Multiple sequence alignment - TraesCS2D01G267200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G267200 chr2D 100.000 3826 0 0 1 3826 326399288 326403113 0.000000e+00 7066.0
1 TraesCS2D01G267200 chr2B 94.731 2771 87 23 437 3172 396174825 396177571 0.000000e+00 4253.0
2 TraesCS2D01G267200 chr2B 97.073 205 6 0 3383 3587 396186805 396187009 2.830000e-91 346.0
3 TraesCS2D01G267200 chr2B 89.401 217 12 4 3174 3387 396179126 396179334 2.930000e-66 263.0
4 TraesCS2D01G267200 chr2A 93.228 2599 85 33 455 2994 390889821 390887255 0.000000e+00 3740.0
5 TraesCS2D01G267200 chr2A 88.364 275 26 4 3317 3587 390886567 390886295 3.690000e-85 326.0
6 TraesCS2D01G267200 chr1D 94.966 437 21 1 1 436 203321787 203321351 0.000000e+00 684.0
7 TraesCS2D01G267200 chr1D 87.872 437 49 4 1 435 469581339 469581773 9.480000e-141 510.0
8 TraesCS2D01G267200 chr1D 78.279 244 41 11 2460 2697 381020313 381020550 3.080000e-31 147.0
9 TraesCS2D01G267200 chr1A 89.189 444 42 5 1 442 313267782 313267343 2.010000e-152 549.0
10 TraesCS2D01G267200 chr1A 84.247 438 61 8 1 435 271618404 271618836 1.640000e-113 420.0
11 TraesCS2D01G267200 chr1A 83.217 429 65 6 11 437 20856713 20856290 1.670000e-103 387.0
12 TraesCS2D01G267200 chr1A 91.286 241 21 0 3586 3826 592535898 592535658 2.850000e-86 329.0
13 TraesCS2D01G267200 chr1A 87.967 241 29 0 3586 3826 250494219 250493979 6.260000e-73 285.0
14 TraesCS2D01G267200 chr1A 77.869 244 42 10 2460 2697 481675249 481675486 1.430000e-29 141.0
15 TraesCS2D01G267200 chrUn 86.927 436 54 3 1 435 246225 245792 1.600000e-133 486.0
16 TraesCS2D01G267200 chr3A 84.375 448 56 9 1 436 108289907 108290352 9.820000e-116 427.0
17 TraesCS2D01G267200 chr3A 87.179 273 31 4 168 438 108135012 108135282 1.340000e-79 307.0
18 TraesCS2D01G267200 chr3B 82.883 444 72 4 1 443 354371346 354370906 2.770000e-106 396.0
19 TraesCS2D01G267200 chr6D 93.333 240 13 3 3584 3822 472139054 472139291 6.080000e-93 351.0
20 TraesCS2D01G267200 chr7A 90.612 245 22 1 3583 3826 218936450 218936206 1.330000e-84 324.0
21 TraesCS2D01G267200 chr7A 89.024 246 27 0 3581 3826 79196481 79196726 4.800000e-79 305.0
22 TraesCS2D01G267200 chr3D 89.212 241 26 0 3586 3826 91831887 91831647 6.210000e-78 302.0
23 TraesCS2D01G267200 chr7D 89.451 237 24 1 3590 3826 564083077 564082842 8.040000e-77 298.0
24 TraesCS2D01G267200 chr4D 88.843 242 27 0 3585 3826 426205721 426205962 8.040000e-77 298.0
25 TraesCS2D01G267200 chr4D 73.913 299 70 8 2478 2772 334116906 334116612 3.120000e-21 113.0
26 TraesCS2D01G267200 chr6A 87.705 244 30 0 3583 3826 129764946 129765189 6.260000e-73 285.0
27 TraesCS2D01G267200 chr1B 77.869 244 42 11 2460 2697 510810096 510810333 1.430000e-29 141.0
28 TraesCS2D01G267200 chr5D 72.910 299 73 8 2478 2772 28880542 28880248 3.150000e-16 97.1
29 TraesCS2D01G267200 chr4B 88.136 59 7 0 2265 2323 412106503 412106445 1.910000e-08 71.3
30 TraesCS2D01G267200 chr5A 87.097 62 7 1 2262 2323 19540811 19540751 6.860000e-08 69.4
31 TraesCS2D01G267200 chr5B 100.000 31 0 0 2269 2299 21383651 21383621 1.480000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G267200 chr2D 326399288 326403113 3825 False 7066 7066 100.000 1 3826 1 chr2D.!!$F1 3825
1 TraesCS2D01G267200 chr2B 396174825 396179334 4509 False 2258 4253 92.066 437 3387 2 chr2B.!!$F2 2950
2 TraesCS2D01G267200 chr2A 390886295 390889821 3526 True 2033 3740 90.796 455 3587 2 chr2A.!!$R1 3132

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.029834 GCATGCATAGTCGCCCTTTG 59.970 55.000 14.21 0.0 0.0 2.77 F
962 1003 0.034059 ACGACCTTCCTTCTGCACTG 59.966 55.000 0.00 0.0 0.0 3.66 F
1595 1654 1.004200 CGAACCGCACTACCCCTTT 60.004 57.895 0.00 0.0 0.0 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2101 0.465705 TACTCATACCAGCTGCTGCC 59.534 55.0 23.86 0.0 40.80 4.85 R
2114 2173 0.242825 CGGTCAGTCTGCCGTAGAAA 59.757 55.0 20.80 0.0 42.73 2.52 R
3478 5200 0.545309 TGTGCTCTGCTCCTACCCTT 60.545 55.0 0.00 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.051081 AGCAGGTGATCTCTTGTGTTC 57.949 47.619 8.46 0.00 0.00 3.18
21 22 1.728971 GCAGGTGATCTCTTGTGTTCG 59.271 52.381 8.46 0.00 0.00 3.95
22 23 1.728971 CAGGTGATCTCTTGTGTTCGC 59.271 52.381 0.00 0.00 0.00 4.70
23 24 1.344438 AGGTGATCTCTTGTGTTCGCA 59.656 47.619 0.00 0.00 0.00 5.10
24 25 1.728971 GGTGATCTCTTGTGTTCGCAG 59.271 52.381 0.00 0.00 0.00 5.18
25 26 1.127582 GTGATCTCTTGTGTTCGCAGC 59.872 52.381 0.00 0.00 0.00 5.25
26 27 1.270252 TGATCTCTTGTGTTCGCAGCA 60.270 47.619 0.00 0.00 0.00 4.41
27 28 1.392853 GATCTCTTGTGTTCGCAGCAG 59.607 52.381 0.00 0.00 0.00 4.24
28 29 0.104855 TCTCTTGTGTTCGCAGCAGT 59.895 50.000 0.00 0.00 0.00 4.40
29 30 0.510359 CTCTTGTGTTCGCAGCAGTC 59.490 55.000 0.00 0.00 0.00 3.51
30 31 1.202568 CTTGTGTTCGCAGCAGTCG 59.797 57.895 0.00 0.00 0.00 4.18
31 32 2.754805 CTTGTGTTCGCAGCAGTCGC 62.755 60.000 0.00 0.00 38.99 5.19
61 62 4.085876 GCACCAAGTGGCATGTCT 57.914 55.556 0.00 0.00 39.32 3.41
62 63 2.344535 GCACCAAGTGGCATGTCTT 58.655 52.632 0.00 0.00 39.32 3.01
63 64 0.242017 GCACCAAGTGGCATGTCTTC 59.758 55.000 0.00 0.00 39.32 2.87
64 65 1.901591 CACCAAGTGGCATGTCTTCT 58.098 50.000 0.00 0.00 39.32 2.85
65 66 2.233271 CACCAAGTGGCATGTCTTCTT 58.767 47.619 0.00 0.56 39.32 2.52
66 67 2.227388 CACCAAGTGGCATGTCTTCTTC 59.773 50.000 0.00 0.00 39.32 2.87
67 68 2.158623 ACCAAGTGGCATGTCTTCTTCA 60.159 45.455 0.00 0.00 39.32 3.02
68 69 2.227388 CCAAGTGGCATGTCTTCTTCAC 59.773 50.000 0.00 0.00 0.00 3.18
69 70 2.880268 CAAGTGGCATGTCTTCTTCACA 59.120 45.455 0.00 0.00 0.00 3.58
70 71 2.775890 AGTGGCATGTCTTCTTCACAG 58.224 47.619 0.00 0.00 0.00 3.66
71 72 1.198637 GTGGCATGTCTTCTTCACAGC 59.801 52.381 0.00 0.00 0.00 4.40
72 73 1.202794 TGGCATGTCTTCTTCACAGCA 60.203 47.619 0.00 0.00 0.00 4.41
73 74 2.089980 GGCATGTCTTCTTCACAGCAT 58.910 47.619 0.00 0.00 0.00 3.79
74 75 2.159421 GGCATGTCTTCTTCACAGCATG 60.159 50.000 0.00 0.00 46.00 4.06
75 76 3.132629 CATGTCTTCTTCACAGCATGC 57.867 47.619 10.51 10.51 42.53 4.06
76 77 2.259266 TGTCTTCTTCACAGCATGCA 57.741 45.000 21.98 0.00 42.53 3.96
77 78 2.786777 TGTCTTCTTCACAGCATGCAT 58.213 42.857 21.98 4.26 42.53 3.96
78 79 3.941573 TGTCTTCTTCACAGCATGCATA 58.058 40.909 21.98 0.00 42.53 3.14
79 80 3.937079 TGTCTTCTTCACAGCATGCATAG 59.063 43.478 21.98 11.80 42.53 2.23
80 81 3.937706 GTCTTCTTCACAGCATGCATAGT 59.062 43.478 21.98 12.50 42.53 2.12
81 82 4.033817 GTCTTCTTCACAGCATGCATAGTC 59.966 45.833 21.98 0.00 42.53 2.59
82 83 2.543641 TCTTCACAGCATGCATAGTCG 58.456 47.619 21.98 9.96 42.53 4.18
83 84 1.004185 CTTCACAGCATGCATAGTCGC 60.004 52.381 21.98 0.00 42.53 5.19
84 85 0.811219 TCACAGCATGCATAGTCGCC 60.811 55.000 21.98 0.00 42.53 5.54
85 86 1.524621 ACAGCATGCATAGTCGCCC 60.525 57.895 21.98 0.00 42.53 6.13
86 87 1.227764 CAGCATGCATAGTCGCCCT 60.228 57.895 21.98 0.00 0.00 5.19
87 88 0.816825 CAGCATGCATAGTCGCCCTT 60.817 55.000 21.98 0.00 0.00 3.95
88 89 0.107017 AGCATGCATAGTCGCCCTTT 60.107 50.000 21.98 0.00 0.00 3.11
89 90 0.029834 GCATGCATAGTCGCCCTTTG 59.970 55.000 14.21 0.00 0.00 2.77
90 91 0.664761 CATGCATAGTCGCCCTTTGG 59.335 55.000 0.00 0.00 0.00 3.28
91 92 0.546122 ATGCATAGTCGCCCTTTGGA 59.454 50.000 0.00 0.00 0.00 3.53
92 93 0.326595 TGCATAGTCGCCCTTTGGAA 59.673 50.000 0.00 0.00 0.00 3.53
93 94 0.733150 GCATAGTCGCCCTTTGGAAC 59.267 55.000 0.00 0.00 0.00 3.62
94 95 1.006832 CATAGTCGCCCTTTGGAACG 58.993 55.000 0.00 0.00 0.00 3.95
95 96 0.743345 ATAGTCGCCCTTTGGAACGC 60.743 55.000 0.00 0.00 0.00 4.84
96 97 2.102109 TAGTCGCCCTTTGGAACGCA 62.102 55.000 0.00 0.00 0.00 5.24
