Multiple sequence alignment - TraesCS2D01G260000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G260000 chr2D 100.000 3172 0 0 1 3172 316270114 316266943 0.000000e+00 5858.0
1 TraesCS2D01G260000 chr2D 93.407 273 18 0 2900 3172 389275457 389275185 3.810000e-109 405.0
2 TraesCS2D01G260000 chr2D 91.209 273 20 3 2900 3170 308525057 308524787 5.000000e-98 368.0
3 TraesCS2D01G260000 chr2D 78.467 274 53 6 2568 2839 21930697 21930966 1.170000e-39 174.0
4 TraesCS2D01G260000 chr2A 92.964 1947 73 29 771 2708 418983146 418985037 0.000000e+00 2778.0
5 TraesCS2D01G260000 chr2A 93.365 211 11 3 1 208 418975718 418975928 3.070000e-80 309.0
6 TraesCS2D01G260000 chr2A 91.716 169 14 0 360 528 418976931 418977099 5.290000e-58 235.0
7 TraesCS2D01G260000 chr2A 85.714 224 16 8 1 208 418976711 418976934 4.120000e-54 222.0
8 TraesCS2D01G260000 chr2A 93.284 134 9 0 360 493 418975925 418976058 6.940000e-47 198.0
9 TraesCS2D01G260000 chr2B 91.884 1688 58 27 715 2386 384110853 384109229 0.000000e+00 2285.0
10 TraesCS2D01G260000 chr2B 91.575 273 21 2 2900 3172 461089871 461089601 2.990000e-100 375.0
11 TraesCS2D01G260000 chr2B 89.247 279 17 2 2430 2708 384095712 384095447 1.410000e-88 337.0
12 TraesCS2D01G260000 chr2B 91.875 160 6 3 483 635 384111017 384110858 1.920000e-52 217.0
13 TraesCS2D01G260000 chr2B 95.349 129 6 0 369 497 384111163 384111035 4.150000e-49 206.0
14 TraesCS2D01G260000 chr2B 87.432 183 8 9 41 208 384111351 384111169 2.500000e-46 196.0
15 TraesCS2D01G260000 chr2B 83.140 172 11 12 202 362 322529259 322529095 1.190000e-29 141.0
16 TraesCS2D01G260000 chr2B 81.065 169 20 7 206 365 168309289 168309124 1.190000e-24 124.0
17 TraesCS2D01G260000 chr2B 81.287 171 17 8 206 365 391519159 391518993 1.190000e-24 124.0
18 TraesCS2D01G260000 chr2B 89.706 68 2 5 4 66 384111431 384111364 7.290000e-12 82.4
19 TraesCS2D01G260000 chr2B 95.000 40 1 1 2397 2436 384105419 384105381 9.500000e-06 62.1
20 TraesCS2D01G260000 chr6A 91.264 435 36 2 1623 2056 573020463 573020896 2.720000e-165 592.0
21 TraesCS2D01G260000 chr6A 94.220 173 10 0 1300 1472 573019591 573019763 6.750000e-67 265.0
22 TraesCS2D01G260000 chr6A 86.429 140 14 2 206 340 445828194 445828055 7.090000e-32 148.0
23 TraesCS2D01G260000 chr6A 82.036 167 19 4 204 362 574234895 574235058 7.140000e-27 132.0
24 TraesCS2D01G260000 chr6A 78.788 198 35 4 2634 2827 602762274 602762468 3.320000e-25 126.0
25 TraesCS2D01G260000 chr6A 91.803 61 5 0 665 725 563127955 563127895 5.640000e-13 86.1
26 TraesCS2D01G260000 chr6B 91.034 435 37 2 1623 2056 644382954 644383387 1.270000e-163 586.0
27 TraesCS2D01G260000 chr6B 94.118 170 10 0 1302 1471 644382221 644382390 3.140000e-65 259.0
28 TraesCS2D01G260000 chr6B 93.651 63 2 2 661 722 462737160 462737221 3.370000e-15 93.5
29 TraesCS2D01G260000 chr6D 89.738 458 41 5 1604 2056 428418128 428418584 5.900000e-162 580.0
30 TraesCS2D01G260000 chr6D 91.209 273 23 1 2900 3172 242224638 242224367 1.390000e-98 370.0
31 TraesCS2D01G260000 chr6D 94.857 175 9 0 1298 1472 428417323 428417497 1.120000e-69 274.0
32 TraesCS2D01G260000 chr6D 83.750 160 17 8 206 362 451079789 451079636 3.300000e-30 143.0
33 TraesCS2D01G260000 chr6D 90.769 65 2 3 649 712 464608167 464608228 2.030000e-12 84.2
34 TraesCS2D01G260000 chr1D 90.975 277 25 0 2896 3172 253390963 253390687 1.070000e-99 374.0
35 TraesCS2D01G260000 chr1D 81.421 183 20 5 191 362 247303449 247303270 1.530000e-28 137.0
36 TraesCS2D01G260000 chr4D 91.241 274 22 2 2900 3172 68444399 68444671 3.860000e-99 372.0
37 TraesCS2D01G260000 chr4D 84.431 167 19 6 203 367 63251326 63251487 1.180000e-34 158.0
38 TraesCS2D01G260000 chr4D 80.460 174 22 6 198 362 401792751 401792921 4.300000e-24 122.0
39 TraesCS2D01G260000 chr3D 90.614 277 25 1 2897 3172 588479488 588479764 1.800000e-97 366.0
40 TraesCS2D01G260000 chr3D 84.810 158 13 9 206 357 386439819 386439667 7.090000e-32 148.0
41 TraesCS2D01G260000 chr3D 80.105 191 31 7 2654 2841 47705897 47706083 5.520000e-28 135.0
42 TraesCS2D01G260000 chr3D 92.063 63 3 2 661 722 242013648 242013709 1.570000e-13 87.9
43 TraesCS2D01G260000 chr3D 92.063 63 3 2 661 722 242357422 242357483 1.570000e-13 87.9
44 TraesCS2D01G260000 chr7D 90.288 278 25 2 2896 3172 206214579 206214303 2.330000e-96 363.0
45 TraesCS2D01G260000 chr7D 96.491 57 2 0 665 721 85908432 85908376 9.370000e-16 95.3
46 TraesCS2D01G260000 chr7D 93.651 63 2 2 661 722 343075165 343075226 3.370000e-15 93.5
47 TraesCS2D01G260000 chr7D 93.443 61 1 3 665 723 350149372 350149431 1.570000e-13 87.9
48 TraesCS2D01G260000 chr7D 92.063 63 3 2 665 726 580814984 580815045 1.570000e-13 87.9
49 TraesCS2D01G260000 chr1A 90.476 273 26 0 2900 3172 223426385 223426113 8.360000e-96 361.0
50 TraesCS2D01G260000 chr1A 90.217 184 13 2 369 552 137733553 137733731 5.290000e-58 235.0
51 TraesCS2D01G260000 chr1A 86.364 220 15 4 4 208 137729918 137730137 3.180000e-55 226.0
52 TraesCS2D01G260000 chr1A 84.000 175 15 5 198 364 237748724 237748893 4.240000e-34 156.0
53 TraesCS2D01G260000 chr1A 81.283 187 18 11 189 363 74014224 74014405 5.520000e-28 135.0
54 TraesCS2D01G260000 chr4A 80.597 268 36 12 2568 2826 587203640 587203380 3.230000e-45 193.0
55 TraesCS2D01G260000 chr4B 77.972 286 47 9 2568 2842 378760141 378759861 7.040000e-37 165.0
56 TraesCS2D01G260000 chr3A 83.060 183 14 9 196 365 641872958 641872780 1.970000e-32 150.0
57 TraesCS2D01G260000 chr7B 80.583 206 24 9 206 400 404036912 404037112 9.170000e-31 145.0
58 TraesCS2D01G260000 chr7B 89.706 68 5 2 198 263 622244025 622244092 5.640000e-13 86.1
59 TraesCS2D01G260000 chr5D 82.081 173 16 10 200 362 528613539 528613372 1.980000e-27 134.0
60 TraesCS2D01G260000 chr5A 81.667 180 15 8 197 363 132597458 132597632 1.980000e-27 134.0
61 TraesCS2D01G260000 chr1B 79.006 181 17 13 198 374 557396626 557396789 1.560000e-18 104.0
62 TraesCS2D01G260000 chr7A 89.855 69 6 1 198 265 206711949 206712017 1.570000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G260000 chr2D 316266943 316270114 3171 True 5858.000000 5858 100.000000 1 3172 1 chr2D.!!$R2 3171
1 TraesCS2D01G260000 chr2A 418983146 418985037 1891 False 2778.000000 2778 92.964000 771 2708 1 chr2A.!!$F1 1937
2 TraesCS2D01G260000 chr2A 418975718 418977099 1381 False 241.000000 309 91.019750 1 528 4 chr2A.!!$F2 527
3 TraesCS2D01G260000 chr2B 384105381 384111431 6050 True 508.083333 2285 91.874333 4 2436 6 chr2B.!!$R6 2432
4 TraesCS2D01G260000 chr6A 573019591 573020896 1305 False 428.500000 592 92.742000 1300 2056 2 chr6A.!!$F3 756
5 TraesCS2D01G260000 chr6B 644382221 644383387 1166 False 422.500000 586 92.576000 1302 2056 2 chr6B.!!$F2 754
6 TraesCS2D01G260000 chr6D 428417323 428418584 1261 False 427.000000 580 92.297500 1298 2056 2 chr6D.!!$F2 758
7 TraesCS2D01G260000 chr1A 137729918 137733731 3813 False 230.500000 235 88.290500 4 552 2 chr1A.!!$F3 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 4959 0.111639 GTAACTGCCCCAAGTTCCCA 59.888 55.000 0.0 0.0 40.77 4.37 F
651 5164 1.273606 TGGACTCTGCTACAGTTGCTC 59.726 52.381 8.5 0.0 32.61 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1571 6099 0.471211 TGGACCGTCCCTCTCACTTT 60.471 55.0 15.24 0.00 35.03 2.66 R
2626 11611 0.316442 CATGAATGCGGCGCAGTAAG 60.316 55.0 38.27 24.26 43.65 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 123 5.934781 AGAAGAAGAAGACCAAGTCAATGT 58.065 37.500 0.00 0.00 34.60 2.71
81 127 4.013267 AGAAGACCAAGTCAATGTCCTG 57.987 45.455 0.00 0.00 34.60 3.86
208 267 5.752955 GGCACATTTTGTCACAAATTGTACT 59.247 36.000 23.71 5.91 0.00 2.73
209 268 6.074356 GGCACATTTTGTCACAAATTGTACTC 60.074 38.462 23.71 17.02 0.00 2.59
210 269 6.074356 GCACATTTTGTCACAAATTGTACTCC 60.074 38.462 23.71 12.76 0.00 3.85
211 270 6.420604 CACATTTTGTCACAAATTGTACTCCC 59.579 38.462 23.71 0.00 0.00 4.30
212 271 6.323739 ACATTTTGTCACAAATTGTACTCCCT 59.676 34.615 23.17 3.53 0.00 4.20
213 272 6.385649 TTTTGTCACAAATTGTACTCCCTC 57.614 37.500 3.17 0.00 0.00 4.30
214 273 4.015872 TGTCACAAATTGTACTCCCTCC 57.984 45.455 0.00 0.00 0.00 4.30
215 274 3.000727 GTCACAAATTGTACTCCCTCCG 58.999 50.000 0.00 0.00 0.00 4.63
216 275 2.635915 TCACAAATTGTACTCCCTCCGT 59.364 45.455 0.00 0.00 0.00 4.69
217 276 3.071892 TCACAAATTGTACTCCCTCCGTT 59.928 43.478 0.00 0.00 0.00 4.44
218 277 3.435671 CACAAATTGTACTCCCTCCGTTC 59.564 47.826 0.00 0.00 0.00 3.95
219 278 3.007635 CAAATTGTACTCCCTCCGTTCC 58.992 50.000 0.00 0.00 0.00 3.62
220 279 2.249309 ATTGTACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
221 280 2.905415 TTGTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
222 281 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
223 282 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
224 283 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
