Multiple sequence alignment - TraesCS2D01G258400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G258400 chr2D 100.000 2289 0 0 1 2289 314345901 314343613 0.000000e+00 4228.0
1 TraesCS2D01G258400 chr2D 96.004 976 29 7 1 967 165103785 165102811 0.000000e+00 1578.0
2 TraesCS2D01G258400 chr2D 82.601 569 68 25 417 972 473608718 473609268 7.400000e-130 473.0
3 TraesCS2D01G258400 chr2D 96.855 159 5 0 2131 2289 528421032 528420874 1.350000e-67 267.0
4 TraesCS2D01G258400 chr2D 96.226 159 6 0 2131 2289 206633885 206634043 6.270000e-66 261.0
5 TraesCS2D01G258400 chr2D 95.000 160 8 0 2130 2289 647863561 647863720 3.770000e-63 252.0
6 TraesCS2D01G258400 chr2D 91.860 86 6 1 1448 1533 591362790 591362874 3.990000e-23 119.0
7 TraesCS2D01G258400 chr2D 88.421 95 8 3 1447 1540 538943508 538943416 6.680000e-21 111.0
8 TraesCS2D01G258400 chr5D 95.282 975 35 7 1 967 164715491 164716462 0.000000e+00 1535.0
9 TraesCS2D01G258400 chr5D 94.628 484 24 2 968 1450 460217161 460217643 0.000000e+00 749.0
10 TraesCS2D01G258400 chr5D 94.444 162 9 0 2128 2289 379299237 379299398 1.360000e-62 250.0
11 TraesCS2D01G258400 chr4D 94.851 971 42 7 1 967 58000701 58001667 0.000000e+00 1509.0
12 TraesCS2D01G258400 chr4D 94.650 972 43 8 1 967 57994046 57995013 0.000000e+00 1498.0
13 TraesCS2D01G258400 chr4D 92.103 975 36 13 1 967 354373418 354372477 0.000000e+00 1336.0
14 TraesCS2D01G258400 chr4D 94.215 484 25 3 968 1450 493970149 493969668 0.000000e+00 736.0
15 TraesCS2D01G258400 chr4D 93.595 484 29 2 968 1450 116523600 116523118 0.000000e+00 721.0
16 TraesCS2D01G258400 chr4D 93.388 484 30 2 968 1450 48682967 48682485 0.000000e+00 715.0
17 TraesCS2D01G258400 chr4D 89.310 290 24 3 1531 1814 116523121 116522833 7.780000e-95 357.0
18 TraesCS2D01G258400 chr4D 88.462 286 27 2 1531 1810 508926102 508926387 7.830000e-90 340.0
19 TraesCS2D01G258400 chr4D 88.800 250 22 4 6 249 252214638 252214887 3.700000e-78 302.0
20 TraesCS2D01G258400 chr4D 92.899 169 10 2 2122 2289 349002458 349002291 6.320000e-61 244.0
21 TraesCS2D01G258400 chr3D 94.667 975 40 9 1 967 209234898 209235868 0.000000e+00 1502.0
22 TraesCS2D01G258400 chr3D 93.750 976 47 11 1 967 209227168 209228138 0.000000e+00 1452.0
23 TraesCS2D01G258400 chr3D 93.595 484 29 2 968 1450 515007572 515008054 0.000000e+00 721.0
24 TraesCS2D01G258400 chr3D 88.732 284 26 2 1532 1809 6289059 6289342 2.180000e-90 342.0
25 TraesCS2D01G258400 chr3D 96.226 159 6 0 2131 2289 30697497 30697339 6.270000e-66 261.0
26 TraesCS2D01G258400 chr3D 95.597 159 7 0 2131 2289 30696254 30696412 2.920000e-64 255.0
27 TraesCS2D01G258400 chr7D 95.390 846 32 7 1 842 307522844 307522002 0.000000e+00 1339.0
28 TraesCS2D01G258400 chr7D 91.881 973 52 18 1 967 307515037 307514086 0.000000e+00 1334.0
29 TraesCS2D01G258400 chr1A 93.814 485 27 3 968 1450 327010962 327010479 0.000000e+00 726.0
30 TraesCS2D01G258400 chr1A 88.636 88 9 1 1447 1534 477033548 477033462 3.110000e-19 106.0
31 TraesCS2D01G258400 chr1D 93.608 485 28 3 968 1450 429021108 429021591 0.000000e+00 721.0
32 TraesCS2D01G258400 chr1D 88.502 287 26 3 1531 1810 429021588 429021874 7.830000e-90 340.0
33 TraesCS2D01G258400 chr1D 95.210 167 7 1 2124 2289 7758153 7758319 1.740000e-66 263.0
34 TraesCS2D01G258400 chr1D 95.625 160 7 0 2130 2289 29137202 29137361 8.110000e-65 257.0
35 TraesCS2D01G258400 chr1D 91.860 86 6 1 1448 1533 251295168 251295252 3.990000e-23 119.0
36 TraesCS2D01G258400 chr3A 93.388 484 30 2 968 1450 418764698 418764216 0.000000e+00 715.0
37 TraesCS2D01G258400 chr3A 89.007 282 25 3 1531 1806 418764219 418763938 6.050000e-91 344.0
38 TraesCS2D01G258400 chr4A 93.196 485 31 2 967 1450 327747414 327746931 0.000000e+00 712.0
39 TraesCS2D01G258400 chr2A 92.836 335 14 5 1807 2132 421220810 421221143 5.720000e-131 477.0
40 TraesCS2D01G258400 chr2A 87.778 90 10 1 1447 1536 404608208 404608296 1.120000e-18 104.0
41 TraesCS2D01G258400 chr2B 86.705 346 31 11 633 967 423572218 423572559 9.990000e-99 370.0
