.301805 CCTCTCTCCTCATTTAACTCCTCTC 59.698 48.000 0.00 0.00 0.00 3.20
835 887 5.043732 TCCTCTCTCCTCATTTAACTCCTCT 60.044 44.000 0.00 0.00 0.00 3.69
836 888 5.068591 GTCCTCTCTCCTCATTTAACTCCTC 59.931 48.000 0.00 0.00 0.00 3.71
837 889 4.959839 GTCCTCTCTCCTCATTTAACTCCT 59.040 45.833 0.00 0.00 0.00 3.69
838 890 4.959839 AGTCCTCTCTCCTCATTTAACTCC 59.040 45.833 0.00 0.00 0.00 3.85
839 891 7.648039 TTAGTCCTCTCTCCTCATTTAACTC 57.352 40.000 0.00 0.00 0.00 3.01
840 892 7.289084 GGATTAGTCCTCTCTCCTCATTTAACT 59.711 40.741 0.00 0.00 41.60 2.24
841 893 7.070074 TGGATTAGTCCTCTCTCCTCATTTAAC 59.930 40.741 5.79 0.00 45.32 2.01
842 894 7.132805 TGGATTAGTCCTCTCTCCTCATTTAA 58.867 38.462 5.79 0.00 45.32 1.52
843 895 6.683537 TGGATTAGTCCTCTCTCCTCATTTA 58.316 40.000 5.79 0.00 45.32 1.40
844 896 5.533112 TGGATTAGTCCTCTCTCCTCATTT 58.467 41.667 5.79 0.00 45.32 2.32
845 897 5.149584 TGGATTAGTCCTCTCTCCTCATT 57.850 43.478 5.79 0.00 45.32 2.57
846 898 4.823364 TGGATTAGTCCTCTCTCCTCAT 57.177 45.455 5.79 0.00 45.32 2.90
847 899 4.823364 ATGGATTAGTCCTCTCTCCTCA 57.177 45.455 5.79 0.00 45.32 3.86
848 900 7.790782 AAATATGGATTAGTCCTCTCTCCTC 57.209 40.000 5.79 0.00 45.32 3.71
849 901 9.320295 CTAAAATATGGATTAGTCCTCTCTCCT 57.680 37.037 5.79 0.00 45.32 3.69
850 902 9.095700 ACTAAAATATGGATTAGTCCTCTCTCC 57.904 37.037 5.79 0.00 45.32 3.71
854 906 9.327731 CCCTACTAAAATATGGATTAGTCCTCT 57.672 37.037 5.79 0.00 45.32 3.69
855 907 8.541234 CCCCTACTAAAATATGGATTAGTCCTC 58.459 40.741 5.79 0.00 45.32 3.71
856 908 8.023271 ACCCCTACTAAAATATGGATTAGTCCT 58.977 37.037 5.79 0.00 45.32 3.85
857 909 8.215954 ACCCCTACTAAAATATGGATTAGTCC 57.784 38.462 10.46 0.00 40.53 3.85
859 911 9.109246 GGTACCCCTACTAAAATATGGATTAGT 57.891 37.037 0.00 11.41 43.05 2.24
912 964 6.681729 TTCAAACATCCCTGACTAACTAGT 57.318 37.500 0.00 0.00 39.71 2.57
913 965 7.661847 AGTTTTCAAACATCCCTGACTAACTAG 59.338 37.037 5.26 0.00 41.30 2.57
914 966 7.514721 AGTTTTCAAACATCCCTGACTAACTA 58.485 34.615 5.26 0.00 41.30 2.24
915 967 6.365520 AGTTTTCAAACATCCCTGACTAACT 58.634 36.000 5.26 0.00 41.30 2.24
916 968 6.635030 AGTTTTCAAACATCCCTGACTAAC 57.365 37.500 5.26 0.00 41.30 2.34
917 969 7.654022 AAAGTTTTCAAACATCCCTGACTAA 57.346 32.000 5.26 0.00 41.30 2.24
918 970 8.626526 GTTAAAGTTTTCAAACATCCCTGACTA 58.373 33.333 5.26 0.00 41.30 2.59
919 971 7.417456 GGTTAAAGTTTTCAAACATCCCTGACT 60.417 37.037 5.26 0.00 41.30 3.41
920 972 6.700081 GGTTAAAGTTTTCAAACATCCCTGAC 59.300 38.462 5.26 0.00 41.30 3.51
921 973 6.609616 AGGTTAAAGTTTTCAAACATCCCTGA 59.390 34.615 5.26 0.00 41.30 3.86
922 974 6.816136 AGGTTAAAGTTTTCAAACATCCCTG 58.184 36.000 5.26 0.00 41.30 4.45
923 975 7.432148 AAGGTTAAAGTTTTCAAACATCCCT 57.568 32.000 5.26 0.67 41.30 4.20
924 976 8.500753 AAAAGGTTAAAGTTTTCAAACATCCC 57.499 30.769 5.26 0.00 41.30 3.85
980 1032 0.329596 GGTGCTTGGATCAAGGGACT 59.670 55.000 3.86 0.00 41.31 3.85
981 1033 0.681243 GGGTGCTTGGATCAAGGGAC 60.681 60.000 9.34 0.00 41.31 4.46
982 1034 0.846427 AGGGTGCTTGGATCAAGGGA 60.846 55.000 9.34 0.00 41.31 4.20
983 1035 0.394899 GAGGGTGCTTGGATCAAGGG 60.395 60.000 9.34 0.00 41.31 3.95
984 1036 0.622665 AGAGGGTGCTTGGATCAAGG 59.377 55.000 9.34 0.00 41.31 3.61
985 1037 2.503895 AAGAGGGTGCTTGGATCAAG 57.496 50.000 3.50 3.50 43.57 3.02
986 1038 2.026262 GGTAAGAGGGTGCTTGGATCAA 60.026 50.000 0.00 0.00 0.00 2.57
987 1039 1.559682 GGTAAGAGGGTGCTTGGATCA 59.440 52.381 0.00 0.00 0.00 2.92
988 1040 1.134068 GGGTAAGAGGGTGCTTGGATC 60.134 57.143 0.00 0.00 0.00 3.36