225 284 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
226 285 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
227 286 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
228 287 6.718454 TGTACTCCCTCCGTTCCTAAATATAG 59.282 42.308 0.00 0.00 0.00 1.31
252 311 8.924511 AGGTCTTTTAAGAGATTTCAACATGA 57.075 30.769 0.00 0.00 35.32 3.07
253 312 9.354673 AGGTCTTTTAAGAGATTTCAACATGAA 57.645 29.630 0.00 0.00 35.32 2.57
254 313 9.399403 GGTCTTTTAAGAGATTTCAACATGAAC 57.601 33.333 0.00 0.00 34.07 3.18
262 321 8.412608 AGAGATTTCAACATGAACTACATACG 57.587 34.615 0.00 0.00 35.89 3.06
263 322 7.492669 AGAGATTTCAACATGAACTACATACGG 59.507 37.037 0.00 0.00 35.89 4.02
264 323 7.327975 AGATTTCAACATGAACTACATACGGA 58.672 34.615 0.00 0.00 35.89 4.69
265 324 7.987458 AGATTTCAACATGAACTACATACGGAT 59.013 33.333 0.00 0.00 35.89 4.18
266 325 6.902224 TTCAACATGAACTACATACGGATG 57.098 37.500 5.94 5.94 37.46 3.51
267 326 6.403049 TTCAACATGAACTACATACGGATGT 58.597 36.000 19.12 19.12 39.44 3.06
268 327 7.102847 TCAACATGAACTACATACGGATGTA 57.897 36.000 19.32 19.32 44.77 2.29
269 328 7.722363 TCAACATGAACTACATACGGATGTAT 58.278 34.615 20.64 7.28 45.42 2.29
270 329 8.852135 TCAACATGAACTACATACGGATGTATA 58.148 33.333 20.64 8.48 45.42 1.47
271 330 8.912658 CAACATGAACTACATACGGATGTATAC 58.087 37.037 20.64 14.42 45.42 1.47
272 331 8.405418 ACATGAACTACATACGGATGTATACT 57.595 34.615 20.64 8.34 45.42 2.12
273 332 8.857098 ACATGAACTACATACGGATGTATACTT 58.143 33.333 20.64 12.05 45.42 2.24
274 333 9.692749 CATGAACTACATACGGATGTATACTTT 57.307 33.333 20.64 11.40 45.42 2.66
279 338 9.790344 ACTACATACGGATGTATACTTTAGAGT 57.210 33.333 20.64 10.71 45.42 3.24
281 340 8.461249 ACATACGGATGTATACTTTAGAGTGT 57.539 34.615 12.79 0.00 44.77 3.55
282 341 9.565090 ACATACGGATGTATACTTTAGAGTGTA 57.435 33.333 12.79 0.00 44.77 2.90
285 344 8.921353 ACGGATGTATACTTTAGAGTGTAGAT 57.079 34.615 4.17 0.49 36.57 1.98
286 345 9.352191 ACGGATGTATACTTTAGAGTGTAGATT 57.648 33.333 4.17 0.00 34.86 2.40
299 358 9.944376 TTAGAGTGTAGATTTACTCATTTTGCT 57.056 29.630 7.09 0.00 44.41 3.91
303 362 9.672673 AGTGTAGATTTACTCATTTTGCTATGT 57.327 29.630 0.00 0.00 0.00 2.29
312 371 9.542462 TTACTCATTTTGCTATGTATGTAGTCC 57.458 33.333 0.00 0.00 0.00 3.85
313 372 7.564793 ACTCATTTTGCTATGTATGTAGTCCA 58.435 34.615 0.00 0.00 0.00 4.02
314 373 8.213679 ACTCATTTTGCTATGTATGTAGTCCAT 58.786 33.333 0.00 0.00 37.58 3.41
315 374 9.710900 CTCATTTTGCTATGTATGTAGTCCATA 57.289 33.333 0.00 0.00 34.86 2.74
327 386 9.987272 TGTATGTAGTCCATATTGAAATCTCTG 57.013 33.333 0.00 0.00 38.29 3.35
331 390 9.958180 TGTAGTCCATATTGAAATCTCTGAAAA 57.042 29.630 0.00 0.00 0.00 2.29
334 393 9.171877 AGTCCATATTGAAATCTCTGAAAAGAC 57.828 33.333 0.00 0.00 0.00 3.01
335 394 9.171877 GTCCATATTGAAATCTCTGAAAAGACT 57.828 33.333 0.00 0.00 0.00 3.24
336 395 9.745018 TCCATATTGAAATCTCTGAAAAGACTT 57.255 29.630 0.00 0.00 0.00 3.01
356 415 8.406730 AGACTTATAGTATTTAGGAACGGAGG 57.593 38.462 0.00 0.00 0.00 4.30
357 416 7.450944 AGACTTATAGTATTTAGGAACGGAGGG 59.549 40.741 0.00 0.00 0.00 4.30
358 417 7.300658 ACTTATAGTATTTAGGAACGGAGGGA 58.699 38.462 0.00 0.00 0.00 4.20
359 418 7.450944 ACTTATAGTATTTAGGAACGGAGGGAG 59.549 40.741 0.00 0.00 0.00 4.30
360 419 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
361 420 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
362 421 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
397 3865 8.729805 TTTGTGCATATCATGACACTATTGTA 57.270 30.769 13.47 0.00 37.81 2.41
428 3896 8.984891 TTTATGCATTTCACTCAAGTAATTGG 57.015 30.769 3.54 0.00 0.00 3.16
438 3906 5.234329 CACTCAAGTAATTGGCAGGTATACG 59.766 44.000 2.65 0.00 0.00 3.06
485 4959 0.111639 GTAACTGCCCCAAGTTCCCA 59.888 55.000 0.00 0.00 40.77 4.37
627 5140 5.682869 TCGGTTATTATGTCGATCGTACAG 58.317 41.667 15.94 4.46 0.00 2.74
629 5142 5.562998 CGGTTATTATGTCGATCGTACAGAC 59.437 44.000 15.94 5.96 35.61 3.51
635 5148 2.161012 TGTCGATCGTACAGACTTGGAC 59.839 50.000 15.94 1.55 36.01 4.02
637 5150 2.676839 TCGATCGTACAGACTTGGACTC 59.323 50.000 15.94 0.00 35.89 3.36
638 5151 2.678836 CGATCGTACAGACTTGGACTCT 59.321 50.000 7.03 0.00 35.89 3.24
639 5152 3.486043 CGATCGTACAGACTTGGACTCTG 60.486 52.174 7.03 0.00 40.97 3.35
640 5153 1.540267 TCGTACAGACTTGGACTCTGC 59.460 52.381 0.00 0.00 39.08 4.26
641 5154 1.542030 CGTACAGACTTGGACTCTGCT 59.458 52.381 0.00 0.00 39.08 4.24
642 5155 2.747989 CGTACAGACTTGGACTCTGCTA 59.252 50.000 0.00 0.00 39.08 3.49
643 5156 3.426426 CGTACAGACTTGGACTCTGCTAC 60.426 52.174 0.00 0.00 39.08 3.58
644 5157 2.598565 ACAGACTTGGACTCTGCTACA 58.401 47.619 0.00 0.00 39.08 2.74
645 5158 2.560542 ACAGACTTGGACTCTGCTACAG 59.439 50.000 0.00 0.00 39.08 2.74
646 5159 2.560542 CAGACTTGGACTCTGCTACAGT 59.439 50.000 0.00 0.00 32.61 3.55
647 5160 3.006323 CAGACTTGGACTCTGCTACAGTT 59.994 47.826 0.00 0.00 32.61 3.16
648 5161 3.006323 AGACTTGGACTCTGCTACAGTTG 59.994 47.826 0.00 0.00 32.61 3.16
649 5162 2.072298 CTTGGACTCTGCTACAGTTGC 58.928 52.381 0.00 0.00 32.61 4.17
650 5163 1.342074 TGGACTCTGCTACAGTTGCT 58.658 50.000 8.50 0.00 32.61 3.91
651 5164 1.273606 TGGACTCTGCTACAGTTGCTC 59.726 52.381 8.50 0.00 32.61 4.26
652 5165 1.548269 GGACTCTGCTACAGTTGCTCT 59.452 52.381 8.50 0.00 32.61 4.09
653 5166 2.028567 GGACTCTGCTACAGTTGCTCTT 60.029 50.000 8.50 0.00 32.61 2.85
654 5167 3.193691 GGACTCTGCTACAGTTGCTCTTA 59.806 47.826 8.50 0.00 32.61 2.10
655 5168 4.142049 GGACTCTGCTACAGTTGCTCTTAT 60.142 45.833 8.50 0.00 32.61 1.73
656 5169 5.067936 GGACTCTGCTACAGTTGCTCTTATA 59.932 44.000 8.50 0.00 32.61 0.98
657 5170 6.239176 GGACTCTGCTACAGTTGCTCTTATAT 60.239 42.308 8.50 0.00 32.61 0.86
658 5171 7.040340 GGACTCTGCTACAGTTGCTCTTATATA 60.040 40.741 8.50 0.00 32.61 0.86
659 5172 7.881142 ACTCTGCTACAGTTGCTCTTATATAG 58.119 38.462 8.50 0.00 32.61 1.31
660 5173 7.504238 ACTCTGCTACAGTTGCTCTTATATAGT 59.496 37.037 8.50 0.00 32.61 2.12
661 5174 8.919777 TCTGCTACAGTTGCTCTTATATAGTA 57.080 34.615 8.50 0.00 32.61 1.82
662 5175 8.784994 TCTGCTACAGTTGCTCTTATATAGTAC 58.215 37.037 8.50 0.00 32.61 2.73
663 5176 8.693120 TGCTACAGTTGCTCTTATATAGTACT 57.307 34.615 8.50 0.00 0.00 2.73
664 5177 9.132923 TGCTACAGTTGCTCTTATATAGTACTT 57.867 33.333 0.00 0.00 0.00 2.24
704 5217 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
705 5218 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
706 5219 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
707 5220 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
708 5221 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
709 5222 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
710 5223 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
711 5224 9.294614 CTTATATTAGTTTACGGAGGGAGTACT 57.705 37.037 0.00 0.00 0.00 2.73
712 5225 9.646522 TTATATTAGTTTACGGAGGGAGTACTT 57.353 33.333 0.00 0.00 0.00 2.24
762 5278 6.325545 TGTCGGTCATAATAAGATGTACCCTT 59.674 38.462 0.00 0.00 0.00 3.95
767 5283 7.881751 GGTCATAATAAGATGTACCCTTAACCC 59.118 40.741 8.34 1.82 30.85 4.11
826 5342 1.300388 GCTTGGCTTGCACACCTTG 60.300 57.895 5.80 0.48 0.00 3.61
897 5413 5.702209 CCCAAAAGTGCAAGCAATTAAATCT 59.298 36.000 8.23 0.00 32.85 2.40
972 5488 3.552132 TCAACGCAGCCTATAAATCCA 57.448 42.857 0.00 0.00 0.00 3.41
1011 5532 3.419943 TCCATCTCATCTCATCTCCGAG 58.580 50.000 0.00 0.00 0.00 4.63
1205 5726 2.106683 GCCGGTTCAGTTCATCGGG 61.107 63.158 1.90 0.00 40.88 5.14
1494 6022 1.532505 CCTTCTTTTCCATCGCATGCG 60.533 52.381 33.61 33.61 41.35 4.73
1565 6093 2.320805 CACGAGATGCACCACAAAAG 57.679 50.000 0.00 0.00 0.00 2.27
1567 6095 2.485426 CACGAGATGCACCACAAAAGAT 59.515 45.455 0.00 0.00 0.00 2.40
1571 6099 5.240623 ACGAGATGCACCACAAAAGATAAAA 59.759 36.000 0.00 0.00 0.00 1.52
1593 6121 0.320508 GTGAGAGGGACGGTCCAAAC 60.321 60.000 27.32 17.05 38.64 2.93
1594 6122 1.295746 GAGAGGGACGGTCCAAACC 59.704 63.158 27.32 10.94 38.64 3.27
2113 7292 2.623416 CCTTAATTTGCCTCCCGATTCC 59.377 50.000 0.00 0.00 0.00 3.01
2176 7355 3.627395 AACTGAGGGTGCATATTCGAA 57.373 42.857 0.00 0.00 0.00 3.71
2199 7382 5.273944 ACATGTGCTCGTTTTCTTTCTTTC 58.726 37.500 0.00 0.00 0.00 2.62
2200 7383 4.287238 TGTGCTCGTTTTCTTTCTTTCC 57.713 40.909 0.00 0.00 0.00 3.13
2201 7384 3.066203 TGTGCTCGTTTTCTTTCTTTCCC 59.934 43.478 0.00 0.00 0.00 3.97
2343 7529 0.465460 GCTGGTGGTTCACAGGTTCA 60.465 55.000 0.38 0.00 35.86 3.18
2376 7562 1.107114 ACGCCACAACAATTTCACCA 58.893 45.000 0.00 0.00 0.00 4.17
2455 11440 1.890876 TTCATGGTTGTGAACTCCGG 58.109 50.000 0.00 0.00 33.41 5.14
2500 11485 3.243569 GGTCATCCAACGACTCCAGATAG 60.244 52.174 0.00 0.00 33.73 2.08
2519 11504 1.153369 ACCACTGGCCGATCGAATG 60.153 57.895 18.66 6.85 0.00 2.67
2572 11557 0.389948 GGACTCTAACCACACTGGCG 60.390 60.000 0.00 0.00 42.67 5.69
2575 11560 1.291877 CTCTAACCACACTGGCGCAC 61.292 60.000 10.83 0.00 42.67 5.34
2576 11561 2.281208 TAACCACACTGGCGCACC 60.281 61.111 10.83 0.00 42.67 5.01