42 TraesCS2D01G258400 chr2B 86.147 231 12 7 1807 2032 382583085 382582870 4.920000e-57 231.0
43 TraesCS2D01G258400 chr2B 95.833 48 2 0 2083 2130 382582871 382582824 6.780000e-11 78.7
44 TraesCS2D01G258400 chr4B 90.036 281 21 5 1532 1806 551731550 551731829 7.780000e-95 357.0
45 TraesCS2D01G258400 chr4B 89.324 281 23 5 1532 1806 551786158 551786437 1.680000e-91 346.0
46 TraesCS2D01G258400 chr4B 86.170 94 11 2 1448 1541 75507377 75507286 1.450000e-17 100.0
47 TraesCS2D01G258400 chr7B 89.286 280 24 3 1532 1806 150843550 150843828 1.680000e-91 346.0
48 TraesCS2D01G258400 chr7B 89.655 87 6 3 1448 1533 337157941 337158025 8.650000e-20 108.0
49 TraesCS2D01G258400 chr7B 86.170 94 12 1 1448 1541 172500110 172500018 1.450000e-17 100.0
50 TraesCS2D01G258400 chr6D 88.421 285 27 2 1532 1810 450907399 450907683 2.820000e-89 339.0
51 TraesCS2D01G258400 chr1B 86.170 94 12 1 1448 1541 357593956 357594048 1.450000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G258400 chr2D 314343613 314345901 2288 True 4228.0 4228 100.0000 1 2289 1 chr2D.!!$R2 2288
1 TraesCS2D01G258400 chr2D 165102811 165103785 974 True 1578.0 1578 96.0040 1 967 1 chr2D.!!$R1 966
2 TraesCS2D01G258400 chr2D 473608718 473609268 550 False 473.0 473 82.6010 417 972 1 chr2D.!!$F2 555
3 TraesCS2D01G258400 chr5D 164715491 164716462 971 False 1535.0 1535 95.2820 1 967 1 chr5D.!!$F1 966
4 TraesCS2D01G258400 chr4D 58000701 58001667 966 False 1509.0 1509 94.8510 1 967 1 chr4D.!!$F2 966
5 TraesCS2D01G258400 chr4D 57994046 57995013 967 False 1498.0 1498 94.6500 1 967 1 chr4D.!!$F1 966
6 TraesCS2D01G258400 chr4D 354372477 354373418 941 True 1336.0 1336 92.1030 1 967 1 chr4D.!!$R3 966
7 TraesCS2D01G258400 chr4D 116522833 116523600 767 True 539.0 721 91.4525 968 1814 2 chr4D.!!$R5 846
8 TraesCS2D01G258400 chr3D 209234898 209235868 970 False 1502.0 1502 94.6670 1 967 1 chr3D.!!$F4 966
9 TraesCS2D01G258400 chr3D 209227168 209228138 970 False 1452.0 1452 93.7500 1 967 1 chr3D.!!$F3 966
10 TraesCS2D01G258400 chr7D 307522002 307522844 842 True 1339.0 1339 95.3900 1 842 1 chr7D.!!$R2 841
11 TraesCS2D01G258400 chr7D 307514086 307515037 951 True 1334.0 1334 91.8810 1 967 1 chr7D.!!$R1 966
12 TraesCS2D01G258400 chr1D 429021108 429021874 766 False 530.5 721 91.0550 968 1810 2 chr1D.!!$F4 842
13 TraesCS2D01G258400 chr3A 418763938 418764698 760 True 529.5 715 91.1975 968 1806 2 chr3A.!!$R1 838

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1006 0.535335 GGGCGTCACAGTCATCCTTA 59.465 55.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2007 2047 0.038618 TTCCTCCGTGTGTGTCGATG 60.039 55.0 0.0 0.0 0.0 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
176 178 2.208349 AGAGGCACAGAGGGGGTT 59.792 61.111 0.00 0.00 0.00 4.11
189 191 1.764854 GGGGTTAGGAGATCGGGCA 60.765 63.158 0.00 0.00 0.00 5.36
254 256 1.608717 GGAGATGGGATCGATCGGGG 61.609 65.000 18.81 0.00 0.00 5.73
388 392 5.123936 GTCTCTCTCTTCTCTCTCCCTTAC 58.876 50.000 0.00 0.00 0.00 2.34
511 517 6.375455 GCTTGATCCAGGAAAAATAGAAGTGA 59.625 38.462 0.00 0.00 0.00 3.41
583 589 5.710099 GGTTTGAACAAGGAGTATGAATCCA 59.290 40.000 0.00 0.00 39.47 3.41
702 708 5.063817 GCATTGGGATTTATTTGCAAGTGTC 59.936 40.000 4.47 0.60 0.00 3.67
718 724 5.183904 GCAAGTGTCTCAAAGGTAATTCCAT 59.816 40.000 0.00 0.00 39.02 3.41
719 725 6.615088 CAAGTGTCTCAAAGGTAATTCCATG 58.385 40.000 0.00 0.00 39.02 3.66
834 852 9.613428 ATCAACGATCTATTTATTTGTTGAGGA 57.387 29.630 10.17 0.00 44.86 3.71
976 1006 0.535335 GGGCGTCACAGTCATCCTTA 59.465 55.000 0.00 0.00 0.00 2.69
985 1015 2.897969 ACAGTCATCCTTACACCGAAGT 59.102 45.455 0.00 0.00 0.00 3.01
997 1027 2.146342 CACCGAAGTTTGAGTGCATCT 58.854 47.619 0.00 0.00 0.00 2.90
1054 1084 1.019278 GCCGACGGAATTCAAGCTGA 61.019 55.000 20.50 0.00 0.00 4.26
1159 1189 1.668751 GCCGCCGTTTATCAGATCAAA 59.331 47.619 0.00 0.00 0.00 2.69
1173 1203 2.880890 AGATCAAAATCGGCTACATGGC 59.119 45.455 0.00 0.00 36.97 4.40
