Multiple sequence alignment - TraesCS2D01G268400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G268400 chr2D 100.000 3419 0 0 1 3419 328467909 328471327 0.000000e+00 6314.0
1 TraesCS2D01G268400 chr2D 97.345 113 3 0 1718 1830 328469512 328469624 3.480000e-45 193.0
2 TraesCS2D01G268400 chr2D 97.345 113 3 0 1604 1716 328469626 328469738 3.480000e-45 193.0
3 TraesCS2D01G268400 chr2D 90.278 144 3 1 3276 3419 328493767 328493899 9.750000e-41 178.0
4 TraesCS2D01G268400 chr2D 95.098 102 4 1 3176 3277 328470961 328471061 3.530000e-35 159.0
5 TraesCS2D01G268400 chr2D 95.098 102 4 1 3053 3153 328471084 328471185 3.530000e-35 159.0
6 TraesCS2D01G268400 chr2D 100.000 36 0 0 3147 3182 328494713 328494748 2.200000e-07 67.6
7 TraesCS2D01G268400 chr2D 100.000 31 0 0 3005 3035 600577404 600577374 1.330000e-04 58.4
8 TraesCS2D01G268400 chr2A 89.209 1770 65 31 1 1716 434983702 434985399 0.000000e+00 2095.0
9 TraesCS2D01G268400 chr2A 94.049 1294 40 13 1718 3004 434985284 434986547 0.000000e+00 1929.0
10 TraesCS2D01G268400 chr2B 92.289 1206 36 18 548 1716 397604029 397605214 0.000000e+00 1659.0
11 TraesCS2D01G268400 chr2B 95.811 931 24 5 1867 2797 397606069 397606984 0.000000e+00 1489.0
12 TraesCS2D01G268400 chr2B 87.695 577 37 19 1 551 397603183 397603751 2.880000e-180 641.0
13 TraesCS2D01G268400 chr2B 90.610 213 14 4 2798 3004 397607157 397607369 9.340000e-71 278.0
14 TraesCS2D01G268400 chr2B 98.667 150 2 0 1718 1867 397605102 397605251 2.020000e-67 267.0
15 TraesCS2D01G268400 chr2B 100.000 31 0 0 3005 3035 796167576 796167606 1.330000e-04 58.4
16 TraesCS2D01G268400 chr4A 91.034 145 2 1 3275 3419 574193211 574193078 5.830000e-43 185.0
17 TraesCS2D01G268400 chr4A 83.333 174 18 9 147 311 655628491 655628320 2.130000e-32 150.0
18 TraesCS2D01G268400 chr4A 85.075 67 9 1 393 458 624432553 624432487 2.200000e-07 67.6
19 TraesCS2D01G268400 chr1A 90.972 144 2 1 3276 3419 323625248 323625116 2.100000e-42 183.0
20 TraesCS2D01G268400 chr1A 90.278 144 3 1 3276 3419 459175904 459176036 9.750000e-41 178.0
21 TraesCS2D01G268400 chr1A 88.194 144 6 1 3276 3419 459159179 459159311 9.820000e-36 161.0
22 TraesCS2D01G268400 chr3D 90.278 144 3 1 3276 3419 537651451 537651319 9.750000e-41 178.0
23 TraesCS2D01G268400 chr3D 100.000 28 0 0 3005 3032 573126115 573126142 6.000000e-03 52.8
24 TraesCS2D01G268400 chr1D 89.583 144 4 1 3276 3419 202400514 202400382 4.540000e-39 172.0
25 TraesCS2D01G268400 chr1D 89.583 144 4 1 3276 3419 475962159 475962291 4.540000e-39 172.0
26 TraesCS2D01G268400 chr1D 88.732 142 5 1 3278 3419 202406003 202405873 2.730000e-36 163.0
27 TraesCS2D01G268400 chr6D 98.947 95 1 0 3276 3370 83821848 83821754 1.630000e-38 171.0
28 TraesCS2D01G268400 chr6D 88.889 144 5 1 3276 3419 29103331 29103199 2.110000e-37 167.0
29 TraesCS2D01G268400 chr6D 81.567 217 18 19 120 320 221003372 221003162 3.530000e-35 159.0
30 TraesCS2D01G268400 chr7A 88.966 145 5 1 3275 3419 115735893 115735760 5.870000e-38 169.0
31 TraesCS2D01G268400 chr7A 86.087 115 12 4 186 299 646554050 646553939 1.670000e-23 121.0
32 TraesCS2D01G268400 chr4D 88.889 144 5 1 3276 3419 30465991 30465859 2.110000e-37 167.0
33 TraesCS2D01G268400 chr5D 87.500 144 11 5 3276 3419 312931801 312931937 3.530000e-35 159.0
34 TraesCS2D01G268400 chr6B 76.203 374 44 26 120 458 396502009 396501646 4.570000e-34 156.0
35 TraesCS2D01G268400 chr1B 75.266 376 51 23 120 458 556972854 556972484 1.280000e-29 141.0
36 TraesCS2D01G268400 chrUn 85.315 143 10 7 3277 3419 267796172 267796041 1.650000e-28 137.0
37 TraesCS2D01G268400 chrUn 85.315 143 10 7 3277 3419 267803200 267803069 1.650000e-28 137.0
38 TraesCS2D01G268400 chr6A 80.526 190 21 14 137 317 302774018 302774200 7.700000e-27 132.0
39 TraesCS2D01G268400 chr5B 83.824 136 18 3 120 252 292166659 292166525 3.580000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G268400 chr2D 328467909 328471327 3418 False 1403.6 6314 96.9772 1 3419 5 chr2D.!!$F1 3418
1 TraesCS2D01G268400 chr2A 434983702 434986547 2845 False 2012.0 2095 91.6290 1 3004 2 chr2A.!!$F1 3003
2 TraesCS2D01G268400 chr2B 397603183 397607369 4186 False 866.8 1659 93.0144 1 3004 5 chr2B.!!$F2 3003


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
872 1215 0.388649 CAACTAACGTCCGCAGCTCT 60.389 55.0 0.0 0.0 0.00 4.09 F
1649 2033 0.035881 TGCAGTTTGGAGAGCAGAGG 59.964 55.0 0.0 0.0 32.48 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 3336 0.250424 CCTGCATCCATCCACGCATA 60.250 55.0 0.00 0.00 33.15 3.14 R
3253 4647 0.031716 ATCCTGGCAGAGCACTAGGA 60.032 55.0 17.94 2.76 38.39 2.94 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.823873 ACCCATTTTATGCACAACTCGAA 59.176 39.130 0.00 0.00 0.00 3.71
243 256 2.113860 ATGACATTCGTGGAAGGGTG 57.886 50.000 0.00 0.00 0.00 4.61
299 315 8.729805 TTGAAACTAAGCATTTTTGGAACATT 57.270 26.923 0.00 0.00 39.30 2.71
347 375 6.648502 ACAATTCGTGATGAAATTTTGCAAC 58.351 32.000 0.00 0.00 40.71 4.17
366 404 5.844301 CAACCATGCTCAAAATTTACCAC 57.156 39.130 0.00 0.00 0.00 4.16
367 405 5.295950 CAACCATGCTCAAAATTTACCACA 58.704 37.500 0.00 0.00 0.00 4.17
372 410 7.012232 ACCATGCTCAAAATTTACCACAAAAAG 59.988 33.333 0.00 0.00 0.00 2.27
601 919 9.965824 CAAATTTGGAGTAGTACAAAAATCACT 57.034 29.630 11.98 0.00 39.69 3.41
698 1026 3.179265 CCGCGAGCGTACACCAAG 61.179 66.667 8.23 0.00 37.81 3.61
699 1027 3.179265 CGCGAGCGTACACCAAGG 61.179 66.667 0.00 0.00 34.35 3.61
700 1028 3.488090 GCGAGCGTACACCAAGGC 61.488 66.667 0.00 0.00 0.00 4.35
701 1029 2.048597 CGAGCGTACACCAAGGCA 60.049 61.111 0.00 0.00 32.74 4.75
702 1030 2.094659 CGAGCGTACACCAAGGCAG 61.095 63.158 0.00 0.00 32.74 4.85
703 1031 1.292223 GAGCGTACACCAAGGCAGA 59.708 57.895 0.00 0.00 32.74 4.26
704 1032 0.737715 GAGCGTACACCAAGGCAGAG 60.738 60.000 0.00 0.00 32.74 3.35
705 1033 1.004918 GCGTACACCAAGGCAGAGT 60.005 57.895 0.00 0.00 0.00 3.24
712 1040 0.768221 ACCAAGGCAGAGTGAGGGAA 60.768 55.000 0.00 0.00 0.00 3.97
778 1106 1.342796 CGACTCGACTCGACTCGTCA 61.343 60.000 17.36 0.00 37.40 4.35
784 1127 2.179517 CTCGACTCGTCACTGCCC 59.820 66.667 0.00 0.00 0.00 5.36
785 1128 2.282251 TCGACTCGTCACTGCCCT 60.282 61.111 0.00 0.00 0.00 5.19
786 1129 2.179517 CGACTCGTCACTGCCCTC 59.820 66.667 0.00 0.00 0.00 4.30
787 1130 2.336478 CGACTCGTCACTGCCCTCT 61.336 63.158 0.00 0.00 0.00 3.69
788 1131 1.214062 GACTCGTCACTGCCCTCTG 59.786 63.158 0.00 0.00 0.00 3.35
789 1132 2.125753 CTCGTCACTGCCCTCTGC 60.126 66.667 0.00 0.00 41.77 4.26
790 1133 2.601666 TCGTCACTGCCCTCTGCT 60.602 61.111 0.00 0.00 42.00 4.24
791 1134 2.125753 CGTCACTGCCCTCTGCTC 60.126 66.667 0.00 0.00 42.00 4.26
792 1135 2.125753 GTCACTGCCCTCTGCTCG 60.126 66.667 0.00 0.00 42.00 5.03
793 1136 4.074526 TCACTGCCCTCTGCTCGC 62.075 66.667 0.00 0.00 42.00 5.03
798 1141 3.550431 GCCCTCTGCTCGCCCATA 61.550 66.667 0.00 0.00 36.87 2.74
799 1142 2.423446 CCCTCTGCTCGCCCATAC 59.577 66.667 0.00 0.00 0.00 2.39
800 1143 2.028190 CCTCTGCTCGCCCATACG 59.972 66.667 0.00 0.00 0.00 3.06
801 1144 2.028190 CTCTGCTCGCCCATACGG 59.972 66.667 0.00 0.00 0.00 4.02
861 1204 2.778679 GCTGCGCTCCAACTAACG 59.221 61.111 9.73 0.00 0.00 3.18
865 1208 2.442188 GCGCTCCAACTAACGTCCG 61.442 63.158 0.00 0.00 0.00 4.79
872 1215 0.388649 CAACTAACGTCCGCAGCTCT 60.389 55.000 0.00 0.00 0.00 4.09
929 1280 2.401351 CTTTCCTTCAAGCAAGCAAGC 58.599 47.619 0.00 0.00 0.00 4.01
930 1281 1.401761 TTCCTTCAAGCAAGCAAGCA 58.598 45.000 3.19 0.00 36.85 3.91
931 1282 1.401761 TCCTTCAAGCAAGCAAGCAA 58.598 45.000 3.19 0.00 36.85 3.91
932 1283 1.338973 TCCTTCAAGCAAGCAAGCAAG 59.661 47.619 3.19 0.00 36.85 4.01
996 1369 3.971702 GGCCCCTGACTGCTGGTT 61.972 66.667 0.00 0.00 0.00 3.67
1029 1402 1.227002 GGCGGACGAGAAGGTGATC 60.227 63.158 0.00 0.00 0.00 2.92
1238 1611 1.435577 GGCGGATTCAAGTACGTTGT 58.564 50.000 0.00 0.00 37.43 3.32
1258 1631 1.144936 CCCTCGCATCTTGACTCCC 59.855 63.158 0.00 0.00 0.00 4.30
1262 1635 2.514824 GCATCTTGACTCCCCCGC 60.515 66.667 0.00 0.00 0.00 6.13
1331 1704 2.108075 TCACCAATTCATGTCCCTGTGT 59.892 45.455 0.00 0.00 0.00 3.72
1332 1705 2.489329 CACCAATTCATGTCCCTGTGTC 59.511 50.000 0.00 0.00 0.00 3.67
1503 1877 0.248843 CCTCTCCTCTGCCTTCACAC 59.751 60.000 0.00 0.00 0.00 3.82
1507 1881 2.114616 CTCCTCTGCCTTCACACCTAT 58.885 52.381 0.00 0.00 0.00 2.57
1508 1882 1.833630 TCCTCTGCCTTCACACCTATG 59.166 52.381 0.00 0.00 0.00 2.23
1541 1925 9.740239 ACAATATTTTGCAGCTTAGTTATGATG 57.260 29.630 0.00 0.00 36.22 3.07
1564 1948 7.189693 TGATTATGAGCCTTTTTATGTAGCG 57.810 36.000 0.00 0.00 0.00 4.26
1613 1997 1.814394 TCGTTACTACTCCATGCGTGT 59.186 47.619 4.96 0.00 0.00 4.49
1614 1998 3.009026 TCGTTACTACTCCATGCGTGTA 58.991 45.455 4.96 0.00 0.00 2.90