2585 11570 2.909965 TGGCGCACCAAAACCCTC 60.910 61.111 10.83 0.00 45.37 4.30
2591 11576 1.901464 CACCAAAACCCTCCACCCG 60.901 63.158 0.00 0.00 0.00 5.28
2612 11597 0.386858 GCCTTCCGCGTTTTCTTTCC 60.387 55.000 4.92 0.00 0.00 3.13
2619 11604 1.327507 GCGTTTTCTTTCCGATGCAC 58.672 50.000 0.00 0.00 0.00 4.57
2620 11605 1.591248 CGTTTTCTTTCCGATGCACG 58.409 50.000 0.00 0.00 42.18 5.34
2621 11606 1.327507 GTTTTCTTTCCGATGCACGC 58.672 50.000 0.00 0.00 41.07 5.34
2622 11607 0.110419 TTTTCTTTCCGATGCACGCG 60.110 50.000 3.53 3.53 41.07 6.01
2623 11608 2.507322 TTTCTTTCCGATGCACGCGC 62.507 55.000 5.73 0.00 41.07 6.86
2624 11609 4.520846 CTTTCCGATGCACGCGCC 62.521 66.667 5.73 0.00 41.07 6.53
2630 11615 4.575245 GATGCACGCGCCGCTTAC 62.575 66.667 20.13 9.10 37.32 2.34
2678 11663 1.063649 GCAGCGGCTGACATTGATG 59.936 57.895 32.72 4.90 36.96 3.07
2681 11666 3.113745 CGGCTGACATTGATGCCC 58.886 61.111 11.44 0.00 42.15 5.36
2710 11695 3.854669 CGGAGAGAGGGCGGCATT 61.855 66.667 12.47 0.00 0.00 3.56
2711 11696 2.203126 GGAGAGAGGGCGGCATTG 60.203 66.667 12.47 0.00 0.00 2.82
2712 11697 2.203126 GAGAGAGGGCGGCATTGG 60.203 66.667 12.47 0.00 0.00 3.16
2713 11698 4.496336 AGAGAGGGCGGCATTGGC 62.496 66.667 12.47 0.00 40.13 4.52
2723 11708 3.799755 GCATTGGCCGACGTGACC 61.800 66.667 0.00 0.00 0.00 4.02
2724 11709 2.047274 CATTGGCCGACGTGACCT 60.047 61.111 0.00 0.00 0.00 3.85
2725 11710 2.100631 CATTGGCCGACGTGACCTC 61.101 63.158 0.00 0.00 0.00 3.85
2726 11711 2.283529 ATTGGCCGACGTGACCTCT 61.284 57.895 0.00 0.00 0.00 3.69
2727 11712 0.968901 ATTGGCCGACGTGACCTCTA 60.969 55.000 0.00 0.00 0.00 2.43
2728 11713 1.592400 TTGGCCGACGTGACCTCTAG 61.592 60.000 0.00 0.00 0.00 2.43
2729 11714 2.772691 GGCCGACGTGACCTCTAGG 61.773 68.421 0.00 0.00 42.17 3.02
2730 11715 2.799371 CCGACGTGACCTCTAGGC 59.201 66.667 0.00 0.00 39.32 3.93
2731 11716 2.044555 CCGACGTGACCTCTAGGCA 61.045 63.158 0.00 0.00 39.32 4.75
2732 11717 1.429825 CGACGTGACCTCTAGGCAG 59.570 63.158 0.00 0.00 39.32 4.85
2733 11718 1.139947 GACGTGACCTCTAGGCAGC 59.860 63.158 0.00 0.00 39.32 5.25
2734 11719 2.286127 GACGTGACCTCTAGGCAGCC 62.286 65.000 1.84 1.84 39.32 4.85
2735 11720 2.351244 CGTGACCTCTAGGCAGCCA 61.351 63.158 15.80 0.00 39.32 4.75
2736 11721 1.219393 GTGACCTCTAGGCAGCCAC 59.781 63.158 15.80 0.00 39.32 5.01
2737 11722 1.079256 TGACCTCTAGGCAGCCACT 59.921 57.895 15.80 0.00 39.32 4.00
2738 11723 1.260538 TGACCTCTAGGCAGCCACTG 61.261 60.000 15.80 2.88 39.32 3.66
2749 11734 2.180017 GCCACTGCTTCAATGCGG 59.820 61.111 0.00 0.00 44.34 5.69
2750 11735 2.879907 CCACTGCTTCAATGCGGG 59.120 61.111 0.00 0.00 43.17 6.13
2751 11736 2.180017 CACTGCTTCAATGCGGGC 59.820 61.111 0.00 0.00 43.17 6.13
2752 11737 3.434319 ACTGCTTCAATGCGGGCG 61.434 61.111 0.00 0.00 43.17 6.13
2753 11738 3.434319 CTGCTTCAATGCGGGCGT 61.434 61.111 0.00 0.00 35.80 5.68
2754 11739 2.046796 TGCTTCAATGCGGGCGTA 60.047 55.556 0.00 0.00 35.36 4.42
2755 11740 2.040213 CTGCTTCAATGCGGGCGTAG 62.040 60.000 0.00 0.00 35.80 3.51
2768 11753 4.808649 CGTAGCTTCCCGAGGAAC 57.191 61.111 0.00 0.94 36.71 3.62
2769 11754 1.141234 CGTAGCTTCCCGAGGAACC 59.859 63.158 0.00 0.00 36.71 3.62
2770 11755 1.601419 CGTAGCTTCCCGAGGAACCA 61.601 60.000 0.00 0.00 36.71 3.67
2771 11756 0.611714 GTAGCTTCCCGAGGAACCAA 59.388 55.000 0.00 0.00 36.71 3.67
2772 11757 0.611714 TAGCTTCCCGAGGAACCAAC 59.388 55.000 0.00 0.00 36.71 3.77
2773 11758 1.128188 AGCTTCCCGAGGAACCAACT 61.128 55.000 1.68 0.00 36.71 3.16
2774 11759 0.673956 GCTTCCCGAGGAACCAACTC 60.674 60.000 1.68 0.00 36.71 3.01
2775 11760 0.036294 CTTCCCGAGGAACCAACTCC 60.036 60.000 1.68 0.00 36.71 3.85
2776 11761 1.823169 TTCCCGAGGAACCAACTCCG 61.823 60.000 1.68 0.00 40.75 4.63
2777 11762 2.264794 CCGAGGAACCAACTCCGG 59.735 66.667 0.00 0.00 40.75 5.14
2778 11763 2.434359 CGAGGAACCAACTCCGGC 60.434 66.667 0.00 0.00 40.75 6.13
2779 11764 2.046217 GAGGAACCAACTCCGGCC 60.046 66.667 0.00 0.00 40.75 6.13
2780 11765 3.952628 GAGGAACCAACTCCGGCCG 62.953 68.421 21.04 21.04 40.75 6.13
2781 11766 4.011517 GGAACCAACTCCGGCCGA 62.012 66.667 30.73 12.25 0.00 5.54
2782 11767 2.267961 GAACCAACTCCGGCCGAT 59.732 61.111 30.73 9.03 0.00 4.18
2783 11768 2.046314 AACCAACTCCGGCCGATG 60.046 61.111 30.73 21.00 0.00 3.84
2784 11769 2.798148 GAACCAACTCCGGCCGATGT 62.798 60.000 30.73 21.73 0.00 3.06
2785 11770 2.819595 CCAACTCCGGCCGATGTG 60.820 66.667 30.73 18.18 0.00 3.21
2786 11771 3.499737 CAACTCCGGCCGATGTGC 61.500 66.667 30.73 0.00 0.00 4.57
2797 11782 2.325857 GATGTGCCGCATCGAAGC 59.674 61.111 1.95 1.73 43.75 3.86
2805 11790 3.567797 GCATCGAAGCGGGCTGAC 61.568 66.667 0.00 0.00 0.00 3.51
2806 11791 2.892425 CATCGAAGCGGGCTGACC 60.892 66.667 0.00 0.00 0.00 4.02
2807 11792 3.390521 ATCGAAGCGGGCTGACCA 61.391 61.111 0.00 0.00 40.22 4.02
2808 11793 2.735772 ATCGAAGCGGGCTGACCAT 61.736 57.895 0.00 0.00 40.22 3.55
2809 11794 2.650813 ATCGAAGCGGGCTGACCATC 62.651 60.000 0.00 0.00 40.22 3.51
2810 11795 2.514824 GAAGCGGGCTGACCATCC 60.515 66.667 0.00 0.00 40.22 3.51
2811 11796 4.115199 AAGCGGGCTGACCATCCC 62.115 66.667 0.00 0.00 40.22 3.85
2813 11798 4.115199 GCGGGCTGACCATCCCTT 62.115 66.667 0.00 0.00 40.41 3.95
2814 11799 2.190578 CGGGCTGACCATCCCTTC 59.809 66.667 0.00 0.00 40.41 3.46
2815 11800 2.190578 GGGCTGACCATCCCTTCG 59.809 66.667 0.00 0.00 39.46 3.79
2816 11801 2.514824 GGCTGACCATCCCTTCGC 60.515 66.667 0.00 0.00 35.26 4.70
2817 11802 2.514824 GCTGACCATCCCTTCGCC 60.515 66.667 0.00 0.00 0.00 5.54
2818 11803 3.036429 GCTGACCATCCCTTCGCCT 62.036 63.158 0.00 0.00 0.00 5.52
2819 11804 1.153289 CTGACCATCCCTTCGCCTG 60.153 63.158 0.00 0.00 0.00 4.85
2820 11805 2.190578 GACCATCCCTTCGCCTGG 59.809 66.667 0.00 0.00 34.84 4.45
2821 11806 4.115199 ACCATCCCTTCGCCTGGC 62.115 66.667 9.11 9.11 31.72 4.85
2822 11807 4.883354 CCATCCCTTCGCCTGGCC 62.883 72.222 14.12 0.00 0.00 5.36
2823 11808 3.801997 CATCCCTTCGCCTGGCCT 61.802 66.667 14.12 0.00 0.00 5.19
2824 11809 3.801997 ATCCCTTCGCCTGGCCTG 61.802 66.667 14.12 2.54 0.00 4.85
2836 11821 2.912714 GGCCTGGCCGTGGTTATA 59.087 61.111 24.16 0.00 39.62 0.98
2837 11822 1.454539 GGCCTGGCCGTGGTTATAT 59.545 57.895 24.16 0.00 39.62 0.86
2838 11823 0.688487 GGCCTGGCCGTGGTTATATA 59.312 55.000 24.16 0.00 39.62 0.86
2839 11824 1.338769 GGCCTGGCCGTGGTTATATAG 60.339 57.143 24.16 0.00 39.62 1.31
2840 11825 1.338769 GCCTGGCCGTGGTTATATAGG 60.339 57.143 7.66 5.38 0.00 2.57
2841 11826 1.975680 CCTGGCCGTGGTTATATAGGT 59.024 52.381 0.00 0.00 0.00 3.08
2842 11827 2.370849 CCTGGCCGTGGTTATATAGGTT 59.629 50.000 0.00 0.00 0.00 3.50
2843 11828 3.399330 CTGGCCGTGGTTATATAGGTTG 58.601 50.000 0.00 0.00 0.00 3.77
2844 11829 2.773087 TGGCCGTGGTTATATAGGTTGT 59.227 45.455 0.00 0.00 0.00 3.32
2845 11830 3.135994 GGCCGTGGTTATATAGGTTGTG 58.864 50.000 0.00 0.00 0.00 3.33
2846 11831 2.546789 GCCGTGGTTATATAGGTTGTGC 59.453 50.000 0.00 0.00 0.00 4.57
2847 11832 3.743269 GCCGTGGTTATATAGGTTGTGCT 60.743 47.826 0.00 0.00 0.00 4.40
2848 11833 4.448210 CCGTGGTTATATAGGTTGTGCTT 58.552 43.478 0.00 0.00 0.00 3.91
2849 11834 4.510340 CCGTGGTTATATAGGTTGTGCTTC 59.490 45.833 0.00 0.00 0.00 3.86
2850 11835 4.208460 CGTGGTTATATAGGTTGTGCTTCG 59.792 45.833 0.00 0.00 0.00 3.79
2851 11836 4.510340 GTGGTTATATAGGTTGTGCTTCGG 59.490 45.833 0.00 0.00 0.00 4.30
2852 11837 3.497262 GGTTATATAGGTTGTGCTTCGGC 59.503 47.826 0.00 0.00 42.19 5.54
2853 11838 1.865865 ATATAGGTTGTGCTTCGGCG 58.134 50.000 0.00 0.00 45.37 6.46
2854 11839 0.818938 TATAGGTTGTGCTTCGGCGA 59.181 50.000 4.99 4.99 45.37 5.54
2855 11840 0.036765 ATAGGTTGTGCTTCGGCGAA 60.037 50.000 22.33 22.33 45.37 4.70
2856 11841 0.669318 TAGGTTGTGCTTCGGCGAAG 60.669 55.000 37.80 37.80 45.37 3.79
2897 11882 4.127040 CGAGCTCCGCTGCACTCT 62.127 66.667 8.47 0.00 39.88 3.24
2898 11883 2.765356 CGAGCTCCGCTGCACTCTA 61.765 63.158 8.47 0.00 39.88 2.43
2899 11884 1.226831 GAGCTCCGCTGCACTCTAC 60.227 63.158 0.87 0.00 39.88 2.59
2900 11885 1.662438 GAGCTCCGCTGCACTCTACT 61.662 60.000 0.87 0.00 39.88 2.57
2901 11886 0.394488 AGCTCCGCTGCACTCTACTA 60.394 55.000 0.00 0.00 37.57 1.82
2902 11887 0.248702 GCTCCGCTGCACTCTACTAC 60.249 60.000 0.00 0.00 0.00 2.73
2903 11888 1.384525 CTCCGCTGCACTCTACTACT 58.615 55.000 0.00 0.00 0.00 2.57
2904 11889 1.746220 CTCCGCTGCACTCTACTACTT 59.254 52.381 0.00 0.00 0.00 2.24
2905 11890 1.472878 TCCGCTGCACTCTACTACTTG 59.527 52.381 0.00 0.00 0.00 3.16
2906 11891 1.202582 CCGCTGCACTCTACTACTTGT 59.797 52.381 0.00 0.00 0.00 3.16
2907 11892 2.254459 CGCTGCACTCTACTACTTGTG 58.746 52.381 0.00 0.00 0.00 3.33
2908 11893 2.095212 CGCTGCACTCTACTACTTGTGA 60.095 50.000 0.00 0.00 32.72 3.58
2909 11894 3.506810 GCTGCACTCTACTACTTGTGAG 58.493 50.000 0.00 0.00 32.72 3.51
2910 11895 3.057174 GCTGCACTCTACTACTTGTGAGT 60.057 47.826 0.00 0.00 37.45 3.41