989 1041 0.919710 GGGTAAGAGGGTGCTTGGAT 59.080 55.000 0.00 0.00 0.00 3.41
990 1042 0.178873 AGGGTAAGAGGGTGCTTGGA 60.179 55.000 0.00 0.00 0.00 3.53
991 1043 0.253327 GAGGGTAAGAGGGTGCTTGG 59.747 60.000 0.00 0.00 0.00 3.61
992 1044 1.280457 AGAGGGTAAGAGGGTGCTTG 58.720 55.000 0.00 0.00 0.00 4.01
993 1045 2.046280 AAGAGGGTAAGAGGGTGCTT 57.954 50.000 0.00 0.00 0.00 3.91
994 1046 2.044630 ACTAAGAGGGTAAGAGGGTGCT 59.955 50.000 0.00 0.00 0.00 4.40
995 1047 2.468915 ACTAAGAGGGTAAGAGGGTGC 58.531 52.381 0.00 0.00 0.00 5.01
996 1048 5.500546 AAAACTAAGAGGGTAAGAGGGTG 57.499 43.478 0.00 0.00 0.00 4.61
997 1049 5.013913 GGAAAAACTAAGAGGGTAAGAGGGT 59.986 44.000 0.00 0.00 0.00 4.34
998 1050 5.498393 GGAAAAACTAAGAGGGTAAGAGGG 58.502 45.833 0.00 0.00 0.00 4.30
999 1051 5.176592 CGGAAAAACTAAGAGGGTAAGAGG 58.823 45.833 0.00 0.00 0.00 3.69
1000 1052 5.791666 ACGGAAAAACTAAGAGGGTAAGAG 58.208 41.667 0.00 0.00 0.00 2.85
1001 1053 5.813513 ACGGAAAAACTAAGAGGGTAAGA 57.186 39.130 0.00 0.00 0.00 2.10
1002 1054 8.473219 AGTATACGGAAAAACTAAGAGGGTAAG 58.527 37.037 0.00 0.00 0.00 2.34
1003 1055 8.366359 AGTATACGGAAAAACTAAGAGGGTAA 57.634 34.615 0.00 0.00 0.00 2.85
1004 1056 7.961326 AGTATACGGAAAAACTAAGAGGGTA 57.039 36.000 0.00 0.00 0.00 3.69
1005 1057 6.864151 AGTATACGGAAAAACTAAGAGGGT 57.136 37.500 0.00 0.00 0.00 4.34
1006 1058 8.448615 CAAAAGTATACGGAAAAACTAAGAGGG 58.551 37.037 0.00 0.00 0.00 4.30
1007 1059 8.996271 ACAAAAGTATACGGAAAAACTAAGAGG 58.004 33.333 0.00 0.00 0.00 3.69
1008 1060 9.807386 CACAAAAGTATACGGAAAAACTAAGAG 57.193 33.333 0.00 0.00 0.00 2.85
1009 1061 8.776470 CCACAAAAGTATACGGAAAAACTAAGA 58.224 33.333 0.00 0.00 0.00 2.10
1010 1062 8.776470 TCCACAAAAGTATACGGAAAAACTAAG 58.224 33.333 0.00 0.00 0.00 2.18
1011 1063 8.674263 TCCACAAAAGTATACGGAAAAACTAA 57.326 30.769 0.00 0.00 0.00 2.24
1012 1064 8.149647 TCTCCACAAAAGTATACGGAAAAACTA 58.850 33.333 0.00 0.00 0.00 2.24
1013 1065 6.993902 TCTCCACAAAAGTATACGGAAAAACT 59.006 34.615 0.00 0.00 0.00 2.66
1014 1066 7.073883 GTCTCCACAAAAGTATACGGAAAAAC 58.926 38.462 0.00 0.00 0.00 2.43
1015 1067 6.073657 CGTCTCCACAAAAGTATACGGAAAAA 60.074 38.462 0.00 0.00 0.00 1.94
1016 1068 5.406175 CGTCTCCACAAAAGTATACGGAAAA 59.594 40.000 0.00 0.00 0.00 2.29
1017 1069 4.925054 CGTCTCCACAAAAGTATACGGAAA 59.075 41.667 0.00 0.00 0.00 3.13
1018 1070 4.487948 CGTCTCCACAAAAGTATACGGAA 58.512 43.478 0.00 0.00 0.00 4.30
1019 1071 4.100707 CGTCTCCACAAAAGTATACGGA 57.899 45.455 0.00 0.00 0.00 4.69
1020 1072 3.184541 CCGTCTCCACAAAAGTATACGG 58.815 50.000 0.00 0.00 42.12 4.02
1021 1073 4.100707 TCCGTCTCCACAAAAGTATACG 57.899 45.455 0.00 0.00 0.00 3.06
1022 1074 4.628766 GGTTCCGTCTCCACAAAAGTATAC 59.371 45.833 0.00 0.00 0.00 1.47
1074 1126 3.849951 ATTCACGCCGCCCGATCT 61.850 61.111 0.65 0.00 41.02 2.75
1081 1133 1.062525 GGATTCACATTCACGCCGC 59.937 57.895 0.00 0.00 0.00 6.53
1168 1224 1.921049 TCTCTTCTCGGACCCCTTCTA 59.079 52.381 0.00 0.00 0.00 2.10
1573 1643 0.702902 TAGACCGGAACAGACCCTCT 59.297 55.000 9.46 0.00 0.00 3.69
1645 1715 3.118408 TCCCAAGATAACAAGATCCGGTG 60.118 47.826 0.00 0.00 0.00 4.94
1702 1795 6.548622 AGATGAACAATGGAAATCTATGTGGG 59.451 38.462 0.00 0.00 0.00 4.61
1708 1801 8.737168 ATTTCGAGATGAACAATGGAAATCTA 57.263 30.769 0.00 0.00 35.97 1.98
1889 2208 3.437741 TCATCTTAATGTGCTGCAGTGTG 59.562 43.478 16.64 0.00 34.32 3.82
1969 2288 6.894682 TGCTTTGTATGTAGTCCATATTGGA 58.105 36.000 0.00 0.00 45.98 3.53
1970 2289 7.566760 TTGCTTTGTATGTAGTCCATATTGG 57.433 36.000 0.00 0.00 38.29 3.16
1973 2292 9.407380 TCATTTTGCTTTGTATGTAGTCCATAT 57.593 29.630 0.00 0.00 38.29 1.78
