Multiple sequence alignment - TraesCS2D01G264400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G264400 chr2D 100.000 2714 0 0 1 2714 323518056 323515343 0.000000e+00 5012.0
1 TraesCS2D01G264400 chr2D 89.091 935 79 11 848 1776 73592304 73591387 0.000000e+00 1140.0
2 TraesCS2D01G264400 chr2D 86.515 1053 94 28 739 1762 73820373 73819340 0.000000e+00 1114.0
3 TraesCS2D01G264400 chr2D 89.674 736 64 8 983 1715 323561355 323562081 0.000000e+00 928.0
4 TraesCS2D01G264400 chr2D 96.825 189 6 0 557 745 573905456 573905268 1.570000e-82 316.0
5 TraesCS2D01G264400 chr2A 95.446 1054 37 7 738 1782 406996676 406997727 0.000000e+00 1670.0
6 TraesCS2D01G264400 chr2A 95.351 1054 36 8 738 1782 407125175 407126224 0.000000e+00 1663.0
7 TraesCS2D01G264400 chr2A 88.103 891 82 16 853 1728 73183549 73182668 0.000000e+00 1037.0
8 TraesCS2D01G264400 chr2A 86.279 962 87 20 825 1776 73179984 73179058 0.000000e+00 1003.0
9 TraesCS2D01G264400 chr2A 89.751 722 66 3 996 1715 406964297 406963582 0.000000e+00 917.0
10 TraesCS2D01G264400 chr2A 89.751 722 66 3 996 1715 407092473 407091758 0.000000e+00 917.0
11 TraesCS2D01G264400 chr2A 88.109 513 51 3 1813 2315 407126315 407126827 3.870000e-168 601.0
12 TraesCS2D01G264400 chr2A 87.914 513 52 3 1813 2315 406997818 406998330 1.800000e-166 595.0
13 TraesCS2D01G264400 chr2A 93.085 376 25 1 2313 2688 407130774 407131148 1.420000e-152 549.0
14 TraesCS2D01G264400 chr2A 92.021 376 29 1 2313 2688 407002503 407002877 6.660000e-146 527.0
15 TraesCS2D01G264400 chr2A 94.444 72 4 0 491 562 406996614 406996685 7.940000e-21 111.0
16 TraesCS2D01G264400 chr2A 94.444 72 4 0 491 562 407125113 407125184 7.940000e-21 111.0
17 TraesCS2D01G264400 chr2B 85.804 1113 103 36 739 1815 111669684 111668591 0.000000e+00 1129.0
18 TraesCS2D01G264400 chr2B 80.960 1250 134 49 1295 2519 391493438 391492268 0.000000e+00 894.0
19 TraesCS2D01G264400 chr2B 90.909 561 39 8 738 1297 391496079 391495530 0.000000e+00 743.0
20 TraesCS2D01G264400 chr2B 85.388 219 14 4 344 562 391496270 391496070 7.610000e-51 211.0
21 TraesCS2D01G264400 chr2B 84.422 199 29 2 53 249 391506526 391506328 7.670000e-46 195.0
22 TraesCS2D01G264400 chr7D 97.765 179 3 1 558 736 616769167 616769344 9.440000e-80 307.0
23 TraesCS2D01G264400 chr6D 97.765 179 3 1 557 735 54493626 54493449 9.440000e-80 307.0
24 TraesCS2D01G264400 chr6D 100.000 29 0 0 2686 2714 181972111 181972139 1.000000e-03 54.7
25 TraesCS2D01G264400 chr3A 95.789 190 8 0 554 743 645761103 645760914 9.440000e-80 307.0
26 TraesCS2D01G264400 chr4A 94.059 202 9 3 549 749 595978674 595978475 1.220000e-78 303.0
27 TraesCS2D01G264400 chr7B 95.745 188 6 2 554 740 741935039 741934853 4.390000e-78 302.0
28 TraesCS2D01G264400 chr5D 96.648 179 6 0 563 741 393059879 393059701 5.680000e-77 298.0
29 TraesCS2D01G264400 chr1A 93.434 198 10 3 550 747 354935852 354935658 9.510000e-75 291.0
30 TraesCS2D01G264400 chr6A 89.954 219 18 4 554 771 540314854 540315069 2.060000e-71 279.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G264400 chr2D 323515343 323518056 2713 True 5012 5012 100.000000 1 2714 1 chr2D.!!$R3 2713
1 TraesCS2D01G264400 chr2D 73591387 73592304 917 True 1140 1140 89.091000 848 1776 1 chr2D.!!$R1 928
2 TraesCS2D01G264400 chr2D 73819340 73820373 1033 True 1114 1114 86.515000 739 1762 1 chr2D.!!$R2 1023
3 TraesCS2D01G264400 chr2D 323561355 323562081 726 False 928 928 89.674000 983 1715 1 chr2D.!!$F1 732
4 TraesCS2D01G264400 chr2A 73179058 73183549 4491 True 1020 1037 87.191000 825 1776 2 chr2A.!!$R3 951
5 TraesCS2D01G264400 chr2A 406963582 406964297 715 True 917 917 89.751000 996 1715 1 chr2A.!!$R1 719
6 TraesCS2D01G264400 chr2A 407091758 407092473 715 True 917 917 89.751000 996 1715 1 chr2A.!!$R2 719
7 TraesCS2D01G264400 chr2A 406996614 406998330 1716 False 792 1670 92.601333 491 2315 3 chr2A.!!$F2 1824
8 TraesCS2D01G264400 chr2A 407125113 407131148 6035 False 731 1663 92.747250 491 2688 4 chr2A.!!$F3 2197
9 TraesCS2D01G264400 chr2B 111668591 111669684 1093 True 1129 1129 85.804000 739 1815 1 chr2B.!!$R1 1076
10 TraesCS2D01G264400 chr2B 391492268 391496270 4002 True 616 894 85.752333 344 2519 3 chr2B.!!$R3 2175

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.036875 ACTGCAAGAAGGCCAGGTAC 59.963 55.0 5.01 0.0 37.43 3.34 F
286 287 0.037697 ACGTTCATTCGCAGCACCTA 60.038 50.0 0.00 0.0 0.00 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1693 7420 1.302033 ACACGGCCTTGAGCTTCTG 60.302 57.895 17.43 0.00 43.05 3.02 R
2212 8015 1.122019 GGGATGATGACGCCTAGGGT 61.122 60.000 11.72 6.76 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.944376 ATTCTAACTTGTCTTATACTGCAAGAA 57.056 29.630 9.68 0.00 40.30 2.52
36 37 8.988064 TCTAACTTGTCTTATACTGCAAGAAG 57.012 34.615 9.68 6.92 40.30 2.85
37 38 8.035394 TCTAACTTGTCTTATACTGCAAGAAGG 58.965 37.037 9.68 0.88 40.30 3.46
38 39 4.938226 ACTTGTCTTATACTGCAAGAAGGC 59.062 41.667 9.68 0.00 40.30 4.35
39 40 3.873910 TGTCTTATACTGCAAGAAGGCC 58.126 45.455 0.00 0.00 37.43 5.19
40 41 3.263170 TGTCTTATACTGCAAGAAGGCCA 59.737 43.478 5.01 0.00 37.43 5.36
41 42 3.873952 GTCTTATACTGCAAGAAGGCCAG 59.126 47.826 5.01 0.00 37.43 4.85
42 43 3.118261 TCTTATACTGCAAGAAGGCCAGG 60.118 47.826 5.01 0.00 37.43 4.45
43 44 0.995024 ATACTGCAAGAAGGCCAGGT 59.005 50.000 5.01 0.00 37.43 4.00
44 45 1.651737 TACTGCAAGAAGGCCAGGTA 58.348 50.000 5.01 0.00 37.43 3.08
45 46 0.036875 ACTGCAAGAAGGCCAGGTAC 59.963 55.000 5.01 0.00 37.43 3.34
46 47 0.326264 CTGCAAGAAGGCCAGGTACT 59.674 55.000 5.01 0.00 34.30 2.73
47 48 0.324943 TGCAAGAAGGCCAGGTACTC 59.675 55.000 5.01 0.00 34.60 2.59
48 49 0.393132 GCAAGAAGGCCAGGTACTCC 60.393 60.000 5.01 0.00 34.60 3.85
49 50 1.280457 CAAGAAGGCCAGGTACTCCT 58.720 55.000 5.01 0.00 46.37 3.69
50 51 2.467880 CAAGAAGGCCAGGTACTCCTA 58.532 52.381 5.01 0.00 43.07 2.94
51 52 2.162264 AGAAGGCCAGGTACTCCTAC 57.838 55.000 5.01 0.00 43.07 3.18
52 53 1.361543 AGAAGGCCAGGTACTCCTACA 59.638 52.381 5.01 0.00 43.07 2.74
53 54 2.022918 AGAAGGCCAGGTACTCCTACAT 60.023 50.000 5.01 0.00 43.07 2.29
54 55 3.206866 AGAAGGCCAGGTACTCCTACATA 59.793 47.826 5.01 0.00 43.07 2.29
55 56 3.925261 AGGCCAGGTACTCCTACATAT 57.075 47.619 5.01 0.00 43.07 1.78
56 57 5.076039 AGAAGGCCAGGTACTCCTACATATA 59.924 44.000 5.01 0.00 43.07 0.86
57 58 5.554034 AGGCCAGGTACTCCTACATATAT 57.446 43.478 5.01 0.00 43.07 0.86
58 59 6.669736 AGGCCAGGTACTCCTACATATATA 57.330 41.667 5.01 0.00 43.07 0.86
59 60 7.240390 AGGCCAGGTACTCCTACATATATAT 57.760 40.000 5.01 0.00 43.07 0.86
60 61 8.359404 AGGCCAGGTACTCCTACATATATATA 57.641 38.462 5.01 0.00 43.07 0.86
61 62 8.226112 AGGCCAGGTACTCCTACATATATATAC 58.774 40.741 5.01 0.00 43.07 1.47
62 63 7.450944 GGCCAGGTACTCCTACATATATATACC 59.549 44.444 0.00 0.00 43.07 2.73
63 64 7.450944 GCCAGGTACTCCTACATATATATACCC 59.549 44.444 0.00 0.00 43.07 3.69
64 65 8.508601 CCAGGTACTCCTACATATATATACCCA 58.491 40.741 0.00 0.00 43.07 4.51
84 85 6.469782 CCCATTAGGTTCAAGCAATACATT 57.530 37.500 0.00 0.00 0.00 2.71
85 86 7.581213 CCCATTAGGTTCAAGCAATACATTA 57.419 36.000 0.00 0.00 0.00 1.90
86 87 8.006298 CCCATTAGGTTCAAGCAATACATTAA 57.994 34.615 0.00 0.00 0.00 1.40
87 88 7.920682 CCCATTAGGTTCAAGCAATACATTAAC 59.079 37.037 0.00 0.00 0.00 2.01
88 89 8.465999 CCATTAGGTTCAAGCAATACATTAACA 58.534 33.333 0.00 0.00 0.00 2.41
89 90 9.853555 CATTAGGTTCAAGCAATACATTAACAA 57.146 29.630 0.00 0.00 0.00 2.83
93 94 8.466798 AGGTTCAAGCAATACATTAACAATACC 58.533 33.333 0.00 0.00 0.00 2.73
94 95 8.247562 GGTTCAAGCAATACATTAACAATACCA 58.752 33.333 0.00 0.00 0.00 3.25
95 96 9.072294 GTTCAAGCAATACATTAACAATACCAC 57.928 33.333 0.00 0.00 0.00 4.16
96 97 8.341892 TCAAGCAATACATTAACAATACCACA 57.658 30.769 0.00 0.00 0.00 4.17
97 98 8.797438 TCAAGCAATACATTAACAATACCACAA 58.203 29.630 0.00 0.00 0.00 3.33
98 99 9.416794 CAAGCAATACATTAACAATACCACAAA 57.583 29.630 0.00 0.00 0.00 2.83
100 101 9.801873 AGCAATACATTAACAATACCACAAATC 57.198 29.630 0.00 0.00 0.00 2.17
101 102 9.030301 GCAATACATTAACAATACCACAAATCC 57.970 33.333 0.00 0.00 0.00 3.01
102 103 9.528018 CAATACATTAACAATACCACAAATCCC 57.472 33.333 0.00 0.00 0.00 3.85
103 104 9.487442 AATACATTAACAATACCACAAATCCCT 57.513 29.630 0.00 0.00 0.00 4.20
104 105 7.404671 ACATTAACAATACCACAAATCCCTC 57.595 36.000 0.00 0.00 0.00 4.30
105 106 7.182060 ACATTAACAATACCACAAATCCCTCT 58.818 34.615 0.00 0.00 0.00 3.69
106 107 7.339466 ACATTAACAATACCACAAATCCCTCTC 59.661 37.037 0.00 0.00 0.00 3.20
107 108 5.520748 AACAATACCACAAATCCCTCTCT 57.479 39.130 0.00 0.00 0.00 3.10
108 109 6.636454 AACAATACCACAAATCCCTCTCTA 57.364 37.500 0.00 0.00 0.00 2.43
109 110 6.831664 ACAATACCACAAATCCCTCTCTAT 57.168 37.500 0.00 0.00 0.00 1.98
110 111 7.213178 ACAATACCACAAATCCCTCTCTATT 57.787 36.000 0.00 0.00 0.00 1.73
111 112 7.283329 ACAATACCACAAATCCCTCTCTATTC 58.717 38.462 0.00 0.00 0.00 1.75
112 113 7.127955 ACAATACCACAAATCCCTCTCTATTCT 59.872 37.037 0.00 0.00 0.00 2.40
113 114 5.622346 ACCACAAATCCCTCTCTATTCTC 57.378 43.478 0.00 0.00 0.00 2.87