1615 1999 3.103738 CGTTACTACTCCATGCGTGTAC 58.896 50.000 4.96 0.00 0.00 2.90
1616 2000 3.181503 CGTTACTACTCCATGCGTGTACT 60.182 47.826 4.96 0.00 0.00 2.73
1617 2001 4.034394 CGTTACTACTCCATGCGTGTACTA 59.966 45.833 4.96 0.00 0.00 1.82
1618 2002 5.447683 CGTTACTACTCCATGCGTGTACTAA 60.448 44.000 4.96 0.00 0.00 2.24
1619 2003 6.324819 GTTACTACTCCATGCGTGTACTAAA 58.675 40.000 4.96 0.00 0.00 1.85
1620 2004 5.593679 ACTACTCCATGCGTGTACTAAAT 57.406 39.130 4.96 0.00 0.00 1.40
1621 2005 5.589192 ACTACTCCATGCGTGTACTAAATC 58.411 41.667 4.96 0.00 0.00 2.17
1622 2006 3.793559 ACTCCATGCGTGTACTAAATCC 58.206 45.455 4.96 0.00 0.00 3.01
1623 2007 3.196901 ACTCCATGCGTGTACTAAATCCA 59.803 43.478 4.96 0.00 0.00 3.41
1624 2008 4.141711 ACTCCATGCGTGTACTAAATCCAT 60.142 41.667 4.96 0.00 0.00 3.41
1625 2009 4.126437 TCCATGCGTGTACTAAATCCATG 58.874 43.478 4.96 0.00 0.00 3.66
1626 2010 4.126437 CCATGCGTGTACTAAATCCATGA 58.874 43.478 4.96 0.00 32.53 3.07
1627 2011 4.212004 CCATGCGTGTACTAAATCCATGAG 59.788 45.833 4.96 0.00 32.53 2.90
1628 2012 4.465632 TGCGTGTACTAAATCCATGAGT 57.534 40.909 0.00 0.00 0.00 3.41
1629 2013 5.585820 TGCGTGTACTAAATCCATGAGTA 57.414 39.130 0.00 0.00 0.00 2.59
1630 2014 6.156748 TGCGTGTACTAAATCCATGAGTAT 57.843 37.500 0.00 0.00 0.00 2.12
1631 2015 5.983118 TGCGTGTACTAAATCCATGAGTATG 59.017 40.000 0.00 0.00 0.00 2.39
1632 2016 5.107453 GCGTGTACTAAATCCATGAGTATGC 60.107 44.000 0.00 0.00 32.79 3.14
1633 2017 5.983118 CGTGTACTAAATCCATGAGTATGCA 59.017 40.000 0.00 0.00 32.79 3.96
1634 2018 6.144563 CGTGTACTAAATCCATGAGTATGCAG 59.855 42.308 0.00 0.00 32.79 4.41
1635 2019 6.986817 GTGTACTAAATCCATGAGTATGCAGT 59.013 38.462 0.00 0.00 32.79 4.40
1636 2020 7.495934 GTGTACTAAATCCATGAGTATGCAGTT 59.504 37.037 0.00 0.00 32.79 3.16
1637 2021 8.046708 TGTACTAAATCCATGAGTATGCAGTTT 58.953 33.333 0.00 0.00 32.79 2.66
1638 2022 7.325660 ACTAAATCCATGAGTATGCAGTTTG 57.674 36.000 0.00 0.00 32.79 2.93
1639 2023 5.587388 AAATCCATGAGTATGCAGTTTGG 57.413 39.130 0.00 0.00 32.79 3.28
1640 2024 3.998913 TCCATGAGTATGCAGTTTGGA 57.001 42.857 0.00 0.00 32.79 3.53
1641 2025 3.877559 TCCATGAGTATGCAGTTTGGAG 58.122 45.455 0.00 0.00 32.79 3.86
1642 2026 3.519107 TCCATGAGTATGCAGTTTGGAGA 59.481 43.478 0.00 0.00 32.79 3.71
1643 2027 3.875727 CCATGAGTATGCAGTTTGGAGAG 59.124 47.826 0.00 0.00 32.79 3.20
1644 2028 2.977914 TGAGTATGCAGTTTGGAGAGC 58.022 47.619 0.00 0.00 0.00 4.09
1645 2029 2.302733 TGAGTATGCAGTTTGGAGAGCA 59.697 45.455 0.00 0.00 41.73 4.26
1646 2030 2.935201 GAGTATGCAGTTTGGAGAGCAG 59.065 50.000 0.00 0.00 40.71 4.24
1647 2031 2.568956 AGTATGCAGTTTGGAGAGCAGA 59.431 45.455 0.00 0.00 40.71 4.26
1648 2032 2.110901 ATGCAGTTTGGAGAGCAGAG 57.889 50.000 0.00 0.00 40.71 3.35
1649 2033 0.035881 TGCAGTTTGGAGAGCAGAGG 59.964 55.000 0.00 0.00 32.48 3.69
1650 2034 0.322975 GCAGTTTGGAGAGCAGAGGA 59.677 55.000 0.00 0.00 0.00 3.71
1651 2035 1.065564 GCAGTTTGGAGAGCAGAGGAT 60.066 52.381 0.00 0.00 0.00 3.24
1652 2036 2.169352 GCAGTTTGGAGAGCAGAGGATA 59.831 50.000 0.00 0.00 0.00 2.59
1653 2037 3.181456 GCAGTTTGGAGAGCAGAGGATAT 60.181 47.826 0.00 0.00 0.00 1.63
1654 2038 4.039730 GCAGTTTGGAGAGCAGAGGATATA 59.960 45.833 0.00 0.00 0.00 0.86
1655 2039 5.279910 GCAGTTTGGAGAGCAGAGGATATAT 60.280 44.000 0.00 0.00 0.00 0.86
1656 2040 6.071108 GCAGTTTGGAGAGCAGAGGATATATA 60.071 42.308 0.00 0.00 0.00 0.86
1657 2041 7.364585 GCAGTTTGGAGAGCAGAGGATATATAT 60.365 40.741 0.00 0.00 0.00 0.86
1658 2042 8.196771 CAGTTTGGAGAGCAGAGGATATATATC 58.803 40.741 13.50 13.50 0.00 1.63
1659 2043 7.898100 AGTTTGGAGAGCAGAGGATATATATCA 59.102 37.037 21.50 0.00 34.40 2.15
1660 2044 7.894753 TTGGAGAGCAGAGGATATATATCAG 57.105 40.000 21.50 10.79 34.40 2.90
1661 2045 6.979418 TGGAGAGCAGAGGATATATATCAGT 58.021 40.000 21.50 10.10 34.40 3.41
1662 2046 8.107196 TGGAGAGCAGAGGATATATATCAGTA 57.893 38.462 21.50 0.00 34.40 2.74
1663 2047 8.217111 TGGAGAGCAGAGGATATATATCAGTAG 58.783 40.741 21.50 11.08 34.40 2.57
1664 2048 7.665559 GGAGAGCAGAGGATATATATCAGTAGG 59.334 44.444 21.50 9.65 34.40 3.18
1665 2049 8.113114 AGAGCAGAGGATATATATCAGTAGGT 57.887 38.462 21.50 14.20 34.40 3.08
1666 2050 8.565239 AGAGCAGAGGATATATATCAGTAGGTT 58.435 37.037 21.50 7.20 34.40 3.50
1667 2051 9.196139 GAGCAGAGGATATATATCAGTAGGTTT 57.804 37.037 21.50 3.21 34.40 3.27
1668 2052 9.554053 AGCAGAGGATATATATCAGTAGGTTTT 57.446 33.333 21.50 0.00 34.40 2.43
1707 2091 8.925161 TTTGTAAGACTTTTGATTTGTTCCAG 57.075 30.769 0.00 0.00 0.00 3.86
1708 2092 6.503524 TGTAAGACTTTTGATTTGTTCCAGC 58.496 36.000 0.00 0.00 0.00 4.85
1709 2093 5.859205 AAGACTTTTGATTTGTTCCAGCT 57.141 34.783 0.00 0.00 0.00 4.24
1710 2094 6.959639 AAGACTTTTGATTTGTTCCAGCTA 57.040 33.333 0.00 0.00 0.00 3.32
1711 2095 6.959639 AGACTTTTGATTTGTTCCAGCTAA 57.040 33.333 0.00 0.00 0.00 3.09
1712 2096 6.739112 AGACTTTTGATTTGTTCCAGCTAAC 58.261 36.000 0.00 0.00 0.00 2.34
1713 2097 6.547510 AGACTTTTGATTTGTTCCAGCTAACT 59.452 34.615 1.29 0.00 0.00 2.24
1714 2098 7.719633 AGACTTTTGATTTGTTCCAGCTAACTA 59.280 33.333 1.29 0.00 0.00 2.24
1715 2099 8.232913 ACTTTTGATTTGTTCCAGCTAACTAA 57.767 30.769 1.29 0.55 0.00 2.24
1716 2100 8.860088 ACTTTTGATTTGTTCCAGCTAACTAAT 58.140 29.630 8.25 8.25 37.46 1.73
1717 2101 9.696917 CTTTTGATTTGTTCCAGCTAACTAATT 57.303 29.630 9.44 0.00 35.76 1.40
1718 2102 9.691362 TTTTGATTTGTTCCAGCTAACTAATTC 57.309 29.630 9.44 5.43 35.76 2.17
1719 2103 7.391148 TGATTTGTTCCAGCTAACTAATTCC 57.609 36.000 9.44 1.57 35.76 3.01
1720 2104 6.945435 TGATTTGTTCCAGCTAACTAATTCCA 59.055 34.615 9.44 3.53 35.76 3.53
1721 2105 7.615365 TGATTTGTTCCAGCTAACTAATTCCAT 59.385 33.333 9.44 0.00 35.76 3.41
1722 2106 6.757897 TTGTTCCAGCTAACTAATTCCATG 57.242 37.500 1.29 0.00 0.00 3.66
1723 2107 4.640201 TGTTCCAGCTAACTAATTCCATGC 59.360 41.667 1.29 0.00 0.00 4.06
1724 2108 3.466836 TCCAGCTAACTAATTCCATGCG 58.533 45.455 0.00 0.00 0.00 4.73
1725 2109 3.118408 TCCAGCTAACTAATTCCATGCGT 60.118 43.478 0.00 0.00 0.00 5.24
1726 2110 3.002656 CCAGCTAACTAATTCCATGCGTG 59.997 47.826 0.00 0.00 0.00 5.34
1841 2229 4.933400 CCAGCTAACTAACCGCTTTAGAAA 59.067 41.667 8.52 0.00 39.89 2.52
1902 3108 8.896722 AAGATCATACCCCGTAATAAGATACT 57.103 34.615 0.00 0.00 0.00 2.12
1903 3109 8.522542 AGATCATACCCCGTAATAAGATACTC 57.477 38.462 0.00 0.00 0.00 2.59
1904 3110 7.560626 AGATCATACCCCGTAATAAGATACTCC 59.439 40.741 0.00 0.00 0.00 3.85
1978 3184 2.452600 ATGTTTGCCCCGGACATAAT 57.547 45.000 0.73 0.00 32.58 1.28
2017 3229 3.947834 GGTATTGATTTGTCCACCCTCAG 59.052 47.826 0.00 0.00 0.00 3.35
2018 3230 3.814504 ATTGATTTGTCCACCCTCAGT 57.185 42.857 0.00 0.00 0.00 3.41
2019 3231 3.593442 TTGATTTGTCCACCCTCAGTT 57.407 42.857 0.00 0.00 0.00 3.16
2020 3232 3.140325 TGATTTGTCCACCCTCAGTTC 57.860 47.619 0.00 0.00 0.00 3.01
2021 3233 2.441375 TGATTTGTCCACCCTCAGTTCA 59.559 45.455 0.00 0.00 0.00 3.18
2068 3280 5.542779 AGCTTTCCTGTACTGTAGAACTTG 58.457 41.667 0.00 0.00 0.00 3.16
2069 3281 4.152580 GCTTTCCTGTACTGTAGAACTTGC 59.847 45.833 0.00 0.00 0.00 4.01
2070 3282 4.948341 TTCCTGTACTGTAGAACTTGCA 57.052 40.909 0.00 0.00 0.00 4.08
2071 3283 4.252971 TCCTGTACTGTAGAACTTGCAC 57.747 45.455 0.00 0.00 0.00 4.57
2072 3284 3.639561 TCCTGTACTGTAGAACTTGCACA 59.360 43.478 0.00 0.00 0.00 4.57
2098 3310 1.228154 GACGGGAAACAGTTGGCCT 60.228 57.895 3.32 0.00 39.51 5.19
2124 3336 5.789643 ATTCATGCTAATTAACCCGCAAT 57.210 34.783 1.73 0.00 35.83 3.56
2307 3519 4.052229 ACCTTCGGCTCCGTCGTG 62.052 66.667 8.28 0.00 40.74 4.35
2530 3742 3.554324 TGTAGGCGAACGAAATAATCTGC 59.446 43.478 0.00 0.00 0.00 4.26
2667 3879 5.131594 TCATTGATGCGTTCCAAAAATGA 57.868 34.783 0.00 0.00 37.17 2.57
2778 3990 6.783892 TTGAAGCAAAGCAAAATCAATACC 57.216 33.333 0.00 0.00 0.00 2.73
2795 4007 6.239396 TCAATACCCTTTCCGTTCACAAATA 58.761 36.000 0.00 0.00 0.00 1.40
2796 4008 6.149807 TCAATACCCTTTCCGTTCACAAATAC 59.850 38.462 0.00 0.00 0.00 1.89
2797 4009 2.809696 ACCCTTTCCGTTCACAAATACG 59.190 45.455 0.00 0.00 37.50 3.06
2798 4010 2.809696 CCCTTTCCGTTCACAAATACGT 59.190 45.455 0.00 0.00 36.09 3.57
2857 4246 7.116233 GTGTGTTTGTTCACTCAACTCATTTTT 59.884 33.333 0.00 0.00 38.90 1.94
2858 4247 7.328249 TGTGTTTGTTCACTCAACTCATTTTTC 59.672 33.333 0.00 0.00 38.90 2.29
2859 4248 6.526325 TGTTTGTTCACTCAACTCATTTTTCG 59.474 34.615 0.00 0.00 35.79 3.46
2920 4314 8.581253 AGGAGGGAGTATTTCACAAAATAAAG 57.419 34.615 0.00 0.00 38.68 1.85
2932 4326 6.053005 TCACAAAATAAAGACGGAACTGAGT 58.947 36.000 0.00 0.00 0.00 3.41
3004 4398 3.906008 CGAGGAGTTAAATGCACAAAACG 59.094 43.478 0.00 0.00 0.00 3.60
3005 4399 4.319190 CGAGGAGTTAAATGCACAAAACGA 60.319 41.667 0.00 0.00 0.00 3.85
3006 4400 5.108385 AGGAGTTAAATGCACAAAACGAG 57.892 39.130 0.00 0.00 0.00 4.18
3007 4401 4.578928 AGGAGTTAAATGCACAAAACGAGT 59.421 37.500 0.00 0.00 0.00 4.18