2911 11896 4.559704 GCTGCACTCTACTACTTGTGAGTT 60.560 45.833 0.00 0.00 36.02 3.01
2912 11897 4.871513 TGCACTCTACTACTTGTGAGTTG 58.128 43.478 0.00 0.00 36.02 3.16
2913 11898 3.675698 GCACTCTACTACTTGTGAGTTGC 59.324 47.826 0.00 0.00 36.02 4.17
2914 11899 3.914966 CACTCTACTACTTGTGAGTTGCG 59.085 47.826 0.00 0.00 36.02 4.85
2915 11900 3.568853 ACTCTACTACTTGTGAGTTGCGT 59.431 43.478 0.00 0.00 35.25 5.24
2916 11901 4.037684 ACTCTACTACTTGTGAGTTGCGTT 59.962 41.667 0.00 0.00 35.25 4.84
2917 11902 4.295870 TCTACTACTTGTGAGTTGCGTTG 58.704 43.478 0.00 0.00 37.33 4.10
2918 11903 1.597663 ACTACTTGTGAGTTGCGTTGC 59.402 47.619 0.00 0.00 37.33 4.17
2919 11904 0.579630 TACTTGTGAGTTGCGTTGCG 59.420 50.000 0.00 0.00 37.33 4.85
2920 11905 1.087202 ACTTGTGAGTTGCGTTGCGA 61.087 50.000 0.00 0.00 29.87 5.10
2921 11906 0.235665 CTTGTGAGTTGCGTTGCGAT 59.764 50.000 0.00 0.00 0.00 4.58
2922 11907 0.660488 TTGTGAGTTGCGTTGCGATT 59.340 45.000 0.00 0.00 0.00 3.34
2923 11908 0.660488 TGTGAGTTGCGTTGCGATTT 59.340 45.000 0.00 0.00 0.00 2.17
2924 11909 1.064803 TGTGAGTTGCGTTGCGATTTT 59.935 42.857 0.00 0.00 0.00 1.82
2925 11910 1.708680 GTGAGTTGCGTTGCGATTTTC 59.291 47.619 0.00 0.00 0.00 2.29
2926 11911 1.327507 GAGTTGCGTTGCGATTTTCC 58.672 50.000 0.00 0.00 0.00 3.13
2927 11912 0.039527 AGTTGCGTTGCGATTTTCCC 60.040 50.000 0.00 0.00 0.00 3.97
2928 11913 1.006825 GTTGCGTTGCGATTTTCCCC 61.007 55.000 0.00 0.00 0.00 4.81
2929 11914 2.202427 GCGTTGCGATTTTCCCCG 60.202 61.111 0.00 0.00 0.00 5.73
2930 11915 2.682876 GCGTTGCGATTTTCCCCGA 61.683 57.895 0.00 0.00 0.00 5.14
2931 11916 1.870383 CGTTGCGATTTTCCCCGAA 59.130 52.632 0.00 0.00 0.00 4.30
2932 11917 0.238817 CGTTGCGATTTTCCCCGAAA 59.761 50.000 0.00 0.00 0.00 3.46
2933 11918 1.335142 CGTTGCGATTTTCCCCGAAAA 60.335 47.619 2.29 2.29 44.04 2.29
2934 11919 2.324860 GTTGCGATTTTCCCCGAAAAG 58.675 47.619 5.84 0.00 43.33 2.27
2935 11920 0.885196 TGCGATTTTCCCCGAAAAGG 59.115 50.000 5.84 2.28 43.33 3.11
2936 11921 1.170442 GCGATTTTCCCCGAAAAGGA 58.830 50.000 5.84 0.00 43.33 3.36
2937 11922 1.542472 GCGATTTTCCCCGAAAAGGAA 59.458 47.619 5.84 0.00 43.33 3.36
2938 11923 2.415491 GCGATTTTCCCCGAAAAGGAAG 60.415 50.000 5.84 0.00 43.33 3.46
2939 11924 2.163613 CGATTTTCCCCGAAAAGGAAGG 59.836 50.000 5.84 0.00 43.33 3.46
2940 11925 2.003937 TTTTCCCCGAAAAGGAAGGG 57.996 50.000 0.00 0.00 44.07 3.95
2941 11926 0.854908 TTTCCCCGAAAAGGAAGGGT 59.145 50.000 0.00 0.00 44.07 4.34
2942 11927 0.111639 TTCCCCGAAAAGGAAGGGTG 59.888 55.000 0.00 0.00 45.00 4.61
2943 11928 0.768997 TCCCCGAAAAGGAAGGGTGA 60.769 55.000 0.00 0.00 45.00 4.02
2944 11929 0.111639 CCCCGAAAAGGAAGGGTGAA 59.888 55.000 0.00 0.00 45.00 3.18
2945 11930 1.534729 CCCGAAAAGGAAGGGTGAAG 58.465 55.000 0.00 0.00 45.00 3.02
2946 11931 0.881796 CCGAAAAGGAAGGGTGAAGC 59.118 55.000 0.00 0.00 45.00 3.86
2947 11932 1.604604 CGAAAAGGAAGGGTGAAGCA 58.395 50.000 0.00 0.00 0.00 3.91
2948 11933 1.537202 CGAAAAGGAAGGGTGAAGCAG 59.463 52.381 0.00 0.00 0.00 4.24
2949 11934 2.587522 GAAAAGGAAGGGTGAAGCAGT 58.412 47.619 0.00 0.00 0.00 4.40
2950 11935 3.751518 GAAAAGGAAGGGTGAAGCAGTA 58.248 45.455 0.00 0.00 0.00 2.74
2951 11936 2.861147 AAGGAAGGGTGAAGCAGTAC 57.139 50.000 0.00 0.00 0.00 2.73
2952 11937 1.729586 AGGAAGGGTGAAGCAGTACA 58.270 50.000 0.00 0.00 0.00 2.90
2953 11938 1.625818 AGGAAGGGTGAAGCAGTACAG 59.374 52.381 0.00 0.00 0.00 2.74
2954 11939 1.348036 GGAAGGGTGAAGCAGTACAGT 59.652 52.381 0.00 0.00 0.00 3.55
2955 11940 2.565834 GGAAGGGTGAAGCAGTACAGTA 59.434 50.000 0.00 0.00 0.00 2.74
2956 11941 3.368531 GGAAGGGTGAAGCAGTACAGTAG 60.369 52.174 0.00 0.00 0.00 2.57
2957 11942 3.170991 AGGGTGAAGCAGTACAGTAGA 57.829 47.619 0.00 0.00 0.00 2.59
2958 11943 3.093057 AGGGTGAAGCAGTACAGTAGAG 58.907 50.000 0.00 0.00 0.00 2.43
2959 11944 3.090037 GGGTGAAGCAGTACAGTAGAGA 58.910 50.000 0.00 0.00 0.00 3.10
2960 11945 3.702045 GGGTGAAGCAGTACAGTAGAGAT 59.298 47.826 0.00 0.00 0.00 2.75
2961 11946 4.888239 GGGTGAAGCAGTACAGTAGAGATA 59.112 45.833 0.00 0.00 0.00 1.98
2962 11947 5.360144 GGGTGAAGCAGTACAGTAGAGATAA 59.640 44.000 0.00 0.00 0.00 1.75
2963 11948 6.460399 GGGTGAAGCAGTACAGTAGAGATAAG 60.460 46.154 0.00 0.00 0.00 1.73
2964 11949 6.095720 GGTGAAGCAGTACAGTAGAGATAAGT 59.904 42.308 0.00 0.00 0.00 2.24
2965 11950 7.282675 GGTGAAGCAGTACAGTAGAGATAAGTA 59.717 40.741 0.00 0.00 0.00 2.24
2966 11951 8.842280 GTGAAGCAGTACAGTAGAGATAAGTAT 58.158 37.037 0.00 0.00 0.00 2.12
2967 11952 9.409918 TGAAGCAGTACAGTAGAGATAAGTATT 57.590 33.333 0.00 0.00 0.00 1.89
2976 11961 8.968969 ACAGTAGAGATAAGTATTTTCTTCGGT 58.031 33.333 0.00 0.00 36.51 4.69
2977 11962 9.239002 CAGTAGAGATAAGTATTTTCTTCGGTG 57.761 37.037 0.00 0.00 36.51 4.94
2978 11963 9.186837 AGTAGAGATAAGTATTTTCTTCGGTGA 57.813 33.333 0.00 0.00 36.51 4.02
2979 11964 9.453325 GTAGAGATAAGTATTTTCTTCGGTGAG 57.547 37.037 0.00 0.00 36.51 3.51
2980 11965 8.294954 AGAGATAAGTATTTTCTTCGGTGAGA 57.705 34.615 0.00 0.00 36.51 3.27
2981 11966 8.750298 AGAGATAAGTATTTTCTTCGGTGAGAA 58.250 33.333 0.00 0.00 36.51 2.87
2982 11967 8.705048 AGATAAGTATTTTCTTCGGTGAGAAC 57.295 34.615 0.00 0.00 32.29 3.01
2983 11968 7.764901 AGATAAGTATTTTCTTCGGTGAGAACC 59.235 37.037 0.00 0.00 32.29 3.62
2984 11969 5.223449 AGTATTTTCTTCGGTGAGAACCA 57.777 39.130 0.00 0.00 35.50 3.67
2985 11970 5.617252 AGTATTTTCTTCGGTGAGAACCAA 58.383 37.500 0.00 0.00 35.50 3.67
2986 11971 5.701290 AGTATTTTCTTCGGTGAGAACCAAG 59.299 40.000 0.00 0.00 35.50 3.61
2987 11972 2.543777 TTCTTCGGTGAGAACCAAGG 57.456 50.000 0.00 0.00 34.66 3.61
2988 11973 1.420430 TCTTCGGTGAGAACCAAGGT 58.580 50.000 0.00 0.00 34.66 3.50
2989 11974 1.766496 TCTTCGGTGAGAACCAAGGTT 59.234 47.619 3.73 3.73 41.54 3.50
2990 11975 2.171870 TCTTCGGTGAGAACCAAGGTTT 59.828 45.455 5.87 0.00 38.60 3.27
2991 11976 3.388676 TCTTCGGTGAGAACCAAGGTTTA 59.611 43.478 5.87 0.00 38.60 2.01
2992 11977 4.041198 TCTTCGGTGAGAACCAAGGTTTAT 59.959 41.667 5.87 0.00 38.60 1.40
2993 11978 3.934068 TCGGTGAGAACCAAGGTTTATC 58.066 45.455 5.87 8.28 38.60 1.75
2994 11979 2.671396 CGGTGAGAACCAAGGTTTATCG 59.329 50.000 5.87 4.80 38.60 2.92
2995 11980 3.615592 CGGTGAGAACCAAGGTTTATCGA 60.616 47.826 5.87 0.00 38.60 3.59
2996 11981 4.320870 GGTGAGAACCAAGGTTTATCGAA 58.679 43.478 5.87 0.00 38.60 3.71
2997 11982 4.153655 GGTGAGAACCAAGGTTTATCGAAC 59.846 45.833 5.87 3.76 38.60 3.95
3008 11993 3.596214 GTTTATCGAACCAGAAGGAGCA 58.404 45.455 0.00 0.00 38.69 4.26
3009 11994 2.961526 TATCGAACCAGAAGGAGCAC 57.038 50.000 0.00 0.00 38.69 4.40
3010 11995 0.250513 ATCGAACCAGAAGGAGCACC 59.749 55.000 0.00 0.00 38.69 5.01
3011 11996 1.118965 TCGAACCAGAAGGAGCACCA 61.119 55.000 2.07 0.00 38.69 4.17
3012 11997 0.250295 CGAACCAGAAGGAGCACCAA 60.250 55.000 2.07 0.00 38.69 3.67
3013 11998 1.239347 GAACCAGAAGGAGCACCAAC 58.761 55.000 2.07 0.00 38.69 3.77
3014 11999 0.178990 AACCAGAAGGAGCACCAACC 60.179 55.000 2.07 0.00 38.69 3.77
3015 12000 1.352622 ACCAGAAGGAGCACCAACCA 61.353 55.000 2.07 0.00 38.69 3.67
3016 12001 0.178992 CCAGAAGGAGCACCAACCAA 60.179 55.000 2.07 0.00 38.94 3.67
3017 12002 1.691196 CAGAAGGAGCACCAACCAAA 58.309 50.000 2.07 0.00 38.94 3.28
3018 12003 1.338020 CAGAAGGAGCACCAACCAAAC 59.662 52.381 2.07 0.00 38.94 2.93
3019 12004 0.673985 GAAGGAGCACCAACCAAACC 59.326 55.000 2.07 0.00 38.94 3.27
3020 12005 0.759060 AAGGAGCACCAACCAAACCC 60.759 55.000 2.07 0.00 38.94 4.11
3021 12006 1.152546 GGAGCACCAACCAAACCCT 60.153 57.895 0.00 0.00 35.97 4.34
3022 12007 0.111639 GGAGCACCAACCAAACCCTA 59.888 55.000 0.00 0.00 35.97 3.53
3023 12008 1.534729 GAGCACCAACCAAACCCTAG 58.465 55.000 0.00 0.00 0.00 3.02
3024 12009 0.850784 AGCACCAACCAAACCCTAGT 59.149 50.000 0.00 0.00 0.00 2.57
3025 12010 0.958822 GCACCAACCAAACCCTAGTG 59.041 55.000 0.00 0.00 0.00 2.74
3026 12011 1.477923 GCACCAACCAAACCCTAGTGA 60.478 52.381 0.00 0.00 0.00 3.41
3027 12012 2.938838 CACCAACCAAACCCTAGTGAA 58.061 47.619 0.00 0.00 0.00 3.18
3028 12013 2.621526 CACCAACCAAACCCTAGTGAAC 59.378 50.000 0.00 0.00 0.00 3.18
3029 12014 2.242708 ACCAACCAAACCCTAGTGAACA 59.757 45.455 0.00 0.00 0.00 3.18
3030 12015 3.292460 CCAACCAAACCCTAGTGAACAA 58.708 45.455 0.00 0.00 0.00 2.83
3031 12016 3.067601 CCAACCAAACCCTAGTGAACAAC 59.932 47.826 0.00 0.00 0.00 3.32
3032 12017 3.655615 ACCAAACCCTAGTGAACAACA 57.344 42.857 0.00 0.00 0.00 3.33
3043 12028 2.558265 TGAACAACACATGCACACAC 57.442 45.000 0.00 0.00 0.00 3.82
3044 12029 1.815003 TGAACAACACATGCACACACA 59.185 42.857 0.00 0.00 0.00 3.72
3045 12030 2.229784 TGAACAACACATGCACACACAA 59.770 40.909 0.00 0.00 0.00 3.33
3046 12031 3.249091 GAACAACACATGCACACACAAA 58.751 40.909 0.00 0.00 0.00 2.83
3047 12032 3.309961 ACAACACATGCACACACAAAA 57.690 38.095 0.00 0.00 0.00 2.44
3048 12033 3.252400 ACAACACATGCACACACAAAAG 58.748 40.909 0.00 0.00 0.00 2.27
3049 12034 1.925229 ACACATGCACACACAAAAGC 58.075 45.000 0.00 0.00 0.00 3.51