114 115 5.284582 ACCACAAATCCCTCTCTATTCTCT 58.715 41.667 0.00 0.00 0.00 3.10
115 116 5.728741 ACCACAAATCCCTCTCTATTCTCTT 59.271 40.000 0.00 0.00 0.00 2.85
116 117 6.054295 CCACAAATCCCTCTCTATTCTCTTG 58.946 44.000 0.00 0.00 0.00 3.02
117 118 5.526846 CACAAATCCCTCTCTATTCTCTTGC 59.473 44.000 0.00 0.00 0.00 4.01
118 119 4.972751 AATCCCTCTCTATTCTCTTGCC 57.027 45.455 0.00 0.00 0.00 4.52
119 120 2.311463 TCCCTCTCTATTCTCTTGCCG 58.689 52.381 0.00 0.00 0.00 5.69
120 121 1.342819 CCCTCTCTATTCTCTTGCCGG 59.657 57.143 0.00 0.00 0.00 6.13
121 122 1.270041 CCTCTCTATTCTCTTGCCGGC 60.270 57.143 22.73 22.73 0.00 6.13
122 123 1.410517 CTCTCTATTCTCTTGCCGGCA 59.589 52.381 29.03 29.03 0.00 5.69
123 124 1.137086 TCTCTATTCTCTTGCCGGCAC 59.863 52.381 32.95 0.00 0.00 5.01
137 138 3.735181 GGCACGTAGGTCAAGTAGG 57.265 57.895 0.00 0.00 0.00 3.18
138 139 1.180029 GGCACGTAGGTCAAGTAGGA 58.820 55.000 0.00 0.00 0.00 2.94
139 140 1.134560 GGCACGTAGGTCAAGTAGGAG 59.865 57.143 0.00 0.00 0.00 3.69
140 141 1.817447 GCACGTAGGTCAAGTAGGAGT 59.183 52.381 0.00 0.00 0.00 3.85
141 142 3.012518 GCACGTAGGTCAAGTAGGAGTA 58.987 50.000 0.00 0.00 0.00 2.59
142 143 3.065095 GCACGTAGGTCAAGTAGGAGTAG 59.935 52.174 0.00 0.00 0.00 2.57
143 144 4.511527 CACGTAGGTCAAGTAGGAGTAGA 58.488 47.826 0.00 0.00 0.00 2.59
144 145 4.940046 CACGTAGGTCAAGTAGGAGTAGAA 59.060 45.833 0.00 0.00 0.00 2.10
145 146 5.589452 CACGTAGGTCAAGTAGGAGTAGAAT 59.411 44.000 0.00 0.00 0.00 2.40
146 147 5.589452 ACGTAGGTCAAGTAGGAGTAGAATG 59.411 44.000 0.00 0.00 0.00 2.67
147 148 5.505985 CGTAGGTCAAGTAGGAGTAGAATGC 60.506 48.000 0.00 0.00 0.00 3.56
148 149 4.353777 AGGTCAAGTAGGAGTAGAATGCA 58.646 43.478 0.00 0.00 0.00 3.96
149 150 4.160626 AGGTCAAGTAGGAGTAGAATGCAC 59.839 45.833 0.00 0.00 0.00 4.57
150 151 4.434520 GTCAAGTAGGAGTAGAATGCACC 58.565 47.826 0.00 0.00 0.00 5.01
151 152 3.451178 TCAAGTAGGAGTAGAATGCACCC 59.549 47.826 0.00 0.00 30.45 4.61
152 153 2.032620 AGTAGGAGTAGAATGCACCCG 58.967 52.381 0.00 0.00 30.45 5.28
153 154 1.068741 GTAGGAGTAGAATGCACCCGG 59.931 57.143 0.00 0.00 30.45 5.73
154 155 1.523938 GGAGTAGAATGCACCCGGC 60.524 63.158 0.00 0.00 45.13 6.13
155 156 1.522569 GAGTAGAATGCACCCGGCT 59.477 57.895 0.00 0.00 45.15 5.52
156 157 0.811616 GAGTAGAATGCACCCGGCTG 60.812 60.000 0.00 0.00 45.15 4.85
157 158 1.819632 GTAGAATGCACCCGGCTGG 60.820 63.158 3.88 3.88 45.15 4.85
167 168 2.350738 CCCGGCTGGTTGAATTTGT 58.649 52.632 11.58 0.00 0.00 2.83
168 169 0.243636 CCCGGCTGGTTGAATTTGTC 59.756 55.000 11.58 0.00 0.00 3.18
169 170 0.243636 CCGGCTGGTTGAATTTGTCC 59.756 55.000 2.29 0.00 0.00 4.02
170 171 0.958091 CGGCTGGTTGAATTTGTCCA 59.042 50.000 0.00 0.00 0.00 4.02
171 172 1.335872 CGGCTGGTTGAATTTGTCCAC 60.336 52.381 0.00 0.00 0.00 4.02
172 173 1.335872 GGCTGGTTGAATTTGTCCACG 60.336 52.381 0.00 0.00 0.00 4.94
173 174 1.336755 GCTGGTTGAATTTGTCCACGT 59.663 47.619 0.00 0.00 0.00 4.49
174 175 2.550606 GCTGGTTGAATTTGTCCACGTA 59.449 45.455 0.00 0.00 0.00 3.57
175 176 3.608474 GCTGGTTGAATTTGTCCACGTAC 60.608 47.826 0.00 0.00 0.00 3.67
176 177 3.811083 TGGTTGAATTTGTCCACGTACT 58.189 40.909 0.00 0.00 0.00 2.73
177 178 3.562141 TGGTTGAATTTGTCCACGTACTG 59.438 43.478 0.00 0.00 0.00 2.74
178 179 3.810941 GGTTGAATTTGTCCACGTACTGA 59.189 43.478 0.00 0.00 0.00 3.41
179 180 4.319261 GGTTGAATTTGTCCACGTACTGAC 60.319 45.833 0.00 0.00 0.00 3.51
195 196 3.319137 CTGACGTCCAGGATTTGAAGA 57.681 47.619 14.12 0.00 39.23 2.87
196 197 3.664107 CTGACGTCCAGGATTTGAAGAA 58.336 45.455 14.12 0.00 39.23 2.52
197 198 3.399330 TGACGTCCAGGATTTGAAGAAC 58.601 45.455 14.12 0.00 0.00 3.01
198 199 2.412089 GACGTCCAGGATTTGAAGAACG 59.588 50.000 3.51 0.00 0.00 3.95
199 200 2.036733 ACGTCCAGGATTTGAAGAACGA 59.963 45.455 0.00 0.00 0.00 3.85
200 201 3.064207 CGTCCAGGATTTGAAGAACGAA 58.936 45.455 0.00 0.00 0.00 3.85
201 202 3.496884 CGTCCAGGATTTGAAGAACGAAA 59.503 43.478 0.00 0.00 0.00 3.46
202 203 4.377431 CGTCCAGGATTTGAAGAACGAAAG 60.377 45.833 0.00 0.00 0.00 2.62
203 204 3.502211 TCCAGGATTTGAAGAACGAAAGC 59.498 43.478 0.00 0.00 0.00 3.51
204 205 3.253188 CCAGGATTTGAAGAACGAAAGCA 59.747 43.478 0.00 0.00 0.00 3.91
205 206 4.082571 CCAGGATTTGAAGAACGAAAGCAT 60.083 41.667 0.00 0.00 0.00 3.79
206 207 5.091431 CAGGATTTGAAGAACGAAAGCATC 58.909 41.667 0.00 0.00 0.00 3.91
207 208 5.006386 AGGATTTGAAGAACGAAAGCATCT 58.994 37.500 0.00 0.00 32.67 2.90
208 209 5.091431 GGATTTGAAGAACGAAAGCATCTG 58.909 41.667 0.00 0.00 31.83 2.90
209 210 5.106555 GGATTTGAAGAACGAAAGCATCTGA 60.107 40.000 0.00 0.00 31.83 3.27
210 211 5.749596 TTTGAAGAACGAAAGCATCTGAA 57.250 34.783 0.00 0.00 31.83 3.02
211 212 5.947228 TTGAAGAACGAAAGCATCTGAAT 57.053 34.783 0.00 0.00 31.83 2.57
212 213 5.947228 TGAAGAACGAAAGCATCTGAATT 57.053 34.783 0.00 0.00 31.83 2.17
213 214 6.317789 TGAAGAACGAAAGCATCTGAATTT 57.682 33.333 0.00 0.00 31.83 1.82
214 215 6.738114 TGAAGAACGAAAGCATCTGAATTTT 58.262 32.000 0.00 0.00 31.83 1.82
215 216 6.857964 TGAAGAACGAAAGCATCTGAATTTTC 59.142 34.615 0.00 0.00 31.83 2.29
216 217 6.566197 AGAACGAAAGCATCTGAATTTTCT 57.434 33.333 0.00 0.00 30.47 2.52
217 218 6.606768 AGAACGAAAGCATCTGAATTTTCTC 58.393 36.000 0.00 3.57 30.47 2.87
218 219 5.947228 ACGAAAGCATCTGAATTTTCTCA 57.053 34.783 0.00 0.00 0.00 3.27
219 220 5.693814 ACGAAAGCATCTGAATTTTCTCAC 58.306 37.500 0.00 0.00 0.00 3.51
220 221 5.471456 ACGAAAGCATCTGAATTTTCTCACT 59.529 36.000 0.00 0.00 0.00 3.41
221 222 6.016777 ACGAAAGCATCTGAATTTTCTCACTT 60.017 34.615 0.00 0.00 0.00 3.16
222 223 6.860023 CGAAAGCATCTGAATTTTCTCACTTT 59.140 34.615 0.00 0.00 0.00 2.66
223 224 7.149015 CGAAAGCATCTGAATTTTCTCACTTTG 60.149 37.037 0.00 0.00 0.00 2.77
224 225 6.645790 AGCATCTGAATTTTCTCACTTTGT 57.354 33.333 0.00 0.00 0.00 2.83
225 226 6.675987 AGCATCTGAATTTTCTCACTTTGTC 58.324 36.000 0.00 0.00 0.00 3.18
226 227 6.489361 AGCATCTGAATTTTCTCACTTTGTCT 59.511 34.615 0.00 0.00 0.00 3.41
227 228 7.014038 AGCATCTGAATTTTCTCACTTTGTCTT 59.986 33.333 0.00 0.00 0.00 3.01
228 229 7.325579 GCATCTGAATTTTCTCACTTTGTCTTC 59.674 37.037 0.00 0.00 0.00 2.87
229 230 6.948353 TCTGAATTTTCTCACTTTGTCTTCG 58.052 36.000 0.00 0.00 0.00 3.79
230 231 5.510671 TGAATTTTCTCACTTTGTCTTCGC 58.489 37.500 0.00 0.00 0.00 4.70
231 232 5.065859 TGAATTTTCTCACTTTGTCTTCGCA 59.934 36.000 0.00 0.00 0.00 5.10
232 233 3.944422 TTTCTCACTTTGTCTTCGCAC 57.056 42.857 0.00 0.00 0.00 5.34
233 234 1.487482 TCTCACTTTGTCTTCGCACG 58.513 50.000 0.00 0.00 0.00 5.34
234 235 1.202371 TCTCACTTTGTCTTCGCACGT 60.202 47.619 0.00 0.00 0.00 4.49
235 236 1.190323 CTCACTTTGTCTTCGCACGTC 59.810 52.381 0.00 0.00 0.00 4.34
236 237 0.927537 CACTTTGTCTTCGCACGTCA 59.072 50.000 0.00 0.00 0.00 4.35
237 238 1.526887 CACTTTGTCTTCGCACGTCAT 59.473 47.619 0.00 0.00 0.00 3.06
238 239 2.032894 CACTTTGTCTTCGCACGTCATT 60.033 45.455 0.00 0.00 0.00 2.57
239 240 2.612212 ACTTTGTCTTCGCACGTCATTT 59.388 40.909 0.00 0.00 0.00 2.32
240 241 2.661504 TTGTCTTCGCACGTCATTTG 57.338 45.000 0.00 0.00 0.00 2.32
241 242 0.234625 TGTCTTCGCACGTCATTTGC 59.765 50.000 0.00 0.00 36.57 3.68
242 243 0.234625 GTCTTCGCACGTCATTTGCA 59.765 50.000 0.00 0.00 40.20 4.08
243 244 1.135972 GTCTTCGCACGTCATTTGCAT 60.136 47.619 0.00 0.00 40.20 3.96
244 245 1.128507 TCTTCGCACGTCATTTGCATC 59.871 47.619 0.00 0.00 40.20 3.91
245 246 0.871057 TTCGCACGTCATTTGCATCA 59.129 45.000 0.00 0.00 40.20 3.07
246 247 0.165727 TCGCACGTCATTTGCATCAC 59.834 50.000 0.00 0.00 40.20 3.06
247 248 0.794229 CGCACGTCATTTGCATCACC 60.794 55.000 0.00 0.00 40.20 4.02
248 249 0.523072 GCACGTCATTTGCATCACCT 59.477 50.000 0.00 0.00 39.93 4.00
249 250 1.068333 GCACGTCATTTGCATCACCTT 60.068 47.619 0.00 0.00 39.93 3.50
250 251 2.607771 GCACGTCATTTGCATCACCTTT 60.608 45.455 0.00 0.00 39.93 3.11
251 252 3.641648 CACGTCATTTGCATCACCTTTT 58.358 40.909 0.00 0.00 0.00 2.27
252 253 4.050553 CACGTCATTTGCATCACCTTTTT 58.949 39.130 0.00 0.00 0.00 1.94
270 271 3.750639 TTTTTCTTTGTCTTCGCACGT 57.249 38.095 0.00 0.00 0.00 4.49
271 272 3.750639 TTTTCTTTGTCTTCGCACGTT 57.249 38.095 0.00 0.00 0.00 3.99
272 273 3.313274 TTTCTTTGTCTTCGCACGTTC 57.687 42.857 0.00 0.00 0.00 3.95
273 274 1.929230 TCTTTGTCTTCGCACGTTCA 58.071 45.000 0.00 0.00 0.00 3.18
274 275 2.479837 TCTTTGTCTTCGCACGTTCAT 58.520 42.857 0.00 0.00 0.00 2.57
275 276 2.869801 TCTTTGTCTTCGCACGTTCATT 59.130 40.909 0.00 0.00 0.00 2.57
276 277 2.941891 TTGTCTTCGCACGTTCATTC 57.058 45.000 0.00 0.00 0.00 2.67
277 278 0.781787 TGTCTTCGCACGTTCATTCG 59.218 50.000 0.00 0.00 0.00 3.34
278 279 0.516524 GTCTTCGCACGTTCATTCGC 60.517 55.000 0.00 0.00 0.00 4.70
279 280 0.941936 TCTTCGCACGTTCATTCGCA 60.942 50.000 0.00 0.00 0.00 5.10
280 281 0.517132 CTTCGCACGTTCATTCGCAG 60.517 55.000 0.00 0.00 0.00 5.18
281 282 2.493088 TTCGCACGTTCATTCGCAGC 62.493 55.000 0.00 0.00 33.88 5.25
282 283 2.555782 GCACGTTCATTCGCAGCA 59.444 55.556 0.00 0.00 36.01 4.41
283 284 1.793613 GCACGTTCATTCGCAGCAC 60.794 57.895 0.00 0.00 36.01 4.40