97 98 2.203224 TCGCCCTTTGGAACGCAA 60.203 55.556 0.00 0.00 0.00 4.85
99 100 2.650778 GCCCTTTGGAACGCAAGG 59.349 61.111 0.00 0.00 46.39 3.61
100 101 1.901464 GCCCTTTGGAACGCAAGGA 60.901 57.895 0.00 0.00 42.22 3.36
101 102 1.460273 GCCCTTTGGAACGCAAGGAA 61.460 55.000 0.00 0.00 42.22 3.36
102 103 1.256812 CCCTTTGGAACGCAAGGAAT 58.743 50.000 0.00 0.00 42.22 3.01
103 104 1.067635 CCCTTTGGAACGCAAGGAATG 60.068 52.381 0.00 0.00 42.22 2.67
115 116 3.293311 CAAGGAATGCTCAGGTGTTTG 57.707 47.619 0.00 0.00 0.00 2.93
116 117 2.886523 CAAGGAATGCTCAGGTGTTTGA 59.113 45.455 0.00 0.00 0.00 2.69
117 118 3.446442 AGGAATGCTCAGGTGTTTGAT 57.554 42.857 0.00 0.00 0.00 2.57
118 119 3.087031 AGGAATGCTCAGGTGTTTGATG 58.913 45.455 0.00 0.00 0.00 3.07
119 120 2.165030 GGAATGCTCAGGTGTTTGATGG 59.835 50.000 0.00 0.00 0.00 3.51
120 121 1.843368 ATGCTCAGGTGTTTGATGGG 58.157 50.000 0.00 0.00 0.00 4.00
121 122 0.478072 TGCTCAGGTGTTTGATGGGT 59.522 50.000 0.00 0.00 0.00 4.51
122 123 1.168714 GCTCAGGTGTTTGATGGGTC 58.831 55.000 0.00 0.00 0.00 4.46
123 124 1.826385 CTCAGGTGTTTGATGGGTCC 58.174 55.000 0.00 0.00 0.00 4.46
124 125 1.352352 CTCAGGTGTTTGATGGGTCCT 59.648 52.381 0.00 0.00 0.00 3.85
125 126 1.780309 TCAGGTGTTTGATGGGTCCTT 59.220 47.619 0.00 0.00 0.00 3.36
126 127 2.176798 TCAGGTGTTTGATGGGTCCTTT 59.823 45.455 0.00 0.00 0.00 3.11
127 128 2.965147 CAGGTGTTTGATGGGTCCTTTT 59.035 45.455 0.00 0.00 0.00 2.27
128 129 2.965147 AGGTGTTTGATGGGTCCTTTTG 59.035 45.455 0.00 0.00 0.00 2.44
129 130 2.037121 GGTGTTTGATGGGTCCTTTTGG 59.963 50.000 0.00 0.00 42.21 3.28
142 143 2.800250 CCTTTTGGAATGAGAGGCAGT 58.200 47.619 0.00 0.00 44.07 4.40
143 144 3.160269 CCTTTTGGAATGAGAGGCAGTT 58.840 45.455 0.00 0.00 44.07 3.16
144 145 4.335416 CCTTTTGGAATGAGAGGCAGTTA 58.665 43.478 0.00 0.00 44.07 2.24
145 146 4.952335 CCTTTTGGAATGAGAGGCAGTTAT 59.048 41.667 0.00 0.00 44.07 1.89
146 147 6.122277 CCTTTTGGAATGAGAGGCAGTTATA 58.878 40.000 0.00 0.00 44.07 0.98
147 148 6.038714 CCTTTTGGAATGAGAGGCAGTTATAC 59.961 42.308 0.00 0.00 44.07 1.47
148 149 5.692115 TTGGAATGAGAGGCAGTTATACA 57.308 39.130 0.00 0.00 0.00 2.29
149 150 5.282055 TGGAATGAGAGGCAGTTATACAG 57.718 43.478 0.00 0.00 0.00 2.74
150 151 4.061596 GGAATGAGAGGCAGTTATACAGC 58.938 47.826 0.00 0.00 0.00 4.40
151 152 4.443457 GGAATGAGAGGCAGTTATACAGCA 60.443 45.833 0.00 0.00 31.72 4.41
152 153 4.760530 ATGAGAGGCAGTTATACAGCAA 57.239 40.909 0.00 0.00 31.72 3.91
153 154 4.128925 TGAGAGGCAGTTATACAGCAAG 57.871 45.455 0.00 0.00 31.72 4.01
154 155 3.118629 TGAGAGGCAGTTATACAGCAAGG 60.119 47.826 0.00 0.00 31.72 3.61
155 156 2.840651 AGAGGCAGTTATACAGCAAGGT 59.159 45.455 0.00 0.00 31.72 3.50
156 157 3.264450 AGAGGCAGTTATACAGCAAGGTT 59.736 43.478 0.00 0.00 31.72 3.50
157 158 3.347216 AGGCAGTTATACAGCAAGGTTG 58.653 45.455 0.00 0.00 31.72 3.77
167 168 4.598257 CAAGGTTGCCGATCTCGT 57.402 55.556 0.00 0.00 37.74 4.18
168 169 2.373938 CAAGGTTGCCGATCTCGTC 58.626 57.895 0.00 0.00 37.74 4.20
169 170 0.389817 CAAGGTTGCCGATCTCGTCA 60.390 55.000 0.00 0.00 37.74 4.35
170 171 0.108615 AAGGTTGCCGATCTCGTCAG 60.109 55.000 0.00 0.00 37.74 3.51
171 172 1.519455 GGTTGCCGATCTCGTCAGG 60.519 63.158 0.00 0.00 37.74 3.86
172 173 2.167861 GTTGCCGATCTCGTCAGGC 61.168 63.158 0.50 0.50 42.80 4.85
173 174 2.351244 TTGCCGATCTCGTCAGGCT 61.351 57.895 8.29 0.00 42.87 4.58
174 175 1.035385 TTGCCGATCTCGTCAGGCTA 61.035 55.000 8.29 0.00 42.87 3.93
175 176 0.823769 TGCCGATCTCGTCAGGCTAT 60.824 55.000 8.29 0.00 42.87 2.97
176 177 0.387878 GCCGATCTCGTCAGGCTATG 60.388 60.000 0.28 0.00 40.80 2.23
177 178 0.242286 CCGATCTCGTCAGGCTATGG 59.758 60.000 0.00 0.00 37.74 2.74
178 179 1.239347 CGATCTCGTCAGGCTATGGA 58.761 55.000 0.00 0.00 34.11 3.41
179 180 1.198867 CGATCTCGTCAGGCTATGGAG 59.801 57.143 0.00 0.00 34.11 3.86
180 181 4.578553 CGATCTCGTCAGGCTATGGAGC 62.579 59.091 0.00 0.00 40.33 4.70
188 189 2.735100 GCTATGGAGCCTACGCGC 60.735 66.667 5.73 0.00 43.49 6.86
189 190 3.043419 CTATGGAGCCTACGCGCT 58.957 61.111 5.73 0.00 43.42 5.92
190 191 1.863662 GCTATGGAGCCTACGCGCTA 61.864 60.000 5.73 0.00 43.49 4.26
191 192 0.596577 CTATGGAGCCTACGCGCTAA 59.403 55.000 5.73 0.00 39.87 3.09
192 193 1.000607 CTATGGAGCCTACGCGCTAAA 60.001 52.381 5.73 0.00 39.87 1.85
193 194 0.529992 ATGGAGCCTACGCGCTAAAC 60.530 55.000 5.73 0.00 39.87 2.01
194 195 1.881709 GGAGCCTACGCGCTAAACC 60.882 63.158 5.73 0.00 39.87 3.27
195 196 1.153706 GAGCCTACGCGCTAAACCA 60.154 57.895 5.73 0.00 39.87 3.67
196 197 1.419107 GAGCCTACGCGCTAAACCAC 61.419 60.000 5.73 0.00 39.87 4.16
197 198 1.738830 GCCTACGCGCTAAACCACA 60.739 57.895 5.73 0.00 0.00 4.17
198 199 1.087771 GCCTACGCGCTAAACCACAT 61.088 55.000 5.73 0.00 0.00 3.21
199 200 0.650512 CCTACGCGCTAAACCACATG 59.349 55.000 5.73 0.00 0.00 3.21
200 201 1.635844 CTACGCGCTAAACCACATGA 58.364 50.000 5.73 0.00 0.00 3.07
201 202 2.201732 CTACGCGCTAAACCACATGAT 58.798 47.619 5.73 0.00 0.00 2.45
202 203 2.303163 ACGCGCTAAACCACATGATA 57.697 45.000 5.73 0.00 0.00 2.15
203 204 2.201732 ACGCGCTAAACCACATGATAG 58.798 47.619 5.73 0.00 0.00 2.08
204 205 2.159156 ACGCGCTAAACCACATGATAGA 60.159 45.455 5.73 0.00 0.00 1.98
205 206 2.218759 CGCGCTAAACCACATGATAGAC 59.781 50.000 5.56 0.00 0.00 2.59
206 207 3.194861 GCGCTAAACCACATGATAGACA 58.805 45.455 0.00 0.00 0.00 3.41
207 208 3.809832 GCGCTAAACCACATGATAGACAT 59.190 43.478 0.00 0.00 40.17 3.06
208 209 4.988540 GCGCTAAACCACATGATAGACATA 59.011 41.667 0.00 0.00 37.46 2.29
209 210 5.465390 GCGCTAAACCACATGATAGACATAA 59.535 40.000 0.00 0.00 37.46 1.90
210 211 6.564125 GCGCTAAACCACATGATAGACATAAC 60.564 42.308 0.00 0.00 37.46 1.89
211 212 6.073765 CGCTAAACCACATGATAGACATAACC 60.074 42.308 0.00 0.00 37.46 2.85
212 213 6.992715 GCTAAACCACATGATAGACATAACCT 59.007 38.462 0.00 0.00 37.46 3.50
213 214 7.499232 GCTAAACCACATGATAGACATAACCTT 59.501 37.037 0.00 0.00 37.46 3.50
214 215 9.396022 CTAAACCACATGATAGACATAACCTTT 57.604 33.333 0.00 0.00 37.46 3.11
215 216 7.865706 AACCACATGATAGACATAACCTTTC 57.134 36.000 0.00 0.00 37.46 2.62
216 217 7.200434 ACCACATGATAGACATAACCTTTCT 57.800 36.000 0.00 0.00 37.46 2.52
217 218 7.275920 ACCACATGATAGACATAACCTTTCTC 58.724 38.462 0.00 0.00 37.46 2.87
218 219 7.126421 ACCACATGATAGACATAACCTTTCTCT 59.874 37.037 0.00 0.00 37.46 3.10
219 220 7.655328 CCACATGATAGACATAACCTTTCTCTC 59.345 40.741 0.00 0.00 37.46 3.20
220 221 8.420222 CACATGATAGACATAACCTTTCTCTCT 58.580 37.037 0.00 0.00 37.46 3.10
221 222 8.420222 ACATGATAGACATAACCTTTCTCTCTG 58.580 37.037 0.00 0.00 37.46 3.35
222 223 8.637099 CATGATAGACATAACCTTTCTCTCTGA 58.363 37.037 0.00 0.00 37.46 3.27
223 224 8.231692 TGATAGACATAACCTTTCTCTCTGAG 57.768 38.462 0.00 0.00 0.00 3.35
224 225 5.337578 AGACATAACCTTTCTCTCTGAGC 57.662 43.478 0.00 0.00 0.00 4.26
225 226 4.774726 AGACATAACCTTTCTCTCTGAGCA 59.225 41.667 0.00 0.00 0.00 4.26
226 227 5.247110 AGACATAACCTTTCTCTCTGAGCAA 59.753 40.000 0.00 0.00 0.00 3.91
227 228 5.869579 ACATAACCTTTCTCTCTGAGCAAA 58.130 37.500 0.00 1.08 0.00 3.68
228 229 6.479884 ACATAACCTTTCTCTCTGAGCAAAT 58.520 36.000 0.00 0.00 0.00 2.32
229 230 6.373774 ACATAACCTTTCTCTCTGAGCAAATG 59.626 38.462 0.00 2.04 0.00 2.32
230 231 3.080319 ACCTTTCTCTCTGAGCAAATGC 58.920 45.455 0.00 0.00 42.49 3.56
240 241 3.185155 GCAAATGCTCTCGCTGCT 58.815 55.556 0.00 0.00 38.21 4.24
241 242 2.387309 GCAAATGCTCTCGCTGCTA 58.613 52.632 0.00 0.00 38.21 3.49
242 243 0.729116 GCAAATGCTCTCGCTGCTAA 59.271 50.000 0.00 0.00 38.21 3.09
243 244 1.332997 GCAAATGCTCTCGCTGCTAAT 59.667 47.619 0.00 0.00 38.21 1.73
244 245 2.223433 GCAAATGCTCTCGCTGCTAATT 60.223 45.455 0.00 0.00 38.21 1.40