3008 4402 5.761234 AGGAGTTAAATGCACAAAACGAGTA 59.239 36.000 0.00 0.00 0.00 2.59
3009 4403 6.261381 AGGAGTTAAATGCACAAAACGAGTAA 59.739 34.615 0.00 0.00 0.00 2.24
3010 4404 6.913673 GGAGTTAAATGCACAAAACGAGTAAA 59.086 34.615 0.00 0.00 0.00 2.01
3011 4405 7.593644 GGAGTTAAATGCACAAAACGAGTAAAT 59.406 33.333 0.00 0.00 0.00 1.40
3012 4406 9.601971 GAGTTAAATGCACAAAACGAGTAAATA 57.398 29.630 0.00 0.00 0.00 1.40
3013 4407 9.607285 AGTTAAATGCACAAAACGAGTAAATAG 57.393 29.630 0.00 0.00 0.00 1.73
3014 4408 6.927933 AAATGCACAAAACGAGTAAATAGC 57.072 33.333 0.00 0.00 0.00 2.97
3015 4409 5.621197 ATGCACAAAACGAGTAAATAGCA 57.379 34.783 0.00 0.00 0.00 3.49
3016 4410 5.425577 TGCACAAAACGAGTAAATAGCAA 57.574 34.783 0.00 0.00 0.00 3.91
3017 4411 5.822278 TGCACAAAACGAGTAAATAGCAAA 58.178 33.333 0.00 0.00 0.00 3.68
3018 4412 6.266323 TGCACAAAACGAGTAAATAGCAAAA 58.734 32.000 0.00 0.00 0.00 2.44
3019 4413 6.752351 TGCACAAAACGAGTAAATAGCAAAAA 59.248 30.769 0.00 0.00 0.00 1.94
3020 4414 7.043722 TGCACAAAACGAGTAAATAGCAAAAAG 60.044 33.333 0.00 0.00 0.00 2.27
3021 4415 7.273659 CACAAAACGAGTAAATAGCAAAAAGC 58.726 34.615 0.00 0.00 46.19 3.51
3035 4429 5.371115 GCAAAAAGCTACCACATTACAGA 57.629 39.130 0.00 0.00 41.15 3.41
3036 4430 5.154222 GCAAAAAGCTACCACATTACAGAC 58.846 41.667 0.00 0.00 41.15 3.51
3037 4431 5.382303 CAAAAAGCTACCACATTACAGACG 58.618 41.667 0.00 0.00 0.00 4.18
3038 4432 2.961526 AGCTACCACATTACAGACGG 57.038 50.000 0.00 0.00 0.00 4.79
3039 4433 2.453521 AGCTACCACATTACAGACGGA 58.546 47.619 0.00 0.00 0.00 4.69
3040 4434 3.031736 AGCTACCACATTACAGACGGAT 58.968 45.455 0.00 0.00 0.00 4.18
3041 4435 4.212716 AGCTACCACATTACAGACGGATA 58.787 43.478 0.00 0.00 0.00 2.59
3042 4436 4.833380 AGCTACCACATTACAGACGGATAT 59.167 41.667 0.00 0.00 0.00 1.63
3043 4437 4.923871 GCTACCACATTACAGACGGATATG 59.076 45.833 0.00 0.00 0.00 1.78
3044 4438 5.509163 GCTACCACATTACAGACGGATATGT 60.509 44.000 0.00 0.00 33.89 2.29
3045 4439 4.945246 ACCACATTACAGACGGATATGTC 58.055 43.478 0.00 0.00 39.21 3.06
3046 4440 4.202223 ACCACATTACAGACGGATATGTCC 60.202 45.833 0.00 0.00 39.77 4.02
3047 4441 4.202212 CCACATTACAGACGGATATGTCCA 60.202 45.833 9.40 0.00 45.37 4.02
3048 4442 5.511373 CCACATTACAGACGGATATGTCCAT 60.511 44.000 9.40 0.00 45.37 3.41
3049 4443 5.991606 CACATTACAGACGGATATGTCCATT 59.008 40.000 9.40 0.00 45.37 3.16
3050 4444 6.146184 CACATTACAGACGGATATGTCCATTC 59.854 42.308 9.40 4.31 45.37 2.67
3051 4445 3.753294 ACAGACGGATATGTCCATTCC 57.247 47.619 9.40 0.00 45.37 3.01
3052 4446 3.309296 ACAGACGGATATGTCCATTCCT 58.691 45.455 9.40 0.00 45.37 3.36
3053 4447 3.070159 ACAGACGGATATGTCCATTCCTG 59.930 47.826 9.40 10.95 45.37 3.86
3054 4448 3.321968 CAGACGGATATGTCCATTCCTGA 59.678 47.826 9.40 0.00 45.37 3.86
3055 4449 3.576118 AGACGGATATGTCCATTCCTGAG 59.424 47.826 9.40 0.00 45.37 3.35
3056 4450 2.634940 ACGGATATGTCCATTCCTGAGG 59.365 50.000 9.40 0.00 45.37 3.86
3057 4451 2.899900 CGGATATGTCCATTCCTGAGGA 59.100 50.000 9.40 0.00 45.37 3.71
3058 4452 3.517100 CGGATATGTCCATTCCTGAGGAT 59.483 47.826 0.04 0.00 45.37 3.24
3059 4453 4.019860 CGGATATGTCCATTCCTGAGGATT 60.020 45.833 0.04 0.00 45.37 3.01
3060 4454 5.513788 CGGATATGTCCATTCCTGAGGATTT 60.514 44.000 0.04 0.00 45.37 2.17
3061 4455 5.942826 GGATATGTCCATTCCTGAGGATTTC 59.057 44.000 0.04 0.00 44.42 2.17
3062 4456 3.652057 TGTCCATTCCTGAGGATTTCC 57.348 47.619 0.04 0.00 36.11 3.13
3063 4457 9.121476 GGATATGTCCATTCCTGAGGATTTCCT 62.121 44.444 0.04 0.00 46.33 3.36
3090 4484 2.801077 AACTACCACATTACAGGCCC 57.199 50.000 0.00 0.00 0.00 5.80
3091 4485 0.539986 ACTACCACATTACAGGCCCG 59.460 55.000 0.00 0.00 0.00 6.13
3092 4486 0.179056 CTACCACATTACAGGCCCGG 60.179 60.000 0.00 0.00 0.00 5.73
3093 4487 2.260088 TACCACATTACAGGCCCGGC 62.260 60.000 0.00 0.00 0.00 6.13
3094 4488 3.202001 CACATTACAGGCCCGGCG 61.202 66.667 0.00 0.00 0.00 6.46
3095 4489 3.395702 ACATTACAGGCCCGGCGA 61.396 61.111 9.30 0.00 0.00 5.54
3096 4490 2.124901 CATTACAGGCCCGGCGAA 60.125 61.111 9.30 0.00 0.00 4.70
3097 4491 1.525995 CATTACAGGCCCGGCGAAT 60.526 57.895 9.30 0.00 0.00 3.34
3098 4492 0.250124 CATTACAGGCCCGGCGAATA 60.250 55.000 9.30 0.00 0.00 1.75
3099 4493 0.690762 ATTACAGGCCCGGCGAATAT 59.309 50.000 9.30 0.00 0.00 1.28
3100 4494 0.250124 TTACAGGCCCGGCGAATATG 60.250 55.000 9.30 4.40 0.00 1.78
3101 4495 1.404479 TACAGGCCCGGCGAATATGT 61.404 55.000 9.30 10.64 0.00 2.29
3102 4496 1.961277 CAGGCCCGGCGAATATGTC 60.961 63.158 9.30 0.00 0.00 3.06
3103 4497 2.668550 GGCCCGGCGAATATGTCC 60.669 66.667 9.30 0.00 0.00 4.02
3104 4498 2.110213 GCCCGGCGAATATGTCCA 59.890 61.111 9.30 0.00 0.00 4.02
3105 4499 1.302511 GCCCGGCGAATATGTCCAT 60.303 57.895 9.30 0.00 0.00 3.41
3106 4500 0.889186 GCCCGGCGAATATGTCCATT 60.889 55.000 9.30 0.00 0.00 3.16
3107 4501 1.156736 CCCGGCGAATATGTCCATTC 58.843 55.000 9.30 0.00 0.00 2.67
3108 4502 1.542328 CCCGGCGAATATGTCCATTCA 60.542 52.381 9.30 0.00 35.09 2.57
3109 4503 1.800586 CCGGCGAATATGTCCATTCAG 59.199 52.381 9.30 0.00 35.09 3.02
3110 4504 1.800586 CGGCGAATATGTCCATTCAGG 59.199 52.381 0.00 0.00 35.09 3.86
3111 4505 1.537202 GGCGAATATGTCCATTCAGGC 59.463 52.381 0.00 0.00 35.09 4.85
3112 4506 1.195448 GCGAATATGTCCATTCAGGCG 59.805 52.381 0.00 0.00 35.09 5.52
3113 4507 2.483876 CGAATATGTCCATTCAGGCGT 58.516 47.619 0.00 0.00 35.09 5.68
3114 4508 2.872245 CGAATATGTCCATTCAGGCGTT 59.128 45.455 0.00 0.00 35.09 4.84
3115 4509 3.059597 CGAATATGTCCATTCAGGCGTTC 60.060 47.826 0.00 0.00 35.09 3.95
3116 4510 3.845781 ATATGTCCATTCAGGCGTTCT 57.154 42.857 0.00 0.00 37.29 3.01
3117 4511 2.496899 ATGTCCATTCAGGCGTTCTT 57.503 45.000 0.00 0.00 37.29 2.52
3118 4512 1.808411 TGTCCATTCAGGCGTTCTTC 58.192 50.000 0.00 0.00 37.29 2.87
3119 4513 1.087501 GTCCATTCAGGCGTTCTTCC 58.912 55.000 0.00 0.00 37.29 3.46
3120 4514 0.035439 TCCATTCAGGCGTTCTTCCC 60.035 55.000 0.00 0.00 37.29 3.97
3121 4515 0.035056 CCATTCAGGCGTTCTTCCCT 60.035 55.000 0.00 0.00 0.00 4.20
3125 4519 3.393360 AGGCGTTCTTCCCTGAGG 58.607 61.111 0.00 0.00 0.00 3.86
3126 4520 1.229209 AGGCGTTCTTCCCTGAGGA 60.229 57.895 0.00 0.00 41.88 3.71
3127 4521 0.618968 AGGCGTTCTTCCCTGAGGAT 60.619 55.000 0.00 0.00 43.54 3.24
3128 4522 0.253327 GGCGTTCTTCCCTGAGGATT 59.747 55.000 0.00 0.00 43.54 3.01
3129 4523 1.340114 GGCGTTCTTCCCTGAGGATTT 60.340 52.381 0.00 0.00 43.54 2.17
3130 4524 2.010497 GCGTTCTTCCCTGAGGATTTC 58.990 52.381 0.00 0.00 43.54 2.17
3131 4525 2.633488 CGTTCTTCCCTGAGGATTTCC 58.367 52.381 0.00 0.00 43.54 3.13
3142 4536 2.998316 AGGATTTCCTAGTGCTCTGC 57.002 50.000 0.00 0.00 46.48 4.26
3143 4537 1.488393 AGGATTTCCTAGTGCTCTGCC 59.512 52.381 0.00 0.00 46.48 4.85
3144 4538 1.576356 GATTTCCTAGTGCTCTGCCG 58.424 55.000 0.00 0.00 0.00 5.69
3145 4539 0.179000 ATTTCCTAGTGCTCTGCCGG 59.821 55.000 0.00 0.00 0.00 6.13
3146 4540 1.899437 TTTCCTAGTGCTCTGCCGGG 61.899 60.000 2.18 0.00 0.00 5.73
3147 4541 2.759973 CCTAGTGCTCTGCCGGGA 60.760 66.667 2.18 0.00 0.00 5.14
3148 4542 2.136878 CCTAGTGCTCTGCCGGGAT 61.137 63.158 2.18 0.00 0.00 3.85
3149 4543 1.068753 CTAGTGCTCTGCCGGGATG 59.931 63.158 2.18 0.00 0.00 3.51
3150 4544 2.374830 CTAGTGCTCTGCCGGGATGG 62.375 65.000 2.18 0.00 42.50 3.51
3151 4545 4.101448 GTGCTCTGCCGGGATGGT 62.101 66.667 2.18 0.00 41.21 3.55
3152 4546 4.100084 TGCTCTGCCGGGATGGTG 62.100 66.667 2.18 0.00 41.21 4.17
3176 4570 3.630148 GCGATCGGATGGTGCGTG 61.630 66.667 18.30 0.00 31.47 5.34
3177 4571 2.104132 CGATCGGATGGTGCGTGA 59.896 61.111 7.38 0.00 31.47 4.35
3178 4572 1.946156 CGATCGGATGGTGCGTGAG 60.946 63.158 7.38 0.00 31.47 3.51
3179 4573 1.592669 GATCGGATGGTGCGTGAGG 60.593 63.158 0.00 0.00 31.47 3.86
3180 4574 2.978452 GATCGGATGGTGCGTGAGGG 62.978 65.000 0.00 0.00 31.47 4.30
3181 4575 3.770040 CGGATGGTGCGTGAGGGA 61.770 66.667 0.00 0.00 0.00 4.20
3182 4576 2.911143 GGATGGTGCGTGAGGGAT 59.089 61.111 0.00 0.00 0.00 3.85
3183 4577 1.224592 GGATGGTGCGTGAGGGATT 59.775 57.895 0.00 0.00 0.00 3.01
3184 4578 0.394352 GGATGGTGCGTGAGGGATTT 60.394 55.000 0.00 0.00 0.00 2.17
3185 4579 1.017387 GATGGTGCGTGAGGGATTTC 58.983 55.000 0.00 0.00 0.00 2.17
3186 4580 0.394352 ATGGTGCGTGAGGGATTTCC 60.394 55.000 0.00 0.00 0.00 3.13
3214 4608 2.801077 AACTACCACATTACTGGCCC 57.199 50.000 0.00 0.00 34.20 5.80
3215 4609 0.539986 ACTACCACATTACTGGCCCG 59.460 55.000 0.00 0.00 34.20 6.13
3216 4610 0.828022 CTACCACATTACTGGCCCGA 59.172 55.000 0.00 0.00 34.20 5.14
3217 4611 1.416401 CTACCACATTACTGGCCCGAT 59.584 52.381 0.00 0.00 34.20 4.18
3218 4612 0.107214 ACCACATTACTGGCCCGATG 60.107 55.000 0.00 1.51 34.20 3.84
3219 4613 0.180171 CCACATTACTGGCCCGATGA 59.820 55.000 0.00 0.00 0.00 2.92
3220 4614 1.408127 CCACATTACTGGCCCGATGAA 60.408 52.381 0.00 0.00 0.00 2.57