3050 12035 1.204231 ACACATGCACACACAAAAGCA 59.796 42.857 0.00 0.00 41.73 3.91
3051 12036 2.269172 CACATGCACACACAAAAGCAA 58.731 42.857 0.00 0.00 40.76 3.91
3052 12037 2.671888 CACATGCACACACAAAAGCAAA 59.328 40.909 0.00 0.00 40.76 3.68
3053 12038 3.310227 CACATGCACACACAAAAGCAAAT 59.690 39.130 0.00 0.00 40.76 2.32
3054 12039 4.507021 CACATGCACACACAAAAGCAAATA 59.493 37.500 0.00 0.00 40.76 1.40
3055 12040 4.507388 ACATGCACACACAAAAGCAAATAC 59.493 37.500 0.00 0.00 40.76 1.89
3056 12041 4.383850 TGCACACACAAAAGCAAATACT 57.616 36.364 0.00 0.00 33.48 2.12
3057 12042 4.753233 TGCACACACAAAAGCAAATACTT 58.247 34.783 0.00 0.00 33.48 2.24
3058 12043 4.565962 TGCACACACAAAAGCAAATACTTG 59.434 37.500 0.00 0.00 33.48 3.16
3069 12054 2.327568 CAAATACTTGCACCCAAAGCG 58.672 47.619 0.00 0.00 33.85 4.68
3070 12055 0.887933 AATACTTGCACCCAAAGCGG 59.112 50.000 0.00 0.00 33.85 5.52
3079 12064 3.064324 CCAAAGCGGGCAAGAGGG 61.064 66.667 0.00 0.00 0.00 4.30
3080 12065 2.282462 CAAAGCGGGCAAGAGGGT 60.282 61.111 0.00 0.00 0.00 4.34
3081 12066 1.903404 CAAAGCGGGCAAGAGGGTT 60.903 57.895 0.00 0.00 0.00 4.11
3082 12067 1.903404 AAAGCGGGCAAGAGGGTTG 60.903 57.895 0.00 0.00 0.00 3.77
3083 12068 2.640581 AAAGCGGGCAAGAGGGTTGT 62.641 55.000 0.00 0.00 0.00 3.32
3084 12069 3.056328 GCGGGCAAGAGGGTTGTC 61.056 66.667 0.00 0.00 0.00 3.18
3085 12070 2.429930 CGGGCAAGAGGGTTGTCA 59.570 61.111 0.00 0.00 0.00 3.58
3086 12071 1.228124 CGGGCAAGAGGGTTGTCAA 60.228 57.895 0.00 0.00 0.00 3.18
3087 12072 0.609131 CGGGCAAGAGGGTTGTCAAT 60.609 55.000 0.00 0.00 0.00 2.57
3088 12073 1.177401 GGGCAAGAGGGTTGTCAATC 58.823 55.000 0.00 0.00 0.00 2.67
3089 12074 1.177401 GGCAAGAGGGTTGTCAATCC 58.823 55.000 6.78 6.78 0.00 3.01
3090 12075 1.177401 GCAAGAGGGTTGTCAATCCC 58.823 55.000 11.48 12.24 43.71 3.85
3091 12076 1.839424 CAAGAGGGTTGTCAATCCCC 58.161 55.000 11.48 7.18 44.40 4.81
3095 12080 1.455822 AGGGTTGTCAATCCCCTTGA 58.544 50.000 11.48 0.00 46.92 3.02
3096 12081 1.786441 AGGGTTGTCAATCCCCTTGAA 59.214 47.619 11.48 0.00 46.92 2.69
3097 12082 1.893137 GGGTTGTCAATCCCCTTGAAC 59.107 52.381 3.15 0.00 45.27 3.18
3098 12083 2.490902 GGGTTGTCAATCCCCTTGAACT 60.491 50.000 3.15 0.00 45.27 3.01
3099 12084 2.820197 GGTTGTCAATCCCCTTGAACTC 59.180 50.000 0.00 0.00 45.27 3.01
3100 12085 3.486383 GTTGTCAATCCCCTTGAACTCA 58.514 45.455 0.00 0.00 45.27 3.41
3101 12086 4.082125 GTTGTCAATCCCCTTGAACTCAT 58.918 43.478 0.00 0.00 45.27 2.90
3102 12087 4.387026 TGTCAATCCCCTTGAACTCATT 57.613 40.909 0.00 0.00 45.27 2.57
3103 12088 5.512942 TGTCAATCCCCTTGAACTCATTA 57.487 39.130 0.00 0.00 45.27 1.90
3104 12089 5.253330 TGTCAATCCCCTTGAACTCATTAC 58.747 41.667 0.00 0.00 45.27 1.89
3105 12090 5.014123 TGTCAATCCCCTTGAACTCATTACT 59.986 40.000 0.00 0.00 45.27 2.24
3106 12091 5.946377 GTCAATCCCCTTGAACTCATTACTT 59.054 40.000 0.00 0.00 45.27 2.24
3107 12092 5.945784 TCAATCCCCTTGAACTCATTACTTG 59.054 40.000 0.00 0.00 40.92 3.16
3108 12093 3.686016 TCCCCTTGAACTCATTACTTGC 58.314 45.455 0.00 0.00 0.00 4.01
3109 12094 3.073798 TCCCCTTGAACTCATTACTTGCA 59.926 43.478 0.00 0.00 0.00 4.08
3110 12095 3.826157 CCCCTTGAACTCATTACTTGCAA 59.174 43.478 0.00 0.00 0.00 4.08
3111 12096 4.082571 CCCCTTGAACTCATTACTTGCAAG 60.083 45.833 24.84 24.84 0.00 4.01
3112 12097 4.082571 CCCTTGAACTCATTACTTGCAAGG 60.083 45.833 29.18 13.31 46.39 3.61
3113 12098 5.947228 CTTGAACTCATTACTTGCAAGGA 57.053 39.130 29.18 20.21 0.00 3.36
3114 12099 6.506500 CTTGAACTCATTACTTGCAAGGAT 57.493 37.500 29.18 19.31 0.00 3.24
3115 12100 6.500684 TTGAACTCATTACTTGCAAGGATC 57.499 37.500 29.18 15.12 0.00 3.36
3116 12101 5.559770 TGAACTCATTACTTGCAAGGATCA 58.440 37.500 29.18 17.50 0.00 2.92
3117 12102 6.003326 TGAACTCATTACTTGCAAGGATCAA 58.997 36.000 29.18 17.13 0.00 2.57
3118 12103 6.489700 TGAACTCATTACTTGCAAGGATCAAA 59.510 34.615 29.18 15.16 0.00 2.69
3119 12104 7.177216 TGAACTCATTACTTGCAAGGATCAAAT 59.823 33.333 29.18 16.54 0.00 2.32
3120 12105 7.093322 ACTCATTACTTGCAAGGATCAAATC 57.907 36.000 29.18 0.00 0.00 2.17
3121 12106 6.888632 ACTCATTACTTGCAAGGATCAAATCT 59.111 34.615 29.18 8.41 0.00 2.40
3122 12107 7.395489 ACTCATTACTTGCAAGGATCAAATCTT 59.605 33.333 29.18 7.69 0.00 2.40
3123 12108 7.541162 TCATTACTTGCAAGGATCAAATCTTG 58.459 34.615 29.18 12.35 42.19 3.02
3124 12109 6.899393 TTACTTGCAAGGATCAAATCTTGT 57.101 33.333 29.18 7.79 41.56 3.16
3125 12110 7.994425 TTACTTGCAAGGATCAAATCTTGTA 57.006 32.000 29.18 6.81 41.56 2.41
3126 12111 8.579850 TTACTTGCAAGGATCAAATCTTGTAT 57.420 30.769 29.18 5.90 41.56 2.29
3127 12112 9.679661 TTACTTGCAAGGATCAAATCTTGTATA 57.320 29.630 29.18 4.93 41.56 1.47
3128 12113 8.218338 ACTTGCAAGGATCAAATCTTGTATAG 57.782 34.615 29.18 0.00 41.56 1.31
3129 12114 7.284034 ACTTGCAAGGATCAAATCTTGTATAGG 59.716 37.037 29.18 0.00 41.56 2.57
3130 12115 6.662755 TGCAAGGATCAAATCTTGTATAGGT 58.337 36.000 10.07 0.00 41.56 3.08
3131 12116 7.801104 TGCAAGGATCAAATCTTGTATAGGTA 58.199 34.615 10.07 0.00 41.56 3.08
3132 12117 7.933577 TGCAAGGATCAAATCTTGTATAGGTAG 59.066 37.037 10.07 0.00 41.56 3.18
3133 12118 8.150945 GCAAGGATCAAATCTTGTATAGGTAGA 58.849 37.037 10.07 0.00 41.56 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 260 2.249309 AGGAACGGAGGGAGTACAAT 57.751 50.000 0.00 0.00 0.00 2.71
227 286 8.924511 TCATGTTGAAATCTCTTAAAAGACCT 57.075 30.769 0.00 0.00 0.00 3.85
228 287 9.399403 GTTCATGTTGAAATCTCTTAAAAGACC 57.601 33.333 0.00 0.00 38.22 3.85
236 295 8.873830 CGTATGTAGTTCATGTTGAAATCTCTT 58.126 33.333 0.00 0.00 38.22 2.85
237 296 7.492669 CCGTATGTAGTTCATGTTGAAATCTCT 59.507 37.037 0.00 0.00 38.22 3.10
238 297 7.491372 TCCGTATGTAGTTCATGTTGAAATCTC 59.509 37.037 0.00 0.00 38.22 2.75
239 298 7.327975 TCCGTATGTAGTTCATGTTGAAATCT 58.672 34.615 0.00 0.00 38.22 2.40
240 299 7.534085 TCCGTATGTAGTTCATGTTGAAATC 57.466 36.000 0.00 0.00 38.22 2.17
241 300 7.552687 ACATCCGTATGTAGTTCATGTTGAAAT 59.447 33.333 0.00 0.00 44.66 2.17
242 301 6.876789 ACATCCGTATGTAGTTCATGTTGAAA 59.123 34.615 0.00 0.00 44.66 2.69
243 302 6.403049 ACATCCGTATGTAGTTCATGTTGAA 58.597 36.000 0.00 0.00 44.66 2.69
244 303 5.972935 ACATCCGTATGTAGTTCATGTTGA 58.027 37.500 0.00 0.00 44.66 3.18
255 314 9.565090 ACACTCTAAAGTATACATCCGTATGTA 57.435 33.333 3.10 3.10 42.01 2.29
256 315 8.461249 ACACTCTAAAGTATACATCCGTATGT 57.539 34.615 5.50 0.00 40.86 2.29
260 319 8.921353 ATCTACACTCTAAAGTATACATCCGT 57.079 34.615 5.50 0.00 33.25 4.69
273 332 9.944376 AGCAAAATGAGTAAATCTACACTCTAA 57.056 29.630 3.65 0.00 41.46 2.10
277 336 9.672673 ACATAGCAAAATGAGTAAATCTACACT 57.327 29.630 1.26 0.00 0.00 3.55
286 345 9.542462 GGACTACATACATAGCAAAATGAGTAA 57.458 33.333 1.26 0.00 0.00 2.24
287 346 8.700973 TGGACTACATACATAGCAAAATGAGTA 58.299 33.333 1.26 0.00 0.00 2.59
288 347 7.564793 TGGACTACATACATAGCAAAATGAGT 58.435 34.615 1.26 0.00 0.00 3.41
289 348 8.613060 ATGGACTACATACATAGCAAAATGAG 57.387 34.615 1.26 0.00 38.26 2.90
301 360 9.987272 CAGAGATTTCAATATGGACTACATACA 57.013 33.333 0.00 0.00 44.41 2.29
305 364 9.958180 TTTTCAGAGATTTCAATATGGACTACA 57.042 29.630 0.00 0.00 0.00 2.74
308 367 9.171877 GTCTTTTCAGAGATTTCAATATGGACT 57.828 33.333 0.00 0.00 0.00 3.85
309 368 9.171877 AGTCTTTTCAGAGATTTCAATATGGAC 57.828 33.333 0.00 0.00 0.00 4.02
310 369 9.745018 AAGTCTTTTCAGAGATTTCAATATGGA 57.255 29.630 0.00 0.00 0.00 3.41
330 389 8.858094 CCTCCGTTCCTAAATACTATAAGTCTT 58.142 37.037 0.00 0.00 0.00 3.01
331 390 7.450944 CCCTCCGTTCCTAAATACTATAAGTCT 59.549 40.741 0.00 0.00 0.00 3.24
332 391 7.449704 TCCCTCCGTTCCTAAATACTATAAGTC 59.550 40.741 0.00 0.00 0.00 3.01
333 392 7.300658 TCCCTCCGTTCCTAAATACTATAAGT 58.699 38.462 0.00 0.00 0.00 2.24
334 393 7.450944 ACTCCCTCCGTTCCTAAATACTATAAG 59.549 40.741 0.00 0.00 0.00 1.73
335 394 7.300658 ACTCCCTCCGTTCCTAAATACTATAA 58.699 38.462 0.00 0.00 0.00 0.98
336 395 6.856757 ACTCCCTCCGTTCCTAAATACTATA 58.143 40.000 0.00 0.00 0.00 1.31
337 396 5.713807 ACTCCCTCCGTTCCTAAATACTAT 58.286 41.667 0.00 0.00 0.00 2.12
338 397 5.134725 ACTCCCTCCGTTCCTAAATACTA 57.865 43.478 0.00 0.00 0.00 1.82
339 398 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
340 399 7.715266 ATATACTCCCTCCGTTCCTAAATAC 57.285 40.000 0.00 0.00 0.00 1.89
341 400 7.731688 ACAATATACTCCCTCCGTTCCTAAATA 59.268 37.037 0.00 0.00 0.00 1.40
342 401 6.557633 ACAATATACTCCCTCCGTTCCTAAAT 59.442 38.462 0.00 0.00 0.00 1.40
343 402 5.901276 ACAATATACTCCCTCCGTTCCTAAA 59.099 40.000 0.00 0.00 0.00 1.85
344 403 5.461327 ACAATATACTCCCTCCGTTCCTAA 58.539 41.667 0.00 0.00 0.00 2.69
345 404 5.070823 ACAATATACTCCCTCCGTTCCTA 57.929 43.478 0.00 0.00 0.00 2.94
346 405 3.924922 ACAATATACTCCCTCCGTTCCT 58.075 45.455 0.00 0.00 0.00 3.36
347 406 4.684484 AACAATATACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
348 407 6.402456 ACTAACAATATACTCCCTCCGTTC 57.598 41.667 0.00 0.00 0.00 3.95
349 408 6.803366 AACTAACAATATACTCCCTCCGTT 57.197 37.500 0.00 0.00 0.00 4.44