1974 2293 8.800370 TCATTTTGCTTTGTATGTAGTCCATA 57.200 30.769 0.00 0.00 34.86 2.74
1975 2294 7.394359 ACTCATTTTGCTTTGTATGTAGTCCAT 59.606 33.333 0.00 0.00 37.58 3.41
1976 2295 6.714810 ACTCATTTTGCTTTGTATGTAGTCCA 59.285 34.615 0.00 0.00 0.00 4.02
1977 2296 7.023575 CACTCATTTTGCTTTGTATGTAGTCC 58.976 38.462 0.00 0.00 0.00 3.85
1978 2297 7.806690 TCACTCATTTTGCTTTGTATGTAGTC 58.193 34.615 0.00 0.00 0.00 2.59
1979 2298 7.744087 TCACTCATTTTGCTTTGTATGTAGT 57.256 32.000 0.00 0.00 0.00 2.73
1980 2299 9.282247 GATTCACTCATTTTGCTTTGTATGTAG 57.718 33.333 0.00 0.00 0.00 2.74
1981 2300 9.013229 AGATTCACTCATTTTGCTTTGTATGTA 57.987 29.630 0.00 0.00 0.00 2.29
1982 2301 7.889469 AGATTCACTCATTTTGCTTTGTATGT 58.111 30.769 0.00 0.00 0.00 2.29
1983 2302 9.282247 GTAGATTCACTCATTTTGCTTTGTATG 57.718 33.333 0.00 0.00 0.00 2.39
1984 2303 9.013229 TGTAGATTCACTCATTTTGCTTTGTAT 57.987 29.630 0.00 0.00 0.00 2.29
1985 2304 8.289618 GTGTAGATTCACTCATTTTGCTTTGTA 58.710 33.333 0.00 0.00 35.68 2.41
1986 2305 7.013655 AGTGTAGATTCACTCATTTTGCTTTGT 59.986 33.333 0.00 0.00 44.07 2.83
1987 2306 7.365741 AGTGTAGATTCACTCATTTTGCTTTG 58.634 34.615 0.00 0.00 44.07 2.77
1988 2307 7.516198 AGTGTAGATTCACTCATTTTGCTTT 57.484 32.000 0.00 0.00 44.07 3.51
2019 2338 9.875691 AACTACATACGGATGTATATAGACGTA 57.124 33.333 20.64 9.65 45.42 3.57
2020 2339 8.783833 AACTACATACGGATGTATATAGACGT 57.216 34.615 20.64 10.41 45.42 4.34
2021 2340 9.486857 CAAACTACATACGGATGTATATAGACG 57.513 37.037 20.64 9.79 45.42 4.18
2029 2348 9.872721 TTTCAATACAAACTACATACGGATGTA 57.127 29.630 19.32 19.32 44.77 2.29
2031 2350 9.864034 GATTTCAATACAAACTACATACGGATG 57.136 33.333 5.94 5.94 39.16 3.51
2032 2351 9.832445 AGATTTCAATACAAACTACATACGGAT 57.168 29.630 0.00 0.00 0.00 4.18
2033 2352 9.309516 GAGATTTCAATACAAACTACATACGGA 57.690 33.333 0.00 0.00 0.00 4.69
2034 2353 9.314321 AGAGATTTCAATACAAACTACATACGG 57.686 33.333 0.00 0.00 0.00 4.02
2064 2383 9.819267 CTCCCTTCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
2065 2384 8.979534 ACTCCCTTCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
2071 2390 9.901172 AATTGTACTCCCTTCGTTTCTAAATAT 57.099 29.630 0.00 0.00 0.00 1.28
2072 2391 9.158233 CAATTGTACTCCCTTCGTTTCTAAATA 57.842 33.333 0.00 0.00 0.00 1.40
2073 2392 7.881232 TCAATTGTACTCCCTTCGTTTCTAAAT 59.119 33.333 5.13 0.00 0.00 1.40
2074 2393 7.218614 TCAATTGTACTCCCTTCGTTTCTAAA 58.781 34.615 5.13 0.00 0.00 1.85
2075 2394 6.761312 TCAATTGTACTCCCTTCGTTTCTAA 58.239 36.000 5.13 0.00 0.00 2.10
2076 2395 6.349243 TCAATTGTACTCCCTTCGTTTCTA 57.651 37.500 5.13 0.00 0.00 2.10
2077 2396 5.223449 TCAATTGTACTCCCTTCGTTTCT 57.777 39.130 5.13 0.00 0.00 2.52
2078 2397 5.617087 GCTTCAATTGTACTCCCTTCGTTTC 60.617 44.000 5.13 0.00 0.00 2.78
2079 2398 4.215613 GCTTCAATTGTACTCCCTTCGTTT 59.784 41.667 5.13 0.00 0.00 3.60
2080 2399 3.751698 GCTTCAATTGTACTCCCTTCGTT 59.248 43.478 5.13 0.00 0.00 3.85
2081 2400 3.244422 TGCTTCAATTGTACTCCCTTCGT 60.244 43.478 5.13 0.00 0.00 3.85
2082 2401 3.334691 TGCTTCAATTGTACTCCCTTCG 58.665 45.455 5.13 0.00 0.00 3.79
2083 2402 4.327680 ACTGCTTCAATTGTACTCCCTTC 58.672 43.478 5.13 0.00 0.00 3.46
2084 2403 4.373156 ACTGCTTCAATTGTACTCCCTT 57.627 40.909 5.13 0.00 0.00 3.95
2085 2404 4.074970 CAACTGCTTCAATTGTACTCCCT 58.925 43.478 5.13 0.00 0.00 4.20
2086 2405 3.366374 GCAACTGCTTCAATTGTACTCCC 60.366 47.826 5.13 0.00 38.21 4.30
2087 2406 3.253188 TGCAACTGCTTCAATTGTACTCC 59.747 43.478 5.13 0.00 42.66 3.85