284 285 1.154413 CACGTTCATTCGCAGCACC 60.154 57.895 0.00 0.00 0.00 5.01
285 286 1.301716 ACGTTCATTCGCAGCACCT 60.302 52.632 0.00 0.00 0.00 4.00
286 287 0.037697 ACGTTCATTCGCAGCACCTA 60.038 50.000 0.00 0.00 0.00 3.08
287 288 1.075542 CGTTCATTCGCAGCACCTAA 58.924 50.000 0.00 0.00 0.00 2.69
288 289 1.061131 CGTTCATTCGCAGCACCTAAG 59.939 52.381 0.00 0.00 0.00 2.18
289 290 2.346803 GTTCATTCGCAGCACCTAAGA 58.653 47.619 0.00 0.00 0.00 2.10
290 291 2.939103 GTTCATTCGCAGCACCTAAGAT 59.061 45.455 0.00 0.00 0.00 2.40
291 292 4.119862 GTTCATTCGCAGCACCTAAGATA 58.880 43.478 0.00 0.00 0.00 1.98
292 293 4.400529 TCATTCGCAGCACCTAAGATAA 57.599 40.909 0.00 0.00 0.00 1.75
293 294 4.765273 TCATTCGCAGCACCTAAGATAAA 58.235 39.130 0.00 0.00 0.00 1.40
294 295 5.182487 TCATTCGCAGCACCTAAGATAAAA 58.818 37.500 0.00 0.00 0.00 1.52
295 296 4.939509 TTCGCAGCACCTAAGATAAAAC 57.060 40.909 0.00 0.00 0.00 2.43
296 297 3.932822 TCGCAGCACCTAAGATAAAACA 58.067 40.909 0.00 0.00 0.00 2.83
297 298 4.320023 TCGCAGCACCTAAGATAAAACAA 58.680 39.130 0.00 0.00 0.00 2.83
298 299 4.941263 TCGCAGCACCTAAGATAAAACAAT 59.059 37.500 0.00 0.00 0.00 2.71
299 300 5.030295 CGCAGCACCTAAGATAAAACAATG 58.970 41.667 0.00 0.00 0.00 2.82
300 301 5.391950 CGCAGCACCTAAGATAAAACAATGT 60.392 40.000 0.00 0.00 0.00 2.71
301 302 5.801947 GCAGCACCTAAGATAAAACAATGTG 59.198 40.000 0.00 0.00 0.00 3.21
302 303 6.570378 GCAGCACCTAAGATAAAACAATGTGT 60.570 38.462 0.00 0.00 0.00 3.72
303 304 7.370383 CAGCACCTAAGATAAAACAATGTGTT 58.630 34.615 0.00 0.00 43.41 3.32
304 305 7.538678 CAGCACCTAAGATAAAACAATGTGTTC 59.461 37.037 0.00 0.00 40.14 3.18
305 306 6.523201 GCACCTAAGATAAAACAATGTGTTCG 59.477 38.462 0.00 0.00 40.14 3.95
306 307 7.021196 CACCTAAGATAAAACAATGTGTTCGG 58.979 38.462 0.00 0.00 40.14 4.30
307 308 6.027749 CCTAAGATAAAACAATGTGTTCGGC 58.972 40.000 0.00 0.00 40.14 5.54
308 309 5.446143 AAGATAAAACAATGTGTTCGGCA 57.554 34.783 0.00 0.00 40.14 5.69
309 310 5.643379 AGATAAAACAATGTGTTCGGCAT 57.357 34.783 0.00 0.00 40.14 4.40
310 311 5.640732 AGATAAAACAATGTGTTCGGCATC 58.359 37.500 0.00 0.00 40.14 3.91
311 312 5.415701 AGATAAAACAATGTGTTCGGCATCT 59.584 36.000 0.00 0.00 40.14 2.90
312 313 4.320608 AAAACAATGTGTTCGGCATCTT 57.679 36.364 0.00 0.00 40.14 2.40
313 314 2.995466 ACAATGTGTTCGGCATCTTG 57.005 45.000 0.00 0.00 0.00 3.02
314 315 2.229792 ACAATGTGTTCGGCATCTTGT 58.770 42.857 0.00 0.00 33.00 3.16
315 316 2.226437 ACAATGTGTTCGGCATCTTGTC 59.774 45.455 0.00 0.00 32.66 3.18
316 317 2.479566 ATGTGTTCGGCATCTTGTCT 57.520 45.000 0.00 0.00 0.00 3.41
317 318 2.254546 TGTGTTCGGCATCTTGTCTT 57.745 45.000 0.00 0.00 0.00 3.01
318 319 2.143122 TGTGTTCGGCATCTTGTCTTC 58.857 47.619 0.00 0.00 0.00 2.87
319 320 1.126846 GTGTTCGGCATCTTGTCTTCG 59.873 52.381 0.00 0.00 0.00 3.79
320 321 0.095417 GTTCGGCATCTTGTCTTCGC 59.905 55.000 0.00 0.00 0.00 4.70
321 322 0.320334 TTCGGCATCTTGTCTTCGCA 60.320 50.000 0.00 0.00 0.00 5.10
322 323 1.014044 TCGGCATCTTGTCTTCGCAC 61.014 55.000 0.00 0.00 0.00 5.34
323 324 1.421485 GGCATCTTGTCTTCGCACG 59.579 57.895 0.00 0.00 0.00 5.34
324 325 1.291877 GGCATCTTGTCTTCGCACGT 61.292 55.000 0.00 0.00 0.00 4.49
325 326 0.093705 GCATCTTGTCTTCGCACGTC 59.906 55.000 0.00 0.00 0.00 4.34
326 327 0.363512 CATCTTGTCTTCGCACGTCG 59.636 55.000 0.00 0.00 40.15 5.12
327 328 0.039437 ATCTTGTCTTCGCACGTCGT 60.039 50.000 0.00 0.00 39.67 4.34
328 329 0.248743 TCTTGTCTTCGCACGTCGTT 60.249 50.000 0.00 0.00 39.67 3.85
329 330 0.575390 CTTGTCTTCGCACGTCGTTT 59.425 50.000 0.00 0.00 39.67 3.60
330 331 1.000884 TTGTCTTCGCACGTCGTTTT 58.999 45.000 0.00 0.00 39.67 2.43
331 332 1.000884 TGTCTTCGCACGTCGTTTTT 58.999 45.000 0.00 0.00 39.67 1.94
332 333 1.267136 TGTCTTCGCACGTCGTTTTTG 60.267 47.619 0.00 0.00 39.67 2.44
333 334 1.000884 TCTTCGCACGTCGTTTTTGT 58.999 45.000 0.00 0.00 39.67 2.83
334 335 1.394227 TCTTCGCACGTCGTTTTTGTT 59.606 42.857 0.00 0.00 39.67 2.83
335 336 2.159680 TCTTCGCACGTCGTTTTTGTTT 60.160 40.909 0.00 0.00 39.67 2.83
336 337 1.800399 TCGCACGTCGTTTTTGTTTC 58.200 45.000 0.00 0.00 39.67 2.78
337 338 1.394227 TCGCACGTCGTTTTTGTTTCT 59.606 42.857 0.00 0.00 39.67 2.52
338 339 1.507120 CGCACGTCGTTTTTGTTTCTG 59.493 47.619 0.00 0.00 0.00 3.02
339 340 1.843753 GCACGTCGTTTTTGTTTCTGG 59.156 47.619 0.00 0.00 0.00 3.86
340 341 2.729778 GCACGTCGTTTTTGTTTCTGGT 60.730 45.455 0.00 0.00 0.00 4.00
341 342 2.843643 CACGTCGTTTTTGTTTCTGGTG 59.156 45.455 0.00 0.00 0.00 4.17
342 343 2.743126 ACGTCGTTTTTGTTTCTGGTGA 59.257 40.909 0.00 0.00 0.00 4.02
356 357 2.158534 TCTGGTGAGCTTTTTGGCCTTA 60.159 45.455 3.32 0.00 0.00 2.69
370 371 4.464069 TGGCCTTATGGTTGTATTTTGC 57.536 40.909 3.32 0.00 35.27 3.68
372 373 4.159506 TGGCCTTATGGTTGTATTTTGCTC 59.840 41.667 3.32 0.00 35.27 4.26
373 374 4.441495 GGCCTTATGGTTGTATTTTGCTCC 60.441 45.833 0.00 0.00 35.27 4.70
384 385 5.587289 TGTATTTTGCTCCATTATTTCGGC 58.413 37.500 0.00 0.00 0.00 5.54
393 394 6.017440 TGCTCCATTATTTCGGCTTTATGTAC 60.017 38.462 0.00 0.00 0.00 2.90
396 397 5.048294 CCATTATTTCGGCTTTATGTACCCC 60.048 44.000 0.00 0.00 0.00 4.95
426 427 3.769844 ACGAAATCACAGACTATGGAGGT 59.230 43.478 0.00 0.00 0.00 3.85
427 428 4.954202 ACGAAATCACAGACTATGGAGGTA 59.046 41.667 0.00 0.00 0.00 3.08
428 429 5.598830 ACGAAATCACAGACTATGGAGGTAT 59.401 40.000 0.00 0.00 0.00 2.73
429 430 6.098409 ACGAAATCACAGACTATGGAGGTATT 59.902 38.462 0.00 0.00 0.00 1.89
430 431 6.422100 CGAAATCACAGACTATGGAGGTATTG 59.578 42.308 0.00 0.00 0.00 1.90
431 432 5.815233 ATCACAGACTATGGAGGTATTGG 57.185 43.478 0.00 0.00 0.00 3.16
432 433 3.388024 TCACAGACTATGGAGGTATTGGC 59.612 47.826 0.00 0.00 0.00 4.52
433 434 2.706190 ACAGACTATGGAGGTATTGGCC 59.294 50.000 0.00 0.00 0.00 5.36
434 435 2.705658 CAGACTATGGAGGTATTGGCCA 59.294 50.000 0.00 0.00 35.91 5.36
435 436 3.136443 CAGACTATGGAGGTATTGGCCAA 59.864 47.826 23.00 23.00 34.95 4.52
436 437 3.136626 AGACTATGGAGGTATTGGCCAAC 59.863 47.826 23.27 10.14 34.95 3.77
437 438 3.123273 ACTATGGAGGTATTGGCCAACT 58.877 45.455 23.27 14.15 34.95 3.16
438 439 2.442236 ATGGAGGTATTGGCCAACTG 57.558 50.000 23.27 0.00 34.95 3.16
439 440 1.367346 TGGAGGTATTGGCCAACTGA 58.633 50.000 23.27 6.37 0.00 3.41
440 441 1.281867 TGGAGGTATTGGCCAACTGAG 59.718 52.381 23.27 0.00 0.00 3.35
441 442 1.559682 GGAGGTATTGGCCAACTGAGA 59.440 52.381 23.27 0.00 0.00 3.27
442 443 2.420687 GGAGGTATTGGCCAACTGAGAG 60.421 54.545 23.27 0.00 0.00 3.20
443 444 2.501723 GAGGTATTGGCCAACTGAGAGA 59.498 50.000 23.27 0.00 0.00 3.10
444 445 2.912956 AGGTATTGGCCAACTGAGAGAA 59.087 45.455 23.27 0.00 0.00 2.87
445 446 3.525199 AGGTATTGGCCAACTGAGAGAAT 59.475 43.478 23.27 3.68 0.00 2.40
446 447 3.879892 GGTATTGGCCAACTGAGAGAATC 59.120 47.826 23.27 1.91 0.00 2.52
454 455 4.685575 GCCAACTGAGAGAATCCAAGCTAT 60.686 45.833 0.00 0.00 33.66 2.97
463 464 1.507140 ATCCAAGCTATTCCGTGGGA 58.493 50.000 0.10 0.00 35.43 4.37
474 475 5.106078 GCTATTCCGTGGGAAAAACATACAA 60.106 40.000 0.56 0.00 45.41 2.41
489 490 4.823157 ACATACAACATGGCAGTACGTAA 58.177 39.130 0.00 0.00 0.00 3.18
562 563 7.872993 TCAGAGTTTGACCACACTTCTTTATAG 59.127 37.037 0.00 0.00 0.00 1.31
563 564 7.118390 CAGAGTTTGACCACACTTCTTTATAGG 59.882 40.741 0.00 0.00 0.00 2.57
564 565 6.238648 AGTTTGACCACACTTCTTTATAGGG 58.761 40.000 0.00 0.00 0.00 3.53
565 566 6.043938 AGTTTGACCACACTTCTTTATAGGGA 59.956 38.462 0.00 0.00 0.00 4.20
566 567 5.677319 TGACCACACTTCTTTATAGGGAG 57.323 43.478 0.00 0.00 0.00 4.30
567 568 5.091552 TGACCACACTTCTTTATAGGGAGT 58.908 41.667 0.00 0.00 0.00 3.85
568 569 6.258354 TGACCACACTTCTTTATAGGGAGTA 58.742 40.000 0.00 0.00 0.00 2.59
569 570 6.154021 TGACCACACTTCTTTATAGGGAGTAC 59.846 42.308 0.00 0.00 0.00 2.73
570 571 5.424573 ACCACACTTCTTTATAGGGAGTACC 59.575 44.000 0.00 0.00 40.67 3.34
601 602 7.348080 TCATCTAGATGAGACGTAATTTGGT 57.652 36.000 27.93 0.00 42.42 3.67
602 603 7.426410 TCATCTAGATGAGACGTAATTTGGTC 58.574 38.462 27.93 1.46 42.42 4.02
603 604 7.285629 TCATCTAGATGAGACGTAATTTGGTCT 59.714 37.037 27.93 9.96 45.71 3.85
611 612 4.935808 AGACGTAATTTGGTCTCATTCACC 59.064 41.667 5.52 0.00 39.18 4.02
612 613 4.906618 ACGTAATTTGGTCTCATTCACCT 58.093 39.130 0.00 0.00 34.66 4.00
613 614 4.695455 ACGTAATTTGGTCTCATTCACCTG 59.305 41.667 0.00 0.00 34.66 4.00
614 615 4.935205 CGTAATTTGGTCTCATTCACCTGA 59.065 41.667 0.00 0.00 34.66 3.86
615 616 5.411361 CGTAATTTGGTCTCATTCACCTGAA 59.589 40.000 0.00 0.00 38.56 3.02
616 617 6.072728 CGTAATTTGGTCTCATTCACCTGAAA 60.073 38.462 0.00 0.00 37.61 2.69
617 618 6.729690 AATTTGGTCTCATTCACCTGAAAA 57.270 33.333 0.00 0.00 37.61 2.29
618 619 6.729690 ATTTGGTCTCATTCACCTGAAAAA 57.270 33.333 0.00 0.00 37.61 1.94
619 620 5.514274 TTGGTCTCATTCACCTGAAAAAC 57.486 39.130 0.00 0.00 37.61 2.43
620 621 4.531854 TGGTCTCATTCACCTGAAAAACA 58.468 39.130 0.00 0.00 37.61 2.83
621 622 4.952957 TGGTCTCATTCACCTGAAAAACAA 59.047 37.500 0.00 0.00 37.61 2.83
622 623 5.067674 TGGTCTCATTCACCTGAAAAACAAG 59.932 40.000 0.00 0.00 37.61 3.16
623 624 5.299279 GGTCTCATTCACCTGAAAAACAAGA 59.701 40.000 0.00 0.00 37.61 3.02