1174 1204 2.121291 TCAAAATCGGCTACATGGCA 57.879 45.000 0.00 0.00 41.89 4.92
1225 1255 3.381590 TCAAGGTCATCATCTTCGACGAT 59.618 43.478 0.00 0.00 0.00 3.73
1315 1346 1.485480 GGCACCTCCTTCCTAAGTACC 59.515 57.143 0.00 0.00 0.00 3.34
1381 1413 5.286438 TCGTTATGATGTGTGGTACTATGC 58.714 41.667 0.00 0.00 0.00 3.14
1390 1422 6.731292 TGTGTGGTACTATGCTATCTGAAT 57.269 37.500 0.00 0.00 0.00 2.57
1425 1457 4.959596 AGTTGATGCTCTGTTTATGCTG 57.040 40.909 0.00 0.00 0.00 4.41
1450 1482 4.681781 GCTCTGCTTATGATGTGTGGTACT 60.682 45.833 0.00 0.00 0.00 2.73
1451 1483 5.011090 TCTGCTTATGATGTGTGGTACTC 57.989 43.478 0.00 0.00 0.00 2.59
1452 1484 4.122776 CTGCTTATGATGTGTGGTACTCC 58.877 47.826 0.00 0.00 0.00 3.85
1453 1485 3.118408 TGCTTATGATGTGTGGTACTCCC 60.118 47.826 0.00 0.00 0.00 4.30
1454 1486 3.134804 GCTTATGATGTGTGGTACTCCCT 59.865 47.826 0.00 0.00 0.00 4.20
1455 1487 4.740934 GCTTATGATGTGTGGTACTCCCTC 60.741 50.000 0.00 0.00 0.00 4.30
1456 1488 2.319025 TGATGTGTGGTACTCCCTCA 57.681 50.000 0.00 0.00 34.36 3.86
1457 1489 2.179427 TGATGTGTGGTACTCCCTCAG 58.821 52.381 0.00 0.00 37.39 3.35
1458 1490 2.180276 GATGTGTGGTACTCCCTCAGT 58.820 52.381 0.00 0.00 37.39 3.41
1459 1491 1.629043 TGTGTGGTACTCCCTCAGTC 58.371 55.000 0.00 0.00 37.39 3.51
1460 1492 1.147191 TGTGTGGTACTCCCTCAGTCT 59.853 52.381 0.00 0.00 37.39 3.24
1461 1493 1.819903 GTGTGGTACTCCCTCAGTCTC 59.180 57.143 0.00 0.00 37.39 3.36
1462 1494 1.427753 TGTGGTACTCCCTCAGTCTCA 59.572 52.381 0.00 0.00 36.43 3.27
1463 1495 2.043115 TGTGGTACTCCCTCAGTCTCAT 59.957 50.000 0.00 0.00 36.43 2.90
1464 1496 3.268595 TGTGGTACTCCCTCAGTCTCATA 59.731 47.826 0.00 0.00 36.43 2.15
1465 1497 4.264217 TGTGGTACTCCCTCAGTCTCATAA 60.264 45.833 0.00 0.00 36.43 1.90
1466 1498 4.896482 GTGGTACTCCCTCAGTCTCATAAT 59.104 45.833 0.00 0.00 36.43 1.28
1467 1499 6.069331 GTGGTACTCCCTCAGTCTCATAATA 58.931 44.000 0.00 0.00 36.43 0.98
1468 1500 6.722129 GTGGTACTCCCTCAGTCTCATAATAT 59.278 42.308 0.00 0.00 36.43 1.28
1469 1501 7.889073 GTGGTACTCCCTCAGTCTCATAATATA 59.111 40.741 0.00 0.00 36.43 0.86
1470 1502 8.453681 TGGTACTCCCTCAGTCTCATAATATAA 58.546 37.037 0.00 0.00 36.43 0.98
1471 1503 8.962679 GGTACTCCCTCAGTCTCATAATATAAG 58.037 40.741 0.00 0.00 36.43 1.73
1472 1504 9.742144 GTACTCCCTCAGTCTCATAATATAAGA 57.258 37.037 0.00 0.00 36.43 2.10
1474 1506 9.253832 ACTCCCTCAGTCTCATAATATAAGATG 57.746 37.037 0.00 0.00 0.00 2.90
1475 1507 9.253832 CTCCCTCAGTCTCATAATATAAGATGT 57.746 37.037 0.00 0.00 0.00 3.06
1476 1508 9.607333 TCCCTCAGTCTCATAATATAAGATGTT 57.393 33.333 0.00 0.00 0.00 2.71
1477 1509 9.650539 CCCTCAGTCTCATAATATAAGATGTTG 57.349 37.037 0.00 0.00 0.00 3.33
1495 1527 9.778741 AAGATGTTGTTTTGACAATAGACTAGA 57.221 29.630 0.00 0.00 31.79 2.43
1496 1528 9.778741 AGATGTTGTTTTGACAATAGACTAGAA 57.221 29.630 0.00 0.00 31.79 2.10
1528 1560 4.872664 GTCTTACATTATGAGACGGAGGG 58.127 47.826 0.00 0.00 34.53 4.30
1529 1561 4.583489 GTCTTACATTATGAGACGGAGGGA 59.417 45.833 0.00 0.00 34.53 4.20
1530 1562 4.827835 TCTTACATTATGAGACGGAGGGAG 59.172 45.833 0.00 0.00 0.00 4.30
1531 1563 3.033659 ACATTATGAGACGGAGGGAGT 57.966 47.619 0.00 0.00 0.00 3.85
1532 1564 4.180377 ACATTATGAGACGGAGGGAGTA 57.820 45.455 0.00 0.00 0.00 2.59
1533 1565 3.890147 ACATTATGAGACGGAGGGAGTAC 59.110 47.826 0.00 0.00 0.00 2.73
1537 1569 1.283905 TGAGACGGAGGGAGTACATGA 59.716 52.381 0.00 0.00 0.00 3.07
1597 1630 0.763035 GAGGTTACCACACACCAGGT 59.237 55.000 3.51 0.00 41.89 4.00
1636 1670 5.831103 ACTCCATGAGTTGGGTTTATTCAT 58.169 37.500 0.00 0.00 46.45 2.57
1646 1680 7.675062 AGTTGGGTTTATTCATTAACATGCAA 58.325 30.769 0.00 0.00 0.00 4.08
1662 1696 0.459489 GCAAGCAACCAAACACCAGA 59.541 50.000 0.00 0.00 0.00 3.86
1684 1718 0.889994 GTGTGATTCAGCCCATGCAA 59.110 50.000 0.00 0.00 41.13 4.08
1715 1753 2.462456 TGCAACCAAACAACTTGCAA 57.538 40.000 0.00 0.00 45.54 4.08
1745 1783 6.375174 TGCATTTGAGACTGCATTTGTATAGT 59.625 34.615 0.00 0.00 43.11 2.12
1749 1787 6.530019 TGAGACTGCATTTGTATAGTCAGA 57.470 37.500 0.00 0.00 41.44 3.27