2088 2407 4.488126 TGCAACTGCTTCAATTGTACTC 57.512 40.909 5.13 0.00 42.66 2.59
2089 2408 5.390885 CGTATGCAACTGCTTCAATTGTACT 60.391 40.000 5.13 0.00 42.66 2.73
2090 2409 4.788100 CGTATGCAACTGCTTCAATTGTAC 59.212 41.667 5.13 0.00 42.66 2.90
2091 2410 4.454161 ACGTATGCAACTGCTTCAATTGTA 59.546 37.500 5.13 0.00 42.66 2.41
2107 2426 7.745022 TGTATTAACTTCACTGTACGTATGC 57.255 36.000 0.00 0.00 0.00 3.14
2112 2431 7.730067 TTCGATGTATTAACTTCACTGTACG 57.270 36.000 0.00 0.00 31.67 3.67
2175 2494 5.280164 GCAATCGTAGACTAACCTAACCTC 58.720 45.833 0.00 0.00 42.51 3.85
2176 2495 4.099113 GGCAATCGTAGACTAACCTAACCT 59.901 45.833 0.00 0.00 42.51 3.50
2177 2496 4.142093 TGGCAATCGTAGACTAACCTAACC 60.142 45.833 0.00 0.00 42.51 2.85
2178 2497 5.002464 TGGCAATCGTAGACTAACCTAAC 57.998 43.478 0.00 0.00 42.51 2.34
2179 2498 5.664294 TTGGCAATCGTAGACTAACCTAA 57.336 39.130 0.00 0.00 42.51 2.69
2180 2499 5.664294 TTTGGCAATCGTAGACTAACCTA 57.336 39.130 0.00 0.00 42.51 3.08
2185 2504 5.584649 CCAGATTTTTGGCAATCGTAGACTA 59.415 40.000 0.00 0.00 42.51 2.59
2192 2511 3.307782 GCATTCCAGATTTTTGGCAATCG 59.692 43.478 0.00 0.00 38.10 3.34
2343 2668 1.243902 TGGGAACGCCATGTCTTTTC 58.756 50.000 0.00 0.00 35.15 2.29
2364 2689 1.005340 GCAGATGAAGGTTGAGCGAG 58.995 55.000 0.00 0.00 0.00 5.03
2453 2962 2.831526 GAGGGAATAGAGAGGAGGATGC 59.168 54.545 0.00 0.00 0.00 3.91
2526 3035 0.615850 CCACCAACCCCTCTCTCTTC 59.384 60.000 0.00 0.00 0.00 2.87
2571 3080 8.317891 ACATTATGCGGTATTATTCATTCGAA 57.682 30.769 0.00 0.00 35.05 3.71
3075 3587 2.542595 CGAGTATATGTTTTGCGGGTCC 59.457 50.000 0.00 0.00 0.00 4.46
3096 3608 9.674824 CAAGACTTCATTGGCATAGATTTATTC 57.325 33.333 0.00 0.00 0.00 1.75
3132 3644 7.306983 CCAAAATGAATCTGTTTTCTTCACAGC 60.307 37.037 0.00 0.00 41.37 4.40
3227 3740 2.069465 AATGAAAGCACACGCGGCAA 62.069 50.000 12.47 0.00 45.49 4.52
3476 3989 5.470098 ACATTCCAGACACACTTGTAACATC 59.530 40.000 0.00 0.00 35.47 3.06
3713 4227 4.621769 AGTAACTTAGTATGGGCAGTCCT 58.378 43.478 0.00 0.00 36.20 3.85
3719 4233 7.344095 TCTCAGTTAGTAACTTAGTATGGGC 57.656 40.000 19.12 0.00 40.46 5.36
3769 4285 0.035056 ACATGCCTAGCCCTGTGTTC 60.035 55.000 0.00 0.00 0.00 3.18
4125 4641 7.096477 GCAATCAGTTGTACAAATTCAACACTC 60.096 37.037 10.51 0.00 44.08 3.51
4158 4674 9.079833 TGAAGAACGATAGGAAAAATAGTTACG 57.920 33.333 0.00 0.00 43.77 3.18
4254 4855 1.879380 CATCGAGAGCAAACCAAACCA 59.121 47.619 0.00 0.00 0.00 3.67
4266 4867 4.083110 ACAGCATTCAAAAACCATCGAGAG 60.083 41.667 0.00 0.00 0.00 3.20
4282 4883 5.483685 TTGAACTACAGGTCTACAGCATT 57.516 39.130 0.00 0.00 0.00 3.56
4286 4887 5.844004 ACAGTTTGAACTACAGGTCTACAG 58.156 41.667 0.00 0.00 37.08 2.74
4287 4888 5.864418 ACAGTTTGAACTACAGGTCTACA 57.136 39.130 0.00 0.00 37.08 2.74
4288 4889 7.407337 CAAAACAGTTTGAACTACAGGTCTAC 58.593 38.462 0.00 0.00 45.99 2.59
4289 4890 6.540914 CCAAAACAGTTTGAACTACAGGTCTA 59.459 38.462 0.00 0.00 45.99 2.59
4290 4891 5.357032 CCAAAACAGTTTGAACTACAGGTCT 59.643 40.000 0.00 0.00 45.99 3.85
4291 4892 5.355910 TCCAAAACAGTTTGAACTACAGGTC 59.644 40.000 0.00 0.00 45.99 3.85
4316 4929 7.601856 TCACATGTGAAAGTTTTCAGAAAAGT 58.398 30.769 26.02 9.29 46.80 2.66
4336 4949 8.842358 AGAAGCAAATTTCATGAAAATCACAT 57.158 26.923 23.91 10.16 36.54 3.21
4389 5002 7.435488 GCTTCGTATATAGGGCACAACTATATG 59.565 40.741 12.74 7.23 41.67 1.78
4444 5057 1.824230 ACATGCAAACATACGGCCAAT 59.176 42.857 2.24 0.00 33.67 3.16
4448 5061 4.204168 CGATTTTACATGCAAACATACGGC 59.796 41.667 0.00 0.00 33.67 5.68
4514 5127 2.288666 GCGATGAATTTAGGCAGGACA 58.711 47.619 0.00 0.00 0.00 4.02