624 625 6.183360 GGTCTCATTCACCTGAAAAACAAGAA 60.183 38.462 0.00 0.00 37.61 2.52
625 626 6.693113 GTCTCATTCACCTGAAAAACAAGAAC 59.307 38.462 0.00 0.00 37.61 3.01
626 627 5.577835 TCATTCACCTGAAAAACAAGAACG 58.422 37.500 0.00 0.00 37.61 3.95
627 628 4.364415 TTCACCTGAAAAACAAGAACGG 57.636 40.909 0.00 0.00 0.00 4.44
628 629 3.611970 TCACCTGAAAAACAAGAACGGA 58.388 40.909 0.00 0.00 0.00 4.69
629 630 4.204012 TCACCTGAAAAACAAGAACGGAT 58.796 39.130 0.00 0.00 0.00 4.18
630 631 5.369833 TCACCTGAAAAACAAGAACGGATA 58.630 37.500 0.00 0.00 0.00 2.59
631 632 5.237779 TCACCTGAAAAACAAGAACGGATAC 59.762 40.000 0.00 0.00 0.00 2.24
632 633 5.008217 CACCTGAAAAACAAGAACGGATACA 59.992 40.000 0.00 0.00 0.00 2.29
633 634 5.591067 ACCTGAAAAACAAGAACGGATACAA 59.409 36.000 0.00 0.00 0.00 2.41
634 635 5.912955 CCTGAAAAACAAGAACGGATACAAC 59.087 40.000 0.00 0.00 0.00 3.32
635 636 5.823353 TGAAAAACAAGAACGGATACAACC 58.177 37.500 0.00 0.00 0.00 3.77
636 637 4.841443 AAAACAAGAACGGATACAACCC 57.159 40.909 0.00 0.00 0.00 4.11
637 638 3.495434 AACAAGAACGGATACAACCCA 57.505 42.857 0.00 0.00 0.00 4.51
638 639 3.713826 ACAAGAACGGATACAACCCAT 57.286 42.857 0.00 0.00 0.00 4.00
639 640 4.829872 ACAAGAACGGATACAACCCATA 57.170 40.909 0.00 0.00 0.00 2.74
640 641 5.367945 ACAAGAACGGATACAACCCATAT 57.632 39.130 0.00 0.00 0.00 1.78
641 642 5.365619 ACAAGAACGGATACAACCCATATC 58.634 41.667 0.00 0.00 0.00 1.63
642 643 5.104693 ACAAGAACGGATACAACCCATATCA 60.105 40.000 0.00 0.00 31.69 2.15
643 644 5.215252 AGAACGGATACAACCCATATCAG 57.785 43.478 0.00 0.00 31.69 2.90
644 645 3.402628 ACGGATACAACCCATATCAGC 57.597 47.619 0.00 0.00 31.69 4.26
645 646 2.703536 ACGGATACAACCCATATCAGCA 59.296 45.455 0.00 0.00 31.69 4.41
646 647 3.067106 CGGATACAACCCATATCAGCAC 58.933 50.000 0.00 0.00 31.69 4.40
647 648 3.494223 CGGATACAACCCATATCAGCACA 60.494 47.826 0.00 0.00 31.69 4.57
648 649 3.815401 GGATACAACCCATATCAGCACAC 59.185 47.826 0.00 0.00 31.69 3.82
649 650 2.877097 ACAACCCATATCAGCACACA 57.123 45.000 0.00 0.00 0.00 3.72
650 651 2.436417 ACAACCCATATCAGCACACAC 58.564 47.619 0.00 0.00 0.00 3.82
651 652 1.398041 CAACCCATATCAGCACACACG 59.602 52.381 0.00 0.00 0.00 4.49
652 653 0.744414 ACCCATATCAGCACACACGC 60.744 55.000 0.00 0.00 0.00 5.34
653 654 0.744057 CCCATATCAGCACACACGCA 60.744 55.000 0.00 0.00 0.00 5.24
654 655 1.302366 CCATATCAGCACACACGCAT 58.698 50.000 0.00 0.00 0.00 4.73
655 656 1.262417 CCATATCAGCACACACGCATC 59.738 52.381 0.00 0.00 0.00 3.91
656 657 2.207590 CATATCAGCACACACGCATCT 58.792 47.619 0.00 0.00 0.00 2.90
657 658 2.385013 TATCAGCACACACGCATCTT 57.615 45.000 0.00 0.00 0.00 2.40
658 659 2.385013 ATCAGCACACACGCATCTTA 57.615 45.000 0.00 0.00 0.00 2.10
659 660 2.385013 TCAGCACACACGCATCTTAT 57.615 45.000 0.00 0.00 0.00 1.73
660 661 3.518634 TCAGCACACACGCATCTTATA 57.481 42.857 0.00 0.00 0.00 0.98
661 662 3.447742 TCAGCACACACGCATCTTATAG 58.552 45.455 0.00 0.00 0.00 1.31
662 663 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
663 664 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
664 665 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
665 666 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
666 667 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
667 668 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
668 669 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
669 670 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
670 671 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
671 672 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
672 673 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
673 674 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
674 675 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
675 676 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
676 677 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
677 678 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
678 679 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
679 680 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
680 681 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
681 682 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
682 683 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
683 684 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
684 685 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
685 686 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
686 687 6.016024 GCATCACATCCAATGGCTATAAAAGA 60.016 38.462 0.00 0.00 33.60 2.52
687 688 7.309621 GCATCACATCCAATGGCTATAAAAGAT 60.310 37.037 0.00 0.00 33.60 2.40
688 689 7.514784 TCACATCCAATGGCTATAAAAGATG 57.485 36.000 0.00 8.84 36.73 2.90
689 690 7.289310 TCACATCCAATGGCTATAAAAGATGA 58.711 34.615 14.33 1.03 35.13 2.92
690 691 7.779326 TCACATCCAATGGCTATAAAAGATGAA 59.221 33.333 14.33 4.30 35.13 2.57
691 692 8.582437 CACATCCAATGGCTATAAAAGATGAAT 58.418 33.333 14.33 0.00 35.13 2.57
692 693 8.582437 ACATCCAATGGCTATAAAAGATGAATG 58.418 33.333 14.33 0.00 35.13 2.67
693 694 8.799367 CATCCAATGGCTATAAAAGATGAATGA 58.201 33.333 0.00 0.00 33.35 2.57
694 695 8.400184 TCCAATGGCTATAAAAGATGAATGAG 57.600 34.615 0.00 0.00 0.00 2.90
695 696 8.219868 TCCAATGGCTATAAAAGATGAATGAGA 58.780 33.333 0.00 0.00 0.00 3.27
696 697 8.295288 CCAATGGCTATAAAAGATGAATGAGAC 58.705 37.037 0.00 0.00 0.00 3.36
697 698 7.992754 ATGGCTATAAAAGATGAATGAGACC 57.007 36.000 0.00 0.00 0.00 3.85
698 699 6.899089 TGGCTATAAAAGATGAATGAGACCA 58.101 36.000 0.00 0.00 0.00 4.02
699 700 7.345691 TGGCTATAAAAGATGAATGAGACCAA 58.654 34.615 0.00 0.00 0.00 3.67
700 701 7.833682 TGGCTATAAAAGATGAATGAGACCAAA 59.166 33.333 0.00 0.00 0.00 3.28
701 702 8.854117 GGCTATAAAAGATGAATGAGACCAAAT 58.146 33.333 0.00 0.00 0.00 2.32
736 737 7.897575 CTAGATGAGTTCTAGCAAAACTGTT 57.102 36.000 0.32 0.00 45.63 3.16
737 738 6.793492 AGATGAGTTCTAGCAAAACTGTTC 57.207 37.500 0.32 0.00 37.10 3.18
800 810 5.393962 CGGGTGATGTTCATCTTCTTTTTC 58.606 41.667 12.94 0.00 0.00 2.29
810 820 8.285394 TGTTCATCTTCTTTTTCTCAAGAATCG 58.715 33.333 0.00 0.00 41.06 3.34
851 862 5.759963 AGACTACAACTACAAGACGTCAAG 58.240 41.667 19.50 11.96 0.00 3.02
915 934 1.002366 CTGTCCGGCATCTTTCTTCG 58.998 55.000 0.00 0.00 0.00 3.79
935 959 1.610624 GCCAGCTACCTACACTGCAAA 60.611 52.381 0.00 0.00 0.00 3.68
1068 1125 3.442977 TCACTCTTCTTCCGGCTAGTTAC 59.557 47.826 0.00 0.00 0.00 2.50
1710 7437 2.037136 CCAGAAGCTCAAGGCCGTG 61.037 63.158 13.08 13.08 43.05 4.94
1770 7500 2.413239 CGTGTGTGCATGATTTCCAGTC 60.413 50.000 0.00 0.00 33.58 3.51
1797 7555 6.037062 CACATCGTGTCAGCTGGATAAAAATA 59.963 38.462 15.13 0.00 0.00 1.40
1955 7745 0.784778 GGTTCAGAGCAACTCGAACG 59.215 55.000 17.59 0.00 40.81 3.95
1956 7746 0.161870 GTTCAGAGCAACTCGAACGC 59.838 55.000 12.81 0.00 35.87 4.84
1962 7752 1.154836 GCAACTCGAACGCGTCAAG 60.155 57.895 14.44 13.07 38.98 3.02
1975 7765 2.737783 CGCGTCAAGTACCCACATTTTA 59.262 45.455 0.00 0.00 0.00 1.52
1976 7766 3.186817 CGCGTCAAGTACCCACATTTTAA 59.813 43.478 0.00 0.00 0.00 1.52
1977 7767 4.142773 CGCGTCAAGTACCCACATTTTAAT 60.143 41.667 0.00 0.00 0.00 1.40
1978 7768 5.618195 CGCGTCAAGTACCCACATTTTAATT 60.618 40.000 0.00 0.00 0.00 1.40
1999 7789 9.544314 TTAATTGTTTTATGTCCGTTTGTATCG 57.456 29.630 0.00 0.00 0.00 2.92
2011 7802 1.597797 TTGTATCGGGCGAACGGACT 61.598 55.000 0.00 0.00 0.00 3.85
2046 7837 1.070105 CGTTTGGGTCGGTCCTTGA 59.930 57.895 0.00 0.00 36.25 3.02
2050 7841 1.719529 TTGGGTCGGTCCTTGAACTA 58.280 50.000 0.00 0.00 36.25 2.24
2055 7846 2.064014 GTCGGTCCTTGAACTAAACGG 58.936 52.381 0.00 0.00 0.00 4.44
2057 7848 1.796459 CGGTCCTTGAACTAAACGGTG 59.204 52.381 0.00 0.00 0.00 4.94
2058 7849 2.148768 GGTCCTTGAACTAAACGGTGG 58.851 52.381 0.00 0.00 0.00 4.61
2061 7852 0.879090 CTTGAACTAAACGGTGGCCC 59.121 55.000 0.00 0.00 0.00 5.80
2231 8034 1.122019 ACCCTAGGCGTCATCATCCC 61.122 60.000 2.05 0.00 0.00 3.85
2255 8065 0.681887 TAAGCCGGTGAGGTCGATGA 60.682 55.000 1.90 0.00 43.70 2.92
2269 8079 2.844839 ATGAGCCGACCTAGCCCC 60.845 66.667 0.00 0.00 0.00 5.80
2400 12159 1.309013 TCCTCCTCCCATGCCCAAT 60.309 57.895 0.00 0.00 0.00 3.16
2417 12176 1.480212 AATGGGCACGACACTCCTCA 61.480 55.000 0.00 0.00 0.00 3.86
2599 12358 3.129502 CACCGGGATGCAGTGCAG 61.130 66.667 24.20 11.76 43.65 4.41
2602 12361 2.821366 CGGGATGCAGTGCAGGTC 60.821 66.667 24.20 16.52 43.65 3.85
2605 12364 1.812922 GGATGCAGTGCAGGTCGAG 60.813 63.158 24.20 0.00 43.65 4.04
2630 12389 1.825474 CAGTCGTGGAGGGTTACATCT 59.175 52.381 0.00 0.00 0.00 2.90
2644 12403 2.812836 ACATCTGGCCATGACAATGA 57.187 45.000 13.35 1.98 35.67 2.57
2669 12428 1.094785 AGTAATGCCAATGACACCGC 58.905 50.000 0.00 0.00 0.00 5.68
2688 12447 3.443045 CTTGGTGCACCCGGATGC 61.443 66.667 32.62 16.15 46.32 3.91
2689 12448 3.925630 CTTGGTGCACCCGGATGCT 62.926 63.158 32.62 0.00 46.28 3.79
2690 12449 4.720902 TGGTGCACCCGGATGCTG 62.721 66.667 32.62 3.07 46.28 4.41
2691 12450 4.722700 GGTGCACCCGGATGCTGT 62.723 66.667 24.38 0.00 46.28 4.40