3221 4615 2.575532 CACATTACTGGCCCGATGAAT 58.424 47.619 0.00 0.00 0.00 2.57
3222 4616 3.495983 CCACATTACTGGCCCGATGAATA 60.496 47.826 0.00 0.00 0.00 1.75
3223 4617 4.326826 CACATTACTGGCCCGATGAATAT 58.673 43.478 0.00 0.00 0.00 1.28
3224 4618 4.154737 CACATTACTGGCCCGATGAATATG 59.845 45.833 0.00 0.00 0.00 1.78
3225 4619 4.202461 ACATTACTGGCCCGATGAATATGT 60.202 41.667 0.00 0.00 0.00 2.29
3226 4620 2.550830 ACTGGCCCGATGAATATGTC 57.449 50.000 0.00 0.00 0.00 3.06
3227 4621 1.072331 ACTGGCCCGATGAATATGTCC 59.928 52.381 0.00 0.00 0.00 4.02
3228 4622 1.072173 CTGGCCCGATGAATATGTCCA 59.928 52.381 0.00 0.00 0.00 4.02
3229 4623 1.704628 TGGCCCGATGAATATGTCCAT 59.295 47.619 0.00 0.00 0.00 3.41
3230 4624 2.108075 TGGCCCGATGAATATGTCCATT 59.892 45.455 0.00 0.00 0.00 3.16
3231 4625 2.749621 GGCCCGATGAATATGTCCATTC 59.250 50.000 0.00 0.00 35.80 2.67
3232 4626 3.411446 GCCCGATGAATATGTCCATTCA 58.589 45.455 1.36 1.36 46.15 2.57
3233 4627 3.438087 GCCCGATGAATATGTCCATTCAG 59.562 47.826 4.97 0.00 45.51 3.02
3234 4628 4.005650 CCCGATGAATATGTCCATTCAGG 58.994 47.826 4.97 2.15 45.51 3.86
3235 4629 3.438087 CCGATGAATATGTCCATTCAGGC 59.562 47.826 4.97 0.00 45.51 4.85
3236 4630 3.124128 CGATGAATATGTCCATTCAGGCG 59.876 47.826 4.97 6.96 45.51 5.52
3237 4631 3.558931 TGAATATGTCCATTCAGGCGT 57.441 42.857 0.00 0.00 39.43 5.68
3238 4632 3.884895 TGAATATGTCCATTCAGGCGTT 58.115 40.909 0.00 0.00 39.43 4.84
3239 4633 3.876914 TGAATATGTCCATTCAGGCGTTC 59.123 43.478 0.00 0.00 39.43 3.95
3240 4634 3.845781 ATATGTCCATTCAGGCGTTCT 57.154 42.857 0.00 0.00 37.29 3.01
3241 4635 2.496899 ATGTCCATTCAGGCGTTCTT 57.503 45.000 0.00 0.00 37.29 2.52
3242 4636 1.808411 TGTCCATTCAGGCGTTCTTC 58.192 50.000 0.00 0.00 37.29 2.87
3243 4637 1.087501 GTCCATTCAGGCGTTCTTCC 58.912 55.000 0.00 0.00 37.29 3.46
3244 4638 0.035439 TCCATTCAGGCGTTCTTCCC 60.035 55.000 0.00 0.00 37.29 3.97
3245 4639 0.035056 CCATTCAGGCGTTCTTCCCT 60.035 55.000 0.00 0.00 0.00 4.20
3249 4643 3.393360 AGGCGTTCTTCCCTGAGG 58.607 61.111 0.00 0.00 0.00 3.86
3250 4644 1.229209 AGGCGTTCTTCCCTGAGGA 60.229 57.895 0.00 0.00 41.88 3.71
3251 4645 0.618968 AGGCGTTCTTCCCTGAGGAT 60.619 55.000 0.00 0.00 43.54 3.24
3252 4646 0.253327 GGCGTTCTTCCCTGAGGATT 59.747 55.000 0.00 0.00 43.54 3.01
3253 4647 1.340114 GGCGTTCTTCCCTGAGGATTT 60.340 52.381 0.00 0.00 43.54 2.17
3254 4648 2.010497 GCGTTCTTCCCTGAGGATTTC 58.990 52.381 0.00 0.00 43.54 2.17
3255 4649 2.633488 CGTTCTTCCCTGAGGATTTCC 58.367 52.381 0.00 0.00 43.54 3.13
3266 4660 2.998316 AGGATTTCCTAGTGCTCTGC 57.002 50.000 0.00 0.00 46.48 4.26
3267 4661 1.488393 AGGATTTCCTAGTGCTCTGCC 59.512 52.381 0.00 0.00 46.48 4.85
3268 4662 1.210478 GGATTTCCTAGTGCTCTGCCA 59.790 52.381 0.00 0.00 0.00 4.92
3269 4663 2.559440 GATTTCCTAGTGCTCTGCCAG 58.441 52.381 0.00 0.00 0.00 4.85
3270 4664 0.615331 TTTCCTAGTGCTCTGCCAGG 59.385 55.000 0.00 0.00 0.00 4.45
3271 4665 0.252239 TTCCTAGTGCTCTGCCAGGA 60.252 55.000 2.31 2.31 33.59 3.86
3272 4666 0.031716 TCCTAGTGCTCTGCCAGGAT 60.032 55.000 2.31 0.00 30.43 3.24
3273 4667 0.106335 CCTAGTGCTCTGCCAGGATG 59.894 60.000 0.00 0.00 0.00 3.51
3289 4683 5.762825 CAGGATGGTGTTGGAAATATGAG 57.237 43.478 0.00 0.00 0.00 2.90
3290 4684 4.037208 CAGGATGGTGTTGGAAATATGAGC 59.963 45.833 0.00 0.00 0.00 4.26
3291 4685 3.953612 GGATGGTGTTGGAAATATGAGCA 59.046 43.478 0.00 0.00 0.00 4.26
3292 4686 4.402155 GGATGGTGTTGGAAATATGAGCAA 59.598 41.667 0.00 0.00 0.00 3.91
3293 4687 5.105392 GGATGGTGTTGGAAATATGAGCAAA 60.105 40.000 0.00 0.00 0.00 3.68
3294 4688 5.999205 TGGTGTTGGAAATATGAGCAAAT 57.001 34.783 0.00 0.00 0.00 2.32
3295 4689 6.357579 TGGTGTTGGAAATATGAGCAAATT 57.642 33.333 0.00 0.00 0.00 1.82
3296 4690 7.473735 TGGTGTTGGAAATATGAGCAAATTA 57.526 32.000 0.00 0.00 0.00 1.40
3297 4691 7.319646 TGGTGTTGGAAATATGAGCAAATTAC 58.680 34.615 0.00 0.00 0.00 1.89
3298 4692 7.178274 TGGTGTTGGAAATATGAGCAAATTACT 59.822 33.333 0.00 0.00 0.00 2.24
3299 4693 8.682710 GGTGTTGGAAATATGAGCAAATTACTA 58.317 33.333 0.00 0.00 0.00 1.82
3300 4694 9.503427 GTGTTGGAAATATGAGCAAATTACTAC 57.497 33.333 0.00 0.00 0.00 2.73
3301 4695 8.394877 TGTTGGAAATATGAGCAAATTACTACG 58.605 33.333 0.00 0.00 0.00 3.51
3302 4696 8.609176 GTTGGAAATATGAGCAAATTACTACGA 58.391 33.333 0.00 0.00 0.00 3.43
3303 4697 8.365399 TGGAAATATGAGCAAATTACTACGAG 57.635 34.615 0.00 0.00 0.00 4.18
3304 4698 8.201464 TGGAAATATGAGCAAATTACTACGAGA 58.799 33.333 0.00 0.00 0.00 4.04
3305 4699 9.209175 GGAAATATGAGCAAATTACTACGAGAT 57.791 33.333 0.00 0.00 0.00 2.75
3312 4706 9.817809 TGAGCAAATTACTACGAGATTTAATCT 57.182 29.630 7.23 7.23 43.70 2.40
3314 4708 9.817809 AGCAAATTACTACGAGATTTAATCTGA 57.182 29.630 12.63 0.00 40.38 3.27
3345 4739 9.926158 ATAGAAGATAAATCATGACTACAGCAG 57.074 33.333 0.00 0.00 0.00 4.24
3346 4740 6.705381 AGAAGATAAATCATGACTACAGCAGC 59.295 38.462 0.00 0.00 0.00 5.25
3347 4741 5.922053 AGATAAATCATGACTACAGCAGCA 58.078 37.500 0.00 0.00 0.00 4.41
3348 4742 5.990386 AGATAAATCATGACTACAGCAGCAG 59.010 40.000 0.00 0.00 0.00 4.24
3349 4743 3.900966 AATCATGACTACAGCAGCAGA 57.099 42.857 0.00 0.00 0.00 4.26
3350 4744 2.955477 TCATGACTACAGCAGCAGAG 57.045 50.000 0.00 0.00 0.00 3.35
3351 4745 2.450476 TCATGACTACAGCAGCAGAGA 58.550 47.619 0.00 0.00 0.00 3.10
3352 4746 3.029570 TCATGACTACAGCAGCAGAGAT 58.970 45.455 0.00 0.00 0.00 2.75
3353 4747 3.450096 TCATGACTACAGCAGCAGAGATT 59.550 43.478 0.00 0.00 0.00 2.40
3354 4748 4.646492 TCATGACTACAGCAGCAGAGATTA 59.354 41.667 0.00 0.00 0.00 1.75
3355 4749 5.127682 TCATGACTACAGCAGCAGAGATTAA 59.872 40.000 0.00 0.00 0.00 1.40
3356 4750 5.405935 TGACTACAGCAGCAGAGATTAAA 57.594 39.130 0.00 0.00 0.00 1.52
3357 4751 5.171476 TGACTACAGCAGCAGAGATTAAAC 58.829 41.667 0.00 0.00 0.00 2.01
3358 4752 5.047021 TGACTACAGCAGCAGAGATTAAACT 60.047 40.000 0.00 0.00 0.00 2.66
3359 4753 6.152831 TGACTACAGCAGCAGAGATTAAACTA 59.847 38.462 0.00 0.00 0.00 2.24
3360 4754 6.936279 ACTACAGCAGCAGAGATTAAACTAA 58.064 36.000 0.00 0.00 0.00 2.24
3361 4755 7.560368 ACTACAGCAGCAGAGATTAAACTAAT 58.440 34.615 0.00 0.00 0.00 1.73
3362 4756 6.917217 ACAGCAGCAGAGATTAAACTAATC 57.083 37.500 0.00 0.00 43.77 1.75
3363 4757 6.409704 ACAGCAGCAGAGATTAAACTAATCA 58.590 36.000 8.66 0.00 45.41 2.57
3364 4758 7.052873 ACAGCAGCAGAGATTAAACTAATCAT 58.947 34.615 8.66 0.00 45.41 2.45
3365 4759 7.012138 ACAGCAGCAGAGATTAAACTAATCATG 59.988 37.037 8.66 7.75 45.41 3.07
3366 4760 7.012138 CAGCAGCAGAGATTAAACTAATCATGT 59.988 37.037 8.66 0.00 45.41 3.21
3367 4761 7.012138 AGCAGCAGAGATTAAACTAATCATGTG 59.988 37.037 8.66 4.58 45.41 3.21
3368 4762 7.011763 GCAGCAGAGATTAAACTAATCATGTGA 59.988 37.037 8.66 0.00 45.41 3.58
3369 4763 8.886719 CAGCAGAGATTAAACTAATCATGTGAA 58.113 33.333 8.66 0.00 45.41 3.18
3370 4764 9.624373 AGCAGAGATTAAACTAATCATGTGAAT 57.376 29.630 8.66 0.00 45.41 2.57
3378 4772 7.821595 AAACTAATCATGTGAATTGCATGTG 57.178 32.000 15.20 9.36 42.94 3.21
3379 4773 6.762702 ACTAATCATGTGAATTGCATGTGA 57.237 33.333 15.20 7.86 42.94 3.58
3380 4774 7.160547 ACTAATCATGTGAATTGCATGTGAA 57.839 32.000 15.20 2.44 42.94 3.18
3381 4775 7.031372 ACTAATCATGTGAATTGCATGTGAAC 58.969 34.615 15.20 0.00 42.94 3.18
3382 4776 5.654603 ATCATGTGAATTGCATGTGAACT 57.345 34.783 15.20 0.00 42.94 3.01
3383 4777 6.762702 ATCATGTGAATTGCATGTGAACTA 57.237 33.333 15.20 1.38 42.94 2.24
3384 4778 6.185852 TCATGTGAATTGCATGTGAACTAG 57.814 37.500 15.20 0.00 42.94 2.57
3385 4779 4.424061 TGTGAATTGCATGTGAACTAGC 57.576 40.909 0.00 0.00 0.00 3.42
3386 4780 3.819902 TGTGAATTGCATGTGAACTAGCA 59.180 39.130 0.00 0.00 34.79 3.49
3387 4781 4.460034 TGTGAATTGCATGTGAACTAGCAT 59.540 37.500 0.00 0.00 36.80 3.79
3388 4782 5.647225 TGTGAATTGCATGTGAACTAGCATA 59.353 36.000 0.00 0.00 36.80 3.14
3389 4783 6.183360 TGTGAATTGCATGTGAACTAGCATAG 60.183 38.462 0.00 0.00 46.50 2.23
3390 4784 4.825546 ATTGCATGTGAACTAGCATAGC 57.174 40.909 0.00 0.00 44.39 2.97
3391 4785 3.264998 TGCATGTGAACTAGCATAGCA 57.735 42.857 0.00 0.00 44.39 3.49
3392 4786 3.200483 TGCATGTGAACTAGCATAGCAG 58.800 45.455 0.00 0.00 44.39 4.24
3393 4787 3.118665 TGCATGTGAACTAGCATAGCAGA 60.119 43.478 0.00 0.00 44.39 4.26
3394 4788 4.063689 GCATGTGAACTAGCATAGCAGAT 58.936 43.478 0.00 0.00 44.39 2.90
3395 4789 4.083961 GCATGTGAACTAGCATAGCAGATG 60.084 45.833 0.00 0.00 44.39 2.90
3396 4790 5.295152 CATGTGAACTAGCATAGCAGATGA 58.705 41.667 2.96 0.00 44.39 2.92
3397 4791 5.343307 TGTGAACTAGCATAGCAGATGAA 57.657 39.130 2.96 0.00 44.39 2.57
3398 4792 5.111989 TGTGAACTAGCATAGCAGATGAAC 58.888 41.667 2.96 0.00 44.39 3.18
3399 4793 5.111989 GTGAACTAGCATAGCAGATGAACA 58.888 41.667 2.96 0.00 44.39 3.18
3400 4794 5.233902 GTGAACTAGCATAGCAGATGAACAG 59.766 44.000 2.96 0.00 44.39 3.16