4570 5183 3.211045 CAAACTTTTTCAGACGGAGGGA 58.789 45.455 0.00 0.00 0.00 4.20
4601 5214 9.542462 GCACTAATTTGGTACTAGATACATTCA 57.458 33.333 0.00 0.00 35.23 2.57
4610 5223 9.900710 CTGTATCTAGCACTAATTTGGTACTAG 57.099 37.037 11.90 11.90 33.99 2.57
4612 5225 8.307582 ACTGTATCTAGCACTAATTTGGTACT 57.692 34.615 0.00 0.00 0.00 2.73
4613 5226 8.195436 TGACTGTATCTAGCACTAATTTGGTAC 58.805 37.037 0.00 0.00 0.00 3.34
4615 5228 7.182817 TGACTGTATCTAGCACTAATTTGGT 57.817 36.000 0.00 0.00 0.00 3.67
4616 5229 8.668510 AATGACTGTATCTAGCACTAATTTGG 57.331 34.615 0.00 0.00 0.00 3.28
4620 5233 8.918116 TCTCAAATGACTGTATCTAGCACTAAT 58.082 33.333 0.00 0.00 0.00 1.73
4630 5243 7.138692 AGCTTGTTTCTCAAATGACTGTATC 57.861 36.000 0.00 0.00 35.48 2.24
4631 5244 7.365741 CAAGCTTGTTTCTCAAATGACTGTAT 58.634 34.615 18.65 0.00 35.48 2.29
4634 5247 4.980434 CCAAGCTTGTTTCTCAAATGACTG 59.020 41.667 24.35 0.00 35.48 3.51
4635 5248 4.889409 TCCAAGCTTGTTTCTCAAATGACT 59.111 37.500 24.35 0.00 35.48 3.41
4637 5250 4.644234 TGTCCAAGCTTGTTTCTCAAATGA 59.356 37.500 24.35 8.03 35.48 2.57
4638 5251 4.741676 GTGTCCAAGCTTGTTTCTCAAATG 59.258 41.667 24.35 5.76 35.48 2.32
4639 5252 4.498009 CGTGTCCAAGCTTGTTTCTCAAAT 60.498 41.667 24.35 0.00 35.48 2.32
4641 5254 2.354510 CGTGTCCAAGCTTGTTTCTCAA 59.645 45.455 24.35 0.88 34.61 3.02
4643 5256 1.334149 GCGTGTCCAAGCTTGTTTCTC 60.334 52.381 24.35 13.20 33.03 2.87
4645 5258 0.663153 AGCGTGTCCAAGCTTGTTTC 59.337 50.000 24.35 14.17 43.39 2.78
4647 5260 4.559502 AGCGTGTCCAAGCTTGTT 57.440 50.000 24.35 0.00 43.39 2.83
4652 5265 2.289547 TGACTAAAAAGCGTGTCCAAGC 59.710 45.455 0.00 0.00 36.04 4.01
4653 5266 4.749245 ATGACTAAAAAGCGTGTCCAAG 57.251 40.909 0.00 0.00 0.00 3.61
4654 5267 5.066634 TCAAATGACTAAAAAGCGTGTCCAA 59.933 36.000 0.00 0.00 0.00 3.53
4655 5268 4.576873 TCAAATGACTAAAAAGCGTGTCCA 59.423 37.500 0.00 0.00 0.00 4.02
4656 5269 5.049680 TCTCAAATGACTAAAAAGCGTGTCC 60.050 40.000 0.00 0.00 0.00 4.02
4657 5270 5.985781 TCTCAAATGACTAAAAAGCGTGTC 58.014 37.500 0.00 0.00 0.00 3.67
4659 5272 7.858052 ATTTCTCAAATGACTAAAAAGCGTG 57.142 32.000 0.00 0.00 0.00 5.34
4661 5274 8.578769 GCTTATTTCTCAAATGACTAAAAAGCG 58.421 33.333 0.00 0.00 32.38 4.68
4662 5275 9.631452 AGCTTATTTCTCAAATGACTAAAAAGC 57.369 29.630 15.06 15.06 32.38 3.51
4671 5284 6.348458 CGTGTCCAAGCTTATTTCTCAAATGA 60.348 38.462 0.00 0.00 32.38 2.57
4672 5285 5.796935 CGTGTCCAAGCTTATTTCTCAAATG 59.203 40.000 0.00 0.00 32.38 2.32
4673 5286 5.619981 GCGTGTCCAAGCTTATTTCTCAAAT 60.620 40.000 0.00 0.00 33.03 2.32
4674 5287 4.320202 GCGTGTCCAAGCTTATTTCTCAAA 60.320 41.667 0.00 0.00 33.03 2.69
4676 5289 2.742053 GCGTGTCCAAGCTTATTTCTCA 59.258 45.455 0.00 0.00 33.03 3.27
4678 5291 3.059352 AGCGTGTCCAAGCTTATTTCT 57.941 42.857 0.00 0.00 43.39 2.52
4686 5299 0.660300 CCGAAAAAGCGTGTCCAAGC 60.660 55.000 0.00 0.00 36.04 4.01
4687 5300 0.660300 GCCGAAAAAGCGTGTCCAAG 60.660 55.000 0.00 0.00 0.00 3.61
4690 5303 0.030235 AAAGCCGAAAAAGCGTGTCC 59.970 50.000 0.00 0.00 34.64 4.02
4692 5305 2.190161 GAAAAAGCCGAAAAAGCGTGT 58.810 42.857 0.00 0.00 34.64 4.49
4693 5306 1.187055 CGAAAAAGCCGAAAAAGCGTG 59.813 47.619 0.00 0.00 34.64 5.34
4694 5307 1.472990 CGAAAAAGCCGAAAAAGCGT 58.527 45.000 0.00 0.00 34.64 5.07
4697 5310 2.041244 CGTCCGAAAAAGCCGAAAAAG 58.959 47.619 0.00 0.00 0.00 2.27
4698 5311 1.268640 CCGTCCGAAAAAGCCGAAAAA 60.269 47.619 0.00 0.00 0.00 1.94
4700 5313 0.532417 TCCGTCCGAAAAAGCCGAAA 60.532 50.000 0.00 0.00 0.00 3.46
4702 5315 1.373748 CTCCGTCCGAAAAAGCCGA 60.374 57.895 0.00 0.00 0.00 5.54