2692 12451 3.127533 GTGCACCCGGATGCTGTC 61.128 66.667 24.38 8.94 46.28 3.51
2693 12452 4.758251 TGCACCCGGATGCTGTCG 62.758 66.667 24.38 0.00 46.28 4.35
2695 12454 4.082523 CACCCGGATGCTGTCGGT 62.083 66.667 0.73 0.00 44.32 4.69
2696 12455 4.082523 ACCCGGATGCTGTCGGTG 62.083 66.667 0.73 5.67 44.32 4.94
2698 12457 4.758251 CCGGATGCTGTCGGTGCA 62.758 66.667 0.00 0.00 44.95 4.57
2699 12458 2.741985 CGGATGCTGTCGGTGCAA 60.742 61.111 0.00 0.00 44.01 4.08
2700 12459 2.870372 GGATGCTGTCGGTGCAAC 59.130 61.111 0.00 0.00 44.01 4.17
2701 12460 1.965930 GGATGCTGTCGGTGCAACA 60.966 57.895 0.98 0.00 44.01 3.33
2702 12461 1.514678 GGATGCTGTCGGTGCAACAA 61.515 55.000 0.98 0.00 44.01 2.83
2703 12462 0.310543 GATGCTGTCGGTGCAACAAA 59.689 50.000 0.98 0.00 44.01 2.83
2704 12463 0.030638 ATGCTGTCGGTGCAACAAAC 59.969 50.000 0.98 0.00 44.01 2.93
2705 12464 1.299089 GCTGTCGGTGCAACAAACC 60.299 57.895 0.98 0.00 39.98 3.27
2706 12465 1.358759 CTGTCGGTGCAACAAACCC 59.641 57.895 0.98 0.00 39.98 4.11
2707 12466 1.077357 TGTCGGTGCAACAAACCCT 60.077 52.632 0.98 0.00 39.98 4.34
2708 12467 0.180642 TGTCGGTGCAACAAACCCTA 59.819 50.000 0.98 0.00 39.98 3.53
2709 12468 0.872388 GTCGGTGCAACAAACCCTAG 59.128 55.000 0.98 0.00 39.98 3.02
2710 12469 0.250553 TCGGTGCAACAAACCCTAGG 60.251 55.000 0.98 0.06 39.98 3.02
2711 12470 0.536460 CGGTGCAACAAACCCTAGGT 60.536 55.000 8.29 0.00 39.98 3.08
2712 12471 1.244816 GGTGCAACAAACCCTAGGTC 58.755 55.000 8.29 0.00 39.98 3.85
2713 12472 1.244816 GTGCAACAAACCCTAGGTCC 58.755 55.000 8.29 0.00 32.42 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.424319 CTTCTTGCAGTATAAGACAAGTTAGAA 57.576 33.333 0.00 0.00 40.29 2.10
11 12 8.035394 CCTTCTTGCAGTATAAGACAAGTTAGA 58.965 37.037 0.00 0.00 40.29 2.10
12 13 7.201565 GCCTTCTTGCAGTATAAGACAAGTTAG 60.202 40.741 0.00 0.00 40.29 2.34
13 14 6.594159 GCCTTCTTGCAGTATAAGACAAGTTA 59.406 38.462 0.00 0.00 40.29 2.24
14 15 5.412904 GCCTTCTTGCAGTATAAGACAAGTT 59.587 40.000 0.00 0.00 40.29 2.66
15 16 4.938226 GCCTTCTTGCAGTATAAGACAAGT 59.062 41.667 0.00 0.00 40.29 3.16
16 17 4.333926 GGCCTTCTTGCAGTATAAGACAAG 59.666 45.833 0.00 0.00 40.66 3.16
17 18 4.261801 GGCCTTCTTGCAGTATAAGACAA 58.738 43.478 0.00 0.00 34.14 3.18
18 19 3.263170 TGGCCTTCTTGCAGTATAAGACA 59.737 43.478 3.32 0.00 34.14 3.41
19 20 3.873910 TGGCCTTCTTGCAGTATAAGAC 58.126 45.455 3.32 0.00 34.14 3.01
20 21 3.118261 CCTGGCCTTCTTGCAGTATAAGA 60.118 47.826 3.32 0.00 32.64 2.10
21 22 3.209410 CCTGGCCTTCTTGCAGTATAAG 58.791 50.000 3.32 0.00 0.00 1.73
22 23 2.576191 ACCTGGCCTTCTTGCAGTATAA 59.424 45.455 3.32 0.00 0.00 0.98
23 24 2.196595 ACCTGGCCTTCTTGCAGTATA 58.803 47.619 3.32 0.00 0.00 1.47
24 25 0.995024 ACCTGGCCTTCTTGCAGTAT 59.005 50.000 3.32 0.00 0.00 2.12
25 26 1.278127 GTACCTGGCCTTCTTGCAGTA 59.722 52.381 3.32 0.00 0.00 2.74
26 27 0.036875 GTACCTGGCCTTCTTGCAGT 59.963 55.000 3.32 0.00 0.00 4.40
27 28 0.326264 AGTACCTGGCCTTCTTGCAG 59.674 55.000 3.32 0.00 0.00 4.41
28 29 0.324943 GAGTACCTGGCCTTCTTGCA 59.675 55.000 3.32 0.00 0.00 4.08
29 30 0.393132 GGAGTACCTGGCCTTCTTGC 60.393 60.000 3.32 0.00 0.00 4.01
30 31 1.280457 AGGAGTACCTGGCCTTCTTG 58.720 55.000 3.32 0.00 45.92 3.02
31 32 3.817826 AGGAGTACCTGGCCTTCTT 57.182 52.632 3.32 0.00 45.92 2.52
61 62 6.469782 AATGTATTGCTTGAACCTAATGGG 57.530 37.500 0.00 0.00 41.89 4.00
62 63 8.465999 TGTTAATGTATTGCTTGAACCTAATGG 58.534 33.333 0.00 0.00 39.83 3.16
63 64 9.853555 TTGTTAATGTATTGCTTGAACCTAATG 57.146 29.630 0.00 0.00 0.00 1.90
67 68 8.466798 GGTATTGTTAATGTATTGCTTGAACCT 58.533 33.333 0.00 0.00 0.00 3.50
68 69 8.247562 TGGTATTGTTAATGTATTGCTTGAACC 58.752 33.333 0.00 0.00 0.00 3.62
69 70 9.072294 GTGGTATTGTTAATGTATTGCTTGAAC 57.928 33.333 0.00 0.00 0.00 3.18
70 71 8.797438 TGTGGTATTGTTAATGTATTGCTTGAA 58.203 29.630 0.00 0.00 0.00 2.69
71 72 8.341892 TGTGGTATTGTTAATGTATTGCTTGA 57.658 30.769 0.00 0.00 0.00 3.02
72 73 8.978564 TTGTGGTATTGTTAATGTATTGCTTG 57.021 30.769 0.00 0.00 0.00 4.01
74 75 9.801873 GATTTGTGGTATTGTTAATGTATTGCT 57.198 29.630 0.00 0.00 0.00 3.91
75 76 9.030301 GGATTTGTGGTATTGTTAATGTATTGC 57.970 33.333 0.00 0.00 0.00 3.56
76 77 9.528018 GGGATTTGTGGTATTGTTAATGTATTG 57.472 33.333 0.00 0.00 0.00 1.90
77 78 9.487442 AGGGATTTGTGGTATTGTTAATGTATT 57.513 29.630 0.00 0.00 0.00 1.89
78 79 9.131791 GAGGGATTTGTGGTATTGTTAATGTAT 57.868 33.333 0.00 0.00 0.00 2.29
79 80 8.333235 AGAGGGATTTGTGGTATTGTTAATGTA 58.667 33.333 0.00 0.00 0.00 2.29
80 81 7.182060 AGAGGGATTTGTGGTATTGTTAATGT 58.818 34.615 0.00 0.00 0.00 2.71
81 82 7.557719 AGAGAGGGATTTGTGGTATTGTTAATG 59.442 37.037 0.00 0.00 0.00 1.90
82 83 7.643123 AGAGAGGGATTTGTGGTATTGTTAAT 58.357 34.615 0.00 0.00 0.00 1.40
83 84 7.027874 AGAGAGGGATTTGTGGTATTGTTAA 57.972 36.000 0.00 0.00 0.00 2.01
84 85 6.636454 AGAGAGGGATTTGTGGTATTGTTA 57.364 37.500 0.00 0.00 0.00 2.41
85 86 5.520748 AGAGAGGGATTTGTGGTATTGTT 57.479 39.130 0.00 0.00 0.00 2.83
86 87 6.831664 ATAGAGAGGGATTTGTGGTATTGT 57.168 37.500 0.00 0.00 0.00 2.71
87 88 7.512992 AGAATAGAGAGGGATTTGTGGTATTG 58.487 38.462 0.00 0.00 0.00 1.90
88 89 7.570607 AGAGAATAGAGAGGGATTTGTGGTATT 59.429 37.037 0.00 0.00 0.00 1.89
89 90 7.079048 AGAGAATAGAGAGGGATTTGTGGTAT 58.921 38.462 0.00 0.00 0.00 2.73
90 91 6.444704 AGAGAATAGAGAGGGATTTGTGGTA 58.555 40.000 0.00 0.00 0.00 3.25
91 92 5.284582 AGAGAATAGAGAGGGATTTGTGGT 58.715 41.667 0.00 0.00 0.00 4.16
92 93 5.885449 AGAGAATAGAGAGGGATTTGTGG 57.115 43.478 0.00 0.00 0.00 4.17
93 94 5.526846 GCAAGAGAATAGAGAGGGATTTGTG 59.473 44.000 0.00 0.00 0.00 3.33
94 95 5.397334 GGCAAGAGAATAGAGAGGGATTTGT 60.397 44.000 0.00 0.00 0.00 2.83
95 96 5.062528 GGCAAGAGAATAGAGAGGGATTTG 58.937 45.833 0.00 0.00 0.00 2.32
96 97 4.202305 CGGCAAGAGAATAGAGAGGGATTT 60.202 45.833 0.00 0.00 0.00 2.17
97 98 3.323403 CGGCAAGAGAATAGAGAGGGATT 59.677 47.826 0.00 0.00 0.00 3.01
98 99 2.896685 CGGCAAGAGAATAGAGAGGGAT 59.103 50.000 0.00 0.00 0.00 3.85
99 100 2.311463 CGGCAAGAGAATAGAGAGGGA 58.689 52.381 0.00 0.00 0.00 4.20
100 101 1.342819 CCGGCAAGAGAATAGAGAGGG 59.657 57.143 0.00 0.00 0.00 4.30
101 102 1.270041 GCCGGCAAGAGAATAGAGAGG 60.270 57.143 24.80 0.00 0.00 3.69
102 103 1.410517 TGCCGGCAAGAGAATAGAGAG 59.589 52.381 30.74 0.00 0.00 3.20
103 104 1.137086 GTGCCGGCAAGAGAATAGAGA 59.863 52.381 34.66 0.00 0.00 3.10
104 105 1.576356 GTGCCGGCAAGAGAATAGAG 58.424 55.000 34.66 0.00 0.00 2.43
105 106 0.179111 CGTGCCGGCAAGAGAATAGA 60.179 55.000 35.10 3.72 0.00 1.98
106 107 0.460284 ACGTGCCGGCAAGAGAATAG 60.460 55.000 42.39 22.48 0.00 1.73
107 108 0.818938 TACGTGCCGGCAAGAGAATA 59.181 50.000 42.39 24.50 0.00 1.75
108 109 0.460284 CTACGTGCCGGCAAGAGAAT 60.460 55.000 42.39 25.53 0.00 2.40
109 110 1.080093 CTACGTGCCGGCAAGAGAA 60.080 57.895 42.39 26.70 0.00 2.87
110 111 2.571757 CTACGTGCCGGCAAGAGA 59.428 61.111 42.39 28.85 0.00 3.10
111 112 2.509336 CCTACGTGCCGGCAAGAG 60.509 66.667 42.39 31.92 0.00 2.85
112 113 3.291101 GACCTACGTGCCGGCAAGA 62.291 63.158 42.39 26.28 0.00 3.02
113 114 2.813908 GACCTACGTGCCGGCAAG 60.814 66.667 36.05 36.05 0.00 4.01
114 115 3.166490 TTGACCTACGTGCCGGCAA 62.166 57.895 34.66 16.03 0.00 4.52
115 116 3.583276 CTTGACCTACGTGCCGGCA 62.583 63.158 29.03 29.03 0.00 5.69
116 117 2.216750 TACTTGACCTACGTGCCGGC 62.217 60.000 22.73 22.73 0.00 6.13
117 118 0.179145 CTACTTGACCTACGTGCCGG 60.179 60.000 0.00 0.00 0.00 6.13
118 119 0.179145 CCTACTTGACCTACGTGCCG 60.179 60.000 0.00 0.00 0.00 5.69
119 120 1.134560 CTCCTACTTGACCTACGTGCC 59.865 57.143 0.00 0.00 0.00 5.01
120 121 1.817447 ACTCCTACTTGACCTACGTGC 59.183 52.381 0.00 0.00 0.00 5.34
121 122 4.511527 TCTACTCCTACTTGACCTACGTG 58.488 47.826 0.00 0.00 0.00 4.49
122 123 4.833478 TCTACTCCTACTTGACCTACGT 57.167 45.455 0.00 0.00 0.00 3.57
123 124 5.505985 GCATTCTACTCCTACTTGACCTACG 60.506 48.000 0.00 0.00 0.00 3.51
124 125 5.360144 TGCATTCTACTCCTACTTGACCTAC 59.640 44.000 0.00 0.00 0.00 3.18
125 126 5.360144 GTGCATTCTACTCCTACTTGACCTA 59.640 44.000 0.00 0.00 0.00 3.08
126 127 4.160626 GTGCATTCTACTCCTACTTGACCT 59.839 45.833 0.00 0.00 0.00 3.85
127 128 4.434520 GTGCATTCTACTCCTACTTGACC 58.565 47.826 0.00 0.00 0.00 4.02
128 129 4.434520 GGTGCATTCTACTCCTACTTGAC 58.565 47.826 0.00 0.00 0.00 3.18
129 130 3.451178 GGGTGCATTCTACTCCTACTTGA 59.549 47.826 0.00 0.00 0.00 3.02
130 131 3.738281 CGGGTGCATTCTACTCCTACTTG 60.738 52.174 0.00 0.00 0.00 3.16
131 132 2.431057 CGGGTGCATTCTACTCCTACTT 59.569 50.000 0.00 0.00 0.00 2.24
132 133 2.032620 CGGGTGCATTCTACTCCTACT 58.967 52.381 0.00 0.00 0.00 2.57
133 134 1.068741 CCGGGTGCATTCTACTCCTAC 59.931 57.143 0.00 0.00 0.00 3.18
134 135 1.410004 CCGGGTGCATTCTACTCCTA 58.590 55.000 0.00 0.00 0.00 2.94
135 136 1.972660 GCCGGGTGCATTCTACTCCT 61.973 60.000 2.18 0.00 40.77 3.69
136 137 1.523938 GCCGGGTGCATTCTACTCC 60.524 63.158 2.18 0.00 40.77 3.85
137 138 0.811616 CAGCCGGGTGCATTCTACTC 60.812 60.000 22.48 0.00 44.83 2.59
138 139 1.221840 CAGCCGGGTGCATTCTACT 59.778 57.895 22.48 0.00 44.83 2.57
139 140 1.819632 CCAGCCGGGTGCATTCTAC 60.820 63.158 28.23 0.00 44.83 2.59