3401 4795 5.127682 TGAACTAGCATAGCAGATGAACAGA 59.872 40.000 2.96 0.00 44.39 3.41
3402 4796 4.942852 ACTAGCATAGCAGATGAACAGAC 58.057 43.478 2.96 0.00 44.39 3.51
3403 4797 3.191078 AGCATAGCAGATGAACAGACC 57.809 47.619 2.96 0.00 0.00 3.85
3404 4798 2.502947 AGCATAGCAGATGAACAGACCA 59.497 45.455 2.96 0.00 0.00 4.02
3405 4799 2.611292 GCATAGCAGATGAACAGACCAC 59.389 50.000 2.96 0.00 0.00 4.16
3406 4800 3.865446 CATAGCAGATGAACAGACCACA 58.135 45.455 0.00 0.00 0.00 4.17
3407 4801 4.449131 CATAGCAGATGAACAGACCACAT 58.551 43.478 0.00 0.00 0.00 3.21
3408 4802 2.983229 AGCAGATGAACAGACCACATC 58.017 47.619 0.00 0.00 40.14 3.06
3410 4804 3.771479 AGCAGATGAACAGACCACATCTA 59.229 43.478 0.00 0.00 45.61 1.98
3411 4805 4.118410 GCAGATGAACAGACCACATCTAG 58.882 47.826 0.00 0.00 45.61 2.43
3412 4806 4.691175 CAGATGAACAGACCACATCTAGG 58.309 47.826 0.00 0.00 45.61 3.02
3413 4807 3.708631 AGATGAACAGACCACATCTAGGG 59.291 47.826 0.00 0.00 45.55 3.53
3414 4808 1.555075 TGAACAGACCACATCTAGGGC 59.445 52.381 0.00 0.00 35.15 5.19
3415 4809 1.555075 GAACAGACCACATCTAGGGCA 59.445 52.381 0.00 0.00 36.27 5.36
3416 4810 0.905357 ACAGACCACATCTAGGGCAC 59.095 55.000 0.00 0.00 36.27 5.01
3417 4811 0.904649 CAGACCACATCTAGGGCACA 59.095 55.000 0.00 0.00 36.27 4.57
3418 4812 1.487976 CAGACCACATCTAGGGCACAT 59.512 52.381 0.00 0.00 36.27 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
252 268 9.487790 TTCAAAAACATTTCAGAGTTCTGTTTT 57.512 25.926 8.85 6.02 46.37 2.43
255 271 8.306761 AGTTTCAAAAACATTTCAGAGTTCTGT 58.693 29.630 8.85 0.00 44.12 3.41
259 275 9.087424 GCTTAGTTTCAAAAACATTTCAGAGTT 57.913 29.630 5.46 0.00 0.00 3.01
347 375 6.857777 TTTTGTGGTAAATTTTGAGCATGG 57.142 33.333 0.00 0.00 0.00 3.66
395 433 9.643693 CCTGATGAGCAGTAAAATTGTAAAAAT 57.356 29.630 0.00 0.00 43.33 1.82
399 437 7.362056 GCTTCCTGATGAGCAGTAAAATTGTAA 60.362 37.037 0.00 0.00 43.33 2.41
400 438 6.094048 GCTTCCTGATGAGCAGTAAAATTGTA 59.906 38.462 0.00 0.00 43.33 2.41
401 439 5.105997 GCTTCCTGATGAGCAGTAAAATTGT 60.106 40.000 0.00 0.00 43.33 2.71
413 451 3.280295 AGCTCAAATGCTTCCTGATGAG 58.720 45.455 0.00 0.00 40.93 2.90
558 597 9.480861 TCCAAATTTGTGACATTTACCCATATA 57.519 29.630 16.73 0.00 0.00 0.86
567 885 8.458573 TGTACTACTCCAAATTTGTGACATTT 57.541 30.769 16.73 0.00 0.00 2.32
601 919 1.202463 CGCATGGGGTGTTCAAAACAA 60.202 47.619 0.89 0.00 44.16 2.83
692 1020 1.002868 CCCTCACTCTGCCTTGGTG 60.003 63.158 0.00 0.00 0.00 4.17
693 1021 0.768221 TTCCCTCACTCTGCCTTGGT 60.768 55.000 0.00 0.00 0.00 3.67
694 1022 0.622665 ATTCCCTCACTCTGCCTTGG 59.377 55.000 0.00 0.00 0.00 3.61
695 1023 2.744494 GCTATTCCCTCACTCTGCCTTG 60.744 54.545 0.00 0.00 0.00 3.61
696 1024 1.488393 GCTATTCCCTCACTCTGCCTT 59.512 52.381 0.00 0.00 0.00 4.35
697 1025 1.127343 GCTATTCCCTCACTCTGCCT 58.873 55.000 0.00 0.00 0.00 4.75
698 1026 0.249657 CGCTATTCCCTCACTCTGCC 60.250 60.000 0.00 0.00 0.00 4.85
699 1027 0.878086 GCGCTATTCCCTCACTCTGC 60.878 60.000 0.00 0.00 0.00 4.26
700 1028 0.596083 CGCGCTATTCCCTCACTCTG 60.596 60.000 5.56 0.00 0.00 3.35
701 1029 0.752009 TCGCGCTATTCCCTCACTCT 60.752 55.000 5.56 0.00 0.00 3.24
702 1030 0.102481 TTCGCGCTATTCCCTCACTC 59.898 55.000 5.56 0.00 0.00 3.51
703 1031 0.753262 ATTCGCGCTATTCCCTCACT 59.247 50.000 5.56 0.00 0.00 3.41
704 1032 1.527311 GAATTCGCGCTATTCCCTCAC 59.473 52.381 17.66 0.00 0.00 3.51
705 1033 1.865865 GAATTCGCGCTATTCCCTCA 58.134 50.000 17.66 0.00 0.00 3.86
784 1127 2.028190 CCGTATGGGCGAGCAGAG 59.972 66.667 0.00 0.00 0.00 3.35
806 1149 3.131478 AGTTAATGGCGCGGTGGC 61.131 61.111 8.83 8.32 45.12 5.01
807 1150 2.791256 CAGTTAATGGCGCGGTGG 59.209 61.111 8.83 0.00 0.00 4.61
808 1151 2.100216 GCAGTTAATGGCGCGGTG 59.900 61.111 8.83 0.00 0.00 4.94
929 1280 1.904032 GGTCCCTCTCCTCTGCTTG 59.096 63.158 0.00 0.00 0.00 4.01
930 1281 1.684049 CGGTCCCTCTCCTCTGCTT 60.684 63.158 0.00 0.00 0.00 3.91
931 1282 2.043450 CGGTCCCTCTCCTCTGCT 60.043 66.667 0.00 0.00 0.00 4.24
932 1283 3.151022 CCGGTCCCTCTCCTCTGC 61.151 72.222 0.00 0.00 0.00 4.26
996 1369 0.103026 CCGCCATCTTCGACATCTCA 59.897 55.000 0.00 0.00 0.00 3.27
1238 1611 0.537188 GGAGTCAAGATGCGAGGGAA 59.463 55.000 0.00 0.00 0.00 3.97
1258 1631 1.632018 TAATGAACTCCAGGGGCGGG 61.632 60.000 0.00 0.00 0.00 6.13
1262 1635 2.629336 GAGCTAATGAACTCCAGGGG 57.371 55.000 0.00 0.00 0.00 4.79
1283 1656 2.823154 CACGGCAAAGAGGGGAAATTAA 59.177 45.455 0.00 0.00 0.00 1.40
1331 1704 5.096443 ACCTTTGATTTTGTGCCAAAAGA 57.904 34.783 15.24 5.52 30.56 2.52
1332 1705 5.236263 GGTACCTTTGATTTTGTGCCAAAAG 59.764 40.000 4.06 6.46 34.14 2.27
1348 1722 3.818295 TGGCATAAACCAGGTACCTTT 57.182 42.857 13.15 7.16 33.75 3.11
1503 1877 9.403110 GCTGCAAAATATTGTTCTAATCATAGG 57.597 33.333 0.00 0.00 38.85 2.57
1541 1925 6.080406 GCGCTACATAAAAAGGCTCATAATC 58.920 40.000 0.00 0.00 0.00 1.75
1594 1978 2.273370 ACACGCATGGAGTAGTAACG 57.727 50.000 0.00 0.00 0.00 3.18
1613 1997 7.498900 CCAAACTGCATACTCATGGATTTAGTA 59.501 37.037 0.00 0.00 31.41 1.82
1614 1998 6.319658 CCAAACTGCATACTCATGGATTTAGT 59.680 38.462 0.00 0.00 31.41 2.24
1615 1999 6.543465 TCCAAACTGCATACTCATGGATTTAG 59.457 38.462 0.00 0.00 31.41 1.85
1616 2000 6.422333 TCCAAACTGCATACTCATGGATTTA 58.578 36.000 0.00 0.00 31.41 1.40
1617 2001 5.263599 TCCAAACTGCATACTCATGGATTT 58.736 37.500 0.00 0.00 31.41 2.17
1618 2002 4.858850 TCCAAACTGCATACTCATGGATT 58.141 39.130 0.00 0.00 31.41 3.01
1619 2003 4.164796 TCTCCAAACTGCATACTCATGGAT 59.835 41.667 0.00 0.00 35.15 3.41
1620 2004 3.519107 TCTCCAAACTGCATACTCATGGA 59.481 43.478 0.00 0.00 34.52 3.41
1621 2005 3.875727 CTCTCCAAACTGCATACTCATGG 59.124 47.826 0.00 0.00 32.36 3.66
1622 2006 3.311871 GCTCTCCAAACTGCATACTCATG 59.688 47.826 0.00 0.00 35.07 3.07
1623 2007 3.054875 TGCTCTCCAAACTGCATACTCAT 60.055 43.478 0.00 0.00 0.00 2.90
1624 2008 2.302733 TGCTCTCCAAACTGCATACTCA 59.697 45.455 0.00 0.00 0.00 3.41
1625 2009 2.935201 CTGCTCTCCAAACTGCATACTC 59.065 50.000 0.00 0.00 34.79 2.59
1626 2010 2.568956 TCTGCTCTCCAAACTGCATACT 59.431 45.455 0.00 0.00 34.79 2.12
1627 2011 2.935201 CTCTGCTCTCCAAACTGCATAC 59.065 50.000 0.00 0.00 34.79 2.39
1628 2012 2.093288 CCTCTGCTCTCCAAACTGCATA 60.093 50.000 0.00 0.00 34.79 3.14
1629 2013 1.339824 CCTCTGCTCTCCAAACTGCAT 60.340 52.381 0.00 0.00 34.79 3.96
1630 2014 0.035881 CCTCTGCTCTCCAAACTGCA 59.964 55.000 0.00 0.00 0.00 4.41
1631 2015 0.322975 TCCTCTGCTCTCCAAACTGC 59.677 55.000 0.00 0.00 0.00 4.40
1632 2016 4.686191 ATATCCTCTGCTCTCCAAACTG 57.314 45.455 0.00 0.00 0.00 3.16
1633 2017 7.898100 TGATATATATCCTCTGCTCTCCAAACT 59.102 37.037 18.12 0.00 31.71 2.66
1634 2018 8.072321 TGATATATATCCTCTGCTCTCCAAAC 57.928 38.462 18.12 0.00 31.71 2.93
1635 2019 7.898100 ACTGATATATATCCTCTGCTCTCCAAA 59.102 37.037 18.12 0.00 31.71 3.28
1636 2020 7.417554 ACTGATATATATCCTCTGCTCTCCAA 58.582 38.462 18.12 0.00 31.71 3.53
1637 2021 6.979418 ACTGATATATATCCTCTGCTCTCCA 58.021 40.000 18.12 0.00 31.71 3.86
1638 2022 7.665559 CCTACTGATATATATCCTCTGCTCTCC 59.334 44.444 18.12 0.00 31.71 3.71
1639 2023 8.217799 ACCTACTGATATATATCCTCTGCTCTC 58.782 40.741 18.12 0.00 31.71 3.20
1640 2024 8.113114 ACCTACTGATATATATCCTCTGCTCT 57.887 38.462 18.12 0.00 31.71 4.09
1641 2025 8.760980 AACCTACTGATATATATCCTCTGCTC 57.239 38.462 18.12 0.00 31.71 4.26
1642 2026 9.554053 AAAACCTACTGATATATATCCTCTGCT 57.446 33.333 18.12 0.00 31.71 4.24
1681 2065 9.533253 CTGGAACAAATCAAAAGTCTTACAAAT 57.467 29.630 0.00 0.00 38.70 2.32
1682 2066 7.491048 GCTGGAACAAATCAAAAGTCTTACAAA 59.509 33.333 0.00 0.00 38.70 2.83
1683 2067 6.978080 GCTGGAACAAATCAAAAGTCTTACAA 59.022 34.615 0.00 0.00 38.70 2.41
1684 2068 6.321181 AGCTGGAACAAATCAAAAGTCTTACA 59.679 34.615 0.00 0.00 38.70 2.41
1685 2069 6.739112 AGCTGGAACAAATCAAAAGTCTTAC 58.261 36.000 0.00 0.00 38.70 2.34
1686 2070 6.959639 AGCTGGAACAAATCAAAAGTCTTA 57.040 33.333 0.00 0.00 38.70 2.10
1687 2071 5.859205 AGCTGGAACAAATCAAAAGTCTT 57.141 34.783 0.00 0.00 38.70 3.01
1688 2072 6.547510 AGTTAGCTGGAACAAATCAAAAGTCT 59.452 34.615 0.00 0.00 38.70 3.24
1689 2073 6.739112 AGTTAGCTGGAACAAATCAAAAGTC 58.261 36.000 0.00 0.00 38.70 3.01
1690 2074 6.715347 AGTTAGCTGGAACAAATCAAAAGT 57.285 33.333 0.00 0.00 38.70 2.66
1691 2075 9.696917 AATTAGTTAGCTGGAACAAATCAAAAG 57.303 29.630 0.00 0.00 38.70 2.27
1692 2076 9.691362 GAATTAGTTAGCTGGAACAAATCAAAA 57.309 29.630 0.00 0.00 38.70 2.44
1693 2077 8.303876 GGAATTAGTTAGCTGGAACAAATCAAA 58.696 33.333 0.00 0.00 38.70 2.69
1694 2078 7.450014 TGGAATTAGTTAGCTGGAACAAATCAA 59.550 33.333 0.00 0.00 38.70 2.57
1695 2079 6.945435 TGGAATTAGTTAGCTGGAACAAATCA 59.055 34.615 0.00 0.00 38.70 2.57
1696 2080 7.391148 TGGAATTAGTTAGCTGGAACAAATC 57.609 36.000 0.00 0.00 38.70 2.17