350 409 6.803366 AAACTAACAATATACTCCCTCCGT 57.197 37.500 0.00 0.00 0.00 4.69
351 410 7.011109 CACAAAACTAACAATATACTCCCTCCG 59.989 40.741 0.00 0.00 0.00 4.63
352 411 7.201705 GCACAAAACTAACAATATACTCCCTCC 60.202 40.741 0.00 0.00 0.00 4.30
353 412 7.335924 TGCACAAAACTAACAATATACTCCCTC 59.664 37.037 0.00 0.00 0.00 4.30
354 413 7.172342 TGCACAAAACTAACAATATACTCCCT 58.828 34.615 0.00 0.00 0.00 4.20
355 414 7.385778 TGCACAAAACTAACAATATACTCCC 57.614 36.000 0.00 0.00 0.00 4.30
397 3865 6.040842 ACTTGAGTGAAATGCATAAAACCACT 59.959 34.615 14.81 14.81 36.27 4.00
428 3896 2.351726 CCAAAGTGAAGCGTATACCTGC 59.648 50.000 0.00 0.00 0.00 4.85
438 3906 2.307934 TGTTTTGGCCAAAGTGAAGC 57.692 45.000 28.79 12.10 0.00 3.86
485 4959 2.560105 TGCATCAGCTACATATCTCGCT 59.440 45.455 0.00 0.00 42.74 4.93
567 5079 6.866480 ACATGGCAATTCAGGTGTATAAAAG 58.134 36.000 0.00 0.00 30.01 2.27
620 5133 1.540267 GCAGAGTCCAAGTCTGTACGA 59.460 52.381 12.15 0.00 45.24 3.43
627 5140 3.321497 CAACTGTAGCAGAGTCCAAGTC 58.679 50.000 2.91 0.00 35.18 3.01
629 5142 2.072298 GCAACTGTAGCAGAGTCCAAG 58.928 52.381 2.91 0.00 35.18 3.61
635 5148 7.881142 ACTATATAAGAGCAACTGTAGCAGAG 58.119 38.462 2.91 0.00 35.18 3.35
637 5150 8.788806 AGTACTATATAAGAGCAACTGTAGCAG 58.211 37.037 0.00 0.00 37.52 4.24
638 5151 8.693120 AGTACTATATAAGAGCAACTGTAGCA 57.307 34.615 0.00 0.00 0.00 3.49
678 5191 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
679 5192 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
680 5193 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
681 5194 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
682 5195 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
683 5196 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
684 5197 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
685 5198 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
686 5199 9.646522 AAGTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
688 5201 9.819754 ATAAGTACTCCCTCCGTAAACTAATAT 57.180 33.333 0.00 0.00 0.00 1.28
689 5202 9.646522 AATAAGTACTCCCTCCGTAAACTAATA 57.353 33.333 0.00 0.00 0.00 0.98
690 5203 8.544687 AATAAGTACTCCCTCCGTAAACTAAT 57.455 34.615 0.00 0.00 0.00 1.73
691 5204 7.961326 AATAAGTACTCCCTCCGTAAACTAA 57.039 36.000 0.00 0.00 0.00 2.24
692 5205 9.125026 CTTAATAAGTACTCCCTCCGTAAACTA 57.875 37.037 0.00 0.00 0.00 2.24
693 5206 7.836183 TCTTAATAAGTACTCCCTCCGTAAACT 59.164 37.037 0.00 0.00 0.00 2.66
694 5207 8.000780 TCTTAATAAGTACTCCCTCCGTAAAC 57.999 38.462 0.00 0.00 0.00 2.01
695 5208 8.593945 TTCTTAATAAGTACTCCCTCCGTAAA 57.406 34.615 0.00 0.00 0.00 2.01
696 5209 8.593945 TTTCTTAATAAGTACTCCCTCCGTAA 57.406 34.615 0.00 0.00 0.00 3.18
697 5210 8.636213 CATTTCTTAATAAGTACTCCCTCCGTA 58.364 37.037 0.00 0.00 0.00 4.02
698 5211 7.343833 TCATTTCTTAATAAGTACTCCCTCCGT 59.656 37.037 0.00 0.00 0.00 4.69
699 5212 7.652507 GTCATTTCTTAATAAGTACTCCCTCCG 59.347 40.741 0.00 0.00 0.00 4.63
700 5213 7.932491 GGTCATTTCTTAATAAGTACTCCCTCC 59.068 40.741 0.00 0.00 0.00 4.30
701 5214 7.932491 GGGTCATTTCTTAATAAGTACTCCCTC 59.068 40.741 0.00 0.00 0.00 4.30
702 5215 7.404980 TGGGTCATTTCTTAATAAGTACTCCCT 59.595 37.037 0.00 0.00 0.00 4.20
703 5216 7.571025 TGGGTCATTTCTTAATAAGTACTCCC 58.429 38.462 0.00 0.00 0.00 4.30
704 5217 9.628500 ATTGGGTCATTTCTTAATAAGTACTCC 57.372 33.333 0.00 0.00 0.00 3.85
709 5222 9.675464 TTCGTATTGGGTCATTTCTTAATAAGT 57.325 29.630 0.00 0.00 0.00 2.24
713 5226 8.966868 ACATTTCGTATTGGGTCATTTCTTAAT 58.033 29.630 0.00 0.00 0.00 1.40
767 5283 2.362369 ACGGGTCTCCAGCCATCTG 61.362 63.158 0.00 0.00 40.64 2.90
777 5293 1.808411 TTGCAGAATTCACGGGTCTC 58.192 50.000 8.44 0.00 0.00 3.36
778 5294 2.489329 CAATTGCAGAATTCACGGGTCT 59.511 45.455 8.44 0.00 28.65 3.85
826 5342 4.073200 GCTGTGGGTGGCATTGGC 62.073 66.667 2.73 2.73 40.13 4.52
827 5343 3.384532 GGCTGTGGGTGGCATTGG 61.385 66.667 0.00 0.00 0.00 3.16
828 5344 1.985662 ATGGCTGTGGGTGGCATTG 60.986 57.895 0.00 0.00 46.32 2.82
829 5345 1.985662 CATGGCTGTGGGTGGCATT 60.986 57.895 0.00 0.00 46.32 3.56
897 5413 1.610624 GGAACGTGCATTCCAAGGAGA 60.611 52.381 13.21 0.00 46.49 3.71
944 5460 2.500369 GCTGCGTTGATGTGCACG 60.500 61.111 13.13 0.00 35.90 5.34
945 5461 1.298157 TAGGCTGCGTTGATGTGCAC 61.298 55.000 10.75 10.75 35.90 4.57
947 5463 1.581934 TATAGGCTGCGTTGATGTGC 58.418 50.000 0.00 0.00 0.00 4.57
972 5488 0.818040 GAAGCCTCCGTTGGTGTTGT 60.818 55.000 0.00 0.00 0.00 3.32
1011 5532 3.007398 AGCTATCTCGGATTGATGGTTCC 59.993 47.826 0.00 0.00 0.00 3.62
1481 6009 1.260297 CGAATAACGCATGCGATGGAA 59.740 47.619 43.72 23.60 37.99 3.53
1494 6022 4.941873 AGGTCATTCCAGGAAACGAATAAC 59.058 41.667 5.81 0.00 39.02 1.89
1571 6099 0.471211 TGGACCGTCCCTCTCACTTT 60.471 55.000 15.24 0.00 35.03 2.66
1593 6121 7.117812 ACACATAGTATTTCTCGTCACTTTTGG 59.882 37.037 0.00 0.00 0.00 3.28
1594 6122 8.018677 ACACATAGTATTTCTCGTCACTTTTG 57.981 34.615 0.00 0.00 0.00 2.44
2081 7260 6.321181 GGAGGCAAATTAAGGAACACATGATA 59.679 38.462 0.00 0.00 0.00 2.15
2176 7355 4.900635 AAGAAAGAAAACGAGCACATGT 57.099 36.364 0.00 0.00 0.00 3.21
2201 7384 7.125659 AGGTCATTAACATGAAAATTAAGGGGG 59.874 37.037 0.00 0.00 41.30 5.40
2436 11421 1.142060 ACCGGAGTTCACAACCATGAA 59.858 47.619 9.46 0.00 36.23 2.57
2455 11440 1.860800 CGCCAACGGTTTTGGTACAAC 60.861 52.381 4.99 0.00 41.53 3.32
2479 11464 2.969628 ATCTGGAGTCGTTGGATGAC 57.030 50.000 0.00 0.00 34.40 3.06
2500 11485 1.144057 ATTCGATCGGCCAGTGGTC 59.856 57.895 16.41 7.54 0.00 4.02
2519 11504 7.150783 AGCAGTGTCCTAGAAAATTTCATTC 57.849 36.000 8.55 0.00 0.00 2.67
2551 11536 1.279271 GCCAGTGTGGTTAGAGTCCAT 59.721 52.381 0.00 0.00 40.46 3.41
2572 11557 2.207229 GGGTGGAGGGTTTTGGTGC 61.207 63.158 0.00 0.00 0.00 5.01
2575 11560 2.989253 GCGGGTGGAGGGTTTTGG 60.989 66.667 0.00 0.00 0.00 3.28
2576 11561 3.361977 CGCGGGTGGAGGGTTTTG 61.362 66.667 0.00 0.00 0.00 2.44
2596 11581 1.195900 CATCGGAAAGAAAACGCGGAA 59.804 47.619 12.47 0.00 0.00 4.30
2598 11583 0.793104 GCATCGGAAAGAAAACGCGG 60.793 55.000 12.47 0.00 0.00 6.46
2601 11586 1.591248 CGTGCATCGGAAAGAAAACG 58.409 50.000 0.00 0.00 35.71 3.60
2625 11610 2.023320 GAATGCGGCGCAGTAAGC 59.977 61.111 38.27 21.39 43.65 3.09
2626 11611 0.316442 CATGAATGCGGCGCAGTAAG 60.316 55.000 38.27 24.26 43.65 2.34
2627 11612 1.720894 CATGAATGCGGCGCAGTAA 59.279 52.632 38.27 30.97 43.65 2.24
2628 11613 2.822758 GCATGAATGCGGCGCAGTA 61.823 57.895 38.27 26.32 43.65 2.74
2629 11614 4.183686 GCATGAATGCGGCGCAGT 62.184 61.111 38.27 37.05 43.65 4.40
2668 11653 2.607411 ATCGCGGGGCATCAATGTCA 62.607 55.000 6.13 0.00 33.08 3.58
2681 11666 3.758088 CTCTCCGGTCACATCGCGG 62.758 68.421 6.13 0.00 0.00 6.46
2708 11693 0.968901 TAGAGGTCACGTCGGCCAAT 60.969 55.000 2.24 2.34 0.00 3.16
2709 11694 1.592400 CTAGAGGTCACGTCGGCCAA 61.592 60.000 2.24 0.00 0.00 4.52
2710 11695 2.034532 TAGAGGTCACGTCGGCCA 59.965 61.111 2.24 0.00 0.00 5.36
2711 11696 2.772691 CCTAGAGGTCACGTCGGCC 61.773 68.421 0.00 0.00 0.00 6.13
2712 11697 2.799371 CCTAGAGGTCACGTCGGC 59.201 66.667 0.00 0.00 0.00 5.54
2713 11698 1.994507 CTGCCTAGAGGTCACGTCGG 61.995 65.000 0.00 0.00 37.57 4.79
2714 11699 1.429825 CTGCCTAGAGGTCACGTCG 59.570 63.158 0.00 0.00 37.57 5.12
2715 11700 1.139947 GCTGCCTAGAGGTCACGTC 59.860 63.158 0.00 0.00 37.57 4.34
2716 11701 2.352032 GGCTGCCTAGAGGTCACGT 61.352 63.158 12.43 0.00 37.57 4.49
2717 11702 2.351244 TGGCTGCCTAGAGGTCACG 61.351 63.158 21.03 0.00 37.57 4.35
2718 11703 1.219393 GTGGCTGCCTAGAGGTCAC 59.781 63.158 21.03 2.80 37.57 3.67
2719 11704 1.079256 AGTGGCTGCCTAGAGGTCA 59.921 57.895 21.03 0.00 37.57 4.02
2720 11705 1.519719 CAGTGGCTGCCTAGAGGTC 59.480 63.158 21.03 1.99 37.57 3.85
2721 11706 3.719121 CAGTGGCTGCCTAGAGGT 58.281 61.111 21.03 0.00 37.57 3.85
2732 11717 2.180017 CCGCATTGAAGCAGTGGC 59.820 61.111 0.00 0.00 41.61 5.01
2733 11718 2.879907 CCCGCATTGAAGCAGTGG 59.120 61.111 0.00 0.00 0.00 4.00
2734 11719 2.180017 GCCCGCATTGAAGCAGTG 59.820 61.111 0.00 0.00 0.00 3.66
2735 11720 2.796483 TACGCCCGCATTGAAGCAGT 62.796 55.000 0.00 0.00 0.00 4.40
2736 11721 2.040213 CTACGCCCGCATTGAAGCAG 62.040 60.000 0.00 0.00 0.00 4.24
2737 11722 2.046796 TACGCCCGCATTGAAGCA 60.047 55.556 0.00 0.00 0.00 3.91
2738 11723 2.709475 CTACGCCCGCATTGAAGC 59.291 61.111 0.00 0.00 0.00 3.86
2739 11724 1.369091 AAGCTACGCCCGCATTGAAG 61.369 55.000 0.00 0.00 0.00 3.02
2740 11725 1.366111 GAAGCTACGCCCGCATTGAA 61.366 55.000 0.00 0.00 0.00 2.69
2741 11726 1.813753 GAAGCTACGCCCGCATTGA 60.814 57.895 0.00 0.00 0.00 2.57
2742 11727 2.709475 GAAGCTACGCCCGCATTG 59.291 61.111 0.00 0.00 0.00 2.82
2743 11728 2.513897 GGAAGCTACGCCCGCATT 60.514 61.111 0.00 0.00 0.00 3.56
2744 11729 4.547367 GGGAAGCTACGCCCGCAT 62.547 66.667 3.71 0.00 34.00 4.73
2748 11733 4.222847 CCTCGGGAAGCTACGCCC 62.223 72.222 8.76 8.76 41.11 6.13