1757 1795 7.836842 TGCATTTGTATAGTCAGACTGAGTTA 58.163 34.615 17.80 8.37 31.49 2.24
1766 1804 4.021544 AGTCAGACTGAGTTAAGAAGGCTG 60.022 45.833 5.10 8.06 46.61 4.85
1769 1807 3.643792 AGACTGAGTTAAGAAGGCTGTGT 59.356 43.478 0.00 0.00 0.00 3.72
1810 1850 0.170339 GAACCAAACACGCCCATAGC 59.830 55.000 0.00 0.00 38.52 2.97
1827 1867 2.805277 GCGATATGCATTGCAAGCC 58.195 52.632 16.46 6.45 43.62 4.35
1828 1868 1.000233 GCGATATGCATTGCAAGCCG 61.000 55.000 16.46 17.99 43.62 5.52
1829 1869 0.386352 CGATATGCATTGCAAGCCGG 60.386 55.000 16.46 0.00 43.62 6.13
1830 1870 0.665369 GATATGCATTGCAAGCCGGC 60.665 55.000 21.89 21.89 43.62 6.13
1831 1871 2.091102 ATATGCATTGCAAGCCGGCC 62.091 55.000 26.15 8.84 43.62 6.13
1833 1873 4.807039 GCATTGCAAGCCGGCCAG 62.807 66.667 26.15 17.78 0.00 4.85
1834 1874 4.137872 CATTGCAAGCCGGCCAGG 62.138 66.667 26.15 14.47 44.97 4.45
1852 1892 3.260483 CTGAGCTGCCATCGCGAC 61.260 66.667 12.93 0.00 38.08 5.19
1853 1893 3.995219 CTGAGCTGCCATCGCGACA 62.995 63.158 12.93 3.91 38.08 4.35
1854 1894 3.558411 GAGCTGCCATCGCGACAC 61.558 66.667 12.93 4.09 38.08 3.67
1855 1895 3.997064 GAGCTGCCATCGCGACACT 62.997 63.158 12.93 5.52 38.08 3.55
1856 1896 3.857854 GCTGCCATCGCGACACTG 61.858 66.667 12.93 5.99 38.08 3.66
1857 1897 2.125952 CTGCCATCGCGACACTGA 60.126 61.111 12.93 0.00 38.08 3.41
1858 1898 1.520120 CTGCCATCGCGACACTGAT 60.520 57.895 12.93 0.00 38.08 2.90
1859 1899 1.759293 CTGCCATCGCGACACTGATG 61.759 60.000 12.93 4.18 41.27 3.07
1860 1900 1.811266 GCCATCGCGACACTGATGT 60.811 57.895 12.93 0.00 43.71 3.06
1861 1901 0.527600 GCCATCGCGACACTGATGTA 60.528 55.000 12.93 0.00 39.95 2.29
1862 1902 1.200483 CCATCGCGACACTGATGTAC 58.800 55.000 12.93 0.00 39.95 2.90
1863 1903 1.469079 CCATCGCGACACTGATGTACA 60.469 52.381 12.93 0.00 39.95 2.90
1873 1913 1.845266 CTGATGTACAGCGGCTACTG 58.155 55.000 7.07 5.17 43.59 2.74
1874 1914 0.179111 TGATGTACAGCGGCTACTGC 60.179 55.000 0.26 0.00 41.60 4.40
1875 1915 0.179111 GATGTACAGCGGCTACTGCA 60.179 55.000 0.26 0.80 41.60 4.41
1876 1916 0.465705 ATGTACAGCGGCTACTGCAT 59.534 50.000 0.26 3.39 41.60 3.96
1877 1917 0.460109 TGTACAGCGGCTACTGCATG 60.460 55.000 0.26 0.00 41.60 4.06
1878 1918 0.460284 GTACAGCGGCTACTGCATGT 60.460 55.000 0.26 0.00 41.60 3.21
1879 1919 0.179111 TACAGCGGCTACTGCATGTC 60.179 55.000 0.26 0.00 41.60 3.06
1880 1920 1.153489 CAGCGGCTACTGCATGTCT 60.153 57.895 0.26 0.00 41.91 3.41
1881 1921 1.142748 AGCGGCTACTGCATGTCTC 59.857 57.895 0.00 0.00 41.91 3.36
1882 1922 2.233654 GCGGCTACTGCATGTCTCG 61.234 63.158 0.00 0.00 41.91 4.04
1883 1923 1.139734 CGGCTACTGCATGTCTCGT 59.860 57.895 0.00 0.00 41.91 4.18
1884 1924 0.867753 CGGCTACTGCATGTCTCGTC 60.868 60.000 0.00 0.00 41.91 4.20
1885 1925 0.457851 GGCTACTGCATGTCTCGTCT 59.542 55.000 0.00 0.00 41.91 4.18
1886 1926 1.554392 GCTACTGCATGTCTCGTCTG 58.446 55.000 0.00 0.00 39.41 3.51
1887 1927 1.800655 GCTACTGCATGTCTCGTCTGG 60.801 57.143 0.00 0.00 39.41 3.86
1888 1928 0.173481 TACTGCATGTCTCGTCTGGC 59.827 55.000 0.00 0.00 0.00 4.85
1889 1929 1.079612 CTGCATGTCTCGTCTGGCA 60.080 57.895 0.00 0.00 0.00 4.92
1890 1930 0.461516 CTGCATGTCTCGTCTGGCAT 60.462 55.000 0.00 0.00 0.00 4.40
1891 1931 0.741927 TGCATGTCTCGTCTGGCATG 60.742 55.000 13.10 13.10 40.96 4.06
1892 1932 1.434622 GCATGTCTCGTCTGGCATGG 61.435 60.000 16.90 4.94 39.11 3.66
1893 1933 0.107993 CATGTCTCGTCTGGCATGGT 60.108 55.000 10.74 0.00 36.15 3.55
1894 1934 0.615331 ATGTCTCGTCTGGCATGGTT 59.385 50.000 0.00 0.00 0.00 3.67
1895 1935 1.262417 TGTCTCGTCTGGCATGGTTA 58.738 50.000 0.00 0.00 0.00 2.85
1896 1936 1.621317 TGTCTCGTCTGGCATGGTTAA 59.379 47.619 0.00 0.00 0.00 2.01
1897 1937 2.037902 TGTCTCGTCTGGCATGGTTAAA 59.962 45.455 0.00 0.00 0.00 1.52
1898 1938 2.415512 GTCTCGTCTGGCATGGTTAAAC 59.584 50.000 0.00 0.00 0.00 2.01
1899 1939 2.037902 TCTCGTCTGGCATGGTTAAACA 59.962 45.455 0.00 0.00 0.00 2.83
1900 1940 2.416547 CTCGTCTGGCATGGTTAAACAG 59.583 50.000 0.00 0.00 0.00 3.16