1697 2081 7.631377 GCATGGAATTAGTTAGCTGGAACAAAT 60.631 37.037 0.00 0.00 38.70 2.32
1698 2082 6.350110 GCATGGAATTAGTTAGCTGGAACAAA 60.350 38.462 0.00 0.00 38.70 2.83
1699 2083 5.125417 GCATGGAATTAGTTAGCTGGAACAA 59.875 40.000 0.00 0.00 38.70 2.83
1700 2084 4.640201 GCATGGAATTAGTTAGCTGGAACA 59.360 41.667 0.00 0.00 0.00 3.18
1701 2085 4.260784 CGCATGGAATTAGTTAGCTGGAAC 60.261 45.833 0.00 0.00 0.00 3.62
1702 2086 3.876914 CGCATGGAATTAGTTAGCTGGAA 59.123 43.478 0.00 0.00 0.00 3.53
1703 2087 3.118408 ACGCATGGAATTAGTTAGCTGGA 60.118 43.478 0.00 0.00 0.00 3.86
1704 2088 3.002656 CACGCATGGAATTAGTTAGCTGG 59.997 47.826 0.00 0.00 0.00 4.85
1705 2089 3.623060 ACACGCATGGAATTAGTTAGCTG 59.377 43.478 0.00 0.00 0.00 4.24
1706 2090 3.873910 ACACGCATGGAATTAGTTAGCT 58.126 40.909 0.00 0.00 0.00 3.32
1707 2091 4.569162 TGTACACGCATGGAATTAGTTAGC 59.431 41.667 0.00 0.00 0.00 3.09
1708 2092 6.656314 TTGTACACGCATGGAATTAGTTAG 57.344 37.500 0.00 0.00 0.00 2.34
1709 2093 7.436430 TTTTGTACACGCATGGAATTAGTTA 57.564 32.000 0.00 0.00 0.00 2.24
1710 2094 5.950758 TTTGTACACGCATGGAATTAGTT 57.049 34.783 0.00 0.00 0.00 2.24
1711 2095 5.950758 TTTTGTACACGCATGGAATTAGT 57.049 34.783 0.00 0.00 0.00 2.24
1712 2096 5.971202 GGATTTTGTACACGCATGGAATTAG 59.029 40.000 0.00 0.00 0.00 1.73
1713 2097 5.416013 TGGATTTTGTACACGCATGGAATTA 59.584 36.000 0.00 0.00 0.00 1.40
1714 2098 4.219507 TGGATTTTGTACACGCATGGAATT 59.780 37.500 0.00 0.00 0.00 2.17
1715 2099 3.761218 TGGATTTTGTACACGCATGGAAT 59.239 39.130 0.00 0.00 0.00 3.01
1716 2100 3.149981 TGGATTTTGTACACGCATGGAA 58.850 40.909 0.00 0.00 0.00 3.53
1717 2101 2.784347 TGGATTTTGTACACGCATGGA 58.216 42.857 0.00 0.00 0.00 3.41
1718 2102 3.128415 TCATGGATTTTGTACACGCATGG 59.872 43.478 0.00 0.00 0.00 3.66
1719 2103 4.142622 ACTCATGGATTTTGTACACGCATG 60.143 41.667 0.00 1.39 0.00 4.06
1720 2104 4.009675 ACTCATGGATTTTGTACACGCAT 58.990 39.130 0.00 0.00 0.00 4.73
1721 2105 3.407698 ACTCATGGATTTTGTACACGCA 58.592 40.909 0.00 0.00 0.00 5.24
1722 2106 5.734855 ATACTCATGGATTTTGTACACGC 57.265 39.130 0.00 0.00 0.00 5.34
1723 2107 7.491372 ACTGTATACTCATGGATTTTGTACACG 59.509 37.037 4.17 0.00 0.00 4.49
1724 2108 8.718102 ACTGTATACTCATGGATTTTGTACAC 57.282 34.615 4.17 0.00 0.00 2.90
1725 2109 9.733556 AAACTGTATACTCATGGATTTTGTACA 57.266 29.630 4.17 0.00 0.00 2.90
1726 2110 9.988350 CAAACTGTATACTCATGGATTTTGTAC 57.012 33.333 4.17 0.00 0.00 2.90
1815 2203 3.629142 AAGCGGTTAGTTAGCTGGAAT 57.371 42.857 0.00 0.00 41.53 3.01
1841 2229 0.908198 GATGACTCCTCCAGCAGGTT 59.092 55.000 0.00 0.00 43.95 3.50
1887 3093 6.718454 TCCAACTAGGAGTATCTTATTACGGG 59.282 42.308 0.00 0.00 43.07 5.28
1902 3108 6.722590 TGTATAAACACTCACTCCAACTAGGA 59.277 38.462 0.00 0.00 46.75 2.94
1903 3109 6.931838 TGTATAAACACTCACTCCAACTAGG 58.068 40.000 0.00 0.00 39.47 3.02
1904 3110 6.531948 GCTGTATAAACACTCACTCCAACTAG 59.468 42.308 0.00 0.00 0.00 2.57
1978 3184 9.747898 AATCAATACCAATACTGACAGGTAAAA 57.252 29.630 7.51 0.00 39.80 1.52
2017 3229 1.259770 GGTGGTCGAAGTCGTTTGAAC 59.740 52.381 0.00 0.00 40.80 3.18
2018 3230 1.134759 TGGTGGTCGAAGTCGTTTGAA 60.135 47.619 0.00 0.00 40.80 2.69
2019 3231 0.460722 TGGTGGTCGAAGTCGTTTGA 59.539 50.000 0.00 0.00 40.80 2.69
2020 3232 0.859232 CTGGTGGTCGAAGTCGTTTG 59.141 55.000 0.00 0.00 40.80 2.93
2021 3233 0.748450 TCTGGTGGTCGAAGTCGTTT 59.252 50.000 0.00 0.00 40.80 3.60
2068 3280 3.349006 CCCGTCACTGTGCTGTGC 61.349 66.667 2.12 0.00 37.81 4.57
2069 3281 0.813610 TTTCCCGTCACTGTGCTGTG 60.814 55.000 2.12 3.29 39.15 3.66
2070 3282 0.814010 GTTTCCCGTCACTGTGCTGT 60.814 55.000 2.12 0.00 0.00 4.40
2071 3283 0.813610 TGTTTCCCGTCACTGTGCTG 60.814 55.000 2.12 0.00 0.00 4.41
2072 3284 0.532862 CTGTTTCCCGTCACTGTGCT 60.533 55.000 2.12 0.00 0.00 4.40
2098 3310 7.101652 TGCGGGTTAATTAGCATGAATAAAA 57.898 32.000 0.00 0.00 34.39 1.52
2124 3336 0.250424 CCTGCATCCATCCACGCATA 60.250 55.000 0.00 0.00 33.15 3.14
2307 3519 1.044611 GGGAGAGGAGGATGTAGCAC 58.955 60.000 0.00 0.00 0.00 4.40
2530 3742 6.096001 AGCTTGAAATTAACTATGAGCCCTTG 59.904 38.462 0.00 0.00 0.00 3.61
2667 3879 1.002087 CCTGCAACGGAACTAGGTTCT 59.998 52.381 9.74 0.00 41.70 3.01
2778 3990 5.789710 ATACGTATTTGTGAACGGAAAGG 57.210 39.130 1.14 0.00 43.25 3.11
2821 4209 6.262601 AGTGAACAAACACACGGATAAAAAG 58.737 36.000 0.00 0.00 42.45 2.27
2876 4270 6.434028 CCCTCCTTTGACAAATAAGATGTTCA 59.566 38.462 0.05 0.00 0.00 3.18
2920 4314 7.829378 AAGATTTTATACACTCAGTTCCGTC 57.171 36.000 0.00 0.00 0.00 4.79
2932 4326 7.014711 TGCAGGTTCCACAAAAGATTTTATACA 59.985 33.333 0.00 0.00 0.00 2.29
3013 4407 5.154222 GTCTGTAATGTGGTAGCTTTTTGC 58.846 41.667 0.00 0.00 43.29 3.68
3014 4408 5.382303 CGTCTGTAATGTGGTAGCTTTTTG 58.618 41.667 0.00 0.00 0.00 2.44
3015 4409 4.454504 CCGTCTGTAATGTGGTAGCTTTTT 59.545 41.667 0.00 0.00 0.00 1.94
3016 4410 4.000988 CCGTCTGTAATGTGGTAGCTTTT 58.999 43.478 0.00 0.00 0.00 2.27
3017 4411 3.259876 TCCGTCTGTAATGTGGTAGCTTT 59.740 43.478 0.00 0.00 0.00 3.51
3018 4412 2.829720 TCCGTCTGTAATGTGGTAGCTT 59.170 45.455 0.00 0.00 0.00 3.74
3019 4413 2.453521 TCCGTCTGTAATGTGGTAGCT 58.546 47.619 0.00 0.00 0.00 3.32
3020 4414 2.953466 TCCGTCTGTAATGTGGTAGC 57.047 50.000 0.00 0.00 0.00 3.58
3021 4415 6.085555 ACATATCCGTCTGTAATGTGGTAG 57.914 41.667 0.00 0.00 29.93 3.18
3022 4416 5.010314 GGACATATCCGTCTGTAATGTGGTA 59.990 44.000 0.00 0.00 34.48 3.25
3023 4417 4.202223 GGACATATCCGTCTGTAATGTGGT 60.202 45.833 0.00 0.00 34.48 4.16
3024 4418 4.307432 GGACATATCCGTCTGTAATGTGG 58.693 47.826 0.00 0.00 34.48 4.17
3033 4427 8.915601 ATCCTCAGGAATGGACATATCCGTCT 62.916 46.154 0.00 0.00 44.10 4.18
3034 4428 6.798341 ATCCTCAGGAATGGACATATCCGTC 61.798 48.000 0.00 0.00 44.10 4.79
3036 4430 3.517100 ATCCTCAGGAATGGACATATCCG 59.483 47.826 0.00 0.00 41.10 4.18
3037 4431 5.511386 AATCCTCAGGAATGGACATATCC 57.489 43.478 0.00 0.00 39.54 2.59
3038 4432 5.942826 GGAAATCCTCAGGAATGGACATATC 59.057 44.000 0.00 0.00 34.34 1.63
3039 4433 5.614402 AGGAAATCCTCAGGAATGGACATAT 59.386 40.000 0.00 0.00 44.77 1.78
3040 4434 4.977739 AGGAAATCCTCAGGAATGGACATA 59.022 41.667 0.00 0.00 44.77 2.29
3041 4435 3.790408 AGGAAATCCTCAGGAATGGACAT 59.210 43.478 0.00 0.00 44.77 3.06
3042 4436 3.192944 AGGAAATCCTCAGGAATGGACA 58.807 45.455 0.00 0.00 44.77 4.02
3043 4437 3.941704 AGGAAATCCTCAGGAATGGAC 57.058 47.619 0.00 0.00 44.77 4.02
3044 4438 3.392616 GCTAGGAAATCCTCAGGAATGGA 59.607 47.826 4.96 0.00 44.77 3.41
3045 4439 3.137176 TGCTAGGAAATCCTCAGGAATGG 59.863 47.826 4.96 0.00 44.77 3.16
3046 4440 4.428294 TGCTAGGAAATCCTCAGGAATG 57.572 45.455 4.96 0.00 44.77 2.67
3047 4441 5.456921 TTTGCTAGGAAATCCTCAGGAAT 57.543 39.130 4.96 0.00 44.77 3.01
3048 4442 4.927267 TTTGCTAGGAAATCCTCAGGAA 57.073 40.909 4.96 6.95 44.77 3.36
3049 4443 4.927267 TTTTGCTAGGAAATCCTCAGGA 57.073 40.909 10.45 0.00 44.77 3.86
3068 4462 3.830178 GGGCCTGTAATGTGGTAGTTTTT 59.170 43.478 0.84 0.00 0.00 1.94
3069 4463 3.427573 GGGCCTGTAATGTGGTAGTTTT 58.572 45.455 0.84 0.00 0.00 2.43
3070 4464 2.617021 CGGGCCTGTAATGTGGTAGTTT 60.617 50.000 2.29 0.00 0.00 2.66
3071 4465 1.065709 CGGGCCTGTAATGTGGTAGTT 60.066 52.381 2.29 0.00 0.00 2.24
3072 4466 0.539986 CGGGCCTGTAATGTGGTAGT 59.460 55.000 2.29 0.00 0.00 2.73
3073 4467 0.179056 CCGGGCCTGTAATGTGGTAG 60.179 60.000 11.58 0.00 0.00 3.18
3074 4468 1.909228 CCGGGCCTGTAATGTGGTA 59.091 57.895 11.58 0.00 0.00 3.25
3075 4469 2.674754 CCGGGCCTGTAATGTGGT 59.325 61.111 11.58 0.00 0.00 4.16
3076 4470 2.828549 GCCGGGCCTGTAATGTGG 60.829 66.667 11.58 0.00 0.00 4.17
3077 4471 3.202001 CGCCGGGCCTGTAATGTG 61.202 66.667 14.55 0.00 0.00 3.21
3078 4472 2.265467 ATTCGCCGGGCCTGTAATGT 62.265 55.000 14.55 0.00 0.00 2.71
3079 4473 0.250124 TATTCGCCGGGCCTGTAATG 60.250 55.000 14.55 0.00 0.00 1.90
3080 4474 0.690762 ATATTCGCCGGGCCTGTAAT 59.309 50.000 14.55 9.74 0.00 1.89
3081 4475 0.250124 CATATTCGCCGGGCCTGTAA 60.250 55.000 14.55 2.08 0.00 2.41
3082 4476 1.369692 CATATTCGCCGGGCCTGTA 59.630 57.895 14.55 3.90 0.00 2.74
3083 4477 2.111043 CATATTCGCCGGGCCTGT 59.889 61.111 14.55 1.46 0.00 4.00
3084 4478 1.961277 GACATATTCGCCGGGCCTG 60.961 63.158 14.55 3.88 0.00 4.85
3085 4479 2.426023 GACATATTCGCCGGGCCT 59.574 61.111 14.55 0.69 0.00 5.19
3086 4480 2.668550 GGACATATTCGCCGGGCC 60.669 66.667 14.55 0.00 0.00 5.80
3087 4481 0.889186 AATGGACATATTCGCCGGGC 60.889 55.000 9.54 9.54 0.00 6.13
3088 4482 1.156736 GAATGGACATATTCGCCGGG 58.843 55.000 2.18 0.00 0.00 5.73
3089 4483 1.800586 CTGAATGGACATATTCGCCGG 59.199 52.381 0.00 0.00 39.39 6.13
3090 4484 1.800586 CCTGAATGGACATATTCGCCG 59.199 52.381 0.00 0.00 39.39 6.46
3091 4485 1.537202 GCCTGAATGGACATATTCGCC 59.463 52.381 0.00 0.00 39.39 5.54
3092 4486 1.195448 CGCCTGAATGGACATATTCGC 59.805 52.381 0.00 0.00 39.39 4.70