4703 5316 2.388232 CCTCCGTCCGAAAAAGCCG 61.388 63.158 0.00 0.00 0.00 5.52
4704 5317 0.037046 TACCTCCGTCCGAAAAAGCC 60.037 55.000 0.00 0.00 0.00 4.35
4705 5318 1.337541 ACTACCTCCGTCCGAAAAAGC 60.338 52.381 0.00 0.00 0.00 3.51
4706 5319 2.738013 ACTACCTCCGTCCGAAAAAG 57.262 50.000 0.00 0.00 0.00 2.27
4707 5320 2.231235 GGTACTACCTCCGTCCGAAAAA 59.769 50.000 0.00 0.00 34.73 1.94
4710 5323 3.175133 GGTACTACCTCCGTCCGAA 57.825 57.895 0.00 0.00 34.73 4.30
4722 5362 5.337009 GGCACAAGCAACTTACTAGGTACTA 60.337 44.000 0.00 0.00 44.61 1.82
4728 5368 4.515191 TGAAAGGCACAAGCAACTTACTAG 59.485 41.667 0.00 0.00 44.61 2.57
4768 5408 9.434420 CAAGACAAGAATTTTGATAGAGAGAGT 57.566 33.333 7.18 0.00 0.00 3.24
4769 5409 8.881743 CCAAGACAAGAATTTTGATAGAGAGAG 58.118 37.037 7.18 0.00 0.00 3.20
4772 5412 9.745018 AATCCAAGACAAGAATTTTGATAGAGA 57.255 29.630 7.18 0.00 0.00 3.10
4776 5416 9.912634 GACAAATCCAAGACAAGAATTTTGATA 57.087 29.630 0.00 0.00 0.00 2.15
4777 5417 8.645110 AGACAAATCCAAGACAAGAATTTTGAT 58.355 29.630 0.00 0.00 0.00 2.57
4778 5418 8.010733 AGACAAATCCAAGACAAGAATTTTGA 57.989 30.769 0.00 0.00 0.00 2.69
4779 5419 9.403110 CTAGACAAATCCAAGACAAGAATTTTG 57.597 33.333 0.00 0.00 0.00 2.44
4785 5425 8.206867 CCATATCTAGACAAATCCAAGACAAGA 58.793 37.037 0.00 0.00 0.00 3.02
4786 5426 8.206867 TCCATATCTAGACAAATCCAAGACAAG 58.793 37.037 0.00 0.00 0.00 3.16
4787 5427 8.089625 TCCATATCTAGACAAATCCAAGACAA 57.910 34.615 0.00 0.00 0.00 3.18
4788 5428 7.675161 TCCATATCTAGACAAATCCAAGACA 57.325 36.000 0.00 0.00 0.00 3.41
4789 5429 8.153550 ACATCCATATCTAGACAAATCCAAGAC 58.846 37.037 0.00 0.00 0.00 3.01
4790 5430 8.267620 ACATCCATATCTAGACAAATCCAAGA 57.732 34.615 0.00 0.00 0.00 3.02
4863 5503 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4864 5504 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4865 5505 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
4866 5506 9.762933 TTTCCCAAAATTCTTGTCTTAGATTTG 57.237 29.630 0.00 0.00 29.84 2.32
4867 5507 9.987272 CTTTCCCAAAATTCTTGTCTTAGATTT 57.013 29.630 0.00 0.00 0.00 2.17
4868 5508 9.367160 TCTTTCCCAAAATTCTTGTCTTAGATT 57.633 29.630 0.00 0.00 0.00 2.40
4869 5509 8.940397 TCTTTCCCAAAATTCTTGTCTTAGAT 57.060 30.769 0.00 0.00 0.00 1.98
4870 5510 7.448469 CCTCTTTCCCAAAATTCTTGTCTTAGA 59.552 37.037 0.00 0.00 0.00 2.10
4871 5511 7.309438 CCCTCTTTCCCAAAATTCTTGTCTTAG 60.309 40.741 0.00 0.00 0.00 2.18
4872 5512 6.493458 CCCTCTTTCCCAAAATTCTTGTCTTA 59.507 38.462 0.00 0.00 0.00 2.10
4873 5513 5.305386 CCCTCTTTCCCAAAATTCTTGTCTT 59.695 40.000 0.00 0.00 0.00 3.01
4874 5514 4.835056 CCCTCTTTCCCAAAATTCTTGTCT 59.165 41.667 0.00 0.00 0.00 3.41
4875 5515 4.832823 TCCCTCTTTCCCAAAATTCTTGTC 59.167 41.667 0.00 0.00 0.00 3.18
4876 5516 4.814967 TCCCTCTTTCCCAAAATTCTTGT 58.185 39.130 0.00 0.00 0.00 3.16
4877 5517 4.835056 ACTCCCTCTTTCCCAAAATTCTTG 59.165 41.667 0.00 0.00 0.00 3.02
4878 5518 5.079998 ACTCCCTCTTTCCCAAAATTCTT 57.920 39.130 0.00 0.00 0.00 2.52
4879 5519 4.749048 ACTCCCTCTTTCCCAAAATTCT 57.251 40.909 0.00 0.00 0.00 2.40
4880 5520 7.998964 TGATATACTCCCTCTTTCCCAAAATTC 59.001 37.037 0.00 0.00 0.00 2.17
4881 5521 7.882755 TGATATACTCCCTCTTTCCCAAAATT 58.117 34.615 0.00 0.00 0.00 1.82
4882 5522 7.465900 TGATATACTCCCTCTTTCCCAAAAT 57.534 36.000 0.00 0.00 0.00 1.82
4883 5523 6.901615 TGATATACTCCCTCTTTCCCAAAA 57.098 37.500 0.00 0.00 0.00 2.44
4884 5524 7.794683 ACTATGATATACTCCCTCTTTCCCAAA 59.205 37.037 0.00 0.00 0.00 3.28
4885 5525 7.235606 CACTATGATATACTCCCTCTTTCCCAA 59.764 40.741 0.00 0.00 0.00 4.12