1901 1941 2.037902 TCGTCTGGCATGGTTAAACAGA 59.962 45.455 0.00 0.00 35.97 3.41
1902 1942 2.416547 CGTCTGGCATGGTTAAACAGAG 59.583 50.000 0.00 0.00 38.70 3.35
1903 1943 2.162408 GTCTGGCATGGTTAAACAGAGC 59.838 50.000 11.22 11.22 38.70 4.09
1904 1944 2.040278 TCTGGCATGGTTAAACAGAGCT 59.960 45.455 17.16 0.00 33.62 4.09
1905 1945 3.263170 TCTGGCATGGTTAAACAGAGCTA 59.737 43.478 17.16 12.05 33.62 3.32
1906 1946 4.080356 TCTGGCATGGTTAAACAGAGCTAT 60.080 41.667 17.16 0.00 33.62 2.97
1907 1947 4.199310 TGGCATGGTTAAACAGAGCTATC 58.801 43.478 17.16 5.09 0.00 2.08
1908 1948 3.565902 GGCATGGTTAAACAGAGCTATCC 59.434 47.826 17.16 1.26 0.00 2.59
1909 1949 4.199310 GCATGGTTAAACAGAGCTATCCA 58.801 43.478 12.14 0.00 0.00 3.41
1910 1950 4.640201 GCATGGTTAAACAGAGCTATCCAA 59.360 41.667 12.14 0.00 0.00 3.53
1911 1951 5.125417 GCATGGTTAAACAGAGCTATCCAAA 59.875 40.000 12.14 0.00 0.00 3.28
1912 1952 6.350110 GCATGGTTAAACAGAGCTATCCAAAA 60.350 38.462 12.14 0.00 0.00 2.44
1913 1953 6.817765 TGGTTAAACAGAGCTATCCAAAAG 57.182 37.500 0.00 0.00 0.00 2.27
1914 1954 6.539173 TGGTTAAACAGAGCTATCCAAAAGA 58.461 36.000 0.00 0.00 0.00 2.52
1915 1955 7.001674 TGGTTAAACAGAGCTATCCAAAAGAA 58.998 34.615 0.00 0.00 0.00 2.52
1916 1956 7.504238 TGGTTAAACAGAGCTATCCAAAAGAAA 59.496 33.333 0.00 0.00 0.00 2.52
1917 1957 8.357402 GGTTAAACAGAGCTATCCAAAAGAAAA 58.643 33.333 0.00 0.00 0.00 2.29
1918 1958 9.399403 GTTAAACAGAGCTATCCAAAAGAAAAG 57.601 33.333 0.00 0.00 0.00 2.27
1919 1959 7.588497 AAACAGAGCTATCCAAAAGAAAAGT 57.412 32.000 0.00 0.00 0.00 2.66
1920 1960 8.691661 AAACAGAGCTATCCAAAAGAAAAGTA 57.308 30.769 0.00 0.00 0.00 2.24
1921 1961 8.691661 AACAGAGCTATCCAAAAGAAAAGTAA 57.308 30.769 0.00 0.00 0.00 2.24
1922 1962 8.691661 ACAGAGCTATCCAAAAGAAAAGTAAA 57.308 30.769 0.00 0.00 0.00 2.01
1923 1963 9.131791 ACAGAGCTATCCAAAAGAAAAGTAAAA 57.868 29.630 0.00 0.00 0.00 1.52
1924 1964 9.965824 CAGAGCTATCCAAAAGAAAAGTAAAAA 57.034 29.630 0.00 0.00 0.00 1.94
1925 1965 9.967346 AGAGCTATCCAAAAGAAAAGTAAAAAC 57.033 29.630 0.00 0.00 0.00 2.43
1926 1966 9.744468 GAGCTATCCAAAAGAAAAGTAAAAACA 57.256 29.630 0.00 0.00 0.00 2.83
1937 1977 9.893305 AAGAAAAGTAAAAACAAGATACCATCG 57.107 29.630 0.00 0.00 0.00 3.84
1938 1978 9.063615 AGAAAAGTAAAAACAAGATACCATCGT 57.936 29.630 0.00 0.00 0.00 3.73
1939 1979 9.673454 GAAAAGTAAAAACAAGATACCATCGTT 57.327 29.630 0.00 0.00 0.00 3.85
1940 1980 9.673454 AAAAGTAAAAACAAGATACCATCGTTC 57.327 29.630 0.00 0.00 0.00 3.95
1941 1981 8.617290 AAGTAAAAACAAGATACCATCGTTCT 57.383 30.769 0.00 0.00 0.00 3.01
1942 1982 9.715121 AAGTAAAAACAAGATACCATCGTTCTA 57.285 29.630 0.00 0.00 0.00 2.10
1943 1983 9.367444 AGTAAAAACAAGATACCATCGTTCTAG 57.633 33.333 0.00 0.00 0.00 2.43
1944 1984 9.362539 GTAAAAACAAGATACCATCGTTCTAGA 57.637 33.333 0.00 0.00 0.00 2.43
1945 1985 8.842358 AAAAACAAGATACCATCGTTCTAGAA 57.158 30.769 0.00 0.00 0.00 2.10
1946 1986 8.842358 AAAACAAGATACCATCGTTCTAGAAA 57.158 30.769 6.78 0.00 0.00 2.52
1947 1987 8.842358 AAACAAGATACCATCGTTCTAGAAAA 57.158 30.769 6.78 0.00 0.00 2.29
1948 1988 8.842358 AACAAGATACCATCGTTCTAGAAAAA 57.158 30.769 6.78 0.00 0.00 1.94
1968 2008 5.473066 AAAATGAGTCCACATTTCCTTGG 57.527 39.130 0.00 0.00 45.71 3.61
1969 2009 4.387026 AATGAGTCCACATTTCCTTGGA 57.613 40.909 0.00 0.00 39.72 3.53
1970 2010 3.423539 TGAGTCCACATTTCCTTGGAG 57.576 47.619 0.00 0.00 42.75 3.86
1971 2011 2.040278 TGAGTCCACATTTCCTTGGAGG 59.960 50.000 0.00 0.00 42.75 4.30
1972 2012 2.305927 GAGTCCACATTTCCTTGGAGGA 59.694 50.000 0.00 0.00 42.75 3.71
1973 2013 2.040412 AGTCCACATTTCCTTGGAGGAC 59.960 50.000 13.84 13.84 45.78 3.85
1974 2014 2.061848 TCCACATTTCCTTGGAGGACA 58.938 47.619 0.00 0.00 45.78 4.02
1975 2015 2.649312 TCCACATTTCCTTGGAGGACAT 59.351 45.455 0.00 0.00 45.78 3.06
1976 2016 3.019564 CCACATTTCCTTGGAGGACATC 58.980 50.000 0.00 0.00 45.78 3.06
1977 2017 3.308688 CCACATTTCCTTGGAGGACATCT 60.309 47.826 0.00 0.00 45.78 2.90
1978 2018 4.080356 CCACATTTCCTTGGAGGACATCTA 60.080 45.833 0.00 0.00 45.78 1.98