2749 11734 2.718073 TTCCTCGGGAAGCTACGCC 61.718 63.158 1.68 0.00 36.71 5.68
2750 11735 1.518792 GTTCCTCGGGAAGCTACGC 60.519 63.158 5.71 0.00 42.88 4.42
2751 11736 4.808649 GTTCCTCGGGAAGCTACG 57.191 61.111 5.71 0.00 42.88 3.51
2756 11741 0.036294 GGAGTTGGTTCCTCGGGAAG 60.036 60.000 5.71 0.00 42.88 3.46
2757 11742 1.823169 CGGAGTTGGTTCCTCGGGAA 61.823 60.000 1.68 1.68 39.66 3.97
2758 11743 2.280552 CGGAGTTGGTTCCTCGGGA 61.281 63.158 0.00 0.00 34.96 5.14
2759 11744 2.264794 CGGAGTTGGTTCCTCGGG 59.735 66.667 0.00 0.00 34.96 5.14
2760 11745 2.264794 CCGGAGTTGGTTCCTCGG 59.735 66.667 0.00 0.00 34.96 4.63
2761 11746 2.434359 GCCGGAGTTGGTTCCTCG 60.434 66.667 5.05 0.00 34.96 4.63
2762 11747 2.046217 GGCCGGAGTTGGTTCCTC 60.046 66.667 5.05 0.00 34.96 3.71
2763 11748 4.016706 CGGCCGGAGTTGGTTCCT 62.017 66.667 20.10 0.00 34.96 3.36
2764 11749 3.325201 ATCGGCCGGAGTTGGTTCC 62.325 63.158 27.83 0.00 0.00 3.62
2765 11750 2.106683 CATCGGCCGGAGTTGGTTC 61.107 63.158 27.83 0.00 0.00 3.62
2766 11751 2.046314 CATCGGCCGGAGTTGGTT 60.046 61.111 27.83 0.00 0.00 3.67
2767 11752 3.319198 ACATCGGCCGGAGTTGGT 61.319 61.111 27.83 11.63 0.00 3.67
2768 11753 2.819595 CACATCGGCCGGAGTTGG 60.820 66.667 27.83 10.96 0.00 3.77
2769 11754 3.499737 GCACATCGGCCGGAGTTG 61.500 66.667 27.83 19.44 0.00 3.16
2770 11755 4.778143 GGCACATCGGCCGGAGTT 62.778 66.667 27.83 5.03 45.40 3.01
2788 11773 3.567797 GTCAGCCCGCTTCGATGC 61.568 66.667 13.01 13.01 0.00 3.91
2789 11774 2.892425 GGTCAGCCCGCTTCGATG 60.892 66.667 0.00 0.00 0.00 3.84
2790 11775 2.650813 GATGGTCAGCCCGCTTCGAT 62.651 60.000 0.00 0.00 35.15 3.59
2791 11776 3.371097 GATGGTCAGCCCGCTTCGA 62.371 63.158 0.00 0.00 35.15 3.71
2792 11777 2.892425 GATGGTCAGCCCGCTTCG 60.892 66.667 0.00 0.00 35.15 3.79
2793 11778 2.514824 GGATGGTCAGCCCGCTTC 60.515 66.667 0.00 0.00 35.15 3.86
2799 11784 2.514824 GCGAAGGGATGGTCAGCC 60.515 66.667 0.00 0.00 35.80 4.85
2800 11785 2.514824 GGCGAAGGGATGGTCAGC 60.515 66.667 0.00 0.00 0.00 4.26
2801 11786 1.153289 CAGGCGAAGGGATGGTCAG 60.153 63.158 0.00 0.00 0.00 3.51
2802 11787 2.669133 CCAGGCGAAGGGATGGTCA 61.669 63.158 0.00 0.00 0.00 4.02
2803 11788 2.190578 CCAGGCGAAGGGATGGTC 59.809 66.667 0.00 0.00 0.00 4.02
2804 11789 4.115199 GCCAGGCGAAGGGATGGT 62.115 66.667 0.00 0.00 35.17 3.55
2805 11790 4.883354 GGCCAGGCGAAGGGATGG 62.883 72.222 5.00 0.00 35.84 3.51
2806 11791 3.801997 AGGCCAGGCGAAGGGATG 61.802 66.667 5.01 0.00 0.00 3.51
2807 11792 3.801997 CAGGCCAGGCGAAGGGAT 61.802 66.667 5.01 0.00 0.00 3.85
2819 11804 0.688487 TATATAACCACGGCCAGGCC 59.312 55.000 22.33 22.33 46.75 5.19
2820 11805 1.338769 CCTATATAACCACGGCCAGGC 60.339 57.143 11.05 1.26 0.00 4.85
2821 11806 1.975680 ACCTATATAACCACGGCCAGG 59.024 52.381 2.24 6.62 0.00 4.45
2822 11807 3.181458 ACAACCTATATAACCACGGCCAG 60.181 47.826 2.24 0.00 0.00 4.85
2823 11808 2.773087 ACAACCTATATAACCACGGCCA 59.227 45.455 2.24 0.00 0.00 5.36
2824 11809 3.135994 CACAACCTATATAACCACGGCC 58.864 50.000 0.00 0.00 0.00 6.13
2825 11810 2.546789 GCACAACCTATATAACCACGGC 59.453 50.000 0.00 0.00 0.00 5.68
2826 11811 4.067972 AGCACAACCTATATAACCACGG 57.932 45.455 0.00 0.00 0.00 4.94
2827 11812 4.208460 CGAAGCACAACCTATATAACCACG 59.792 45.833 0.00 0.00 0.00 4.94
2828 11813 4.510340 CCGAAGCACAACCTATATAACCAC 59.490 45.833 0.00 0.00 0.00 4.16
2829 11814 4.699637 CCGAAGCACAACCTATATAACCA 58.300 43.478 0.00 0.00 0.00 3.67
2830 11815 3.497262 GCCGAAGCACAACCTATATAACC 59.503 47.826 0.00 0.00 39.53 2.85
2831 11816 3.183775 CGCCGAAGCACAACCTATATAAC 59.816 47.826 0.00 0.00 39.83 1.89
2832 11817 3.068448 TCGCCGAAGCACAACCTATATAA 59.932 43.478 0.00 0.00 39.83 0.98
2833 11818 2.624364 TCGCCGAAGCACAACCTATATA 59.376 45.455 0.00 0.00 39.83 0.86
2834 11819 1.411246 TCGCCGAAGCACAACCTATAT 59.589 47.619 0.00 0.00 39.83 0.86
2835 11820 0.818938 TCGCCGAAGCACAACCTATA 59.181 50.000 0.00 0.00 39.83 1.31
2836 11821 0.036765 TTCGCCGAAGCACAACCTAT 60.037 50.000 0.00 0.00 39.83 2.57
2837 11822 0.669318 CTTCGCCGAAGCACAACCTA 60.669 55.000 14.62 0.00 39.83 3.08
2838 11823 1.961277 CTTCGCCGAAGCACAACCT 60.961 57.895 14.62 0.00 39.83 3.50
2839 11824 2.556287 CTTCGCCGAAGCACAACC 59.444 61.111 14.62 0.00 39.83 3.77
2846 11831 2.734673 GCTCTGTGCTTCGCCGAAG 61.735 63.158 22.02 22.02 42.03 3.79
2847 11832 2.738521 GCTCTGTGCTTCGCCGAA 60.739 61.111 0.00 0.00 38.95 4.30
2848 11833 4.742201 GGCTCTGTGCTTCGCCGA 62.742 66.667 1.44 0.00 42.39 5.54
2852 11837 3.043713 TTGCGGCTCTGTGCTTCG 61.044 61.111 0.00 0.00 42.39 3.79
2853 11838 2.558313 GTTGCGGCTCTGTGCTTC 59.442 61.111 0.00 0.00 42.39 3.86
2854 11839 2.980233 GGTTGCGGCTCTGTGCTT 60.980 61.111 0.00 0.00 42.39 3.91
2884 11869 1.384525 AGTAGTAGAGTGCAGCGGAG 58.615 55.000 0.00 0.00 0.00 4.63
2885 11870 1.472878 CAAGTAGTAGAGTGCAGCGGA 59.527 52.381 0.00 0.00 0.00 5.54
2886 11871 1.202582 ACAAGTAGTAGAGTGCAGCGG 59.797 52.381 0.00 0.00 0.00 5.52
2887 11872 2.095212 TCACAAGTAGTAGAGTGCAGCG 60.095 50.000 0.00 0.00 32.25 5.18
2888 11873 3.057174 ACTCACAAGTAGTAGAGTGCAGC 60.057 47.826 0.00 0.00 37.28 5.25
2889 11874 4.775058 ACTCACAAGTAGTAGAGTGCAG 57.225 45.455 0.00 0.00 37.28 4.41
2890 11875 4.796290 GCAACTCACAAGTAGTAGAGTGCA 60.796 45.833 0.00 0.00 38.08 4.57
2891 11876 3.675698 GCAACTCACAAGTAGTAGAGTGC 59.324 47.826 0.00 0.00 38.08 4.40
2892 11877 3.914966 CGCAACTCACAAGTAGTAGAGTG 59.085 47.826 0.00 0.00 38.08 3.51
2893 11878 3.568853 ACGCAACTCACAAGTAGTAGAGT 59.431 43.478 0.00 0.00 39.01 3.24
2894 11879 4.162096 ACGCAACTCACAAGTAGTAGAG 57.838 45.455 0.00 0.00 33.48 2.43
2895 11880 4.295870 CAACGCAACTCACAAGTAGTAGA 58.704 43.478 0.00 0.00 33.48 2.59
2896 11881 3.120991 GCAACGCAACTCACAAGTAGTAG 60.121 47.826 0.00 0.00 33.48 2.57
2897 11882 2.798283 GCAACGCAACTCACAAGTAGTA 59.202 45.455 0.00 0.00 33.48 1.82
2898 11883 1.597663 GCAACGCAACTCACAAGTAGT 59.402 47.619 0.00 0.00 33.48 2.73
2899 11884 1.397190 CGCAACGCAACTCACAAGTAG 60.397 52.381 0.00 0.00 33.48 2.57
2900 11885 0.579630 CGCAACGCAACTCACAAGTA 59.420 50.000 0.00 0.00 33.48 2.24
2901 11886 1.087202 TCGCAACGCAACTCACAAGT 61.087 50.000 0.00 0.00 37.32 3.16
2902 11887 0.235665 ATCGCAACGCAACTCACAAG 59.764 50.000 0.00 0.00 0.00 3.16
2903 11888 0.660488 AATCGCAACGCAACTCACAA 59.340 45.000 0.00 0.00 0.00 3.33
2904 11889 0.660488 AAATCGCAACGCAACTCACA 59.340 45.000 0.00 0.00 0.00 3.58
2905 11890 1.708680 GAAAATCGCAACGCAACTCAC 59.291 47.619 0.00 0.00 0.00 3.51
2906 11891 1.334599 GGAAAATCGCAACGCAACTCA 60.335 47.619 0.00 0.00 0.00 3.41
2907 11892 1.327507 GGAAAATCGCAACGCAACTC 58.672 50.000 0.00 0.00 0.00 3.01
2908 11893 0.039527 GGGAAAATCGCAACGCAACT 60.040 50.000 0.00 0.00 0.00 3.16
2909 11894 1.006825 GGGGAAAATCGCAACGCAAC 61.007 55.000 0.00 0.00 0.00 4.17
2910 11895 1.287503 GGGGAAAATCGCAACGCAA 59.712 52.632 0.00 0.00 0.00 4.85
2911 11896 2.958576 GGGGAAAATCGCAACGCA 59.041 55.556 0.00 0.00 0.00 5.24
2912 11897 2.190101 TTCGGGGAAAATCGCAACGC 62.190 55.000 0.00 0.00 0.00 4.84
2913 11898 0.238817 TTTCGGGGAAAATCGCAACG 59.761 50.000 0.00 0.00 0.00 4.10
2914 11899 2.324860 CTTTTCGGGGAAAATCGCAAC 58.675 47.619 4.20 0.00 40.14 4.17
2915 11900 1.271102 CCTTTTCGGGGAAAATCGCAA 59.729 47.619 4.20 0.00 40.14 4.85
2916 11901 0.885196 CCTTTTCGGGGAAAATCGCA 59.115 50.000 4.20 0.00 40.14 5.10
2917 11902 1.170442 TCCTTTTCGGGGAAAATCGC 58.830 50.000 4.20 0.00 40.14 4.58
2918 11903 2.163613 CCTTCCTTTTCGGGGAAAATCG 59.836 50.000 4.20 0.00 40.14 3.34
2919 11904 2.496070 CCCTTCCTTTTCGGGGAAAATC 59.504 50.000 4.20 0.00 40.14 2.17
2920 11905 2.158219 ACCCTTCCTTTTCGGGGAAAAT 60.158 45.455 3.72 0.00 40.14 1.82
2921 11906 1.218450 ACCCTTCCTTTTCGGGGAAAA 59.782 47.619 3.72 3.77 41.58 2.29
2922 11907 0.854908 ACCCTTCCTTTTCGGGGAAA 59.145 50.000 3.72 0.00 41.58 3.13
2923 11908 0.111639 CACCCTTCCTTTTCGGGGAA 59.888 55.000 3.72 0.00 42.44 3.97
2924 11909 0.768997 TCACCCTTCCTTTTCGGGGA 60.769 55.000 3.72 0.00 42.44 4.81
2925 11910 0.111639 TTCACCCTTCCTTTTCGGGG 59.888 55.000 0.00 0.00 42.44 5.73
2926 11911 1.534729 CTTCACCCTTCCTTTTCGGG 58.465 55.000 0.00 0.00 43.79 5.14
2927 11912 0.881796 GCTTCACCCTTCCTTTTCGG 59.118 55.000 0.00 0.00 0.00 4.30
2928 11913 1.537202 CTGCTTCACCCTTCCTTTTCG 59.463 52.381 0.00 0.00 0.00 3.46
2929 11914 2.587522 ACTGCTTCACCCTTCCTTTTC 58.412 47.619 0.00 0.00 0.00 2.29
2930 11915 2.755952 ACTGCTTCACCCTTCCTTTT 57.244 45.000 0.00 0.00 0.00 2.27
2931 11916 2.441750 TGTACTGCTTCACCCTTCCTTT 59.558 45.455 0.00 0.00 0.00 3.11
2932 11917 2.039084 CTGTACTGCTTCACCCTTCCTT 59.961 50.000 0.00 0.00 0.00 3.36
2933 11918 1.625818 CTGTACTGCTTCACCCTTCCT 59.374 52.381 0.00 0.00 0.00 3.36
2934 11919 1.348036 ACTGTACTGCTTCACCCTTCC 59.652 52.381 0.00 0.00 0.00 3.46
2935 11920 2.841442 ACTGTACTGCTTCACCCTTC 57.159 50.000 0.00 0.00 0.00 3.46
2936 11921 3.507411 TCTACTGTACTGCTTCACCCTT 58.493 45.455 0.00 0.00 0.00 3.95