245 246 3.002656 GCAAATGCTCTCGCTGCTAATTA 59.997 43.478 0.00 0.00 38.21 1.40
246 247 4.770287 CAAATGCTCTCGCTGCTAATTAG 58.230 43.478 8.20 8.20 36.97 1.73
260 261 5.697473 GCTAATTAGCCTTTCCAGGAATC 57.303 43.478 24.34 0.00 44.19 2.52
261 262 4.214332 GCTAATTAGCCTTTCCAGGAATCG 59.786 45.833 24.34 0.00 44.19 3.34
262 263 2.038387 TTAGCCTTTCCAGGAATCGC 57.962 50.000 1.58 7.78 44.19 4.58
263 264 0.180406 TAGCCTTTCCAGGAATCGCC 59.820 55.000 14.66 0.86 44.19 5.54
264 265 2.121538 GCCTTTCCAGGAATCGCCC 61.122 63.158 1.58 0.00 44.19 6.13
265 266 1.453928 CCTTTCCAGGAATCGCCCC 60.454 63.158 1.58 0.00 44.19 5.80
266 267 1.609783 CTTTCCAGGAATCGCCCCT 59.390 57.895 1.58 0.00 37.37 4.79
267 268 0.464554 CTTTCCAGGAATCGCCCCTC 60.465 60.000 1.58 0.00 37.37 4.30
268 269 1.921869 TTTCCAGGAATCGCCCCTCC 61.922 60.000 1.58 0.00 37.37 4.30
269 270 2.770048 CCAGGAATCGCCCCTCCT 60.770 66.667 0.00 0.00 43.12 3.69
270 271 2.378634 CCAGGAATCGCCCCTCCTT 61.379 63.158 0.00 0.00 40.22 3.36
271 272 1.147153 CAGGAATCGCCCCTCCTTC 59.853 63.158 0.00 0.00 40.22 3.46
272 273 1.003573 AGGAATCGCCCCTCCTTCT 59.996 57.895 0.00 0.00 39.08 2.85
273 274 1.051556 AGGAATCGCCCCTCCTTCTC 61.052 60.000 0.00 0.00 39.08 2.87
274 275 1.448069 GAATCGCCCCTCCTTCTCC 59.552 63.158 0.00 0.00 0.00 3.71
275 276 2.046009 GAATCGCCCCTCCTTCTCCC 62.046 65.000 0.00 0.00 0.00 4.30
276 277 2.840203 AATCGCCCCTCCTTCTCCCA 62.840 60.000 0.00 0.00 0.00 4.37
277 278 3.787001 CGCCCCTCCTTCTCCCAC 61.787 72.222 0.00 0.00 0.00 4.61
278 279 3.412408 GCCCCTCCTTCTCCCACC 61.412 72.222 0.00 0.00 0.00 4.61
279 280 2.692741 CCCCTCCTTCTCCCACCC 60.693 72.222 0.00 0.00 0.00 4.61
280 281 2.456840 CCCTCCTTCTCCCACCCT 59.543 66.667 0.00 0.00 0.00 4.34
281 282 1.229984 CCCTCCTTCTCCCACCCTT 60.230 63.158 0.00 0.00 0.00 3.95
282 283 0.846870 CCCTCCTTCTCCCACCCTTT 60.847 60.000 0.00 0.00 0.00 3.11
283 284 0.329596 CCTCCTTCTCCCACCCTTTG 59.670 60.000 0.00 0.00 0.00 2.77
284 285 0.322906 CTCCTTCTCCCACCCTTTGC 60.323 60.000 0.00 0.00 0.00 3.68
285 286 0.772124 TCCTTCTCCCACCCTTTGCT 60.772 55.000 0.00 0.00 0.00 3.91
286 287 0.113190 CCTTCTCCCACCCTTTGCTT 59.887 55.000 0.00 0.00 0.00 3.91
287 288 1.481242 CCTTCTCCCACCCTTTGCTTT 60.481 52.381 0.00 0.00 0.00 3.51
288 289 1.615392 CTTCTCCCACCCTTTGCTTTG 59.385 52.381 0.00 0.00 0.00 2.77
289 290 0.555769 TCTCCCACCCTTTGCTTTGT 59.444 50.000 0.00 0.00 0.00 2.83
290 291 1.777878 TCTCCCACCCTTTGCTTTGTA 59.222 47.619 0.00 0.00 0.00 2.41
291 292 2.378547 TCTCCCACCCTTTGCTTTGTAT 59.621 45.455 0.00 0.00 0.00 2.29
292 293 2.755103 CTCCCACCCTTTGCTTTGTATC 59.245 50.000 0.00 0.00 0.00 2.24
293 294 1.824852 CCCACCCTTTGCTTTGTATCC 59.175 52.381 0.00 0.00 0.00 2.59
294 295 2.557452 CCCACCCTTTGCTTTGTATCCT 60.557 50.000 0.00 0.00 0.00 3.24
295 296 3.165071 CCACCCTTTGCTTTGTATCCTT 58.835 45.455 0.00 0.00 0.00 3.36
296 297 3.578282 CCACCCTTTGCTTTGTATCCTTT 59.422 43.478 0.00 0.00 0.00 3.11
297 298 4.040339 CCACCCTTTGCTTTGTATCCTTTT 59.960 41.667 0.00 0.00 0.00 2.27
298 299 5.454613 CCACCCTTTGCTTTGTATCCTTTTT 60.455 40.000 0.00 0.00 0.00 1.94
299 300 5.696270 CACCCTTTGCTTTGTATCCTTTTTC 59.304 40.000 0.00 0.00 0.00 2.29
300 301 5.365314 ACCCTTTGCTTTGTATCCTTTTTCA 59.635 36.000 0.00 0.00 0.00 2.69
301 302 5.928264 CCCTTTGCTTTGTATCCTTTTTCAG 59.072 40.000 0.00 0.00 0.00 3.02
302 303 5.928264 CCTTTGCTTTGTATCCTTTTTCAGG 59.072 40.000 0.00 0.00 45.64 3.86
303 304 6.462909 CCTTTGCTTTGTATCCTTTTTCAGGT 60.463 38.462 0.00 0.00 44.37 4.00
304 305 5.705609 TGCTTTGTATCCTTTTTCAGGTC 57.294 39.130 0.00 0.00 44.37 3.85
305 306 5.385198 TGCTTTGTATCCTTTTTCAGGTCT 58.615 37.500 0.00 0.00 44.37 3.85
306 307 5.241506 TGCTTTGTATCCTTTTTCAGGTCTG 59.758 40.000 0.00 0.00 44.37 3.51
307 308 5.335976 GCTTTGTATCCTTTTTCAGGTCTGG 60.336 44.000 0.00 0.00 44.37 3.86
308 309 4.993705 TGTATCCTTTTTCAGGTCTGGT 57.006 40.909 0.00 0.00 44.37 4.00
309 310 4.651778 TGTATCCTTTTTCAGGTCTGGTG 58.348 43.478 0.00 0.00 44.37 4.17
310 311 4.349636 TGTATCCTTTTTCAGGTCTGGTGA 59.650 41.667 0.00 0.00 44.37 4.02
311 312 4.664688 ATCCTTTTTCAGGTCTGGTGAT 57.335 40.909 0.00 0.00 44.37 3.06
312 313 3.754965 TCCTTTTTCAGGTCTGGTGATG 58.245 45.455 0.00 0.00 44.37 3.07
313 314 2.821969 CCTTTTTCAGGTCTGGTGATGG 59.178 50.000 0.00 0.00 37.99 3.51
314 315 1.909700 TTTTCAGGTCTGGTGATGGC 58.090 50.000 0.00 0.00 0.00 4.40
315 316 0.038166 TTTCAGGTCTGGTGATGGCC 59.962 55.000 0.00 0.00 0.00 5.36
316 317 0.842030 TTCAGGTCTGGTGATGGCCT 60.842 55.000 3.32 0.00 0.00 5.19
317 318 1.077930 CAGGTCTGGTGATGGCCTG 60.078 63.158 3.32 0.00 40.38 4.85
318 319 2.439156 GGTCTGGTGATGGCCTGC 60.439 66.667 3.32 0.00 0.00 4.85
319 320 2.673523 GTCTGGTGATGGCCTGCT 59.326 61.111 3.32 0.00 0.00 4.24
320 321 1.748122 GTCTGGTGATGGCCTGCTG 60.748 63.158 3.32 0.00 0.00 4.41
321 322 3.138798 CTGGTGATGGCCTGCTGC 61.139 66.667 3.32 0.00 40.16 5.25
322 323 3.931190 CTGGTGATGGCCTGCTGCA 62.931 63.158 3.32 0.88 43.89 4.41
323 324 3.446570 GGTGATGGCCTGCTGCAC 61.447 66.667 3.32 4.92 43.89 4.57
324 325 2.674033 GTGATGGCCTGCTGCACA 60.674 61.111 3.32 0.00 43.89 4.57
325 326 2.674033 TGATGGCCTGCTGCACAC 60.674 61.111 3.32 0.00 43.89 3.82
326 327 2.674033 GATGGCCTGCTGCACACA 60.674 61.111 3.32 0.00 43.89 3.72
327 328 2.203523 ATGGCCTGCTGCACACAA 60.204 55.556 3.32 0.00 43.89 3.33
328 329 1.601419 GATGGCCTGCTGCACACAAT 61.601 55.000 3.32 0.00 43.89 2.71
329 330 1.884075 ATGGCCTGCTGCACACAATG 61.884 55.000 3.32 0.00 43.89 2.82
330 331 2.567497 GGCCTGCTGCACACAATGT 61.567 57.895 0.00 0.00 43.89 2.71
341 342 2.850321 CACACAATGTGCGGTGATAAC 58.150 47.619 14.01 0.00 41.89 1.89
342 343 2.225255 CACACAATGTGCGGTGATAACA 59.775 45.455 14.01 0.00 41.89 2.41
343 344 3.081061 ACACAATGTGCGGTGATAACAT 58.919 40.909 14.01 0.00 36.98 2.71
344 345 3.126858 ACACAATGTGCGGTGATAACATC 59.873 43.478 14.01 0.00 36.98 3.06
345 346 3.126686 CACAATGTGCGGTGATAACATCA 59.873 43.478 0.00 0.00 37.18 3.07
346 347 7.321963 ACACAATGTGCGGTGATAACATCAC 62.322 44.000 14.01 10.21 46.50 3.06
361 362 8.892723 TGATAACATCACCTTCATGTAAATGAC 58.107 33.333 0.00 0.00 33.12 3.06
362 363 9.113838 GATAACATCACCTTCATGTAAATGACT 57.886 33.333 0.00 0.00 33.12 3.41
363 364 6.992063 ACATCACCTTCATGTAAATGACTC 57.008 37.500 0.00 0.00 32.48 3.36
364 365 5.882557 ACATCACCTTCATGTAAATGACTCC 59.117 40.000 0.00 0.00 32.48 3.85
365 366 4.503910 TCACCTTCATGTAAATGACTCCG 58.496 43.478 0.00 0.00 0.00 4.63
366 367 3.623060 CACCTTCATGTAAATGACTCCGG 59.377 47.826 0.00 0.00 0.00 5.14
367 368 3.263425 ACCTTCATGTAAATGACTCCGGT 59.737 43.478 0.00 0.00 0.00 5.28
368 369 3.871594 CCTTCATGTAAATGACTCCGGTC 59.128 47.826 0.00 0.00 42.42 4.79
418 419 9.971922 AAATGCATAAATAGAAAATGCTCTACC 57.028 29.630 0.00 0.00 44.96 3.18
419 420 8.930846 ATGCATAAATAGAAAATGCTCTACCT 57.069 30.769 0.00 0.00 44.96 3.08
420 421 8.752005 TGCATAAATAGAAAATGCTCTACCTT 57.248 30.769 7.89 0.00 44.96 3.50
421 422 9.189156 TGCATAAATAGAAAATGCTCTACCTTT 57.811 29.630 7.89 0.00 44.96 3.11
460 461 6.381498 TGTTTACAATGGGATTCACTAGGA 57.619 37.500 0.00 0.00 0.00 2.94
533 534 4.686554 TGTTCAACGGTTTTTGGTTCAAAG 59.313 37.500 0.00 0.00 34.72 2.77
622 646 1.124297 GATCGCACACACTTGTACGTG 59.876 52.381 0.00 0.00 42.26 4.49
627 651 2.638673 CACACACTTGTACGTGCATTG 58.361 47.619 7.30 10.43 38.45 2.82
732 767 4.342378 TGCCTTCTCATAGTAGCTCGAATT 59.658 41.667 0.00 0.00 0.00 2.17
762 797 1.816224 GGTCTATCCAGCTCCGAGATC 59.184 57.143 0.00 0.00 35.97 2.75
797 832 1.982395 TCTTCGTGCATCCGTCCCT 60.982 57.895 0.00 0.00 0.00 4.20
798 833 1.811266 CTTCGTGCATCCGTCCCTG 60.811 63.158 0.00 0.00 0.00 4.45