1979 2019 4.878397 CACATTTCCTTGGAGGACATCTAC 59.122 45.833 0.00 0.00 45.78 2.59
1980 2020 3.887621 TTTCCTTGGAGGACATCTACG 57.112 47.619 0.00 0.00 45.78 3.51
1981 2021 1.776662 TCCTTGGAGGACATCTACGG 58.223 55.000 0.00 0.00 40.06 4.02
1982 2022 1.286849 TCCTTGGAGGACATCTACGGA 59.713 52.381 0.00 0.00 40.06 4.69
1983 2023 1.683917 CCTTGGAGGACATCTACGGAG 59.316 57.143 0.00 0.00 37.67 4.63
1984 2024 1.683917 CTTGGAGGACATCTACGGAGG 59.316 57.143 0.00 0.00 0.00 4.30
1985 2025 0.924090 TGGAGGACATCTACGGAGGA 59.076 55.000 0.00 0.00 0.00 3.71
1986 2026 1.286849 TGGAGGACATCTACGGAGGAA 59.713 52.381 0.00 0.00 0.00 3.36
1987 2027 2.091278 TGGAGGACATCTACGGAGGAAT 60.091 50.000 0.00 0.00 0.00 3.01
1988 2028 2.559231 GGAGGACATCTACGGAGGAATC 59.441 54.545 0.00 0.00 0.00 2.52
1989 2029 3.223435 GAGGACATCTACGGAGGAATCA 58.777 50.000 0.00 0.00 0.00 2.57
1990 2030 3.637229 GAGGACATCTACGGAGGAATCAA 59.363 47.826 0.00 0.00 0.00 2.57
1991 2031 4.227197 AGGACATCTACGGAGGAATCAAT 58.773 43.478 0.00 0.00 0.00 2.57
1992 2032 4.656112 AGGACATCTACGGAGGAATCAATT 59.344 41.667 0.00 0.00 0.00 2.32
1993 2033 5.131142 AGGACATCTACGGAGGAATCAATTT 59.869 40.000 0.00 0.00 0.00 1.82
1994 2034 5.823045 GGACATCTACGGAGGAATCAATTTT 59.177 40.000 0.00 0.00 0.00 1.82
1995 2035 6.318900 GGACATCTACGGAGGAATCAATTTTT 59.681 38.462 0.00 0.00 0.00 1.94
2013 2053 2.483583 TTTTTGGTGTGTGCATCGAC 57.516 45.000 0.00 0.00 0.00 4.20
2014 2054 1.383523 TTTTGGTGTGTGCATCGACA 58.616 45.000 0.00 0.00 0.00 4.35
2015 2055 0.660488 TTTGGTGTGTGCATCGACAC 59.340 50.000 14.88 14.88 45.52 3.67
2020 2060 3.623993 TGTGCATCGACACACACG 58.376 55.556 16.16 0.00 45.36 4.49
2021 2061 1.953642 TGTGCATCGACACACACGG 60.954 57.895 16.16 0.00 45.36 4.94
2022 2062 1.663388 GTGCATCGACACACACGGA 60.663 57.895 13.31 0.00 40.40 4.69
2023 2063 1.372872 TGCATCGACACACACGGAG 60.373 57.895 0.00 0.00 0.00 4.63
2024 2064 2.094659 GCATCGACACACACGGAGG 61.095 63.158 0.00 0.00 0.00 4.30
2025 2065 1.584495 CATCGACACACACGGAGGA 59.416 57.895 0.00 0.00 0.00 3.71
2026 2066 0.038618 CATCGACACACACGGAGGAA 60.039 55.000 0.00 0.00 0.00 3.36
2027 2067 0.895530 ATCGACACACACGGAGGAAT 59.104 50.000 0.00 0.00 0.00 3.01
2028 2068 0.242825 TCGACACACACGGAGGAATC 59.757 55.000 0.00 0.00 0.00 2.52
2029 2069 0.243907 CGACACACACGGAGGAATCT 59.756 55.000 0.00 0.00 0.00 2.40
2030 2070 1.336887 CGACACACACGGAGGAATCTT 60.337 52.381 0.00 0.00 0.00 2.40
2031 2071 2.094906 CGACACACACGGAGGAATCTTA 60.095 50.000 0.00 0.00 0.00 2.10
2032 2072 3.428999 CGACACACACGGAGGAATCTTAT 60.429 47.826 0.00 0.00 0.00 1.73
2033 2073 4.201980 CGACACACACGGAGGAATCTTATA 60.202 45.833 0.00 0.00 0.00 0.98
2034 2074 5.263968 ACACACACGGAGGAATCTTATAG 57.736 43.478 0.00 0.00 0.00 1.31
2035 2075 4.710375 ACACACACGGAGGAATCTTATAGT 59.290 41.667 0.00 0.00 0.00 2.12
2036 2076 5.187186 ACACACACGGAGGAATCTTATAGTT 59.813 40.000 0.00 0.00 0.00 2.24
2037 2077 6.106673 CACACACGGAGGAATCTTATAGTTT 58.893 40.000 0.00 0.00 0.00 2.66
2038 2078 7.093640 ACACACACGGAGGAATCTTATAGTTTA 60.094 37.037 0.00 0.00 0.00 2.01
2039 2079 7.435488 CACACACGGAGGAATCTTATAGTTTAG 59.565 40.741 0.00 0.00 0.00 1.85
2040 2080 7.123847 ACACACGGAGGAATCTTATAGTTTAGT 59.876 37.037 0.00 0.00 0.00 2.24
2041 2081 8.627403 CACACGGAGGAATCTTATAGTTTAGTA 58.373 37.037 0.00 0.00 0.00 1.82
2042 2082 8.628280 ACACGGAGGAATCTTATAGTTTAGTAC 58.372 37.037 0.00 0.00 0.00 2.73
2043 2083 8.848182 CACGGAGGAATCTTATAGTTTAGTACT 58.152 37.037 0.00 0.00 41.04 2.73
2044 2084 9.065798 ACGGAGGAATCTTATAGTTTAGTACTC 57.934 37.037 0.00 0.00 38.33 2.59
2045 2085 9.287373 CGGAGGAATCTTATAGTTTAGTACTCT 57.713 37.037 0.00 0.00 38.33 3.24
2059 2099 9.201127 AGTTTAGTACTCTATTTTCGTGTTTCC 57.799 33.333 0.00 0.00 28.23 3.13
2060 2100 9.201127 GTTTAGTACTCTATTTTCGTGTTTCCT 57.799 33.333 0.00 0.00 0.00 3.36
2061 2101 9.768662 TTTAGTACTCTATTTTCGTGTTTCCTT 57.231 29.630 0.00 0.00 0.00 3.36
2062 2102 7.653767 AGTACTCTATTTTCGTGTTTCCTTG 57.346 36.000 0.00 0.00 0.00 3.61