140 141 2.589540 CCAGCCGGGTGCATTCTA 59.410 61.111 28.23 0.00 44.83 2.10
149 150 0.243636 GACAAATTCAACCAGCCGGG 59.756 55.000 2.18 0.00 44.81 5.73
150 151 0.243636 GGACAAATTCAACCAGCCGG 59.756 55.000 0.00 0.00 38.77 6.13
151 152 0.958091 TGGACAAATTCAACCAGCCG 59.042 50.000 0.00 0.00 0.00 5.52
152 153 1.335872 CGTGGACAAATTCAACCAGCC 60.336 52.381 0.00 0.00 32.89 4.85
153 154 1.336755 ACGTGGACAAATTCAACCAGC 59.663 47.619 0.00 0.00 32.89 4.85
154 155 3.813166 AGTACGTGGACAAATTCAACCAG 59.187 43.478 0.00 0.00 32.89 4.00
155 156 3.562141 CAGTACGTGGACAAATTCAACCA 59.438 43.478 0.00 0.00 0.00 3.67
156 157 3.810941 TCAGTACGTGGACAAATTCAACC 59.189 43.478 0.00 0.00 0.00 3.77
157 158 4.607557 CGTCAGTACGTGGACAAATTCAAC 60.608 45.833 14.43 0.00 44.21 3.18
158 159 3.491639 CGTCAGTACGTGGACAAATTCAA 59.508 43.478 14.43 0.00 44.21 2.69
159 160 3.054166 CGTCAGTACGTGGACAAATTCA 58.946 45.455 14.43 0.00 44.21 2.57
160 161 3.700130 CGTCAGTACGTGGACAAATTC 57.300 47.619 14.43 0.00 44.21 2.17
172 173 3.587797 TCAAATCCTGGACGTCAGTAC 57.412 47.619 18.91 0.00 41.83 2.73
173 174 3.830178 TCTTCAAATCCTGGACGTCAGTA 59.170 43.478 18.91 1.93 41.83 2.74
174 175 2.632996 TCTTCAAATCCTGGACGTCAGT 59.367 45.455 18.91 0.00 41.83 3.41
175 176 3.319137 TCTTCAAATCCTGGACGTCAG 57.681 47.619 18.91 12.39 43.00 3.51
176 177 3.399330 GTTCTTCAAATCCTGGACGTCA 58.601 45.455 18.91 2.63 0.00 4.35
177 178 2.412089 CGTTCTTCAAATCCTGGACGTC 59.588 50.000 7.13 7.13 0.00 4.34
178 179 2.036733 TCGTTCTTCAAATCCTGGACGT 59.963 45.455 0.00 0.00 0.00 4.34
179 180 2.683968 TCGTTCTTCAAATCCTGGACG 58.316 47.619 0.00 0.00 0.00 4.79
180 181 4.613850 GCTTTCGTTCTTCAAATCCTGGAC 60.614 45.833 0.00 0.00 0.00 4.02
181 182 3.502211 GCTTTCGTTCTTCAAATCCTGGA 59.498 43.478 0.00 0.00 0.00 3.86
182 183 3.253188 TGCTTTCGTTCTTCAAATCCTGG 59.747 43.478 0.00 0.00 0.00 4.45
183 184 4.488126 TGCTTTCGTTCTTCAAATCCTG 57.512 40.909 0.00 0.00 0.00 3.86
184 185 5.006386 AGATGCTTTCGTTCTTCAAATCCT 58.994 37.500 0.00 0.00 0.00 3.24
185 186 5.091431 CAGATGCTTTCGTTCTTCAAATCC 58.909 41.667 0.00 0.00 0.00 3.01
186 187 5.931532 TCAGATGCTTTCGTTCTTCAAATC 58.068 37.500 0.00 0.00 0.00 2.17
187 188 5.947228 TCAGATGCTTTCGTTCTTCAAAT 57.053 34.783 0.00 0.00 0.00 2.32
188 189 5.749596 TTCAGATGCTTTCGTTCTTCAAA 57.250 34.783 0.00 0.00 0.00 2.69
189 190 5.947228 ATTCAGATGCTTTCGTTCTTCAA 57.053 34.783 0.00 0.00 0.00 2.69
190 191 5.947228 AATTCAGATGCTTTCGTTCTTCA 57.053 34.783 0.00 0.00 0.00 3.02
191 192 7.080724 AGAAAATTCAGATGCTTTCGTTCTTC 58.919 34.615 0.00 0.00 33.86 2.87
192 193 6.974965 AGAAAATTCAGATGCTTTCGTTCTT 58.025 32.000 0.00 0.00 33.86 2.52
193 194 6.205464 TGAGAAAATTCAGATGCTTTCGTTCT 59.795 34.615 0.00 0.00 33.86 3.01
194 195 6.304208 GTGAGAAAATTCAGATGCTTTCGTTC 59.696 38.462 0.00 0.00 33.86 3.95
195 196 6.016777 AGTGAGAAAATTCAGATGCTTTCGTT 60.017 34.615 0.00 0.00 33.86 3.85
196 197 5.471456 AGTGAGAAAATTCAGATGCTTTCGT 59.529 36.000 0.00 0.00 33.86 3.85
197 198 5.936054 AGTGAGAAAATTCAGATGCTTTCG 58.064 37.500 0.00 0.00 33.86 3.46
198 199 7.650903 ACAAAGTGAGAAAATTCAGATGCTTTC 59.349 33.333 0.00 0.00 0.00 2.62
199 200 7.495055 ACAAAGTGAGAAAATTCAGATGCTTT 58.505 30.769 0.00 0.00 0.00 3.51
200 201 7.014038 AGACAAAGTGAGAAAATTCAGATGCTT 59.986 33.333 0.00 0.00 0.00 3.91
201 202 6.489361 AGACAAAGTGAGAAAATTCAGATGCT 59.511 34.615 0.00 0.00 0.00 3.79
202 203 6.675987 AGACAAAGTGAGAAAATTCAGATGC 58.324 36.000 0.00 0.00 0.00 3.91
203 204 7.533222 CGAAGACAAAGTGAGAAAATTCAGATG 59.467 37.037 0.00 0.00 0.00 2.90
204 205 7.579726 CGAAGACAAAGTGAGAAAATTCAGAT 58.420 34.615 0.00 0.00 0.00 2.90
205 206 6.511767 GCGAAGACAAAGTGAGAAAATTCAGA 60.512 38.462 0.00 0.00 0.00 3.27
206 207 5.622856 GCGAAGACAAAGTGAGAAAATTCAG 59.377 40.000 0.00 0.00 0.00 3.02
207 208 5.065859 TGCGAAGACAAAGTGAGAAAATTCA 59.934 36.000 0.00 0.00 0.00 2.57
208 209 5.396654 GTGCGAAGACAAAGTGAGAAAATTC 59.603 40.000 0.00 0.00 0.00 2.17
209 210 5.273944 GTGCGAAGACAAAGTGAGAAAATT 58.726 37.500 0.00 0.00 0.00 1.82
210 211 4.552767 CGTGCGAAGACAAAGTGAGAAAAT 60.553 41.667 0.00 0.00 0.00 1.82
211 212 3.242284 CGTGCGAAGACAAAGTGAGAAAA 60.242 43.478 0.00 0.00 0.00 2.29
212 213 2.284150 CGTGCGAAGACAAAGTGAGAAA 59.716 45.455 0.00 0.00 0.00 2.52
213 214 1.858458 CGTGCGAAGACAAAGTGAGAA 59.142 47.619 0.00 0.00 0.00 2.87
214 215 1.202371 ACGTGCGAAGACAAAGTGAGA 60.202 47.619 0.00 0.00 0.00 3.27
215 216 1.190323 GACGTGCGAAGACAAAGTGAG 59.810 52.381 0.00 0.00 0.00 3.51
216 217 1.205657 GACGTGCGAAGACAAAGTGA 58.794 50.000 0.00 0.00 0.00 3.41
217 218 0.927537 TGACGTGCGAAGACAAAGTG 59.072 50.000 0.00 0.00 0.00 3.16
218 219 1.865865 ATGACGTGCGAAGACAAAGT 58.134 45.000 0.00 0.00 0.00 2.66
219 220 2.949714 AATGACGTGCGAAGACAAAG 57.050 45.000 0.00 0.00 0.00 2.77
220 221 2.852901 GCAAATGACGTGCGAAGACAAA 60.853 45.455 0.00 0.00 31.20 2.83
221 222 1.333702 GCAAATGACGTGCGAAGACAA 60.334 47.619 0.00 0.00 31.20 3.18
222 223 0.234625 GCAAATGACGTGCGAAGACA 59.765 50.000 0.00 0.00 31.20 3.41
223 224 0.234625 TGCAAATGACGTGCGAAGAC 59.765 50.000 0.00 0.00 45.27 3.01
224 225 1.128507 GATGCAAATGACGTGCGAAGA 59.871 47.619 0.00 0.00 45.27 2.87
225 226 1.136000 TGATGCAAATGACGTGCGAAG 60.136 47.619 0.00 0.00 45.27 3.79
226 227 0.871057 TGATGCAAATGACGTGCGAA 59.129 45.000 0.00 0.00 45.27 4.70
227 228 0.165727 GTGATGCAAATGACGTGCGA 59.834 50.000 0.00 0.00 45.27 5.10
228 229 0.794229 GGTGATGCAAATGACGTGCG 60.794 55.000 0.00 0.00 45.27 5.34
229 230 0.523072 AGGTGATGCAAATGACGTGC 59.477 50.000 0.00 0.00 42.55 5.34
230 231 2.995466 AAGGTGATGCAAATGACGTG 57.005 45.000 0.00 0.00 0.00 4.49
231 232 4.320608 AAAAAGGTGATGCAAATGACGT 57.679 36.364 0.00 0.00 0.00 4.34
250 251 3.750639 ACGTGCGAAGACAAAGAAAAA 57.249 38.095 0.00 0.00 0.00 1.94
251 252 3.125487 TGAACGTGCGAAGACAAAGAAAA 59.875 39.130 0.00 0.00 0.00 2.29
252 253 2.673862 TGAACGTGCGAAGACAAAGAAA 59.326 40.909 0.00 0.00 0.00 2.52
253 254 2.272678 TGAACGTGCGAAGACAAAGAA 58.727 42.857 0.00 0.00 0.00 2.52
254 255 1.929230 TGAACGTGCGAAGACAAAGA 58.071 45.000 0.00 0.00 0.00 2.52
255 256 2.949714 ATGAACGTGCGAAGACAAAG 57.050 45.000 0.00 0.00 0.00 2.77
256 257 2.348125 CGAATGAACGTGCGAAGACAAA 60.348 45.455 0.00 0.00 0.00 2.83
257 258 1.191425 CGAATGAACGTGCGAAGACAA 59.809 47.619 0.00 0.00 0.00 3.18
258 259 0.781787 CGAATGAACGTGCGAAGACA 59.218 50.000 0.00 0.00 0.00 3.41
259 260 0.516524 GCGAATGAACGTGCGAAGAC 60.517 55.000 0.00 0.00 35.59 3.01
260 261 0.941936 TGCGAATGAACGTGCGAAGA 60.942 50.000 0.00 0.00 35.59 2.87
261 262 0.517132 CTGCGAATGAACGTGCGAAG 60.517 55.000 0.00 0.00 35.59 3.79
262 263 1.491127 CTGCGAATGAACGTGCGAA 59.509 52.632 0.00 0.00 35.59 4.70
263 264 3.010585 GCTGCGAATGAACGTGCGA 62.011 57.895 0.00 0.00 35.59 5.10
264 265 2.571611 GCTGCGAATGAACGTGCG 60.572 61.111 0.00 0.00 35.59 5.34
265 266 1.793613 GTGCTGCGAATGAACGTGC 60.794 57.895 0.00 0.00 36.28 5.34
266 267 1.154413 GGTGCTGCGAATGAACGTG 60.154 57.895 0.00 0.00 35.59 4.49
267 268 0.037697 TAGGTGCTGCGAATGAACGT 60.038 50.000 0.00 0.00 35.59 3.99
268 269 1.061131 CTTAGGTGCTGCGAATGAACG 59.939 52.381 0.00 0.00 0.00 3.95
269 270 2.346803 TCTTAGGTGCTGCGAATGAAC 58.653 47.619 0.00 0.00 0.00 3.18
270 271 2.760634 TCTTAGGTGCTGCGAATGAA 57.239 45.000 0.00 0.00 0.00 2.57
271 272 2.988010 ATCTTAGGTGCTGCGAATGA 57.012 45.000 0.00 0.00 0.00 2.57
272 273 5.163764 TGTTTTATCTTAGGTGCTGCGAATG 60.164 40.000 0.00 0.00 0.00 2.67
273 274 4.941263 TGTTTTATCTTAGGTGCTGCGAAT 59.059 37.500 0.00 0.00 0.00 3.34
274 275 4.320023 TGTTTTATCTTAGGTGCTGCGAA 58.680 39.130 0.00 0.00 0.00 4.70
275 276 3.932822 TGTTTTATCTTAGGTGCTGCGA 58.067 40.909 0.00 0.00 0.00 5.10
276 277 4.678509 TTGTTTTATCTTAGGTGCTGCG 57.321 40.909 0.00 0.00 0.00 5.18
277 278 5.801947 CACATTGTTTTATCTTAGGTGCTGC 59.198 40.000 0.00 0.00 0.00 5.25
278 279 6.913170 ACACATTGTTTTATCTTAGGTGCTG 58.087 36.000 0.00 0.00 0.00 4.41
279 280 7.524717 AACACATTGTTTTATCTTAGGTGCT 57.475 32.000 0.00 0.00 37.26 4.40
280 281 6.523201 CGAACACATTGTTTTATCTTAGGTGC 59.477 38.462 0.00 0.00 41.28 5.01
281 282 7.021196 CCGAACACATTGTTTTATCTTAGGTG 58.979 38.462 0.00 0.00 41.28 4.00
282 283 6.349033 GCCGAACACATTGTTTTATCTTAGGT 60.349 38.462 0.00 0.00 41.28 3.08
283 284 6.027749 GCCGAACACATTGTTTTATCTTAGG 58.972 40.000 0.00 0.00 41.28 2.69
284 285 6.607689 TGCCGAACACATTGTTTTATCTTAG 58.392 36.000 0.00 0.00 41.28 2.18
285 286 6.561737 TGCCGAACACATTGTTTTATCTTA 57.438 33.333 0.00 0.00 41.28 2.10
286 287 5.446143 TGCCGAACACATTGTTTTATCTT 57.554 34.783 0.00 0.00 41.28 2.40
287 288 5.415701 AGATGCCGAACACATTGTTTTATCT 59.584 36.000 0.00 0.00 41.28 1.98
288 289 5.640732 AGATGCCGAACACATTGTTTTATC 58.359 37.500 0.00 0.00 41.28 1.75
289 290 5.643379 AGATGCCGAACACATTGTTTTAT 57.357 34.783 0.00 0.00 41.28 1.40
290 291 5.218885 CAAGATGCCGAACACATTGTTTTA 58.781 37.500 0.00 0.00 41.28 1.52
291 292 4.050553 CAAGATGCCGAACACATTGTTTT 58.949 39.130 0.00 0.00 41.28 2.43
292 293 3.068024 ACAAGATGCCGAACACATTGTTT 59.932 39.130 0.00 0.00 41.28 2.83