799 834 3.950794 TTCGTGCATCCGTCCCTGC 62.951 63.158 0.00 0.00 38.87 4.85
849 885 4.706527 CAGCGTCTTCTTTCTGAATTGAC 58.293 43.478 0.00 0.00 33.71 3.18
858 894 1.432514 TCTGAATTGACAGCGAGCAC 58.567 50.000 0.00 0.00 37.75 4.40
878 914 0.256752 TGCATGCAACTCTAGCCCAT 59.743 50.000 20.30 0.00 0.00 4.00
897 933 5.413833 GCCCATAATCATCCATCTTACTGTG 59.586 44.000 0.00 0.00 0.00 3.66
959 1000 0.895530 CCTACGACCTTCCTTCTGCA 59.104 55.000 0.00 0.00 0.00 4.41
960 1001 1.404315 CCTACGACCTTCCTTCTGCAC 60.404 57.143 0.00 0.00 0.00 4.57
961 1002 1.546476 CTACGACCTTCCTTCTGCACT 59.454 52.381 0.00 0.00 0.00 4.40
962 1003 0.034059 ACGACCTTCCTTCTGCACTG 59.966 55.000 0.00 0.00 0.00 3.66
963 1004 1.294659 CGACCTTCCTTCTGCACTGC 61.295 60.000 0.00 0.00 0.00 4.40
970 1011 1.241990 CCTTCTGCACTGCACTGCAT 61.242 55.000 19.38 0.00 46.05 3.96
1097 1138 3.670523 CACACATTCTCTGTACGTGACTG 59.329 47.826 0.00 0.00 35.02 3.51
1167 1214 2.173951 CTGCGTGCACATTTCTGCGA 62.174 55.000 18.64 1.56 40.31 5.10
1205 1252 5.165676 ACAGCTATTTCATAACGTTGACGA 58.834 37.500 11.99 1.30 43.02 4.20
1595 1654 1.004200 CGAACCGCACTACCCCTTT 60.004 57.895 0.00 0.00 0.00 3.11
1604 1663 3.675619 CTACCCCTTTCCCACGCCG 62.676 68.421 0.00 0.00 0.00 6.46
1751 1810 3.524606 GGCTACGAGCTGGCCGTA 61.525 66.667 0.00 6.07 41.99 4.02
2062 2121 1.071385 GGCAGCAGCTGGTATGAGTAT 59.929 52.381 24.13 0.00 41.70 2.12
2126 2185 1.406887 GCCCAAGATTTCTACGGCAGA 60.407 52.381 11.18 0.00 39.07 4.26
2192 2251 3.490759 GACACGCGGATGCTGGTG 61.491 66.667 12.47 0.00 38.12 4.17
2474 2533 2.594592 AGGCTGCGGTTCAACACC 60.595 61.111 0.00 0.00 43.16 4.16
2588 2647 3.959975 GCCGGCAACTTCAACGCA 61.960 61.111 24.80 0.00 0.00 5.24
2699 2758 2.978010 GCCGACAACCCAGGTGTG 60.978 66.667 0.00 0.00 0.00 3.82
2774 2833 3.399181 GAGGTGGATGACGGCCCA 61.399 66.667 0.00 0.00 0.00 5.36
2915 2974 4.055360 GGCTGTTTGAAATGGGTGTAAAC 58.945 43.478 0.00 0.00 33.20 2.01
3011 3122 4.159244 AGCGGGGCACATAATTTACTAA 57.841 40.909 0.00 0.00 0.00 2.24
3012 3123 4.725490 AGCGGGGCACATAATTTACTAAT 58.275 39.130 0.00 0.00 0.00 1.73
3013 3124 5.871834 AGCGGGGCACATAATTTACTAATA 58.128 37.500 0.00 0.00 0.00 0.98
3014 3125 5.938125 AGCGGGGCACATAATTTACTAATAG 59.062 40.000 0.00 0.00 0.00 1.73
3015 3126 5.704053 GCGGGGCACATAATTTACTAATAGT 59.296 40.000 0.00 0.00 0.00 2.12
3016 3127 6.875195 GCGGGGCACATAATTTACTAATAGTA 59.125 38.462 0.00 0.00 0.00 1.82
3037 3148 9.863650 ATAGTACTGATTTCTAAGGTACTAGCA 57.136 33.333 5.39 0.00 44.02 3.49
3038 3149 7.998580 AGTACTGATTTCTAAGGTACTAGCAC 58.001 38.462 0.00 0.00 40.49 4.40
3276 4943 1.463444 GCCAACTAATGTCTTTCGCGT 59.537 47.619 5.77 0.00 0.00 6.01
3307 4978 6.019961 CGCACACACACAAAAACTAATGAAAT 60.020 34.615 0.00 0.00 0.00 2.17
3356 5075 6.207025 GCAAGACGGTAATAGAGGATTAGAGA 59.793 42.308 0.00 0.00 30.37 3.10
3381 5100 4.286808 TCAGTTTCACCAGATGAGAATGGA 59.713 41.667 0.00 0.00 37.91 3.41
3388 5107 2.423803 CCAGATGAGAATGGAATGGGCA 60.424 50.000 0.00 0.00 39.02 5.36
3429 5148 2.053627 GCAGATTGGAAAGCAAACGTG 58.946 47.619 0.00 0.00 32.26 4.49
3435 5154 1.134220 TGGAAAGCAAACGTGGACTCT 60.134 47.619 0.00 0.00 0.00 3.24
3438 5157 3.059120 GGAAAGCAAACGTGGACTCTAAC 60.059 47.826 0.00 0.00 0.00 2.34
3440 5159 1.414919 AGCAAACGTGGACTCTAACCA 59.585 47.619 0.00 0.00 34.84 3.67
3442 5161 2.159627 GCAAACGTGGACTCTAACCATG 59.840 50.000 0.00 0.00 46.31 3.66
3445 5164 1.825474 ACGTGGACTCTAACCATGAGG 59.175 52.381 12.22 0.00 44.44 3.86
3457 5176 0.682209 CCATGAGGTGGCCTTCCAAG 60.682 60.000 17.31 2.70 45.53 3.61
3472 5194 3.418684 TCCAAGTAGAAGAAGGGCAAC 57.581 47.619 0.00 0.00 0.00 4.17
3495 5217 1.267574 CCAAGGGTAGGAGCAGAGCA 61.268 60.000 0.00 0.00 0.00 4.26
3537 5260 3.539604 CCCACAGATTCAGGTTGAGATC 58.460 50.000 0.00 0.00 0.00 2.75
3548 5271 1.001631 TTGAGATCGGCAGAGGGGA 59.998 57.895 0.00 0.00 0.00 4.81
3549 5272 1.330655 TTGAGATCGGCAGAGGGGAC 61.331 60.000 0.00 0.00 0.00 4.46
3551 5274 1.306141 AGATCGGCAGAGGGGACAA 60.306 57.895 0.00 0.00 0.00 3.18
3555 5278 2.409870 CGGCAGAGGGGACAAATGC 61.410 63.158 0.00 0.00 35.38 3.56
3559 5282 1.551883 GCAGAGGGGACAAATGCAATT 59.448 47.619 0.00 0.00 38.98 2.32
3587 5310 6.159988 AGTGTCTCAATGTCTGCTTAACTAC 58.840 40.000 0.00 0.00 0.00 2.73
3588 5311 6.015010 AGTGTCTCAATGTCTGCTTAACTACT 60.015 38.462 0.00 0.00 0.00 2.57
3589 5312 6.309251 GTGTCTCAATGTCTGCTTAACTACTC 59.691 42.308 0.00 0.00 0.00 2.59
3590 5313 5.808030 GTCTCAATGTCTGCTTAACTACTCC 59.192 44.000 0.00 0.00 0.00 3.85
3591 5314 5.086104 TCAATGTCTGCTTAACTACTCCC 57.914 43.478 0.00 0.00 0.00 4.30
3592 5315 4.777896 TCAATGTCTGCTTAACTACTCCCT 59.222 41.667 0.00 0.00 0.00 4.20
3593 5316 5.105310 TCAATGTCTGCTTAACTACTCCCTC 60.105 44.000 0.00 0.00 0.00 4.30
3594 5317 3.097614 TGTCTGCTTAACTACTCCCTCC 58.902 50.000 0.00 0.00 0.00 4.30
3595 5318 2.099427 GTCTGCTTAACTACTCCCTCCG 59.901 54.545 0.00 0.00 0.00 4.63
3596 5319 1.409427 CTGCTTAACTACTCCCTCCGG 59.591 57.143 0.00 0.00 0.00 5.14
3597 5320 1.272872 TGCTTAACTACTCCCTCCGGT 60.273 52.381 0.00 0.00 0.00 5.28
3598 5321 1.408340 GCTTAACTACTCCCTCCGGTC 59.592 57.143 0.00 0.00 0.00 4.79
3599 5322 2.030371 CTTAACTACTCCCTCCGGTCC 58.970 57.143 0.00 0.00 0.00 4.46
3600 5323 1.302907 TAACTACTCCCTCCGGTCCT 58.697 55.000 0.00 0.00 0.00 3.85
3601 5324 0.412640 AACTACTCCCTCCGGTCCTT 59.587 55.000 0.00 0.00 0.00 3.36
3602 5325 0.412640 ACTACTCCCTCCGGTCCTTT 59.587 55.000 0.00 0.00 0.00 3.11
3603 5326 1.203275 ACTACTCCCTCCGGTCCTTTT 60.203 52.381 0.00 0.00 0.00 2.27
3604 5327 1.907255 CTACTCCCTCCGGTCCTTTTT 59.093 52.381 0.00 0.00 0.00 1.94
3605 5328 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
3606 5329 1.907255 ACTCCCTCCGGTCCTTTTTAG 59.093 52.381 0.00 0.00 0.00 1.85
3607 5330 1.907255 CTCCCTCCGGTCCTTTTTAGT 59.093 52.381 0.00 0.00 0.00 2.24
3608 5331 2.305052 CTCCCTCCGGTCCTTTTTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
3609 5332 2.712627 TCCCTCCGGTCCTTTTTAGTTT 59.287 45.455 0.00 0.00 0.00 2.66
3610 5333 2.817844 CCCTCCGGTCCTTTTTAGTTTG 59.182 50.000 0.00 0.00 0.00 2.93
3611 5334 2.228103 CCTCCGGTCCTTTTTAGTTTGC 59.772 50.000 0.00 0.00 0.00 3.68
3612 5335 2.882137 CTCCGGTCCTTTTTAGTTTGCA 59.118 45.455 0.00 0.00 0.00 4.08
3613 5336 3.492337 TCCGGTCCTTTTTAGTTTGCAT 58.508 40.909 0.00 0.00 0.00 3.96
3614 5337 4.653868 TCCGGTCCTTTTTAGTTTGCATA 58.346 39.130 0.00 0.00 0.00 3.14
3615 5338 5.258051 TCCGGTCCTTTTTAGTTTGCATAT 58.742 37.500 0.00 0.00 0.00 1.78
3616 5339 6.416415 TCCGGTCCTTTTTAGTTTGCATATA 58.584 36.000 0.00 0.00 0.00 0.86
3617 5340 6.885376 TCCGGTCCTTTTTAGTTTGCATATAA 59.115 34.615 0.00 0.00 0.00 0.98
3618 5341 7.066525 TCCGGTCCTTTTTAGTTTGCATATAAG 59.933 37.037 0.00 0.00 0.00 1.73
3619 5342 7.066525 CCGGTCCTTTTTAGTTTGCATATAAGA 59.933 37.037 0.00 0.00 0.00 2.10
3620 5343 8.621286 CGGTCCTTTTTAGTTTGCATATAAGAT 58.379 33.333 0.00 0.00 0.00 2.40
3651 5374 9.925268 TTGAAGTTAAATCTCGTAAAGTTTGAC 57.075 29.630 0.00 0.00 0.00 3.18
3652 5375 8.553696 TGAAGTTAAATCTCGTAAAGTTTGACC 58.446 33.333 0.00 0.00 0.00 4.02
3653 5376 8.441312 AAGTTAAATCTCGTAAAGTTTGACCA 57.559 30.769 0.00 0.00 0.00 4.02
3654 5377 8.441312 AGTTAAATCTCGTAAAGTTTGACCAA 57.559 30.769 0.00 0.00 0.00 3.67
3655 5378 8.340443 AGTTAAATCTCGTAAAGTTTGACCAAC 58.660 33.333 0.00 0.00 35.32 3.77
3705 5428 9.398538 TCACAATGTGAAATCATGATCATTAGA 57.601 29.630 14.37 14.26 39.78 2.10
3708 5431 9.129209 CAATGTGAAATCATGATCATTAGATGC 57.871 33.333 15.97 4.28 33.72 3.91
3709 5432 6.894828 TGTGAAATCATGATCATTAGATGCG 58.105 36.000 9.06 0.00 33.72 4.73