3093 4487 2.483876 ACGCCTGAATGGACATATTCG 58.516 47.619 0.00 0.00 39.39 3.34
3094 4488 4.130118 AGAACGCCTGAATGGACATATTC 58.870 43.478 0.00 0.00 38.35 1.75
3095 4489 4.156455 AGAACGCCTGAATGGACATATT 57.844 40.909 0.00 0.00 38.35 1.28
3096 4490 3.845781 AGAACGCCTGAATGGACATAT 57.154 42.857 0.00 0.00 38.35 1.78
3097 4491 3.531538 GAAGAACGCCTGAATGGACATA 58.468 45.455 0.00 0.00 38.35 2.29
3098 4492 2.359900 GAAGAACGCCTGAATGGACAT 58.640 47.619 0.00 0.00 38.35 3.06
3099 4493 1.610624 GGAAGAACGCCTGAATGGACA 60.611 52.381 0.00 0.00 38.35 4.02
3100 4494 1.087501 GGAAGAACGCCTGAATGGAC 58.912 55.000 0.00 0.00 38.35 4.02
3101 4495 0.035439 GGGAAGAACGCCTGAATGGA 60.035 55.000 0.00 0.00 38.35 3.41
3102 4496 0.035056 AGGGAAGAACGCCTGAATGG 60.035 55.000 0.00 0.00 39.35 3.16
3103 4497 1.089920 CAGGGAAGAACGCCTGAATG 58.910 55.000 0.00 0.00 38.40 2.67
3104 4498 0.984230 TCAGGGAAGAACGCCTGAAT 59.016 50.000 0.00 0.00 40.40 2.57
3105 4499 0.321671 CTCAGGGAAGAACGCCTGAA 59.678 55.000 8.31 0.00 41.65 3.02
3106 4500 1.544825 CCTCAGGGAAGAACGCCTGA 61.545 60.000 0.00 0.00 40.76 3.86
3107 4501 1.078848 CCTCAGGGAAGAACGCCTG 60.079 63.158 0.00 0.00 37.89 4.85
3108 4502 0.618968 ATCCTCAGGGAAGAACGCCT 60.619 55.000 0.00 0.00 45.78 5.52
3109 4503 0.253327 AATCCTCAGGGAAGAACGCC 59.747 55.000 0.00 0.00 45.78 5.68
3110 4504 2.010497 GAAATCCTCAGGGAAGAACGC 58.990 52.381 0.00 0.00 45.78 4.84
3111 4505 2.237392 AGGAAATCCTCAGGGAAGAACG 59.763 50.000 0.00 0.00 44.77 3.95
3112 4506 4.471747 ACTAGGAAATCCTCAGGGAAGAAC 59.528 45.833 4.96 0.00 44.77 3.01
3113 4507 4.471386 CACTAGGAAATCCTCAGGGAAGAA 59.529 45.833 4.96 0.00 44.77 2.52
3114 4508 4.033709 CACTAGGAAATCCTCAGGGAAGA 58.966 47.826 4.96 0.00 44.77 2.87
3115 4509 3.432890 GCACTAGGAAATCCTCAGGGAAG 60.433 52.174 4.96 0.00 44.77 3.46
3116 4510 2.505819 GCACTAGGAAATCCTCAGGGAA 59.494 50.000 4.96 0.00 44.77 3.97
3117 4511 2.119495 GCACTAGGAAATCCTCAGGGA 58.881 52.381 4.96 0.00 44.77 4.20
3118 4512 2.103941 GAGCACTAGGAAATCCTCAGGG 59.896 54.545 4.96 4.78 44.77 4.45
3119 4513 3.037549 AGAGCACTAGGAAATCCTCAGG 58.962 50.000 4.96 0.80 44.77 3.86
3120 4514 3.740764 GCAGAGCACTAGGAAATCCTCAG 60.741 52.174 4.96 5.05 44.77 3.35
3121 4515 2.169352 GCAGAGCACTAGGAAATCCTCA 59.831 50.000 4.96 0.00 44.77 3.86
3122 4516 2.484594 GGCAGAGCACTAGGAAATCCTC 60.485 54.545 4.96 0.00 44.77 3.71
3124 4518 1.808133 CGGCAGAGCACTAGGAAATCC 60.808 57.143 0.00 0.00 0.00 3.01
3125 4519 1.576356 CGGCAGAGCACTAGGAAATC 58.424 55.000 0.00 0.00 0.00 2.17
3126 4520 0.179000 CCGGCAGAGCACTAGGAAAT 59.821 55.000 0.00 0.00 0.00 2.17
3127 4521 1.596934 CCGGCAGAGCACTAGGAAA 59.403 57.895 0.00 0.00 0.00 3.13
3128 4522 2.359169 CCCGGCAGAGCACTAGGAA 61.359 63.158 0.00 0.00 0.00 3.36
3129 4523 2.589610 ATCCCGGCAGAGCACTAGGA 62.590 60.000 0.00 0.00 0.00 2.94
3130 4524 2.136878 ATCCCGGCAGAGCACTAGG 61.137 63.158 0.00 0.00 0.00 3.02
3131 4525 1.068753 CATCCCGGCAGAGCACTAG 59.931 63.158 0.00 0.00 0.00 2.57
3132 4526 2.434843 CCATCCCGGCAGAGCACTA 61.435 63.158 0.00 0.00 0.00 2.74
3133 4527 3.790437 CCATCCCGGCAGAGCACT 61.790 66.667 0.00 0.00 0.00 4.40
3134 4528 4.101448 ACCATCCCGGCAGAGCAC 62.101 66.667 0.00 0.00 39.03 4.40
3135 4529 4.100084 CACCATCCCGGCAGAGCA 62.100 66.667 0.00 0.00 39.03 4.26
3159 4553 3.630148 CACGCACCATCCGATCGC 61.630 66.667 10.32 0.00 0.00 4.58
3160 4554 1.946156 CTCACGCACCATCCGATCG 60.946 63.158 8.51 8.51 0.00 3.69
3161 4555 1.592669 CCTCACGCACCATCCGATC 60.593 63.158 0.00 0.00 0.00 3.69
3162 4556 2.501128 CCTCACGCACCATCCGAT 59.499 61.111 0.00 0.00 0.00 4.18
3163 4557 3.770040 CCCTCACGCACCATCCGA 61.770 66.667 0.00 0.00 0.00 4.55
3164 4558 2.593468 AATCCCTCACGCACCATCCG 62.593 60.000 0.00 0.00 0.00 4.18
3165 4559 0.394352 AAATCCCTCACGCACCATCC 60.394 55.000 0.00 0.00 0.00 3.51
3166 4560 1.017387 GAAATCCCTCACGCACCATC 58.983 55.000 0.00 0.00 0.00 3.51
3167 4561 0.394352 GGAAATCCCTCACGCACCAT 60.394 55.000 0.00 0.00 0.00 3.55
3168 4562 1.002624 GGAAATCCCTCACGCACCA 60.003 57.895 0.00 0.00 0.00 4.17
3169 4563 0.539986 TAGGAAATCCCTCACGCACC 59.460 55.000 0.00 0.00 43.31 5.01
3170 4564 1.941325 CTAGGAAATCCCTCACGCAC 58.059 55.000 0.00 0.00 43.31 5.34
3171 4565 0.178068 GCTAGGAAATCCCTCACGCA 59.822 55.000 0.00 0.00 43.31 5.24
3172 4566 0.178068 TGCTAGGAAATCCCTCACGC 59.822 55.000 0.00 0.00 43.31 5.34
3173 4567 2.691409 TTGCTAGGAAATCCCTCACG 57.309 50.000 0.00 0.00 43.31 4.35
3192 4586 3.830178 GGGCCAGTAATGTGGTAGTTTTT 59.170 43.478 4.39 0.00 40.09 1.94
3193 4587 3.427573 GGGCCAGTAATGTGGTAGTTTT 58.572 45.455 4.39 0.00 40.09 2.43
3194 4588 2.617021 CGGGCCAGTAATGTGGTAGTTT 60.617 50.000 4.39 0.00 40.09 2.66
3195 4589 1.065709 CGGGCCAGTAATGTGGTAGTT 60.066 52.381 4.39 0.00 40.09 2.24
3196 4590 0.539986 CGGGCCAGTAATGTGGTAGT 59.460 55.000 4.39 0.00 40.09 2.73
3197 4591 0.828022 TCGGGCCAGTAATGTGGTAG 59.172 55.000 4.39 0.00 40.09 3.18
3198 4592 1.140052 CATCGGGCCAGTAATGTGGTA 59.860 52.381 4.39 0.00 40.09 3.25
3199 4593 0.107214 CATCGGGCCAGTAATGTGGT 60.107 55.000 4.39 0.00 40.09 4.16
3200 4594 0.180171 TCATCGGGCCAGTAATGTGG 59.820 55.000 4.39 0.00 41.01 4.17
3201 4595 2.036958 TTCATCGGGCCAGTAATGTG 57.963 50.000 4.39 0.00 0.00 3.21
3202 4596 4.202461 ACATATTCATCGGGCCAGTAATGT 60.202 41.667 4.39 3.68 0.00 2.71
3203 4597 4.326826 ACATATTCATCGGGCCAGTAATG 58.673 43.478 4.39 1.04 0.00 1.90
3204 4598 4.565652 GGACATATTCATCGGGCCAGTAAT 60.566 45.833 4.39 5.65 0.00 1.89
3205 4599 3.244422 GGACATATTCATCGGGCCAGTAA 60.244 47.826 4.39 0.00 0.00 2.24
3206 4600 2.301870 GGACATATTCATCGGGCCAGTA 59.698 50.000 4.39 0.00 0.00 2.74
3207 4601 1.072331 GGACATATTCATCGGGCCAGT 59.928 52.381 4.39 0.00 0.00 4.00
3208 4602 1.072173 TGGACATATTCATCGGGCCAG 59.928 52.381 4.39 0.00 0.00 4.85
3209 4603 1.135960 TGGACATATTCATCGGGCCA 58.864 50.000 4.39 0.00 0.00 5.36
3210 4604 2.496899 ATGGACATATTCATCGGGCC 57.503 50.000 0.00 0.00 0.00 5.80
3211 4605 3.411446 TGAATGGACATATTCATCGGGC 58.589 45.455 0.00 0.00 40.95 6.13
3212 4606 4.005650 CCTGAATGGACATATTCATCGGG 58.994 47.826 0.00 0.00 43.80 5.14
3213 4607 3.438087 GCCTGAATGGACATATTCATCGG 59.562 47.826 0.00 0.00 43.80 4.18
3214 4608 3.124128 CGCCTGAATGGACATATTCATCG 59.876 47.826 0.00 0.00 43.80 3.84
3215 4609 4.067896 ACGCCTGAATGGACATATTCATC 58.932 43.478 0.00 0.00 43.80 2.92
3216 4610 4.090761 ACGCCTGAATGGACATATTCAT 57.909 40.909 0.00 0.00 43.80 2.57
3217 4611 3.558931 ACGCCTGAATGGACATATTCA 57.441 42.857 0.00 0.00 42.93 2.57
3218 4612 4.130118 AGAACGCCTGAATGGACATATTC 58.870 43.478 0.00 0.00 38.35 1.75
3219 4613 4.156455 AGAACGCCTGAATGGACATATT 57.844 40.909 0.00 0.00 38.35 1.28
3220 4614 3.845781 AGAACGCCTGAATGGACATAT 57.154 42.857 0.00 0.00 38.35 1.78
3221 4615 3.531538 GAAGAACGCCTGAATGGACATA 58.468 45.455 0.00 0.00 38.35 2.29
3222 4616 2.359900 GAAGAACGCCTGAATGGACAT 58.640 47.619 0.00 0.00 38.35 3.06
3223 4617 1.610624 GGAAGAACGCCTGAATGGACA 60.611 52.381 0.00 0.00 38.35 4.02
3224 4618 1.087501 GGAAGAACGCCTGAATGGAC 58.912 55.000 0.00 0.00 38.35 4.02
3225 4619 0.035439 GGGAAGAACGCCTGAATGGA 60.035 55.000 0.00 0.00 38.35 3.41
3226 4620 0.035056 AGGGAAGAACGCCTGAATGG 60.035 55.000 0.00 0.00 39.35 3.16
3227 4621 1.089920 CAGGGAAGAACGCCTGAATG 58.910 55.000 0.00 0.00 38.40 2.67
3228 4622 0.984230 TCAGGGAAGAACGCCTGAAT 59.016 50.000 0.00 0.00 40.40 2.57
3229 4623 0.321671 CTCAGGGAAGAACGCCTGAA 59.678 55.000 8.31 0.00 41.65 3.02
3230 4624 1.544825 CCTCAGGGAAGAACGCCTGA 61.545 60.000 0.00 0.00 40.76 3.86
3231 4625 1.078848 CCTCAGGGAAGAACGCCTG 60.079 63.158 0.00 0.00 37.89 4.85
3232 4626 0.618968 ATCCTCAGGGAAGAACGCCT 60.619 55.000 0.00 0.00 45.78 5.52
3233 4627 0.253327 AATCCTCAGGGAAGAACGCC 59.747 55.000 0.00 0.00 45.78 5.68
3234 4628 2.010497 GAAATCCTCAGGGAAGAACGC 58.990 52.381 0.00 0.00 45.78 4.84
3235 4629 2.237392 AGGAAATCCTCAGGGAAGAACG 59.763 50.000 0.00 0.00 44.77 3.95
3236 4630 4.471747 ACTAGGAAATCCTCAGGGAAGAAC 59.528 45.833 4.96 0.00 44.77 3.01
3237 4631 4.471386 CACTAGGAAATCCTCAGGGAAGAA 59.529 45.833 4.96 0.00 44.77 2.52
3238 4632 4.033709 CACTAGGAAATCCTCAGGGAAGA 58.966 47.826 4.96 0.00 44.77 2.87
3239 4633 3.432890 GCACTAGGAAATCCTCAGGGAAG 60.433 52.174 4.96 0.00 44.77 3.46
3240 4634 2.505819 GCACTAGGAAATCCTCAGGGAA 59.494 50.000 4.96 0.00 44.77 3.97
3241 4635 2.119495 GCACTAGGAAATCCTCAGGGA 58.881 52.381 4.96 0.00 44.77 4.20
3242 4636 2.103941 GAGCACTAGGAAATCCTCAGGG 59.896 54.545 4.96 4.78 44.77 4.45
3243 4637 3.037549 AGAGCACTAGGAAATCCTCAGG 58.962 50.000 4.96 0.80 44.77 3.86
3244 4638 3.740764 GCAGAGCACTAGGAAATCCTCAG 60.741 52.174 4.96 5.05 44.77 3.35
3245 4639 2.169352 GCAGAGCACTAGGAAATCCTCA 59.831 50.000 4.96 0.00 44.77 3.86
3246 4640 2.484594 GGCAGAGCACTAGGAAATCCTC 60.485 54.545 4.96 0.00 44.77 3.71