293 294 2.622942 ACAAGATGCCGAACACATTGTT 59.377 40.909 0.00 0.00 44.37 2.83
294 295 2.226437 GACAAGATGCCGAACACATTGT 59.774 45.455 8.71 8.71 40.93 2.71
295 296 2.485426 AGACAAGATGCCGAACACATTG 59.515 45.455 0.00 0.00 34.64 2.82
296 297 2.783135 AGACAAGATGCCGAACACATT 58.217 42.857 0.00 0.00 0.00 2.71
297 298 2.479566 AGACAAGATGCCGAACACAT 57.520 45.000 0.00 0.00 0.00 3.21
298 299 2.143122 GAAGACAAGATGCCGAACACA 58.857 47.619 0.00 0.00 0.00 3.72
299 300 1.126846 CGAAGACAAGATGCCGAACAC 59.873 52.381 0.00 0.00 0.00 3.32
300 301 1.428448 CGAAGACAAGATGCCGAACA 58.572 50.000 0.00 0.00 0.00 3.18
301 302 0.095417 GCGAAGACAAGATGCCGAAC 59.905 55.000 0.00 0.00 0.00 3.95
302 303 0.320334 TGCGAAGACAAGATGCCGAA 60.320 50.000 0.00 0.00 0.00 4.30
303 304 1.014044 GTGCGAAGACAAGATGCCGA 61.014 55.000 0.00 0.00 0.00 5.54
304 305 1.421485 GTGCGAAGACAAGATGCCG 59.579 57.895 0.00 0.00 0.00 5.69
305 306 1.291877 ACGTGCGAAGACAAGATGCC 61.292 55.000 0.00 0.00 0.00 4.40
306 307 0.093705 GACGTGCGAAGACAAGATGC 59.906 55.000 0.00 0.00 0.00 3.91
307 308 0.363512 CGACGTGCGAAGACAAGATG 59.636 55.000 0.00 0.00 44.57 2.90
308 309 0.039437 ACGACGTGCGAAGACAAGAT 60.039 50.000 13.06 0.00 44.57 2.40
309 310 0.248743 AACGACGTGCGAAGACAAGA 60.249 50.000 0.00 0.00 44.57 3.02
310 311 0.575390 AAACGACGTGCGAAGACAAG 59.425 50.000 0.00 0.00 44.57 3.16
311 312 1.000884 AAAACGACGTGCGAAGACAA 58.999 45.000 0.00 0.00 44.57 3.18
312 313 1.000884 AAAAACGACGTGCGAAGACA 58.999 45.000 0.00 0.00 44.57 3.41
313 314 1.267186 ACAAAAACGACGTGCGAAGAC 60.267 47.619 0.00 0.00 44.57 3.01
314 315 1.000884 ACAAAAACGACGTGCGAAGA 58.999 45.000 0.00 0.00 44.57 2.87
315 316 1.805286 AACAAAAACGACGTGCGAAG 58.195 45.000 0.00 0.00 44.57 3.79
316 317 2.159680 AGAAACAAAAACGACGTGCGAA 60.160 40.909 0.00 0.00 44.57 4.70
317 318 1.394227 AGAAACAAAAACGACGTGCGA 59.606 42.857 0.00 0.00 44.57 5.10
319 320 1.843753 CCAGAAACAAAAACGACGTGC 59.156 47.619 0.00 0.00 0.00 5.34
320 321 2.843643 CACCAGAAACAAAAACGACGTG 59.156 45.455 0.00 0.00 0.00 4.49
321 322 2.743126 TCACCAGAAACAAAAACGACGT 59.257 40.909 0.00 0.00 0.00 4.34
322 323 3.350912 CTCACCAGAAACAAAAACGACG 58.649 45.455 0.00 0.00 0.00 5.12
323 324 3.105937 GCTCACCAGAAACAAAAACGAC 58.894 45.455 0.00 0.00 0.00 4.34
324 325 3.013921 AGCTCACCAGAAACAAAAACGA 58.986 40.909 0.00 0.00 0.00 3.85
325 326 3.420839 AGCTCACCAGAAACAAAAACG 57.579 42.857 0.00 0.00 0.00 3.60
326 327 6.306397 CAAAAAGCTCACCAGAAACAAAAAC 58.694 36.000 0.00 0.00 0.00 2.43
327 328 5.411053 CCAAAAAGCTCACCAGAAACAAAAA 59.589 36.000 0.00 0.00 0.00 1.94
328 329 4.934602 CCAAAAAGCTCACCAGAAACAAAA 59.065 37.500 0.00 0.00 0.00 2.44
329 330 4.502962 CCAAAAAGCTCACCAGAAACAAA 58.497 39.130 0.00 0.00 0.00 2.83
330 331 3.678529 GCCAAAAAGCTCACCAGAAACAA 60.679 43.478 0.00 0.00 0.00 2.83
331 332 2.159114 GCCAAAAAGCTCACCAGAAACA 60.159 45.455 0.00 0.00 0.00 2.83
332 333 2.473816 GCCAAAAAGCTCACCAGAAAC 58.526 47.619 0.00 0.00 0.00 2.78
333 334 1.412343 GGCCAAAAAGCTCACCAGAAA 59.588 47.619 0.00 0.00 0.00 2.52
334 335 1.039856 GGCCAAAAAGCTCACCAGAA 58.960 50.000 0.00 0.00 0.00 3.02
335 336 0.185901 AGGCCAAAAAGCTCACCAGA 59.814 50.000 5.01 0.00 0.00 3.86
336 337 1.043022 AAGGCCAAAAAGCTCACCAG 58.957 50.000 5.01 0.00 0.00 4.00
337 338 2.373335 TAAGGCCAAAAAGCTCACCA 57.627 45.000 5.01 0.00 0.00 4.17
338 339 2.094026 CCATAAGGCCAAAAAGCTCACC 60.094 50.000 5.01 0.00 0.00 4.02
339 340 2.562738 ACCATAAGGCCAAAAAGCTCAC 59.437 45.455 5.01 0.00 39.06 3.51
340 341 2.888212 ACCATAAGGCCAAAAAGCTCA 58.112 42.857 5.01 0.00 39.06 4.26
341 342 3.006859 ACAACCATAAGGCCAAAAAGCTC 59.993 43.478 5.01 0.00 39.06 4.09
342 343 2.972021 ACAACCATAAGGCCAAAAAGCT 59.028 40.909 5.01 0.00 39.06 3.74
356 357 7.706179 CGAAATAATGGAGCAAAATACAACCAT 59.294 33.333 0.00 0.00 39.38 3.55
370 371 6.072673 GGGTACATAAAGCCGAAATAATGGAG 60.073 42.308 0.00 0.00 0.00 3.86
372 373 5.048294 GGGGTACATAAAGCCGAAATAATGG 60.048 44.000 0.00 0.00 37.93 3.16
373 374 5.768164 AGGGGTACATAAAGCCGAAATAATG 59.232 40.000 0.00 0.00 37.93 1.90
393 394 6.598064 AGTCTGTGATTTCGTTAATAAAGGGG 59.402 38.462 0.00 0.00 0.00 4.79
426 427 3.523157 TGGATTCTCTCAGTTGGCCAATA 59.477 43.478 23.66 9.67 0.00 1.90
427 428 2.309755 TGGATTCTCTCAGTTGGCCAAT 59.690 45.455 23.66 8.06 0.00 3.16
428 429 1.704628 TGGATTCTCTCAGTTGGCCAA 59.295 47.619 16.05 16.05 0.00 4.52
429 430 1.361204 TGGATTCTCTCAGTTGGCCA 58.639 50.000 0.00 0.00 0.00 5.36
430 431 2.363683 CTTGGATTCTCTCAGTTGGCC 58.636 52.381 0.00 0.00 0.00 5.36
431 432 1.742268 GCTTGGATTCTCTCAGTTGGC 59.258 52.381 0.00 0.00 0.00 4.52
432 433 3.347077 AGCTTGGATTCTCTCAGTTGG 57.653 47.619 0.00 0.00 0.00 3.77
433 434 5.526846 GGAATAGCTTGGATTCTCTCAGTTG 59.473 44.000 7.47 0.00 34.36 3.16
434 435 5.679601 GGAATAGCTTGGATTCTCTCAGTT 58.320 41.667 7.47 0.00 34.36 3.16
435 436 4.202202 CGGAATAGCTTGGATTCTCTCAGT 60.202 45.833 7.47 0.00 34.36 3.41
436 437 4.202202 ACGGAATAGCTTGGATTCTCTCAG 60.202 45.833 7.47 0.00 34.36 3.35
437 438 3.706594 ACGGAATAGCTTGGATTCTCTCA 59.293 43.478 7.47 0.00 34.36 3.27
438 439 4.054671 CACGGAATAGCTTGGATTCTCTC 58.945 47.826 7.47 0.00 34.36 3.20
439 440 3.181461 CCACGGAATAGCTTGGATTCTCT 60.181 47.826 7.47 0.00 34.36 3.10
440 441 3.134458 CCACGGAATAGCTTGGATTCTC 58.866 50.000 7.47 0.00 34.36 2.87
441 442 2.158755 CCCACGGAATAGCTTGGATTCT 60.159 50.000 1.24 0.00 34.36 2.40
442 443 2.158813 TCCCACGGAATAGCTTGGATTC 60.159 50.000 1.24 0.49 33.34 2.52
443 444 1.843851 TCCCACGGAATAGCTTGGATT 59.156 47.619 1.24 0.00 0.00 3.01
444 445 1.507140 TCCCACGGAATAGCTTGGAT 58.493 50.000 1.24 0.00 0.00 3.41
445 446 1.281419 TTCCCACGGAATAGCTTGGA 58.719 50.000 1.24 0.00 36.71 3.53
446 447 2.122783 TTTCCCACGGAATAGCTTGG 57.877 50.000 0.00 0.00 41.71 3.61
454 455 3.952323 TGTTGTATGTTTTTCCCACGGAA 59.048 39.130 0.00 0.00 40.27 4.30
463 464 5.009210 ACGTACTGCCATGTTGTATGTTTTT 59.991 36.000 0.00 0.00 34.06 1.94
474 475 2.561419 ACTGACTTACGTACTGCCATGT 59.439 45.455 0.00 0.00 0.00 3.21
498 499 0.097499 CGTACGTGGTCATAGCGTCA 59.903 55.000 7.22 0.00 39.64 4.35
562 563 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
563 564 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
577 578 7.285629 AGACCAAATTACGTCTCATCTAGATGA 59.714 37.037 29.17 29.17 42.99 2.92
578 579 7.429633 AGACCAAATTACGTCTCATCTAGATG 58.570 38.462 24.32 24.32 45.40 2.90
579 580 7.589958 AGACCAAATTACGTCTCATCTAGAT 57.410 36.000 0.00 0.00 34.15 1.98
588 589 4.935808 GGTGAATGAGACCAAATTACGTCT 59.064 41.667 6.98 6.98 42.02 4.18
589 590 4.935808 AGGTGAATGAGACCAAATTACGTC 59.064 41.667 0.00 0.00 35.76 4.34
590 591 4.695455 CAGGTGAATGAGACCAAATTACGT 59.305 41.667 0.00 0.00 35.76 3.57
591 592 4.935205 TCAGGTGAATGAGACCAAATTACG 59.065 41.667 0.00 0.00 35.76 3.18
592 593 6.817765 TTCAGGTGAATGAGACCAAATTAC 57.182 37.500 0.00 0.00 35.76 1.89
593 594 7.831691 TTTTCAGGTGAATGAGACCAAATTA 57.168 32.000 0.00 0.00 35.76 1.40
594 595 6.729690 TTTTCAGGTGAATGAGACCAAATT 57.270 33.333 0.00 0.00 35.76 1.82
595 596 6.098124 TGTTTTTCAGGTGAATGAGACCAAAT 59.902 34.615 0.00 0.00 35.76 2.32
596 597 5.420421 TGTTTTTCAGGTGAATGAGACCAAA 59.580 36.000 0.00 0.00 35.76 3.28
597 598 4.952957 TGTTTTTCAGGTGAATGAGACCAA 59.047 37.500 0.00 0.00 35.76 3.67
598 599 4.531854 TGTTTTTCAGGTGAATGAGACCA 58.468 39.130 0.00 0.00 35.76 4.02
599 600 5.299279 TCTTGTTTTTCAGGTGAATGAGACC 59.701 40.000 0.00 0.00 33.54 3.85
600 601 6.377327 TCTTGTTTTTCAGGTGAATGAGAC 57.623 37.500 0.00 0.00 33.54 3.36
601 602 6.458206 CGTTCTTGTTTTTCAGGTGAATGAGA 60.458 38.462 0.00 0.00 33.54 3.27
602 603 5.682862 CGTTCTTGTTTTTCAGGTGAATGAG 59.317 40.000 0.00 0.00 33.54 2.90
603 604 5.449862 CCGTTCTTGTTTTTCAGGTGAATGA 60.450 40.000 0.00 0.00 33.54 2.57
604 605 4.739716 CCGTTCTTGTTTTTCAGGTGAATG 59.260 41.667 0.00 0.00 33.54 2.67
605 606 4.642885 TCCGTTCTTGTTTTTCAGGTGAAT 59.357 37.500 0.00 0.00 33.54 2.57
606 607 4.011023 TCCGTTCTTGTTTTTCAGGTGAA 58.989 39.130 0.00 0.00 0.00 3.18
607 608 3.611970 TCCGTTCTTGTTTTTCAGGTGA 58.388 40.909 0.00 0.00 0.00 4.02
608 609 4.568152 ATCCGTTCTTGTTTTTCAGGTG 57.432 40.909 0.00 0.00 0.00 4.00
609 610 5.127491 TGTATCCGTTCTTGTTTTTCAGGT 58.873 37.500 0.00 0.00 0.00 4.00
610 611 5.682943 TGTATCCGTTCTTGTTTTTCAGG 57.317 39.130 0.00 0.00 0.00 3.86
611 612 5.912955 GGTTGTATCCGTTCTTGTTTTTCAG 59.087 40.000 0.00 0.00 0.00 3.02
612 613 5.221087 GGGTTGTATCCGTTCTTGTTTTTCA 60.221 40.000 0.00 0.00 0.00 2.69
613 614 5.217393 GGGTTGTATCCGTTCTTGTTTTTC 58.783 41.667 0.00 0.00 0.00 2.29
614 615 4.645588 TGGGTTGTATCCGTTCTTGTTTTT 59.354 37.500 0.00 0.00 0.00 1.94
615 616 4.208746 TGGGTTGTATCCGTTCTTGTTTT 58.791 39.130 0.00 0.00 0.00 2.43
616 617 3.822940 TGGGTTGTATCCGTTCTTGTTT 58.177 40.909 0.00 0.00 0.00 2.83
617 618 3.495434 TGGGTTGTATCCGTTCTTGTT 57.505 42.857 0.00 0.00 0.00 2.83
618 619 3.713826 ATGGGTTGTATCCGTTCTTGT 57.286 42.857 0.00 0.00 0.00 3.16
619 620 5.364778 TGATATGGGTTGTATCCGTTCTTG 58.635 41.667 0.00 0.00 0.00 3.02