3710 5433 6.484308 TGTGAAATCATGATCATTAGATGCGT 59.516 34.615 9.06 0.00 33.72 5.24
3711 5434 7.012610 TGTGAAATCATGATCATTAGATGCGTT 59.987 33.333 9.06 0.00 33.72 4.84
3712 5435 7.322938 GTGAAATCATGATCATTAGATGCGTTG 59.677 37.037 9.06 0.00 33.72 4.10
3713 5436 6.872628 AATCATGATCATTAGATGCGTTGT 57.127 33.333 9.06 0.00 33.72 3.32
3714 5437 5.662211 TCATGATCATTAGATGCGTTGTG 57.338 39.130 5.16 0.00 33.72 3.33
3715 5438 5.358922 TCATGATCATTAGATGCGTTGTGA 58.641 37.500 5.16 0.00 33.72 3.58
3716 5439 5.234972 TCATGATCATTAGATGCGTTGTGAC 59.765 40.000 5.16 0.00 33.72 3.67
3717 5440 4.758688 TGATCATTAGATGCGTTGTGACT 58.241 39.130 0.00 0.00 33.72 3.41
3718 5441 5.178061 TGATCATTAGATGCGTTGTGACTT 58.822 37.500 0.00 0.00 33.72 3.01
3719 5442 6.337356 TGATCATTAGATGCGTTGTGACTTA 58.663 36.000 0.00 0.00 33.72 2.24
3720 5443 6.816140 TGATCATTAGATGCGTTGTGACTTAA 59.184 34.615 0.00 0.00 33.72 1.85
3721 5444 7.333174 TGATCATTAGATGCGTTGTGACTTAAA 59.667 33.333 0.00 0.00 33.72 1.52
3722 5445 7.609760 TCATTAGATGCGTTGTGACTTAAAT 57.390 32.000 0.00 0.00 0.00 1.40
3723 5446 8.039603 TCATTAGATGCGTTGTGACTTAAATT 57.960 30.769 0.00 0.00 0.00 1.82
3724 5447 8.511321 TCATTAGATGCGTTGTGACTTAAATTT 58.489 29.630 0.00 0.00 0.00 1.82
3725 5448 9.128107 CATTAGATGCGTTGTGACTTAAATTTT 57.872 29.630 0.00 0.00 0.00 1.82
3726 5449 9.691362 ATTAGATGCGTTGTGACTTAAATTTTT 57.309 25.926 0.00 0.00 0.00 1.94
3727 5450 7.393551 AGATGCGTTGTGACTTAAATTTTTG 57.606 32.000 0.00 0.00 0.00 2.44
3728 5451 6.978080 AGATGCGTTGTGACTTAAATTTTTGT 59.022 30.769 0.00 0.00 0.00 2.83
3729 5452 8.132362 AGATGCGTTGTGACTTAAATTTTTGTA 58.868 29.630 0.00 0.00 0.00 2.41
3730 5453 8.810652 ATGCGTTGTGACTTAAATTTTTGTAT 57.189 26.923 0.00 0.00 0.00 2.29
3731 5454 8.635877 TGCGTTGTGACTTAAATTTTTGTATT 57.364 26.923 0.00 0.00 0.00 1.89
3732 5455 8.535592 TGCGTTGTGACTTAAATTTTTGTATTG 58.464 29.630 0.00 0.00 0.00 1.90
3733 5456 8.536407 GCGTTGTGACTTAAATTTTTGTATTGT 58.464 29.630 0.00 0.00 0.00 2.71
3809 5532 8.506168 ACTTTACAAAGTTTGACTTCAGATGA 57.494 30.769 22.23 0.00 46.52 2.92
3810 5533 9.125026 ACTTTACAAAGTTTGACTTCAGATGAT 57.875 29.630 22.23 0.00 46.52 2.45
3811 5534 9.956720 CTTTACAAAGTTTGACTTCAGATGATT 57.043 29.630 22.23 0.00 37.47 2.57
3812 5535 9.950680 TTTACAAAGTTTGACTTCAGATGATTC 57.049 29.630 22.23 0.00 37.47 2.52
3813 5536 7.814264 ACAAAGTTTGACTTCAGATGATTCT 57.186 32.000 22.23 0.00 37.47 2.40
3814 5537 8.230472 ACAAAGTTTGACTTCAGATGATTCTT 57.770 30.769 22.23 0.00 37.47 2.52
3815 5538 9.342308 ACAAAGTTTGACTTCAGATGATTCTTA 57.658 29.630 22.23 0.00 37.47 2.10
3820 5543 9.875675 GTTTGACTTCAGATGATTCTTATATGC 57.124 33.333 0.00 0.00 0.00 3.14
3821 5544 9.617523 TTTGACTTCAGATGATTCTTATATGCA 57.382 29.630 0.00 0.00 0.00 3.96
3822 5545 8.828688 TGACTTCAGATGATTCTTATATGCAG 57.171 34.615 0.00 0.00 0.00 4.41
3823 5546 8.645110 TGACTTCAGATGATTCTTATATGCAGA 58.355 33.333 0.00 0.00 0.00 4.26
3824 5547 9.142515 GACTTCAGATGATTCTTATATGCAGAG 57.857 37.037 0.00 0.00 0.00 3.35
3825 5548 8.649591 ACTTCAGATGATTCTTATATGCAGAGT 58.350 33.333 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.611473 CGAACACAAGAGATCACCTGCT 60.611 50.000 0.00 0.00 0.00 4.24
1 2 1.728971 CGAACACAAGAGATCACCTGC 59.271 52.381 0.00 0.00 0.00 4.85
2 3 1.728971 GCGAACACAAGAGATCACCTG 59.271 52.381 0.00 0.00 0.00 4.00
3 4 1.344438 TGCGAACACAAGAGATCACCT 59.656 47.619 0.00 0.00 0.00 4.00
4 5 1.728971 CTGCGAACACAAGAGATCACC 59.271 52.381 0.00 0.00 0.00 4.02
5 6 1.127582 GCTGCGAACACAAGAGATCAC 59.872 52.381 0.00 0.00 0.00 3.06
6 7 1.270252 TGCTGCGAACACAAGAGATCA 60.270 47.619 0.00 0.00 0.00 2.92
7 8 1.392853 CTGCTGCGAACACAAGAGATC 59.607 52.381 0.00 0.00 0.00 2.75
8 9 1.270518 ACTGCTGCGAACACAAGAGAT 60.271 47.619 0.00 0.00 0.00 2.75
9 10 0.104855 ACTGCTGCGAACACAAGAGA 59.895 50.000 0.00 0.00 0.00 3.10
10 11 0.510359 GACTGCTGCGAACACAAGAG 59.490 55.000 0.00 0.00 0.00 2.85
11 12 1.215014 CGACTGCTGCGAACACAAGA 61.215 55.000 0.00 0.00 0.00 3.02
12 13 1.202568 CGACTGCTGCGAACACAAG 59.797 57.895 0.00 0.00 0.00 3.16
13 14 2.881266 GCGACTGCTGCGAACACAA 61.881 57.895 10.56 0.00 38.39 3.33
14 15 3.337889 GCGACTGCTGCGAACACA 61.338 61.111 10.56 0.00 38.39 3.72
35 36 4.988598 ACTTGGTGCCGTGCCGAG 62.989 66.667 0.00 0.00 42.03 4.63
40 41 2.985282 ATGCCACTTGGTGCCGTG 60.985 61.111 0.00 0.00 37.57 4.94
41 42 2.985282 CATGCCACTTGGTGCCGT 60.985 61.111 0.00 0.00 37.57 5.68
42 43 2.981560 GACATGCCACTTGGTGCCG 61.982 63.158 0.00 0.00 37.57 5.69
43 44 1.181098 AAGACATGCCACTTGGTGCC 61.181 55.000 0.00 0.00 37.57 5.01
44 45 0.242017 GAAGACATGCCACTTGGTGC 59.758 55.000 0.00 0.00 37.57 5.01
45 46 1.901591 AGAAGACATGCCACTTGGTG 58.098 50.000 0.00 0.00 37.57 4.17
46 47 2.158623 TGAAGAAGACATGCCACTTGGT 60.159 45.455 0.00 0.00 37.57 3.67
47 48 2.227388 GTGAAGAAGACATGCCACTTGG 59.773 50.000 0.00 0.00 38.53 3.61
48 49 2.880268 TGTGAAGAAGACATGCCACTTG 59.120 45.455 0.00 0.00 0.00 3.16
49 50 3.144506 CTGTGAAGAAGACATGCCACTT 58.855 45.455 0.00 0.00 0.00 3.16
50 51 2.775890 CTGTGAAGAAGACATGCCACT 58.224 47.619 0.00 0.00 0.00 4.00
51 52 1.198637 GCTGTGAAGAAGACATGCCAC 59.801 52.381 0.00 0.00 0.00 5.01
52 53 1.202794 TGCTGTGAAGAAGACATGCCA 60.203 47.619 0.00 0.00 0.00 4.92
53 54 1.527034 TGCTGTGAAGAAGACATGCC 58.473 50.000 0.00 0.00 0.00 4.40
54 55 3.132629 CATGCTGTGAAGAAGACATGC 57.867 47.619 0.00 0.00 0.00 4.06
55 56 2.486592 TGCATGCTGTGAAGAAGACATG 59.513 45.455 20.33 0.00 38.30 3.21
56 57 2.786777 TGCATGCTGTGAAGAAGACAT 58.213 42.857 20.33 0.00 0.00 3.06
57 58 2.259266 TGCATGCTGTGAAGAAGACA 57.741 45.000 20.33 0.00 0.00 3.41
58 59 3.937706 ACTATGCATGCTGTGAAGAAGAC 59.062 43.478 20.33 0.00 0.00 3.01
59 60 4.186926 GACTATGCATGCTGTGAAGAAGA 58.813 43.478 20.33 0.00 0.00 2.87
60 61 3.001026 CGACTATGCATGCTGTGAAGAAG 59.999 47.826 20.33 6.89 0.00 2.85
61 62 2.931969 CGACTATGCATGCTGTGAAGAA 59.068 45.455 20.33 0.00 0.00 2.52
62 63 2.543641 CGACTATGCATGCTGTGAAGA 58.456 47.619 20.33 0.00 0.00 2.87
63 64 1.004185 GCGACTATGCATGCTGTGAAG 60.004 52.381 20.33 10.91 34.15 3.02
64 65 1.009078 GCGACTATGCATGCTGTGAA 58.991 50.000 20.33 0.00 34.15 3.18
65 66 0.811219 GGCGACTATGCATGCTGTGA 60.811 55.000 20.33 0.00 36.28 3.58
66 67 1.645455 GGCGACTATGCATGCTGTG 59.355 57.895 20.33 10.73 36.28 3.66
67 68 1.524621 GGGCGACTATGCATGCTGT 60.525 57.895 20.33 14.64 36.28 4.40
68 69 0.816825 AAGGGCGACTATGCATGCTG 60.817 55.000 20.33 11.45 36.28 4.41
69 70 0.107017 AAAGGGCGACTATGCATGCT 60.107 50.000 20.33 7.07 36.28 3.79
70 71 0.029834 CAAAGGGCGACTATGCATGC 59.970 55.000 11.82 11.82 36.28 4.06
71 72 0.664761 CCAAAGGGCGACTATGCATG 59.335 55.000 10.16 1.82 36.28 4.06
72 73 0.546122 TCCAAAGGGCGACTATGCAT 59.454 50.000 3.79 3.79 36.28 3.96
73 74 0.326595 TTCCAAAGGGCGACTATGCA 59.673 50.000 0.00 0.00 36.28 3.96
74 75 0.733150 GTTCCAAAGGGCGACTATGC 59.267 55.000 0.00 0.00 0.00 3.14
75 76 1.006832 CGTTCCAAAGGGCGACTATG 58.993 55.000 0.00 0.00 0.00 2.23
76 77 0.743345 GCGTTCCAAAGGGCGACTAT 60.743 55.000 0.00 0.00 0.00 2.12
77 78 1.375013 GCGTTCCAAAGGGCGACTA 60.375 57.895 0.00 0.00 0.00 2.59
78 79 2.668550 GCGTTCCAAAGGGCGACT 60.669 61.111 0.00 0.00 0.00 4.18
79 80 2.458006 CTTGCGTTCCAAAGGGCGAC 62.458 60.000 0.00 0.00 31.94 5.19
80 81 2.203224 TTGCGTTCCAAAGGGCGA 60.203 55.556 0.00 0.00 0.00 5.54
81 82 2.255252 CTTGCGTTCCAAAGGGCG 59.745 61.111 0.00 0.00 31.94 6.13
82 83 1.460273 TTCCTTGCGTTCCAAAGGGC 61.460 55.000 1.82 0.00 31.94 5.19
83 84 1.067635 CATTCCTTGCGTTCCAAAGGG 60.068 52.381 1.82 0.00 31.94 3.95
84 85 1.669795 GCATTCCTTGCGTTCCAAAGG 60.670 52.381 0.00 0.00 42.54 3.11