3248 4642 1.210478 TGGCAGAGCACTAGGAAATCC 59.790 52.381 0.00 0.00 0.00 3.01
3249 4643 2.559440 CTGGCAGAGCACTAGGAAATC 58.441 52.381 9.42 0.00 0.00 2.17
3250 4644 1.211457 CCTGGCAGAGCACTAGGAAAT 59.789 52.381 17.94 0.00 30.85 2.17
3251 4645 0.615331 CCTGGCAGAGCACTAGGAAA 59.385 55.000 17.94 0.00 30.85 3.13
3252 4646 0.252239 TCCTGGCAGAGCACTAGGAA 60.252 55.000 17.94 0.00 33.91 3.36
3253 4647 0.031716 ATCCTGGCAGAGCACTAGGA 60.032 55.000 17.94 2.76 38.39 2.94
3254 4648 0.106335 CATCCTGGCAGAGCACTAGG 59.894 60.000 17.94 0.00 0.00 3.02
3255 4649 0.106335 CCATCCTGGCAGAGCACTAG 59.894 60.000 17.94 0.00 0.00 2.57
3256 4650 0.618680 ACCATCCTGGCAGAGCACTA 60.619 55.000 17.94 0.00 42.67 2.74
3257 4651 1.922369 ACCATCCTGGCAGAGCACT 60.922 57.895 17.94 0.00 42.67 4.40
3258 4652 1.748122 CACCATCCTGGCAGAGCAC 60.748 63.158 17.94 0.00 42.67 4.40
3259 4653 1.782201 AACACCATCCTGGCAGAGCA 61.782 55.000 17.94 0.00 42.67 4.26
3260 4654 1.001641 AACACCATCCTGGCAGAGC 60.002 57.895 17.94 0.00 42.67 4.09
3261 4655 0.679002 CCAACACCATCCTGGCAGAG 60.679 60.000 17.94 6.35 42.67 3.35
3262 4656 1.133181 TCCAACACCATCCTGGCAGA 61.133 55.000 17.94 2.24 42.67 4.26
3263 4657 0.251297 TTCCAACACCATCCTGGCAG 60.251 55.000 7.75 7.75 42.67 4.85
3264 4658 0.187117 TTTCCAACACCATCCTGGCA 59.813 50.000 0.00 0.00 42.67 4.92
3265 4659 1.560505 ATTTCCAACACCATCCTGGC 58.439 50.000 0.00 0.00 42.67 4.85
3266 4660 4.535781 TCATATTTCCAACACCATCCTGG 58.464 43.478 0.00 0.00 45.02 4.45
3267 4661 4.037208 GCTCATATTTCCAACACCATCCTG 59.963 45.833 0.00 0.00 0.00 3.86
3268 4662 4.210331 GCTCATATTTCCAACACCATCCT 58.790 43.478 0.00 0.00 0.00 3.24
3269 4663 3.953612 TGCTCATATTTCCAACACCATCC 59.046 43.478 0.00 0.00 0.00 3.51
3270 4664 5.581126 TTGCTCATATTTCCAACACCATC 57.419 39.130 0.00 0.00 0.00 3.51
3271 4665 5.999205 TTTGCTCATATTTCCAACACCAT 57.001 34.783 0.00 0.00 0.00 3.55
3272 4666 5.999205 ATTTGCTCATATTTCCAACACCA 57.001 34.783 0.00 0.00 0.00 4.17
3273 4667 7.547227 AGTAATTTGCTCATATTTCCAACACC 58.453 34.615 0.00 0.00 0.00 4.16
3274 4668 9.503427 GTAGTAATTTGCTCATATTTCCAACAC 57.497 33.333 0.00 0.00 0.00 3.32
3275 4669 8.394877 CGTAGTAATTTGCTCATATTTCCAACA 58.605 33.333 0.00 0.00 0.00 3.33
3276 4670 8.609176 TCGTAGTAATTTGCTCATATTTCCAAC 58.391 33.333 0.00 0.00 0.00 3.77
3277 4671 8.725405 TCGTAGTAATTTGCTCATATTTCCAA 57.275 30.769 0.00 0.00 0.00 3.53
3278 4672 8.201464 TCTCGTAGTAATTTGCTCATATTTCCA 58.799 33.333 0.00 0.00 0.00 3.53
3279 4673 8.589335 TCTCGTAGTAATTTGCTCATATTTCC 57.411 34.615 0.00 0.00 0.00 3.13
3286 4680 9.817809 AGATTAAATCTCGTAGTAATTTGCTCA 57.182 29.630 0.00 0.00 33.42 4.26
3288 4682 9.817809 TCAGATTAAATCTCGTAGTAATTTGCT 57.182 29.630 0.00 0.00 37.58 3.91
3319 4713 9.926158 CTGCTGTAGTCATGATTTATCTTCTAT 57.074 33.333 0.00 0.00 0.00 1.98
3320 4714 7.869937 GCTGCTGTAGTCATGATTTATCTTCTA 59.130 37.037 0.00 0.00 0.00 2.10
3321 4715 6.705381 GCTGCTGTAGTCATGATTTATCTTCT 59.295 38.462 0.00 0.00 0.00 2.85
3322 4716 6.481313 TGCTGCTGTAGTCATGATTTATCTTC 59.519 38.462 0.00 0.00 0.00 2.87
3323 4717 6.351711 TGCTGCTGTAGTCATGATTTATCTT 58.648 36.000 0.00 0.00 0.00 2.40
3324 4718 5.922053 TGCTGCTGTAGTCATGATTTATCT 58.078 37.500 0.00 0.00 0.00 1.98
3325 4719 5.987953 TCTGCTGCTGTAGTCATGATTTATC 59.012 40.000 0.00 0.00 0.00 1.75
3326 4720 5.922053 TCTGCTGCTGTAGTCATGATTTAT 58.078 37.500 0.00 0.00 0.00 1.40
3327 4721 5.127682 TCTCTGCTGCTGTAGTCATGATTTA 59.872 40.000 0.00 0.00 0.00 1.40
3328 4722 4.081254 TCTCTGCTGCTGTAGTCATGATTT 60.081 41.667 0.00 0.00 0.00 2.17
3329 4723 3.450096 TCTCTGCTGCTGTAGTCATGATT 59.550 43.478 0.00 0.00 0.00 2.57
3330 4724 3.029570 TCTCTGCTGCTGTAGTCATGAT 58.970 45.455 0.00 0.00 0.00 2.45
3331 4725 2.450476 TCTCTGCTGCTGTAGTCATGA 58.550 47.619 8.46 0.00 0.00 3.07
3332 4726 2.955477 TCTCTGCTGCTGTAGTCATG 57.045 50.000 8.46 0.00 0.00 3.07
3333 4727 5.604758 TTAATCTCTGCTGCTGTAGTCAT 57.395 39.130 8.46 0.08 0.00 3.06
3334 4728 5.047021 AGTTTAATCTCTGCTGCTGTAGTCA 60.047 40.000 8.46 0.00 0.00 3.41
3335 4729 5.415221 AGTTTAATCTCTGCTGCTGTAGTC 58.585 41.667 8.46 0.00 0.00 2.59
3336 4730 5.413309 AGTTTAATCTCTGCTGCTGTAGT 57.587 39.130 8.46 0.00 0.00 2.73
3337 4731 7.708322 TGATTAGTTTAATCTCTGCTGCTGTAG 59.292 37.037 0.00 2.17 43.79 2.74
3338 4732 7.555965 TGATTAGTTTAATCTCTGCTGCTGTA 58.444 34.615 0.00 0.00 43.79 2.74
3339 4733 6.409704 TGATTAGTTTAATCTCTGCTGCTGT 58.590 36.000 0.00 0.00 43.79 4.40
3340 4734 6.915544 TGATTAGTTTAATCTCTGCTGCTG 57.084 37.500 0.00 0.00 43.79 4.41
3341 4735 7.012138 CACATGATTAGTTTAATCTCTGCTGCT 59.988 37.037 0.00 0.00 43.79 4.24
3342 4736 7.011763 TCACATGATTAGTTTAATCTCTGCTGC 59.988 37.037 0.00 0.00 43.79 5.25
3343 4737 8.429493 TCACATGATTAGTTTAATCTCTGCTG 57.571 34.615 0.00 0.00 43.79 4.41
3344 4738 9.624373 ATTCACATGATTAGTTTAATCTCTGCT 57.376 29.630 0.00 0.00 43.79 4.24
3352 4746 9.356433 CACATGCAATTCACATGATTAGTTTAA 57.644 29.630 19.87 0.00 46.33 1.52
3353 4747 8.738106 TCACATGCAATTCACATGATTAGTTTA 58.262 29.630 19.87 0.20 46.33 2.01
3354 4748 7.604549 TCACATGCAATTCACATGATTAGTTT 58.395 30.769 19.87 0.00 46.33 2.66
3355 4749 7.160547 TCACATGCAATTCACATGATTAGTT 57.839 32.000 19.87 0.00 46.33 2.24
3356 4750 6.762702 TCACATGCAATTCACATGATTAGT 57.237 33.333 19.87 0.38 46.33 2.24
3357 4751 7.255569 AGTTCACATGCAATTCACATGATTAG 58.744 34.615 19.87 9.80 46.33 1.73
3358 4752 7.160547 AGTTCACATGCAATTCACATGATTA 57.839 32.000 19.87 6.38 46.33 1.75
3359 4753 6.032956 AGTTCACATGCAATTCACATGATT 57.967 33.333 19.87 1.54 46.33 2.57
3360 4754 5.654603 AGTTCACATGCAATTCACATGAT 57.345 34.783 19.87 6.26 46.33 2.45
3361 4755 5.392272 GCTAGTTCACATGCAATTCACATGA 60.392 40.000 19.87 6.81 46.33 3.07
3363 4757 4.460034 TGCTAGTTCACATGCAATTCACAT 59.540 37.500 0.00 0.00 32.12 3.21
3364 4758 3.819902 TGCTAGTTCACATGCAATTCACA 59.180 39.130 0.00 0.00 32.12 3.58
3365 4759 4.424061 TGCTAGTTCACATGCAATTCAC 57.576 40.909 0.00 0.00 32.12 3.18
3366 4760 5.220912 GCTATGCTAGTTCACATGCAATTCA 60.221 40.000 0.00 0.00 38.96 2.57
3367 4761 5.210715 GCTATGCTAGTTCACATGCAATTC 58.789 41.667 0.00 0.00 38.96 2.17
3368 4762 4.641541 TGCTATGCTAGTTCACATGCAATT 59.358 37.500 0.00 0.00 38.96 2.32
3369 4763 4.201657 TGCTATGCTAGTTCACATGCAAT 58.798 39.130 0.00 0.00 38.96 3.56
3370 4764 3.608796 TGCTATGCTAGTTCACATGCAA 58.391 40.909 0.00 0.00 38.96 4.08
3371 4765 3.118665 TCTGCTATGCTAGTTCACATGCA 60.119 43.478 0.00 0.00 39.83 3.96
3372 4766 3.461061 TCTGCTATGCTAGTTCACATGC 58.539 45.455 0.00 0.00 0.00 4.06
3373 4767 5.295152 TCATCTGCTATGCTAGTTCACATG 58.705 41.667 0.00 0.00 0.00 3.21
3374 4768 5.541953 TCATCTGCTATGCTAGTTCACAT 57.458 39.130 0.00 0.00 0.00 3.21
3375 4769 5.111989 GTTCATCTGCTATGCTAGTTCACA 58.888 41.667 0.00 0.00 0.00 3.58
3376 4770 5.111989 TGTTCATCTGCTATGCTAGTTCAC 58.888 41.667 0.00 0.00 0.00 3.18
3377 4771 5.127682 TCTGTTCATCTGCTATGCTAGTTCA 59.872 40.000 0.00 0.00 0.00 3.18
3378 4772 5.461737 GTCTGTTCATCTGCTATGCTAGTTC 59.538 44.000 0.00 0.00 0.00 3.01
3379 4773 5.355596 GTCTGTTCATCTGCTATGCTAGTT 58.644 41.667 0.00 0.00 0.00 2.24
3380 4774 4.202202 GGTCTGTTCATCTGCTATGCTAGT 60.202 45.833 0.00 0.00 0.00 2.57
3381 4775 4.202192 TGGTCTGTTCATCTGCTATGCTAG 60.202 45.833 0.00 0.00 0.00 3.42
3382 4776 3.706086 TGGTCTGTTCATCTGCTATGCTA 59.294 43.478 0.00 0.00 0.00 3.49
3383 4777 2.502947 TGGTCTGTTCATCTGCTATGCT 59.497 45.455 0.00 0.00 0.00 3.79
3384 4778 2.611292 GTGGTCTGTTCATCTGCTATGC 59.389 50.000 0.00 0.00 0.00 3.14
3385 4779 3.865446 TGTGGTCTGTTCATCTGCTATG 58.135 45.455 0.00 0.00 0.00 2.23
3386 4780 4.408270 AGATGTGGTCTGTTCATCTGCTAT 59.592 41.667 6.17 0.00 44.08 2.97
3387 4781 3.771479 AGATGTGGTCTGTTCATCTGCTA 59.229 43.478 6.17 0.00 44.08 3.49
3388 4782 2.570752 AGATGTGGTCTGTTCATCTGCT 59.429 45.455 6.17 0.00 44.08 4.24
3389 4783 2.983229 AGATGTGGTCTGTTCATCTGC 58.017 47.619 6.17 0.00 44.08 4.26
3390 4784 4.442612 CCCTAGATGTGGTCTGTTCATCTG 60.443 50.000 14.51 6.88 44.95 2.90
3391 4785 3.708631 CCCTAGATGTGGTCTGTTCATCT 59.291 47.826 10.84 10.84 46.33 2.90
3392 4786 3.742640 GCCCTAGATGTGGTCTGTTCATC 60.743 52.174 0.00 0.00 37.83 2.92
3393 4787 2.171448 GCCCTAGATGTGGTCTGTTCAT 59.829 50.000 0.00 0.00 37.83 2.57
3394 4788 1.555075 GCCCTAGATGTGGTCTGTTCA 59.445 52.381 0.00 0.00 37.83 3.18
3395 4789 1.555075 TGCCCTAGATGTGGTCTGTTC 59.445 52.381 0.00 0.00 37.83 3.18
3396 4790 1.279271 GTGCCCTAGATGTGGTCTGTT 59.721 52.381 0.00 0.00 37.83 3.16
3397 4791 0.905357 GTGCCCTAGATGTGGTCTGT 59.095 55.000 0.00 0.00 37.83 3.41
3398 4792 0.904649 TGTGCCCTAGATGTGGTCTG 59.095 55.000 0.00 0.00 37.83 3.51
3399 4793 1.885049 ATGTGCCCTAGATGTGGTCT 58.115 50.000 0.00 0.00 41.11 3.85



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.