620 621 5.611374 CTGATATGGGTTGTATCCGTTCTT 58.389 41.667 0.00 0.00 0.00 2.52
621 622 4.503296 GCTGATATGGGTTGTATCCGTTCT 60.503 45.833 0.00 0.00 0.00 3.01
622 623 3.746492 GCTGATATGGGTTGTATCCGTTC 59.254 47.826 0.00 0.00 0.00 3.95
623 624 3.135712 TGCTGATATGGGTTGTATCCGTT 59.864 43.478 0.00 0.00 0.00 4.44
624 625 2.703536 TGCTGATATGGGTTGTATCCGT 59.296 45.455 0.00 0.00 0.00 4.69
625 626 3.067106 GTGCTGATATGGGTTGTATCCG 58.933 50.000 0.00 0.00 0.00 4.18
626 627 3.815401 GTGTGCTGATATGGGTTGTATCC 59.185 47.826 0.00 0.00 0.00 2.59
627 628 4.273480 GTGTGTGCTGATATGGGTTGTATC 59.727 45.833 0.00 0.00 0.00 2.24
628 629 4.199310 GTGTGTGCTGATATGGGTTGTAT 58.801 43.478 0.00 0.00 0.00 2.29
629 630 3.605634 GTGTGTGCTGATATGGGTTGTA 58.394 45.455 0.00 0.00 0.00 2.41
630 631 2.436417 GTGTGTGCTGATATGGGTTGT 58.564 47.619 0.00 0.00 0.00 3.32
631 632 1.398041 CGTGTGTGCTGATATGGGTTG 59.602 52.381 0.00 0.00 0.00 3.77
632 633 1.737838 CGTGTGTGCTGATATGGGTT 58.262 50.000 0.00 0.00 0.00 4.11
633 634 0.744414 GCGTGTGTGCTGATATGGGT 60.744 55.000 0.00 0.00 0.00 4.51
634 635 0.744057 TGCGTGTGTGCTGATATGGG 60.744 55.000 0.00 0.00 35.36 4.00
635 636 1.262417 GATGCGTGTGTGCTGATATGG 59.738 52.381 0.00 0.00 35.36 2.74
636 637 2.207590 AGATGCGTGTGTGCTGATATG 58.792 47.619 0.00 0.00 35.36 1.78
637 638 2.609427 AGATGCGTGTGTGCTGATAT 57.391 45.000 0.00 0.00 35.36 1.63
638 639 2.385013 AAGATGCGTGTGTGCTGATA 57.615 45.000 0.00 0.00 35.36 2.15
639 640 2.385013 TAAGATGCGTGTGTGCTGAT 57.615 45.000 0.00 0.00 35.36 2.90
640 641 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
641 642 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
642 643 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
643 644 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
644 645 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
645 646 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
646 647 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
647 648 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
648 649 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
649 650 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
650 651 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
651 652 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
652 653 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
653 654 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
654 655 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
655 656 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
656 657 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
657 658 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
658 659 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
659 660 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
660 661 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
661 662 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
662 663 7.514784 TCTTTTATAGCCATTGGATGTGATG 57.485 36.000 6.95 0.00 0.00 3.07
663 664 7.946219 TCATCTTTTATAGCCATTGGATGTGAT 59.054 33.333 6.95 0.00 33.39 3.06
664 665 7.289310 TCATCTTTTATAGCCATTGGATGTGA 58.711 34.615 6.95 0.00 33.39 3.58
665 666 7.514784 TCATCTTTTATAGCCATTGGATGTG 57.485 36.000 6.95 0.00 33.39 3.21
666 667 8.582437 CATTCATCTTTTATAGCCATTGGATGT 58.418 33.333 6.95 0.10 33.39 3.06
667 668 8.799367 TCATTCATCTTTTATAGCCATTGGATG 58.201 33.333 6.95 0.00 0.00 3.51
668 669 8.945195 TCATTCATCTTTTATAGCCATTGGAT 57.055 30.769 6.95 1.78 0.00 3.41
669 670 8.219868 TCTCATTCATCTTTTATAGCCATTGGA 58.780 33.333 6.95 0.00 0.00 3.53
670 671 8.295288 GTCTCATTCATCTTTTATAGCCATTGG 58.705 37.037 0.00 0.00 0.00 3.16
671 672 8.295288 GGTCTCATTCATCTTTTATAGCCATTG 58.705 37.037 0.00 0.00 0.00 2.82
672 673 8.000709 TGGTCTCATTCATCTTTTATAGCCATT 58.999 33.333 0.00 0.00 0.00 3.16
673 674 7.520798 TGGTCTCATTCATCTTTTATAGCCAT 58.479 34.615 0.00 0.00 0.00 4.40
674 675 6.899089 TGGTCTCATTCATCTTTTATAGCCA 58.101 36.000 0.00 0.00 0.00 4.75
675 676 7.807977 TTGGTCTCATTCATCTTTTATAGCC 57.192 36.000 0.00 0.00 0.00 3.93
684 685 9.690913 TGAGATTTAATTTGGTCTCATTCATCT 57.309 29.630 10.50 0.00 41.40 2.90
713 714 7.671302 AGAACAGTTTTGCTAGAACTCATCTA 58.329 34.615 0.00 0.00 39.71 1.98
714 715 6.529220 AGAACAGTTTTGCTAGAACTCATCT 58.471 36.000 0.00 0.00 42.48 2.90
715 716 6.793492 AGAACAGTTTTGCTAGAACTCATC 57.207 37.500 0.00 0.00 35.26 2.92
716 717 7.573968 AAAGAACAGTTTTGCTAGAACTCAT 57.426 32.000 0.00 0.00 35.26 2.90
717 718 7.391148 AAAAGAACAGTTTTGCTAGAACTCA 57.609 32.000 0.00 0.00 35.26 3.41
718 719 9.952188 ATAAAAAGAACAGTTTTGCTAGAACTC 57.048 29.630 0.00 0.00 35.26 3.01
722 723 8.789762 GGGTATAAAAAGAACAGTTTTGCTAGA 58.210 33.333 0.00 0.00 29.93 2.43
723 724 8.573035 TGGGTATAAAAAGAACAGTTTTGCTAG 58.427 33.333 0.00 0.00 29.93 3.42
724 725 8.354426 GTGGGTATAAAAAGAACAGTTTTGCTA 58.646 33.333 0.00 0.00 29.93 3.49
725 726 7.069455 AGTGGGTATAAAAAGAACAGTTTTGCT 59.931 33.333 0.00 0.00 29.93 3.91
726 727 7.207383 AGTGGGTATAAAAAGAACAGTTTTGC 58.793 34.615 0.00 0.00 29.93 3.68
727 728 9.673454 GTAGTGGGTATAAAAAGAACAGTTTTG 57.327 33.333 0.00 0.00 29.93 2.44
728 729 9.411189 TGTAGTGGGTATAAAAAGAACAGTTTT 57.589 29.630 0.00 0.00 33.00 2.43
729 730 8.843262 GTGTAGTGGGTATAAAAAGAACAGTTT 58.157 33.333 0.00 0.00 0.00 2.66
730 731 7.994334 TGTGTAGTGGGTATAAAAAGAACAGTT 59.006 33.333 0.00 0.00 0.00 3.16
731 732 7.511268 TGTGTAGTGGGTATAAAAAGAACAGT 58.489 34.615 0.00 0.00 0.00 3.55
732 733 7.972832 TGTGTAGTGGGTATAAAAAGAACAG 57.027 36.000 0.00 0.00 0.00 3.16
733 734 8.212312 TCTTGTGTAGTGGGTATAAAAAGAACA 58.788 33.333 0.00 0.00 0.00 3.18
734 735 8.501580 GTCTTGTGTAGTGGGTATAAAAAGAAC 58.498 37.037 0.00 0.00 0.00 3.01
735 736 8.434392 AGTCTTGTGTAGTGGGTATAAAAAGAA 58.566 33.333 0.00 0.00 0.00 2.52
736 737 7.970102 AGTCTTGTGTAGTGGGTATAAAAAGA 58.030 34.615 0.00 0.00 0.00 2.52
737 738 7.876068 TGAGTCTTGTGTAGTGGGTATAAAAAG 59.124 37.037 0.00 0.00 0.00 2.27
786 791 8.383318 ACGATTCTTGAGAAAAAGAAGATGAA 57.617 30.769 5.69 0.00 46.43 2.57
835 845 7.042254 GGATTGTTAACTTGACGTCTTGTAGTT 60.042 37.037 17.92 19.82 33.89 2.24
851 862 3.686016 TGGAGCCTTGAGGATTGTTAAC 58.314 45.455 0.06 0.00 37.39 2.01
915 934 0.036388 TTGCAGTGTAGGTAGCTGGC 60.036 55.000 4.27 1.44 0.00 4.85
935 959 7.047271 TGTTTTCTAAATTGCTTTGCTTCCTT 58.953 30.769 0.00 0.00 0.00 3.36
1068 1125 5.652014 TGGAGTAATAAGCAAACCATTGAGG 59.348 40.000 0.00 0.00 45.67 3.86
1101 1159 3.804325 ACCTGAATCGATGCAGATAAACG 59.196 43.478 31.47 17.20 34.06 3.60
1693 7420 1.302033 ACACGGCCTTGAGCTTCTG 60.302 57.895 17.43 0.00 43.05 3.02
1860 7650 7.540745 ACGCATTATTCTTTCCAAACATTGTAC 59.459 33.333 0.00 0.00 0.00 2.90
1864 7654 5.348451 GCACGCATTATTCTTTCCAAACATT 59.652 36.000 0.00 0.00 0.00 2.71
1955 7745 4.752661 TTAAAATGTGGGTACTTGACGC 57.247 40.909 0.00 0.00 41.35 5.19
1956 7746 6.674066 ACAATTAAAATGTGGGTACTTGACG 58.326 36.000 0.00 0.00 0.00 4.35
1999 7789 4.681978 ACAGCAGTCCGTTCGCCC 62.682 66.667 0.00 0.00 0.00 6.13
2096 7887 9.528018 GAAGTTAAACTTGAATGGATGTTTTCA 57.472 29.630 0.00 0.00 38.80 2.69
2097 7888 9.528018 TGAAGTTAAACTTGAATGGATGTTTTC 57.472 29.630 0.00 0.00 38.80 2.29
2132 7923 3.471244 TTTTGCCGGCGGTCGTTTG 62.471 57.895 28.82 0.00 37.11 2.93
2212 8015 1.122019 GGGATGATGACGCCTAGGGT 61.122 60.000 11.72 6.76 0.00 4.34
2231 8034 1.677637 GACCTCACCGGCTTAGGGAG 61.678 65.000 18.63 8.91 34.52 4.30
2269 8079 2.280186 GGGAGAGCGCATTACCCG 60.280 66.667 11.47 0.00 0.00 5.28
2400 12159 1.888436 GATGAGGAGTGTCGTGCCCA 61.888 60.000 0.00 0.00 0.00 5.36
2410 12169 2.441164 AGCGCGAGGATGAGGAGT 60.441 61.111 12.10 0.00 0.00 3.85
2533 12292 2.598632 GCAGAAGACGTGCGCAAGT 61.599 57.895 28.83 28.83 41.68 3.16
2579 12338 2.584064 CACTGCATCCCGGTGCTA 59.416 61.111 17.03 4.29 43.40 3.49
2585 12344 2.821366 GACCTGCACTGCATCCCG 60.821 66.667 3.64 0.00 38.13 5.14
2599 12358 1.081376 CACGACTGACACCTCGACC 60.081 63.158 5.06 0.00 33.96 4.79
2602 12361 1.210413 CTCCACGACTGACACCTCG 59.790 63.158 0.00 0.00 35.96 4.63
2605 12364 1.755393 AACCCTCCACGACTGACACC 61.755 60.000 0.00 0.00 0.00 4.16
2630 12389 3.269578 CCAGTCATTGTCATGGCCA 57.730 52.632 8.56 8.56 35.36 5.36
2650 12409 1.094785 GCGGTGTCATTGGCATTACT 58.905 50.000 0.00 0.00 0.00 2.24
2684 12443 0.310543 TTTGTTGCACCGACAGCATC 59.689 50.000 0.00 0.00 42.33 3.91
2688 12447 1.101049 AGGGTTTGTTGCACCGACAG 61.101 55.000 0.00 0.00 34.79 3.51
2689 12448 0.180642 TAGGGTTTGTTGCACCGACA 59.819 50.000 0.00 0.00 34.79 4.35
2690 12449 0.872388 CTAGGGTTTGTTGCACCGAC 59.128 55.000 0.00 0.00 34.79 4.79
2691 12450 0.250553 CCTAGGGTTTGTTGCACCGA 60.251 55.000 0.00 0.00 34.79 4.69
2692 12451 0.536460 ACCTAGGGTTTGTTGCACCG 60.536 55.000 14.81 0.00 34.79 4.94
2693 12452 1.244816 GACCTAGGGTTTGTTGCACC 58.755 55.000 14.81 0.00 35.25 5.01
2694 12453 1.244816 GGACCTAGGGTTTGTTGCAC 58.755 55.000 14.81 0.00 35.25 4.57
2695 12454 3.737702 GGACCTAGGGTTTGTTGCA 57.262 52.632 14.81 0.00 35.25 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.