85 86 1.701704 GCATTCCTTGCGTTCCAAAG 58.298 50.000 0.00 0.00 42.54 2.77
86 87 3.883997 GCATTCCTTGCGTTCCAAA 57.116 47.368 0.00 0.00 42.54 3.28
95 96 2.886523 TCAAACACCTGAGCATTCCTTG 59.113 45.455 0.00 0.00 0.00 3.61
96 97 3.228188 TCAAACACCTGAGCATTCCTT 57.772 42.857 0.00 0.00 0.00 3.36
97 98 2.957402 TCAAACACCTGAGCATTCCT 57.043 45.000 0.00 0.00 0.00 3.36
98 99 2.165030 CCATCAAACACCTGAGCATTCC 59.835 50.000 0.00 0.00 0.00 3.01
99 100 2.165030 CCCATCAAACACCTGAGCATTC 59.835 50.000 0.00 0.00 0.00 2.67
100 101 2.173519 CCCATCAAACACCTGAGCATT 58.826 47.619 0.00 0.00 0.00 3.56
101 102 1.076024 ACCCATCAAACACCTGAGCAT 59.924 47.619 0.00 0.00 0.00 3.79
102 103 0.478072 ACCCATCAAACACCTGAGCA 59.522 50.000 0.00 0.00 0.00 4.26
103 104 1.168714 GACCCATCAAACACCTGAGC 58.831 55.000 0.00 0.00 0.00 4.26
104 105 1.352352 AGGACCCATCAAACACCTGAG 59.648 52.381 0.00 0.00 0.00 3.35
105 106 1.444933 AGGACCCATCAAACACCTGA 58.555 50.000 0.00 0.00 0.00 3.86
106 107 2.292828 AAGGACCCATCAAACACCTG 57.707 50.000 0.00 0.00 0.00 4.00
107 108 2.965147 CAAAAGGACCCATCAAACACCT 59.035 45.455 0.00 0.00 0.00 4.00
108 109 2.037121 CCAAAAGGACCCATCAAACACC 59.963 50.000 0.00 0.00 0.00 4.16
109 110 2.962421 TCCAAAAGGACCCATCAAACAC 59.038 45.455 0.00 0.00 0.00 3.32
110 111 3.320610 TCCAAAAGGACCCATCAAACA 57.679 42.857 0.00 0.00 0.00 2.83
111 112 4.283212 TCATTCCAAAAGGACCCATCAAAC 59.717 41.667 0.00 0.00 0.00 2.93
112 113 4.487804 TCATTCCAAAAGGACCCATCAAA 58.512 39.130 0.00 0.00 0.00 2.69
113 114 4.088634 CTCATTCCAAAAGGACCCATCAA 58.911 43.478 0.00 0.00 0.00 2.57
114 115 3.333381 TCTCATTCCAAAAGGACCCATCA 59.667 43.478 0.00 0.00 0.00 3.07
115 116 3.950395 CTCTCATTCCAAAAGGACCCATC 59.050 47.826 0.00 0.00 0.00 3.51
116 117 3.309410 CCTCTCATTCCAAAAGGACCCAT 60.309 47.826 0.00 0.00 0.00 4.00
117 118 2.041620 CCTCTCATTCCAAAAGGACCCA 59.958 50.000 0.00 0.00 0.00 4.51
118 119 2.728007 CCTCTCATTCCAAAAGGACCC 58.272 52.381 0.00 0.00 0.00 4.46
119 120 2.095461 GCCTCTCATTCCAAAAGGACC 58.905 52.381 0.00 0.00 0.00 4.46
120 121 2.751806 CTGCCTCTCATTCCAAAAGGAC 59.248 50.000 0.00 0.00 0.00 3.85
121 122 2.376518 ACTGCCTCTCATTCCAAAAGGA 59.623 45.455 0.00 0.00 0.00 3.36
122 123 2.800250 ACTGCCTCTCATTCCAAAAGG 58.200 47.619 0.00 0.00 0.00 3.11
123 124 6.599244 TGTATAACTGCCTCTCATTCCAAAAG 59.401 38.462 0.00 0.00 0.00 2.27
124 125 6.480763 TGTATAACTGCCTCTCATTCCAAAA 58.519 36.000 0.00 0.00 0.00 2.44
125 126 6.061022 TGTATAACTGCCTCTCATTCCAAA 57.939 37.500 0.00 0.00 0.00 3.28
126 127 5.674525 CTGTATAACTGCCTCTCATTCCAA 58.325 41.667 0.00 0.00 0.00 3.53
127 128 4.443457 GCTGTATAACTGCCTCTCATTCCA 60.443 45.833 0.00 0.00 37.12 3.53
128 129 4.061596 GCTGTATAACTGCCTCTCATTCC 58.938 47.826 0.00 0.00 37.12 3.01
129 130 4.697514 TGCTGTATAACTGCCTCTCATTC 58.302 43.478 6.48 0.00 41.58 2.67
130 131 4.760530 TGCTGTATAACTGCCTCTCATT 57.239 40.909 6.48 0.00 41.58 2.57
131 132 4.444022 CCTTGCTGTATAACTGCCTCTCAT 60.444 45.833 6.48 0.00 41.58 2.90
132 133 3.118629 CCTTGCTGTATAACTGCCTCTCA 60.119 47.826 6.48 0.00 41.58 3.27
133 134 3.118592 ACCTTGCTGTATAACTGCCTCTC 60.119 47.826 6.48 0.00 41.58 3.20
134 135 2.840651 ACCTTGCTGTATAACTGCCTCT 59.159 45.455 6.48 0.00 41.58 3.69
135 136 3.268023 ACCTTGCTGTATAACTGCCTC 57.732 47.619 6.48 0.00 41.58 4.70
136 137 3.347216 CAACCTTGCTGTATAACTGCCT 58.653 45.455 6.48 0.00 41.58 4.75
137 138 3.764885 CAACCTTGCTGTATAACTGCC 57.235 47.619 6.48 0.00 41.58 4.85
150 151 4.598257 ACGAGATCGGCAACCTTG 57.402 55.556 7.22 0.00 44.95 3.61
158 159 0.242286 CCATAGCCTGACGAGATCGG 59.758 60.000 7.22 0.00 44.95 4.18
159 160 1.198867 CTCCATAGCCTGACGAGATCG 59.801 57.143 0.00 0.00 46.33 3.69
160 161 1.067915 GCTCCATAGCCTGACGAGATC 60.068 57.143 0.00 0.00 43.40 2.75
161 162 0.965439 GCTCCATAGCCTGACGAGAT 59.035 55.000 0.00 0.00 43.40 2.75
162 163 2.420138 GCTCCATAGCCTGACGAGA 58.580 57.895 0.00 0.00 43.40 4.04
172 173 0.596577 TTAGCGCGTAGGCTCCATAG 59.403 55.000 8.43 0.00 43.54 2.23
173 174 1.034356 TTTAGCGCGTAGGCTCCATA 58.966 50.000 8.43 0.00 43.54 2.74
174 175 0.529992 GTTTAGCGCGTAGGCTCCAT 60.530 55.000 8.43 0.00 43.54 3.41
175 176 1.153706 GTTTAGCGCGTAGGCTCCA 60.154 57.895 8.43 0.00 43.54 3.86
176 177 1.881709 GGTTTAGCGCGTAGGCTCC 60.882 63.158 8.43 0.00 43.54 4.70
177 178 1.153706 TGGTTTAGCGCGTAGGCTC 60.154 57.895 8.43 0.00 43.54 4.70
178 179 1.447314 GTGGTTTAGCGCGTAGGCT 60.447 57.895 8.43 0.00 46.88 4.58
179 180 1.087771 ATGTGGTTTAGCGCGTAGGC 61.088 55.000 8.43 0.00 0.00 3.93
180 181 0.650512 CATGTGGTTTAGCGCGTAGG 59.349 55.000 8.43 0.00 0.00 3.18
181 182 1.635844 TCATGTGGTTTAGCGCGTAG 58.364 50.000 8.43 0.00 0.00 3.51
182 183 2.303163 ATCATGTGGTTTAGCGCGTA 57.697 45.000 8.43 0.00 0.00 4.42
183 184 2.159156 TCTATCATGTGGTTTAGCGCGT 60.159 45.455 8.43 0.00 0.00 6.01
184 185 2.218759 GTCTATCATGTGGTTTAGCGCG 59.781 50.000 0.00 0.00 0.00 6.86
185 186 3.194861 TGTCTATCATGTGGTTTAGCGC 58.805 45.455 0.00 0.00 0.00 5.92
186 187 6.073765 GGTTATGTCTATCATGTGGTTTAGCG 60.074 42.308 0.00 0.00 37.91 4.26
187 188 6.992715 AGGTTATGTCTATCATGTGGTTTAGC 59.007 38.462 0.00 0.00 37.91 3.09
188 189 8.964476 AAGGTTATGTCTATCATGTGGTTTAG 57.036 34.615 0.00 0.00 37.91 1.85
189 190 9.391006 GAAAGGTTATGTCTATCATGTGGTTTA 57.609 33.333 0.00 0.00 37.91 2.01
190 191 8.109634 AGAAAGGTTATGTCTATCATGTGGTTT 58.890 33.333 0.00 0.00 37.91 3.27
191 192 7.633789 AGAAAGGTTATGTCTATCATGTGGTT 58.366 34.615 0.00 0.00 37.91 3.67
192 193 7.126421 AGAGAAAGGTTATGTCTATCATGTGGT 59.874 37.037 0.00 0.00 37.91 4.16
193 194 7.504403 AGAGAAAGGTTATGTCTATCATGTGG 58.496 38.462 0.00 0.00 37.91 4.17
194 195 8.420222 AGAGAGAAAGGTTATGTCTATCATGTG 58.580 37.037 0.00 0.00 37.91 3.21
195 196 8.420222 CAGAGAGAAAGGTTATGTCTATCATGT 58.580 37.037 0.00 0.00 37.91 3.21
196 197 8.637099 TCAGAGAGAAAGGTTATGTCTATCATG 58.363 37.037 0.00 0.00 37.91 3.07
197 198 8.774546 TCAGAGAGAAAGGTTATGTCTATCAT 57.225 34.615 0.00 0.00 40.25 2.45
198 199 7.201866 GCTCAGAGAGAAAGGTTATGTCTATCA 60.202 40.741 0.00 0.00 33.11 2.15
199 200 7.145323 GCTCAGAGAGAAAGGTTATGTCTATC 58.855 42.308 0.00 0.00 31.25 2.08
200 201 6.609212 TGCTCAGAGAGAAAGGTTATGTCTAT 59.391 38.462 0.00 0.00 0.00 1.98
201 202 5.952347 TGCTCAGAGAGAAAGGTTATGTCTA 59.048 40.000 0.00 0.00 0.00 2.59
202 203 4.774726 TGCTCAGAGAGAAAGGTTATGTCT 59.225 41.667 0.00 0.00 0.00 3.41
203 204 5.078411 TGCTCAGAGAGAAAGGTTATGTC 57.922 43.478 0.00 0.00 0.00 3.06
204 205 5.489792 TTGCTCAGAGAGAAAGGTTATGT 57.510 39.130 0.00 0.00 0.00 2.29
205 206 6.677431 GCATTTGCTCAGAGAGAAAGGTTATG 60.677 42.308 0.00 0.00 38.21 1.90
206 207 5.356470 GCATTTGCTCAGAGAGAAAGGTTAT 59.644 40.000 0.00 0.00 38.21 1.89
207 208 4.697352 GCATTTGCTCAGAGAGAAAGGTTA 59.303 41.667 0.00 0.00 38.21 2.85
208 209 3.505293 GCATTTGCTCAGAGAGAAAGGTT 59.495 43.478 0.00 0.00 38.21 3.50
209 210 3.080319 GCATTTGCTCAGAGAGAAAGGT 58.920 45.455 0.00 0.00 38.21 3.50
210 211 3.761311 GCATTTGCTCAGAGAGAAAGG 57.239 47.619 0.00 2.36 38.21 3.11
239 240 4.214332 GCGATTCCTGGAAAGGCTAATTAG 59.786 45.833 21.08 8.20 0.00 1.73
240 241 4.134563 GCGATTCCTGGAAAGGCTAATTA 58.865 43.478 21.08 0.00 0.00 1.40
241 242 2.952310 GCGATTCCTGGAAAGGCTAATT 59.048 45.455 21.08 1.91 0.00 1.40
242 243 2.576615 GCGATTCCTGGAAAGGCTAAT 58.423 47.619 21.08 2.57 0.00 1.73
243 244 1.408266 GGCGATTCCTGGAAAGGCTAA 60.408 52.381 24.85 0.47 0.00 3.09
244 245 0.180406 GGCGATTCCTGGAAAGGCTA 59.820 55.000 24.85 1.13 0.00 3.93
245 246 1.077429 GGCGATTCCTGGAAAGGCT 60.077 57.895 24.85 7.37 0.00 4.58
246 247 2.121538 GGGCGATTCCTGGAAAGGC 61.122 63.158 23.93 23.93 34.39 4.35