4886 5526 6.726299 CACTATGATATACTCCCTCTTTCCCA 59.274 42.308 0.00 0.00 0.00 4.37
4887 5527 6.954684 TCACTATGATATACTCCCTCTTTCCC 59.045 42.308 0.00 0.00 0.00 3.97
4888 5528 8.474025 CATCACTATGATATACTCCCTCTTTCC 58.526 40.741 0.00 0.00 34.28 3.13
4889 5529 9.030452 ACATCACTATGATATACTCCCTCTTTC 57.970 37.037 0.00 0.00 34.28 2.62
4890 5530 8.964533 ACATCACTATGATATACTCCCTCTTT 57.035 34.615 0.00 0.00 34.28 2.52
4891 5531 7.617723 GGACATCACTATGATATACTCCCTCTT 59.382 40.741 0.00 0.00 34.28 2.85
4892 5532 7.122715 GGACATCACTATGATATACTCCCTCT 58.877 42.308 0.00 0.00 34.28 3.69
4893 5533 6.892456 TGGACATCACTATGATATACTCCCTC 59.108 42.308 0.00 0.00 34.28 4.30
4894 5534 6.805150 TGGACATCACTATGATATACTCCCT 58.195 40.000 0.00 0.00 34.28 4.20
4895 5535 7.482169 TTGGACATCACTATGATATACTCCC 57.518 40.000 0.00 0.00 34.28 4.30
4896 5536 8.037758 CCTTTGGACATCACTATGATATACTCC 58.962 40.741 0.00 0.00 34.28 3.85
4897 5537 8.037758 CCCTTTGGACATCACTATGATATACTC 58.962 40.741 0.00 0.00 34.28 2.59
4898 5538 7.038017 CCCCTTTGGACATCACTATGATATACT 60.038 40.741 0.00 0.00 33.21 2.12
4899 5539 7.106239 CCCCTTTGGACATCACTATGATATAC 58.894 42.308 0.00 0.00 33.21 1.47
4900 5540 6.792473 ACCCCTTTGGACATCACTATGATATA 59.208 38.462 0.00 0.00 34.79 0.86
4901 5541 5.612688 ACCCCTTTGGACATCACTATGATAT 59.387 40.000 0.00 0.00 34.79 1.63
4902 5542 4.975147 ACCCCTTTGGACATCACTATGATA 59.025 41.667 0.00 0.00 34.79 2.15
4903 5543 3.788142 ACCCCTTTGGACATCACTATGAT 59.212 43.478 0.00 0.00 36.15 2.45
4904 5544 3.189606 ACCCCTTTGGACATCACTATGA 58.810 45.455 0.00 0.00 35.72 2.15
4905 5545 3.652057 ACCCCTTTGGACATCACTATG 57.348 47.619 0.00 0.00 37.00 2.23
4906 5546 4.166144 CCTTACCCCTTTGGACATCACTAT 59.834 45.833 0.00 0.00 38.00 2.12
4907 5547 3.521937 CCTTACCCCTTTGGACATCACTA 59.478 47.826 0.00 0.00 38.00 2.74
4908 5548 2.308866 CCTTACCCCTTTGGACATCACT 59.691 50.000 0.00 0.00 38.00 3.41
4909 5549 2.620627 CCCTTACCCCTTTGGACATCAC 60.621 54.545 0.00 0.00 38.00 3.06
4910 5550 1.638589 CCCTTACCCCTTTGGACATCA 59.361 52.381 0.00 0.00 38.00 3.07
4911 5551 1.920351 TCCCTTACCCCTTTGGACATC 59.080 52.381 0.00 0.00 38.00 3.06
4912 5552 2.068831 TCCCTTACCCCTTTGGACAT 57.931 50.000 0.00 0.00 38.00 3.06
4913 5553 1.835895 TTCCCTTACCCCTTTGGACA 58.164 50.000 0.00 0.00 38.00 4.02
4914 5554 2.158430 TGTTTCCCTTACCCCTTTGGAC 60.158 50.000 0.00 0.00 38.00 4.02
4915 5555 2.109304 CTGTTTCCCTTACCCCTTTGGA 59.891 50.000 0.00 0.00 38.00 3.53
4916 5556 2.109304 TCTGTTTCCCTTACCCCTTTGG 59.891 50.000 0.00 0.00 41.37 3.28
4917 5557 3.518992 TCTGTTTCCCTTACCCCTTTG 57.481 47.619 0.00 0.00 0.00 2.77
4918 5558 3.401342 ACATCTGTTTCCCTTACCCCTTT 59.599 43.478 0.00 0.00 0.00 3.11
4919 5559 2.993863 ACATCTGTTTCCCTTACCCCTT 59.006 45.455 0.00 0.00 0.00 3.95
4920 5560 2.576648 GACATCTGTTTCCCTTACCCCT 59.423 50.000 0.00 0.00 0.00 4.79
4921 5561 2.576648 AGACATCTGTTTCCCTTACCCC 59.423 50.000 0.00 0.00 0.00 4.95
4922 5562 4.470304 AGTAGACATCTGTTTCCCTTACCC 59.530 45.833 0.00 0.00 0.00 3.69
4923 5563 5.678955 AGTAGACATCTGTTTCCCTTACC 57.321 43.478 0.00 0.00 0.00 2.85
4924 5564 9.747293 GTTATAGTAGACATCTGTTTCCCTTAC 57.253 37.037 0.00 0.00 0.00 2.34
4925 5565 8.921205 GGTTATAGTAGACATCTGTTTCCCTTA 58.079 37.037 0.00 0.00 0.00 2.69
4926 5566 7.402071 TGGTTATAGTAGACATCTGTTTCCCTT 59.598 37.037 0.00 0.00 0.00 3.95
4927 5567 6.901300 TGGTTATAGTAGACATCTGTTTCCCT 59.099 38.462 0.00 0.00 0.00 4.20
4928 5568 7.120923 TGGTTATAGTAGACATCTGTTTCCC 57.879 40.000 0.00 0.00 0.00 3.97