2937 11922 3.093057 CTCTACTGTACTGCTTCACCCT 58.907 50.000 0.00 0.00 0.00 4.34
2938 11923 3.090037 TCTCTACTGTACTGCTTCACCC 58.910 50.000 0.00 0.00 0.00 4.61
2939 11924 4.993029 ATCTCTACTGTACTGCTTCACC 57.007 45.455 0.00 0.00 0.00 4.02
2940 11925 7.090953 ACTTATCTCTACTGTACTGCTTCAC 57.909 40.000 0.00 0.00 0.00 3.18
2941 11926 8.982091 ATACTTATCTCTACTGTACTGCTTCA 57.018 34.615 0.00 0.00 0.00 3.02
2950 11935 8.968969 ACCGAAGAAAATACTTATCTCTACTGT 58.031 33.333 0.00 0.00 0.00 3.55
2951 11936 9.239002 CACCGAAGAAAATACTTATCTCTACTG 57.761 37.037 0.00 0.00 0.00 2.74
2952 11937 9.186837 TCACCGAAGAAAATACTTATCTCTACT 57.813 33.333 0.00 0.00 0.00 2.57
2953 11938 9.453325 CTCACCGAAGAAAATACTTATCTCTAC 57.547 37.037 0.00 0.00 0.00 2.59
2954 11939 9.404848 TCTCACCGAAGAAAATACTTATCTCTA 57.595 33.333 0.00 0.00 0.00 2.43
2955 11940 8.294954 TCTCACCGAAGAAAATACTTATCTCT 57.705 34.615 0.00 0.00 0.00 3.10
2956 11941 8.809478 GTTCTCACCGAAGAAAATACTTATCTC 58.191 37.037 0.00 0.00 37.04 2.75
2957 11942 7.764901 GGTTCTCACCGAAGAAAATACTTATCT 59.235 37.037 0.00 0.00 37.04 1.98
2958 11943 7.907194 GGTTCTCACCGAAGAAAATACTTATC 58.093 38.462 0.00 0.00 37.04 1.75
2959 11944 7.845066 GGTTCTCACCGAAGAAAATACTTAT 57.155 36.000 0.00 0.00 37.04 1.73
2973 11958 7.083785 GTTCGATAAACCTTGGTTCTCACCG 62.084 48.000 5.43 6.10 37.64 4.94
2974 11959 3.934068 TCGATAAACCTTGGTTCTCACC 58.066 45.455 5.43 0.00 44.56 4.02
2975 11960 5.278964 GTTCGATAAACCTTGGTTCTCAC 57.721 43.478 5.43 0.00 31.20 3.51
2987 11972 3.371285 GTGCTCCTTCTGGTTCGATAAAC 59.629 47.826 0.00 0.00 37.12 2.01
2988 11973 3.596214 GTGCTCCTTCTGGTTCGATAAA 58.404 45.455 0.00 0.00 34.23 1.40
2989 11974 2.093658 GGTGCTCCTTCTGGTTCGATAA 60.094 50.000 0.00 0.00 34.23 1.75
2990 11975 1.480954 GGTGCTCCTTCTGGTTCGATA 59.519 52.381 0.00 0.00 34.23 2.92
2991 11976 0.250513 GGTGCTCCTTCTGGTTCGAT 59.749 55.000 0.00 0.00 34.23 3.59
2992 11977 1.118965 TGGTGCTCCTTCTGGTTCGA 61.119 55.000 6.34 0.00 34.23 3.71
2993 11978 0.250295 TTGGTGCTCCTTCTGGTTCG 60.250 55.000 6.34 0.00 34.23 3.95
2994 11979 1.239347 GTTGGTGCTCCTTCTGGTTC 58.761 55.000 6.34 0.00 34.23 3.62
2995 11980 0.178990 GGTTGGTGCTCCTTCTGGTT 60.179 55.000 6.34 0.00 34.23 3.67
2996 11981 1.352622 TGGTTGGTGCTCCTTCTGGT 61.353 55.000 6.34 0.00 34.23 4.00
2997 11982 0.178992 TTGGTTGGTGCTCCTTCTGG 60.179 55.000 6.34 0.00 34.23 3.86
2998 11983 1.338020 GTTTGGTTGGTGCTCCTTCTG 59.662 52.381 6.34 0.00 34.23 3.02
2999 11984 1.692411 GTTTGGTTGGTGCTCCTTCT 58.308 50.000 6.34 0.00 34.23 2.85
3000 11985 0.673985 GGTTTGGTTGGTGCTCCTTC 59.326 55.000 6.34 0.00 34.23 3.46
3001 11986 0.759060 GGGTTTGGTTGGTGCTCCTT 60.759 55.000 6.34 0.00 34.23 3.36
3002 11987 1.152546 GGGTTTGGTTGGTGCTCCT 60.153 57.895 6.34 0.00 34.23 3.69
3003 11988 0.111639 TAGGGTTTGGTTGGTGCTCC 59.888 55.000 0.00 0.00 0.00 4.70
3004 11989 1.202891 ACTAGGGTTTGGTTGGTGCTC 60.203 52.381 0.00 0.00 0.00 4.26
3005 11990 0.850784 ACTAGGGTTTGGTTGGTGCT 59.149 50.000 0.00 0.00 0.00 4.40
3006 11991 0.958822 CACTAGGGTTTGGTTGGTGC 59.041 55.000 0.00 0.00 0.00 5.01
3007 11992 2.621526 GTTCACTAGGGTTTGGTTGGTG 59.378 50.000 0.00 0.00 0.00 4.17
3008 11993 2.242708 TGTTCACTAGGGTTTGGTTGGT 59.757 45.455 0.00 0.00 0.00 3.67
3009 11994 2.938838 TGTTCACTAGGGTTTGGTTGG 58.061 47.619 0.00 0.00 0.00 3.77
3010 11995 3.697045 TGTTGTTCACTAGGGTTTGGTTG 59.303 43.478 0.00 0.00 0.00 3.77
3011 11996 3.697542 GTGTTGTTCACTAGGGTTTGGTT 59.302 43.478 0.00 0.00 43.13 3.67
3012 11997 3.284617 GTGTTGTTCACTAGGGTTTGGT 58.715 45.455 0.00 0.00 43.13 3.67
3013 11998 3.283751 TGTGTTGTTCACTAGGGTTTGG 58.716 45.455 0.00 0.00 46.27 3.28
3014 11999 4.792704 GCATGTGTTGTTCACTAGGGTTTG 60.793 45.833 0.00 0.00 46.27 2.93
3015 12000 3.317993 GCATGTGTTGTTCACTAGGGTTT 59.682 43.478 0.00 0.00 46.27 3.27
3016 12001 2.884639 GCATGTGTTGTTCACTAGGGTT 59.115 45.455 0.00 0.00 46.27 4.11
3017 12002 2.158682 TGCATGTGTTGTTCACTAGGGT 60.159 45.455 0.00 0.00 46.27 4.34
3018 12003 2.226437 GTGCATGTGTTGTTCACTAGGG 59.774 50.000 0.00 0.00 46.27 3.53
3019 12004 2.877786 TGTGCATGTGTTGTTCACTAGG 59.122 45.455 0.00 0.00 46.27 3.02
3020 12005 3.312146 TGTGTGCATGTGTTGTTCACTAG 59.688 43.478 0.00 0.00 46.27 2.57
3021 12006 3.064682 GTGTGTGCATGTGTTGTTCACTA 59.935 43.478 0.00 0.00 46.27 2.74
3022 12007 2.090760 TGTGTGCATGTGTTGTTCACT 58.909 42.857 0.00 0.00 46.27 3.41
3023 12008 2.184448 GTGTGTGCATGTGTTGTTCAC 58.816 47.619 0.00 0.00 46.31 3.18
3024 12009 1.815003 TGTGTGTGCATGTGTTGTTCA 59.185 42.857 0.00 0.00 0.00 3.18
3025 12010 2.558265 TGTGTGTGCATGTGTTGTTC 57.442 45.000 0.00 0.00 0.00 3.18
3026 12011 3.309961 TTTGTGTGTGCATGTGTTGTT 57.690 38.095 0.00 0.00 0.00 2.83
3027 12012 3.252400 CTTTTGTGTGTGCATGTGTTGT 58.748 40.909 0.00 0.00 0.00 3.32
3028 12013 2.029486 GCTTTTGTGTGTGCATGTGTTG 59.971 45.455 0.00 0.00 0.00 3.33
3029 12014 2.270047 GCTTTTGTGTGTGCATGTGTT 58.730 42.857 0.00 0.00 0.00 3.32
3030 12015 1.204231 TGCTTTTGTGTGTGCATGTGT 59.796 42.857 0.00 0.00 0.00 3.72
3031 12016 1.923899 TGCTTTTGTGTGTGCATGTG 58.076 45.000 0.00 0.00 0.00 3.21
3032 12017 2.669300 TTGCTTTTGTGTGTGCATGT 57.331 40.000 0.00 0.00 35.27 3.21
3033 12018 4.746115 AGTATTTGCTTTTGTGTGTGCATG 59.254 37.500 0.00 0.00 35.27 4.06
3034 12019 4.947645 AGTATTTGCTTTTGTGTGTGCAT 58.052 34.783 0.00 0.00 35.27 3.96
3035 12020 4.383850 AGTATTTGCTTTTGTGTGTGCA 57.616 36.364 0.00 0.00 0.00 4.57
3036 12021 5.069485 CAAGTATTTGCTTTTGTGTGTGC 57.931 39.130 0.00 0.00 0.00 4.57
3049 12034 2.327568 CGCTTTGGGTGCAAGTATTTG 58.672 47.619 0.00 0.00 37.36 2.32
3050 12035 1.272212 CCGCTTTGGGTGCAAGTATTT 59.728 47.619 0.00 0.00 0.00 1.40
3051 12036 0.887933 CCGCTTTGGGTGCAAGTATT 59.112 50.000 0.00 0.00 0.00 1.89
3052 12037 2.566824 CCGCTTTGGGTGCAAGTAT 58.433 52.632 0.00 0.00 0.00 2.12
3053 12038 4.073052 CCGCTTTGGGTGCAAGTA 57.927 55.556 0.00 0.00 0.00 2.24
3062 12047 3.064324 CCCTCTTGCCCGCTTTGG 61.064 66.667 0.00 0.00 37.55 3.28
3063 12048 1.903404 AACCCTCTTGCCCGCTTTG 60.903 57.895 0.00 0.00 0.00 2.77
3064 12049 1.903404 CAACCCTCTTGCCCGCTTT 60.903 57.895 0.00 0.00 0.00 3.51
3065 12050 2.282462 CAACCCTCTTGCCCGCTT 60.282 61.111 0.00 0.00 0.00 4.68
3066 12051 3.553095 GACAACCCTCTTGCCCGCT 62.553 63.158 0.00 0.00 0.00 5.52
3067 12052 3.056328 GACAACCCTCTTGCCCGC 61.056 66.667 0.00 0.00 0.00 6.13
3068 12053 0.609131 ATTGACAACCCTCTTGCCCG 60.609 55.000 0.00 0.00 0.00 6.13
3069 12054 1.177401 GATTGACAACCCTCTTGCCC 58.823 55.000 0.00 0.00 0.00 5.36
3070 12055 1.177401 GGATTGACAACCCTCTTGCC 58.823 55.000 0.00 0.00 0.00 4.52
3071 12056 1.177401 GGGATTGACAACCCTCTTGC 58.823 55.000 14.96 0.00 42.56 4.01
3072 12057 1.839424 GGGGATTGACAACCCTCTTG 58.161 55.000 19.17 0.00 44.97 3.02
3083 12068 5.779241 AGTAATGAGTTCAAGGGGATTGA 57.221 39.130 0.00 0.00 46.31 2.57
3084 12069 5.393461 GCAAGTAATGAGTTCAAGGGGATTG 60.393 44.000 0.00 0.00 40.52 2.67
3085 12070 4.706962 GCAAGTAATGAGTTCAAGGGGATT 59.293 41.667 0.00 0.00 0.00 3.01
3086 12071 4.263905 TGCAAGTAATGAGTTCAAGGGGAT 60.264 41.667 0.00 0.00 0.00 3.85
3087 12072 3.073798 TGCAAGTAATGAGTTCAAGGGGA 59.926 43.478 0.00 0.00 0.00 4.81
3088 12073 3.420893 TGCAAGTAATGAGTTCAAGGGG 58.579 45.455 0.00 0.00 0.00 4.79
3089 12074 4.082571 CCTTGCAAGTAATGAGTTCAAGGG 60.083 45.833 24.35 0.78 38.30 3.95
3090 12075 4.761739 TCCTTGCAAGTAATGAGTTCAAGG 59.238 41.667 24.35 15.92 40.38 3.61
3091 12076 5.947228 TCCTTGCAAGTAATGAGTTCAAG 57.053 39.130 24.35 5.06 0.00 3.02
3092 12077 6.003326 TGATCCTTGCAAGTAATGAGTTCAA 58.997 36.000 24.35 2.73 0.00 2.69
3093 12078 5.559770 TGATCCTTGCAAGTAATGAGTTCA 58.440 37.500 24.35 14.60 0.00 3.18
3094 12079 6.500684 TTGATCCTTGCAAGTAATGAGTTC 57.499 37.500 24.35 12.47 0.00 3.01
3095 12080 6.899393 TTTGATCCTTGCAAGTAATGAGTT 57.101 33.333 24.35 3.79 0.00 3.01
3096 12081 6.888632 AGATTTGATCCTTGCAAGTAATGAGT 59.111 34.615 24.35 6.26 0.00 3.41
3097 12082 7.330900 AGATTTGATCCTTGCAAGTAATGAG 57.669 36.000 24.35 8.62 0.00 2.90
3098 12083 7.177216 ACAAGATTTGATCCTTGCAAGTAATGA 59.823 33.333 24.35 14.72 42.46 2.57
3099 12084 7.318141 ACAAGATTTGATCCTTGCAAGTAATG 58.682 34.615 24.35 9.71 42.46 1.90
3100 12085 7.472334 ACAAGATTTGATCCTTGCAAGTAAT 57.528 32.000 24.35 16.96 42.46 1.89
3101 12086 6.899393 ACAAGATTTGATCCTTGCAAGTAA 57.101 33.333 24.35 12.94 42.46 2.24
3102 12087 9.330063 CTATACAAGATTTGATCCTTGCAAGTA 57.670 33.333 24.35 10.26 42.46 2.24
3103 12088 7.284034 CCTATACAAGATTTGATCCTTGCAAGT 59.716 37.037 24.35 7.53 42.46 3.16
3104 12089 7.284034 ACCTATACAAGATTTGATCCTTGCAAG 59.716 37.037 19.93 19.93 42.46 4.01
3105 12090 7.118723 ACCTATACAAGATTTGATCCTTGCAA 58.881 34.615 0.00 0.00 42.46 4.08
3106 12091 6.662755 ACCTATACAAGATTTGATCCTTGCA 58.337 36.000 8.76 0.00 42.46 4.08
3107 12092 8.150945 TCTACCTATACAAGATTTGATCCTTGC 58.849 37.037 8.76 0.00 42.46 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.