247 248 1.453928 GGGGCGATTCCTGGAAAGG 60.454 63.158 14.03 9.29 34.39 3.11
248 249 0.464554 GAGGGGCGATTCCTGGAAAG 60.465 60.000 14.03 11.61 34.21 2.62
249 250 1.607612 GAGGGGCGATTCCTGGAAA 59.392 57.895 14.03 0.00 34.21 3.13
250 251 2.375345 GGAGGGGCGATTCCTGGAA 61.375 63.158 12.26 12.26 34.21 3.53
251 252 2.768344 GGAGGGGCGATTCCTGGA 60.768 66.667 0.00 0.00 34.21 3.86
252 253 2.330924 GAAGGAGGGGCGATTCCTGG 62.331 65.000 4.16 0.00 42.95 4.45
253 254 1.147153 GAAGGAGGGGCGATTCCTG 59.853 63.158 4.16 0.00 42.95 3.86
254 255 1.003573 AGAAGGAGGGGCGATTCCT 59.996 57.895 0.00 0.00 45.65 3.36
255 256 1.448069 GAGAAGGAGGGGCGATTCC 59.552 63.158 0.00 0.00 0.00 3.01
256 257 1.448069 GGAGAAGGAGGGGCGATTC 59.552 63.158 0.00 0.00 0.00 2.52
257 258 2.073101 GGGAGAAGGAGGGGCGATT 61.073 63.158 0.00 0.00 0.00 3.34
258 259 2.446802 GGGAGAAGGAGGGGCGAT 60.447 66.667 0.00 0.00 0.00 4.58
259 260 4.005978 TGGGAGAAGGAGGGGCGA 62.006 66.667 0.00 0.00 0.00 5.54
260 261 3.787001 GTGGGAGAAGGAGGGGCG 61.787 72.222 0.00 0.00 0.00 6.13
261 262 3.412408 GGTGGGAGAAGGAGGGGC 61.412 72.222 0.00 0.00 0.00 5.80
262 263 2.692741 GGGTGGGAGAAGGAGGGG 60.693 72.222 0.00 0.00 0.00 4.79
263 264 0.846870 AAAGGGTGGGAGAAGGAGGG 60.847 60.000 0.00 0.00 0.00 4.30
264 265 0.329596 CAAAGGGTGGGAGAAGGAGG 59.670 60.000 0.00 0.00 0.00 4.30
265 266 0.322906 GCAAAGGGTGGGAGAAGGAG 60.323 60.000 0.00 0.00 0.00 3.69
266 267 0.772124 AGCAAAGGGTGGGAGAAGGA 60.772 55.000 0.00 0.00 0.00 3.36
267 268 0.113190 AAGCAAAGGGTGGGAGAAGG 59.887 55.000 0.00 0.00 0.00 3.46
268 269 1.615392 CAAAGCAAAGGGTGGGAGAAG 59.385 52.381 0.00 0.00 0.00 2.85
269 270 1.063266 ACAAAGCAAAGGGTGGGAGAA 60.063 47.619 0.00 0.00 0.00 2.87
270 271 0.555769 ACAAAGCAAAGGGTGGGAGA 59.444 50.000 0.00 0.00 0.00 3.71
271 272 2.286365 TACAAAGCAAAGGGTGGGAG 57.714 50.000 0.00 0.00 0.00 4.30
272 273 2.556559 GGATACAAAGCAAAGGGTGGGA 60.557 50.000 0.00 0.00 0.00 4.37
273 274 1.824852 GGATACAAAGCAAAGGGTGGG 59.175 52.381 0.00 0.00 0.00 4.61
274 275 2.807676 AGGATACAAAGCAAAGGGTGG 58.192 47.619 0.00 0.00 41.41 4.61
275 276 4.871933 AAAGGATACAAAGCAAAGGGTG 57.128 40.909 0.00 0.00 41.41 4.61
276 277 5.365314 TGAAAAAGGATACAAAGCAAAGGGT 59.635 36.000 0.00 0.00 41.41 4.34
277 278 5.852827 TGAAAAAGGATACAAAGCAAAGGG 58.147 37.500 0.00 0.00 41.41 3.95
293 294 2.229784 GCCATCACCAGACCTGAAAAAG 59.770 50.000 0.00 0.00 0.00 2.27
294 295 2.238521 GCCATCACCAGACCTGAAAAA 58.761 47.619 0.00 0.00 0.00 1.94
295 296 1.547675 GGCCATCACCAGACCTGAAAA 60.548 52.381 0.00 0.00 0.00 2.29
296 297 0.038166 GGCCATCACCAGACCTGAAA 59.962 55.000 0.00 0.00 0.00 2.69
297 298 0.842030 AGGCCATCACCAGACCTGAA 60.842 55.000 5.01 0.00 0.00 3.02
298 299 1.229625 AGGCCATCACCAGACCTGA 60.230 57.895 5.01 0.00 0.00 3.86
299 300 1.077930 CAGGCCATCACCAGACCTG 60.078 63.158 5.01 0.00 41.78 4.00
300 301 2.976490 GCAGGCCATCACCAGACCT 61.976 63.158 5.01 0.00 0.00 3.85
301 302 2.439156 GCAGGCCATCACCAGACC 60.439 66.667 5.01 0.00 0.00 3.85
302 303 1.748122 CAGCAGGCCATCACCAGAC 60.748 63.158 5.01 0.00 0.00 3.51
303 304 2.672908 CAGCAGGCCATCACCAGA 59.327 61.111 5.01 0.00 0.00 3.86
304 305 3.138798 GCAGCAGGCCATCACCAG 61.139 66.667 5.01 0.00 36.11 4.00
305 306 3.969119 TGCAGCAGGCCATCACCA 61.969 61.111 5.01 0.00 43.89 4.17
306 307 3.446570 GTGCAGCAGGCCATCACC 61.447 66.667 5.01 0.00 43.89 4.02
307 308 2.674033 TGTGCAGCAGGCCATCAC 60.674 61.111 5.01 5.72 43.89 3.06
308 309 2.674033 GTGTGCAGCAGGCCATCA 60.674 61.111 5.01 0.00 43.89 3.07
309 310 1.601419 ATTGTGTGCAGCAGGCCATC 61.601 55.000 5.01 0.00 43.89 3.51
310 311 1.608336 ATTGTGTGCAGCAGGCCAT 60.608 52.632 5.01 0.00 43.89 4.40
311 312 2.203523 ATTGTGTGCAGCAGGCCA 60.204 55.556 5.01 0.00 43.89 5.36
312 313 2.260434 CATTGTGTGCAGCAGGCC 59.740 61.111 0.00 0.00 43.89 5.19
313 314 1.372499 CACATTGTGTGCAGCAGGC 60.372 57.895 8.69 0.00 41.89 4.85
314 315 4.957266 CACATTGTGTGCAGCAGG 57.043 55.556 8.69 0.00 41.89 4.85
321 322 7.320871 TGATGTTATCACCGCACATTGTGTG 62.321 44.000 20.83 20.83 41.85 3.82
322 323 2.499197 TGTTATCACCGCACATTGTGT 58.501 42.857 17.64 0.00 35.75 3.72
323 324 3.126686 TGATGTTATCACCGCACATTGTG 59.873 43.478 12.54 12.54 33.59 3.33
324 325 3.342719 TGATGTTATCACCGCACATTGT 58.657 40.909 0.00 0.00 33.59 2.71
334 335 8.892723 TCATTTACATGAAGGTGATGTTATCAC 58.107 33.333 12.33 12.33 45.77 3.06
335 336 8.892723 GTCATTTACATGAAGGTGATGTTATCA 58.107 33.333 0.00 0.00 41.30 2.15
336 337 9.113838 AGTCATTTACATGAAGGTGATGTTATC 57.886 33.333 0.00 0.00 41.30 1.75
337 338 9.113838 GAGTCATTTACATGAAGGTGATGTTAT 57.886 33.333 0.00 0.00 41.30 1.89
338 339 7.552687 GGAGTCATTTACATGAAGGTGATGTTA 59.447 37.037 0.00 0.00 41.30 2.41
339 340 6.375455 GGAGTCATTTACATGAAGGTGATGTT 59.625 38.462 0.00 0.00 41.30 2.71
340 341 5.882557 GGAGTCATTTACATGAAGGTGATGT 59.117 40.000 0.00 0.00 41.30 3.06
341 342 5.007039 CGGAGTCATTTACATGAAGGTGATG 59.993 44.000 0.00 0.00 41.30 3.07
342 343 5.118990 CGGAGTCATTTACATGAAGGTGAT 58.881 41.667 0.00 0.00 41.30 3.06
343 344 4.503910 CGGAGTCATTTACATGAAGGTGA 58.496 43.478 0.00 0.00 41.30 4.02
344 345 3.623060 CCGGAGTCATTTACATGAAGGTG 59.377 47.826 0.00 0.00 41.30 4.00
345 346 3.263425 ACCGGAGTCATTTACATGAAGGT 59.737 43.478 9.46 0.00 41.30 3.50
346 347 3.871594 GACCGGAGTCATTTACATGAAGG 59.128 47.826 9.46 0.00 41.30 3.46
392 393 9.971922 GGTAGAGCATTTTCTATTTATGCATTT 57.028 29.630 3.54 0.00 45.39 2.32
393 394 9.359653 AGGTAGAGCATTTTCTATTTATGCATT 57.640 29.630 3.54 0.00 45.39 3.56
394 395 8.930846 AGGTAGAGCATTTTCTATTTATGCAT 57.069 30.769 3.79 3.79 45.39 3.96
395 396 8.752005 AAGGTAGAGCATTTTCTATTTATGCA 57.248 30.769 8.75 0.00 45.39 3.96
432 433 9.927668 CTAGTGAATCCCATTGTAAACATTTTT 57.072 29.630 0.00 0.00 0.00 1.94
433 434 8.531146 CCTAGTGAATCCCATTGTAAACATTTT 58.469 33.333 0.00 0.00 0.00 1.82
434 435 7.893302 TCCTAGTGAATCCCATTGTAAACATTT 59.107 33.333 0.00 0.00 0.00 2.32
435 436 7.339466 GTCCTAGTGAATCCCATTGTAAACATT 59.661 37.037 0.00 0.00 0.00 2.71
460 461 2.186903 CGGCTATCCAACGCCAGT 59.813 61.111 0.00 0.00 46.62 4.00
533 534 5.302568 TGATATCCCTGCATGTTGGATTTTC 59.697 40.000 15.06 13.04 39.55 2.29
587 588 2.560981 TGCGATCACAAGTACCTTGAGA 59.439 45.455 10.73 8.52 43.42 3.27
622 646 5.605564 TCGTGCCATGTTATATACAATGC 57.394 39.130 0.00 0.00 40.89 3.56
627 651 6.183360 CCATCCATTCGTGCCATGTTATATAC 60.183 42.308 0.00 0.00 0.00 1.47
797 832 1.071699 GGTGGGTAGTCTGTTTCTGCA 59.928 52.381 0.00 0.00 0.00 4.41
798 833 1.348036 AGGTGGGTAGTCTGTTTCTGC 59.652 52.381 0.00 0.00 0.00 4.26
799 834 2.872038 GCAGGTGGGTAGTCTGTTTCTG 60.872 54.545 0.00 0.00 0.00 3.02
858 894 0.393402 TGGGCTAGAGTTGCATGCAG 60.393 55.000 21.50 9.28 0.00 4.41
878 914 4.202461 GGGGCACAGTAAGATGGATGATTA 60.202 45.833 0.00 0.00 0.00 1.75
970 1011 2.353903 GGATCACACCAATGCAATGCAA 60.354 45.455 13.45 0.00 43.62 4.08
1097 1138 5.755375 TGCATGCAAAGAGATTAGTAGTAGC 59.245 40.000 20.30 0.00 0.00 3.58
1167 1214 3.061093 CTGTCGATCAGCAGTGCAT 57.939 52.632 19.20 2.16 37.36 3.96
1205 1252 1.202428 TGCGCATATGCATTGCAATGT 60.202 42.857 33.67 21.12 43.62 2.71
1251 1310 2.536997 ATTACCTGACGCTGCCCCAC 62.537 60.000 0.00 0.00 0.00 4.61
1578 1637 0.675837 GGAAAGGGGTAGTGCGGTTC 60.676 60.000 0.00 0.00 0.00 3.62
1579 1638 1.377612 GGAAAGGGGTAGTGCGGTT 59.622 57.895 0.00 0.00 0.00 4.44
1583 1642 1.376812 CGTGGGAAAGGGGTAGTGC 60.377 63.158 0.00 0.00 0.00 4.40
1655 1714 2.258591 GCTTGCCTCTCGACGTCA 59.741 61.111 17.16 1.87 0.00 4.35
1751 1810 2.827190 TAGATCTCGCCGTGCCGT 60.827 61.111 0.00 0.00 0.00 5.68
2039 2098 4.864334 ATACCAGCTGCTGCCGCC 62.864 66.667 23.86 0.00 40.80 6.13