4929 5569 9.614792 ATTTGGTTATAGTAGACATCTGTTTCC 57.385 33.333 0.00 0.00 0.00 3.13
4966 5606 9.699410 TTTGGGTTCATCATATAGTTCTTCAAT 57.301 29.630 0.00 0.00 0.00 2.57
4967 5607 9.527157 TTTTGGGTTCATCATATAGTTCTTCAA 57.473 29.630 0.00 0.00 0.00 2.69
4968 5608 9.699410 ATTTTGGGTTCATCATATAGTTCTTCA 57.301 29.630 0.00 0.00 0.00 3.02
4971 5611 9.927081 AGAATTTTGGGTTCATCATATAGTTCT 57.073 29.630 0.00 0.00 0.00 3.01
4974 5614 9.479549 ACAAGAATTTTGGGTTCATCATATAGT 57.520 29.630 5.68 0.00 0.00 2.12
4975 5615 9.956720 GACAAGAATTTTGGGTTCATCATATAG 57.043 33.333 5.68 0.00 0.00 1.31
4976 5616 9.699410 AGACAAGAATTTTGGGTTCATCATATA 57.301 29.630 5.68 0.00 0.00 0.86
4977 5617 8.599624 AGACAAGAATTTTGGGTTCATCATAT 57.400 30.769 5.68 0.00 0.00 1.78
4978 5618 8.306038 CAAGACAAGAATTTTGGGTTCATCATA 58.694 33.333 5.68 0.00 0.00 2.15
4979 5619 6.923199 AGACAAGAATTTTGGGTTCATCAT 57.077 33.333 5.68 0.00 0.00 2.45
4980 5620 6.462768 CCAAGACAAGAATTTTGGGTTCATCA 60.463 38.462 0.00 0.00 37.11 3.07
4981 5621 5.928264 CCAAGACAAGAATTTTGGGTTCATC 59.072 40.000 0.00 0.00 37.11 2.92
4982 5622 5.602145 TCCAAGACAAGAATTTTGGGTTCAT 59.398 36.000 4.84 0.00 40.33 2.57
4983 5623 4.959210 TCCAAGACAAGAATTTTGGGTTCA 59.041 37.500 4.84 0.00 40.33 3.18
4984 5624 5.529581 TCCAAGACAAGAATTTTGGGTTC 57.470 39.130 4.84 0.00 40.33 3.62
4985 5625 6.499106 AATCCAAGACAAGAATTTTGGGTT 57.501 33.333 4.84 1.58 38.77 4.11
4986 5626 6.126796 ACAAATCCAAGACAAGAATTTTGGGT 60.127 34.615 4.84 0.00 40.33 4.51
4987 5627 6.290605 ACAAATCCAAGACAAGAATTTTGGG 58.709 36.000 4.84 0.00 40.33 4.12
4988 5628 6.424812 GGACAAATCCAAGACAAGAATTTTGG 59.575 38.462 0.00 0.00 45.47 3.28
4989 5629 7.412137 GGACAAATCCAAGACAAGAATTTTG 57.588 36.000 0.00 0.00 45.47 2.44
5060 5700 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
5061 5701 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
5062 5702 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5063 5703 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5064 5704 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5065 5705 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5066 5706 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5067 5707 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5068 5708 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5069 5709 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5070 5710 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5071 5711 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5072 5712 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5073 5713 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5074 5714 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5075 5715 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5076 5716 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5077 5717 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5078 5718 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5079 5719 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5080 5720 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
5081 5721 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
5082 5722 2.178325 TGATATACTCCCTCCGTCCCAA 59.822 50.000 0.00 0.00 0.00 4.12
5083 5723 1.784593 TGATATACTCCCTCCGTCCCA 59.215 52.381 0.00 0.00 0.00 4.37
5084 5724 2.599408 TGATATACTCCCTCCGTCCC 57.401 55.000 0.00 0.00 0.00 4.46
5191 5831 9.599866 CTATGTATGGAACTATTCTTGTGTTCA 57.400 33.333 0.00 0.00 41.07 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.