2063 2103 7.215085 AGTACTCTATTTTCGTGTTTCCTTGT 58.785 34.615 0.00 0.00 0.00 3.16
2064 2104 8.362639 AGTACTCTATTTTCGTGTTTCCTTGTA 58.637 33.333 0.00 0.00 0.00 2.41
2065 2105 9.148104 GTACTCTATTTTCGTGTTTCCTTGTAT 57.852 33.333 0.00 0.00 0.00 2.29
2067 2107 9.886132 ACTCTATTTTCGTGTTTCCTTGTATAT 57.114 29.630 0.00 0.00 0.00 0.86
2072 2112 7.605410 TTTCGTGTTTCCTTGTATATTCTCC 57.395 36.000 0.00 0.00 0.00 3.71
2073 2113 5.345702 TCGTGTTTCCTTGTATATTCTCCG 58.654 41.667 0.00 0.00 0.00 4.63
2074 2114 5.105635 TCGTGTTTCCTTGTATATTCTCCGT 60.106 40.000 0.00 0.00 0.00 4.69
2075 2115 5.005394 CGTGTTTCCTTGTATATTCTCCGTG 59.995 44.000 0.00 0.00 0.00 4.94
2076 2116 4.873827 TGTTTCCTTGTATATTCTCCGTGC 59.126 41.667 0.00 0.00 0.00 5.34
2077 2117 3.364889 TCCTTGTATATTCTCCGTGCG 57.635 47.619 0.00 0.00 0.00 5.34
2078 2118 2.691526 TCCTTGTATATTCTCCGTGCGT 59.308 45.455 0.00 0.00 0.00 5.24
2079 2119 2.794910 CCTTGTATATTCTCCGTGCGTG 59.205 50.000 0.00 0.00 0.00 5.34
2080 2120 3.444916 CTTGTATATTCTCCGTGCGTGT 58.555 45.455 0.00 0.00 0.00 4.49
2081 2121 4.498513 CCTTGTATATTCTCCGTGCGTGTA 60.499 45.833 0.00 0.00 0.00 2.90
2082 2122 4.841443 TGTATATTCTCCGTGCGTGTAT 57.159 40.909 0.00 0.00 0.00 2.29
2083 2123 5.945466 TGTATATTCTCCGTGCGTGTATA 57.055 39.130 0.00 0.00 0.00 1.47
2084 2124 5.692814 TGTATATTCTCCGTGCGTGTATAC 58.307 41.667 0.00 0.00 0.00 1.47
2085 2125 4.841443 ATATTCTCCGTGCGTGTATACA 57.159 40.909 0.08 0.08 0.00 2.29
2086 2126 3.728076 ATTCTCCGTGCGTGTATACAT 57.272 42.857 9.18 0.00 0.00 2.29
2087 2127 4.841443 ATTCTCCGTGCGTGTATACATA 57.159 40.909 9.18 0.00 0.00 2.29
2088 2128 4.841443 TTCTCCGTGCGTGTATACATAT 57.159 40.909 9.18 0.00 0.00 1.78
2089 2129 5.945466 TTCTCCGTGCGTGTATACATATA 57.055 39.130 9.18 0.00 0.00 0.86
2090 2130 5.541098 TCTCCGTGCGTGTATACATATAG 57.459 43.478 9.18 2.88 0.00 1.31
2091 2131 4.393990 TCTCCGTGCGTGTATACATATAGG 59.606 45.833 9.18 9.45 0.00 2.57
2092 2132 4.325972 TCCGTGCGTGTATACATATAGGA 58.674 43.478 9.18 11.47 0.00 2.94
2093 2133 4.945543 TCCGTGCGTGTATACATATAGGAT 59.054 41.667 9.18 0.00 0.00 3.24
2094 2134 5.065602 TCCGTGCGTGTATACATATAGGATC 59.934 44.000 9.18 0.00 0.00 3.36
2095 2135 5.066117 CCGTGCGTGTATACATATAGGATCT 59.934 44.000 9.18 0.00 0.00 2.75
2096 2136 6.404403 CCGTGCGTGTATACATATAGGATCTT 60.404 42.308 9.18 0.00 0.00 2.40
2097 2137 6.469275 CGTGCGTGTATACATATAGGATCTTG 59.531 42.308 9.18 0.00 0.00 3.02
2098 2138 6.752351 GTGCGTGTATACATATAGGATCTTGG 59.248 42.308 9.18 0.00 0.00 3.61
2099 2139 6.661805 TGCGTGTATACATATAGGATCTTGGA 59.338 38.462 9.18 0.00 0.00 3.53
2100 2140 6.973474 GCGTGTATACATATAGGATCTTGGAC 59.027 42.308 9.18 0.00 0.00 4.02
2101 2141 7.148052 GCGTGTATACATATAGGATCTTGGACT 60.148 40.741 9.18 0.00 0.00 3.85
2102 2142 8.184848 CGTGTATACATATAGGATCTTGGACTG 58.815 40.741 9.18 0.00 0.00 3.51
2103 2143 7.976734 GTGTATACATATAGGATCTTGGACTGC 59.023 40.741 9.18 0.00 0.00 4.40
2104 2144 7.673926 TGTATACATATAGGATCTTGGACTGCA 59.326 37.037 0.08 0.00 0.00 4.41
2105 2145 5.894298 ACATATAGGATCTTGGACTGCAA 57.106 39.130 0.00 0.00 0.00 4.08
2106 2146 6.252599 ACATATAGGATCTTGGACTGCAAA 57.747 37.500 0.00 0.00 0.00 3.68
2107 2147 6.294473 ACATATAGGATCTTGGACTGCAAAG 58.706 40.000 0.00 0.00 0.00 2.77
2108 2148 4.851639 ATAGGATCTTGGACTGCAAAGT 57.148 40.909 0.00 0.00 0.00 2.66
2109 2149 5.957771 ATAGGATCTTGGACTGCAAAGTA 57.042 39.130 0.00 0.00 0.00 2.24
2110 2150 4.851639 AGGATCTTGGACTGCAAAGTAT 57.148 40.909 0.00 0.00 0.00 2.12
2111 2151 5.957771 AGGATCTTGGACTGCAAAGTATA 57.042 39.130 0.00 0.00 0.00 1.47
2112 2152 6.506538 AGGATCTTGGACTGCAAAGTATAT 57.493 37.500 0.00 0.00 0.00 0.86
2113 2153 6.904626 AGGATCTTGGACTGCAAAGTATATT 58.095 36.000 0.00 0.00 0.00 1.28
2114 2154 7.349598 AGGATCTTGGACTGCAAAGTATATTT 58.650 34.615 0.00 0.00 0.00 1.40
2115 2155 7.284034 AGGATCTTGGACTGCAAAGTATATTTG 59.716 37.037 0.00 0.00 0.00 2.32
2135 2175 3.543680 GCTAGTGGCATCAAGGAGTAA 57.456 47.619 0.00 0.00 41.35 2.24
2136 2176 3.873910 GCTAGTGGCATCAAGGAGTAAA 58.126 45.455 0.00 0.00 41.35 2.01