2041 2100 1.886313 CTCATACCAGCTGCTGCCG 60.886 63.158 23.86 13.70 40.80 5.69
2042 2101 0.465705 TACTCATACCAGCTGCTGCC 59.534 55.000 23.86 0.00 40.80 4.85
2043 2102 2.141517 CATACTCATACCAGCTGCTGC 58.858 52.381 23.86 7.62 40.05 5.25
2044 2103 3.740631 TCATACTCATACCAGCTGCTG 57.259 47.619 22.44 22.44 0.00 4.41
2086 2145 1.154836 GTCGCGCTGTCTTTGAACG 60.155 57.895 5.56 0.00 0.00 3.95
2108 2167 2.932614 CAGTCTGCCGTAGAAATCTTGG 59.067 50.000 0.00 0.00 37.12 3.61
2111 2170 2.166664 GGTCAGTCTGCCGTAGAAATCT 59.833 50.000 0.00 0.00 37.12 2.40
2114 2173 0.242825 CGGTCAGTCTGCCGTAGAAA 59.757 55.000 20.80 0.00 42.73 2.52
2450 2509 2.925170 AACCGCAGCCTCCTCACT 60.925 61.111 0.00 0.00 0.00 3.41
2455 2514 2.281484 TGTTGAACCGCAGCCTCC 60.281 61.111 0.00 0.00 0.00 4.30
2474 2533 3.941188 AGCACCACCTCCACCGTG 61.941 66.667 0.00 0.00 0.00 4.94
2516 2575 4.680237 TGCAGCGGGTGGTTCTCG 62.680 66.667 9.49 0.00 43.80 4.04
2699 2758 2.282391 TGGCAGTGCATGACCCAC 60.282 61.111 18.61 0.00 35.23 4.61
3011 3122 9.863650 TGCTAGTACCTTAGAAATCAGTACTAT 57.136 33.333 8.36 0.00 42.52 2.12
3012 3123 9.118300 GTGCTAGTACCTTAGAAATCAGTACTA 57.882 37.037 0.00 7.80 42.59 1.82
3013 3124 7.614583 TGTGCTAGTACCTTAGAAATCAGTACT 59.385 37.037 8.60 6.40 44.29 2.73
3014 3125 7.769220 TGTGCTAGTACCTTAGAAATCAGTAC 58.231 38.462 8.60 0.00 34.79 2.73
3015 3126 7.949690 TGTGCTAGTACCTTAGAAATCAGTA 57.050 36.000 8.60 0.00 0.00 2.74
3016 3127 6.852420 TGTGCTAGTACCTTAGAAATCAGT 57.148 37.500 8.60 0.00 0.00 3.41
3046 3157 8.429237 TTTCTCTCCATTTATTGGCCTTAAAA 57.571 30.769 3.32 1.55 46.01 1.52
3122 3233 9.386010 AGTCAAACTCTGAGTACTACTACTATG 57.614 37.037 11.30 0.00 35.84 2.23
3172 3284 3.651423 ACCTGATATGTAAAGGTAGGGGC 59.349 47.826 0.00 0.00 42.59 5.80
3233 4898 3.084039 CTGTCTTAGCTTTGGATTGCCA 58.916 45.455 0.00 0.00 44.17 4.92
3282 4949 4.346970 TCATTAGTTTTTGTGTGTGTGCG 58.653 39.130 0.00 0.00 0.00 5.34
3283 4950 6.639671 TTTCATTAGTTTTTGTGTGTGTGC 57.360 33.333 0.00 0.00 0.00 4.57
3284 4951 8.183830 ACATTTCATTAGTTTTTGTGTGTGTG 57.816 30.769 0.00 0.00 0.00 3.82
3307 4978 6.486657 GCTCTGGGTTGCTTGATTATTATACA 59.513 38.462 0.00 0.00 0.00 2.29
3356 5075 4.963318 TTCTCATCTGGTGAAACTGAGT 57.037 40.909 0.00 0.00 36.14 3.41
3388 5107 3.753193 GCAGCTTATGGGAGAAATGGGAT 60.753 47.826 0.00 0.00 0.00 3.85
3429 5148 2.990066 CCACCTCATGGTTAGAGTCC 57.010 55.000 0.00 0.00 46.05 3.85
3440 5159 1.561542 CTACTTGGAAGGCCACCTCAT 59.438 52.381 17.68 7.36 45.94 2.90
3442 5161 1.276622 TCTACTTGGAAGGCCACCTC 58.723 55.000 17.68 5.85 45.94 3.85
3445 5164 3.339141 CTTCTTCTACTTGGAAGGCCAC 58.661 50.000 5.01 0.00 45.94 5.01
3450 5169 3.703001 TGCCCTTCTTCTACTTGGAAG 57.297 47.619 0.00 0.00 42.72 3.46
3454 5173 2.076863 CGGTTGCCCTTCTTCTACTTG 58.923 52.381 0.00 0.00 0.00 3.16
3457 5176 1.025113 GCCGGTTGCCCTTCTTCTAC 61.025 60.000 1.90 0.00 0.00 2.59
3472 5194 4.176752 GCTCCTACCCTTGGCCGG 62.177 72.222 0.00 0.00 0.00 6.13
3478 5200 0.545309 TGTGCTCTGCTCCTACCCTT 60.545 55.000 0.00 0.00 0.00 3.95
3480 5202 0.972983 TCTGTGCTCTGCTCCTACCC 60.973 60.000 0.00 0.00 0.00 3.69
3495 5217 1.277557 CTTGCTGCTCCTTACCTCTGT 59.722 52.381 0.00 0.00 0.00 3.41
3518 5241 3.193263 CCGATCTCAACCTGAATCTGTG 58.807 50.000 0.00 0.00 0.00 3.66
3537 5260 2.409870 GCATTTGTCCCCTCTGCCG 61.410 63.158 0.00 0.00 0.00 5.69
3551 5274 6.518493 ACATTGAGACACTTCAAATTGCATT 58.482 32.000 0.00 0.00 40.21 3.56
3555 5278 5.628193 GCAGACATTGAGACACTTCAAATTG 59.372 40.000 0.00 0.00 40.21 2.32
3559 5282 4.077300 AGCAGACATTGAGACACTTCAA 57.923 40.909 0.00 0.00 41.00 2.69
3591 5314 2.882137 TGCAAACTAAAAAGGACCGGAG 59.118 45.455 9.46 0.00 0.00 4.63
3592 5315 2.933573 TGCAAACTAAAAAGGACCGGA 58.066 42.857 9.46 0.00 0.00 5.14
3593 5316 3.934457 ATGCAAACTAAAAAGGACCGG 57.066 42.857 0.00 0.00 0.00 5.28
3594 5317 7.981142 TCTTATATGCAAACTAAAAAGGACCG 58.019 34.615 0.00 0.00 0.00 4.79
3625 5348 9.925268 GTCAAACTTTACGAGATTTAACTTCAA 57.075 29.630 0.00 0.00 0.00 2.69
3626 5349 8.553696 GGTCAAACTTTACGAGATTTAACTTCA 58.446 33.333 0.00 0.00 0.00 3.02
3627 5350 8.553696 TGGTCAAACTTTACGAGATTTAACTTC 58.446 33.333 0.00 0.00 0.00 3.01
3628 5351 8.441312 TGGTCAAACTTTACGAGATTTAACTT 57.559 30.769 0.00 0.00 0.00 2.66
3629 5352 8.340443 GTTGGTCAAACTTTACGAGATTTAACT 58.660 33.333 0.00 0.00 35.75 2.24
3630 5353 8.485050 GTTGGTCAAACTTTACGAGATTTAAC 57.515 34.615 0.00 0.00 35.75 2.01
3679 5402 9.398538 TCTAATGATCATGATTTCACATTGTGA 57.601 29.630 21.76 15.41 41.09 3.58
3682 5405 9.129209 GCATCTAATGATCATGATTTCACATTG 57.871 33.333 21.76 14.88 31.85 2.82
3683 5406 8.021396 CGCATCTAATGATCATGATTTCACATT 58.979 33.333 18.83 18.83 33.56 2.71
3684 5407 7.174426 ACGCATCTAATGATCATGATTTCACAT 59.826 33.333 9.46 5.74 0.00 3.21
3685 5408 6.484308 ACGCATCTAATGATCATGATTTCACA 59.516 34.615 9.46 3.36 0.00 3.58
3686 5409 6.895898 ACGCATCTAATGATCATGATTTCAC 58.104 36.000 9.46 0.00 0.00 3.18
3687 5410 7.012610 ACAACGCATCTAATGATCATGATTTCA 59.987 33.333 9.46 5.50 0.00 2.69
3688 5411 7.322938 CACAACGCATCTAATGATCATGATTTC 59.677 37.037 9.46 0.00 0.00 2.17
3689 5412 7.012610 TCACAACGCATCTAATGATCATGATTT 59.987 33.333 9.46 3.72 0.00 2.17
3690 5413 6.484308 TCACAACGCATCTAATGATCATGATT 59.516 34.615 9.46 0.00 0.00 2.57
3691 5414 5.993441 TCACAACGCATCTAATGATCATGAT 59.007 36.000 8.25 8.25 0.00 2.45
3692 5415 5.234972 GTCACAACGCATCTAATGATCATGA 59.765 40.000 9.46 3.40 0.00 3.07
3693 5416 5.235831 AGTCACAACGCATCTAATGATCATG 59.764 40.000 9.46 0.00 0.00 3.07
3694 5417 5.363101 AGTCACAACGCATCTAATGATCAT 58.637 37.500 1.18 1.18 0.00 2.45
3695 5418 4.758688 AGTCACAACGCATCTAATGATCA 58.241 39.130 0.00 0.00 0.00 2.92
3696 5419 5.725110 AAGTCACAACGCATCTAATGATC 57.275 39.130 0.00 0.00 0.00 2.92
3697 5420 7.609760 TTTAAGTCACAACGCATCTAATGAT 57.390 32.000 0.00 0.00 0.00 2.45
3698 5421 7.609760 ATTTAAGTCACAACGCATCTAATGA 57.390 32.000 0.00 0.00 0.00 2.57
3699 5422 8.673626 AAATTTAAGTCACAACGCATCTAATG 57.326 30.769 0.00 0.00 0.00 1.90
3700 5423 9.691362 AAAAATTTAAGTCACAACGCATCTAAT 57.309 25.926 0.00 0.00 0.00 1.73
3701 5424 8.963130 CAAAAATTTAAGTCACAACGCATCTAA 58.037 29.630 0.00 0.00 0.00 2.10
3702 5425 8.132362 ACAAAAATTTAAGTCACAACGCATCTA 58.868 29.630 0.00 0.00 0.00 1.98
3703 5426 6.978080 ACAAAAATTTAAGTCACAACGCATCT 59.022 30.769 0.00 0.00 0.00 2.90
3704 5427 7.160633 ACAAAAATTTAAGTCACAACGCATC 57.839 32.000 0.00 0.00 0.00 3.91
3705 5428 8.810652 ATACAAAAATTTAAGTCACAACGCAT 57.189 26.923 0.00 0.00 0.00 4.73
3706 5429 8.535592 CAATACAAAAATTTAAGTCACAACGCA 58.464 29.630 0.00 0.00 0.00 5.24
3707 5430 8.536407 ACAATACAAAAATTTAAGTCACAACGC 58.464 29.630 0.00 0.00 0.00 4.84
3785 5508 9.956720 AATCATCTGAAGTCAAACTTTGTAAAG 57.043 29.630 2.94 2.94 38.80 1.85
3786 5509 9.950680 GAATCATCTGAAGTCAAACTTTGTAAA 57.049 29.630 1.44 0.00 38.80 2.01
3787 5510 9.342308 AGAATCATCTGAAGTCAAACTTTGTAA 57.658 29.630 1.44 0.00 38.80 2.41
3788 5511 8.908786 AGAATCATCTGAAGTCAAACTTTGTA 57.091 30.769 1.44 0.00 38.80 2.41
3789 5512 7.814264 AGAATCATCTGAAGTCAAACTTTGT 57.186 32.000 1.44 0.00 38.80 2.83
3794 5517 9.875675 GCATATAAGAATCATCTGAAGTCAAAC 57.124 33.333 0.00 0.00 35.59 2.93
3795 5518 9.617523 TGCATATAAGAATCATCTGAAGTCAAA 57.382 29.630 0.00 0.00 35.59 2.69
3796 5519 9.269453 CTGCATATAAGAATCATCTGAAGTCAA 57.731 33.333 0.00 0.00 35.59 3.18
3797 5520 8.645110 TCTGCATATAAGAATCATCTGAAGTCA 58.355 33.333 0.00 0.00 35.59 3.41
3798 5521 9.142515 CTCTGCATATAAGAATCATCTGAAGTC 57.857 37.037 0.00 0.00 35.59 3.01
3799 5522 8.649591 ACTCTGCATATAAGAATCATCTGAAGT 58.350 33.333 0.00 0.00 35.59 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.