2137 2177 4.455606 GCTAGTGGCATCAAGGAGTAAAT 58.544 43.478 0.00 0.00 41.35 1.40
2138 2178 4.884164 GCTAGTGGCATCAAGGAGTAAATT 59.116 41.667 0.00 0.00 41.35 1.82
2139 2179 5.220931 GCTAGTGGCATCAAGGAGTAAATTG 60.221 44.000 0.00 0.00 41.35 2.32
2140 2180 3.445096 AGTGGCATCAAGGAGTAAATTGC 59.555 43.478 0.00 0.00 0.00 3.56
2141 2181 3.193267 GTGGCATCAAGGAGTAAATTGCA 59.807 43.478 0.00 0.00 0.00 4.08
2142 2182 4.025360 TGGCATCAAGGAGTAAATTGCAT 58.975 39.130 0.00 0.00 0.00 3.96
2143 2183 5.067674 GTGGCATCAAGGAGTAAATTGCATA 59.932 40.000 0.00 0.00 0.00 3.14
2144 2184 5.655974 TGGCATCAAGGAGTAAATTGCATAA 59.344 36.000 0.00 0.00 0.00 1.90
2145 2185 6.154192 TGGCATCAAGGAGTAAATTGCATAAA 59.846 34.615 0.00 0.00 0.00 1.40
2146 2186 7.041107 GGCATCAAGGAGTAAATTGCATAAAA 58.959 34.615 0.00 0.00 0.00 1.52
2147 2187 7.010460 GGCATCAAGGAGTAAATTGCATAAAAC 59.990 37.037 0.00 0.00 0.00 2.43
2148 2188 7.010460 GCATCAAGGAGTAAATTGCATAAAACC 59.990 37.037 0.00 0.00 0.00 3.27
2149 2189 7.531857 TCAAGGAGTAAATTGCATAAAACCA 57.468 32.000 0.00 0.00 0.00 3.67
2150 2190 8.133024 TCAAGGAGTAAATTGCATAAAACCAT 57.867 30.769 0.00 0.00 0.00 3.55
2151 2191 8.250332 TCAAGGAGTAAATTGCATAAAACCATC 58.750 33.333 0.00 0.00 0.00 3.51
2152 2192 7.716799 AGGAGTAAATTGCATAAAACCATCA 57.283 32.000 0.00 0.00 0.00 3.07
2153 2193 7.547227 AGGAGTAAATTGCATAAAACCATCAC 58.453 34.615 0.00 0.00 0.00 3.06
2154 2194 7.397192 AGGAGTAAATTGCATAAAACCATCACT 59.603 33.333 0.00 0.00 0.00 3.41
2155 2195 8.034804 GGAGTAAATTGCATAAAACCATCACTT 58.965 33.333 0.00 0.00 0.00 3.16
2156 2196 9.423061 GAGTAAATTGCATAAAACCATCACTTT 57.577 29.630 0.00 0.00 0.00 2.66
2157 2197 9.206870 AGTAAATTGCATAAAACCATCACTTTG 57.793 29.630 0.00 0.00 0.00 2.77
2158 2198 9.202273 GTAAATTGCATAAAACCATCACTTTGA 57.798 29.630 0.00 0.00 0.00 2.69
2159 2199 7.894376 AATTGCATAAAACCATCACTTTGAG 57.106 32.000 0.00 0.00 0.00 3.02
2160 2200 5.389859 TGCATAAAACCATCACTTTGAGG 57.610 39.130 0.00 0.00 0.00 3.86
2166 2206 2.338577 CCATCACTTTGAGGGCTAGG 57.661 55.000 0.00 0.00 41.71 3.02
2167 2207 1.561542 CCATCACTTTGAGGGCTAGGT 59.438 52.381 0.00 0.00 41.71 3.08
2168 2208 2.025887 CCATCACTTTGAGGGCTAGGTT 60.026 50.000 0.00 0.00 41.71 3.50
2169 2209 3.562176 CCATCACTTTGAGGGCTAGGTTT 60.562 47.826 0.00 0.00 41.71 3.27
2170 2210 3.140325 TCACTTTGAGGGCTAGGTTTG 57.860 47.619 0.00 0.00 0.00 2.93
2171 2211 1.541588 CACTTTGAGGGCTAGGTTTGC 59.458 52.381 0.00 0.00 0.00 3.68
2172 2212 0.804989 CTTTGAGGGCTAGGTTTGCG 59.195 55.000 0.00 0.00 0.00 4.85
2173 2213 0.398696 TTTGAGGGCTAGGTTTGCGA 59.601 50.000 0.00 0.00 0.00 5.10
2174 2214 0.398696 TTGAGGGCTAGGTTTGCGAA 59.601 50.000 0.00 0.00 0.00 4.70
2175 2215 0.398696 TGAGGGCTAGGTTTGCGAAA 59.601 50.000 0.00 0.00 0.00 3.46
2176 2216 1.202830 TGAGGGCTAGGTTTGCGAAAA 60.203 47.619 0.00 0.00 0.00 2.29
2177 2217 1.883926 GAGGGCTAGGTTTGCGAAAAA 59.116 47.619 0.00 0.00 0.00 1.94
2178 2218 1.611977 AGGGCTAGGTTTGCGAAAAAC 59.388 47.619 0.00 0.00 0.00 2.43
2179 2219 1.338655 GGGCTAGGTTTGCGAAAAACA 59.661 47.619 6.70 0.00 32.04 2.83
2180 2220 2.390938 GGCTAGGTTTGCGAAAAACAC 58.609 47.619 6.70 0.00 32.04 3.32
2181 2221 2.034179 GGCTAGGTTTGCGAAAAACACT 59.966 45.455 6.70 8.11 32.04 3.55
2182 2222 3.251487 GGCTAGGTTTGCGAAAAACACTA 59.749 43.478 6.70 8.72 32.04 2.74
2183 2223 4.261280 GGCTAGGTTTGCGAAAAACACTAA 60.261 41.667 6.70 0.00 32.04 2.24
2184 2224 4.909880 GCTAGGTTTGCGAAAAACACTAAG 59.090 41.667 6.70 0.00 32.04 2.18
2185 2225 5.277634 GCTAGGTTTGCGAAAAACACTAAGA 60.278 40.000 6.70 0.00 32.04 2.10
2186 2226 5.767816 AGGTTTGCGAAAAACACTAAGAT 57.232 34.783 6.70 0.00 32.04 2.40
2187 2227 6.870971 AGGTTTGCGAAAAACACTAAGATA 57.129 33.333 6.70 0.00 32.04 1.98
2188 2228 6.665465 AGGTTTGCGAAAAACACTAAGATAC 58.335 36.000 6.70 0.00 32.04 2.24
2189 2229 6.261381 AGGTTTGCGAAAAACACTAAGATACA 59.739 34.615 6.70 0.00 32.04 2.29
2190 2230 6.577427 GGTTTGCGAAAAACACTAAGATACAG 59.423 38.462 0.00 0.00 32.04 2.74
2191 2231 6.854496 TTGCGAAAAACACTAAGATACAGT 57.146 33.333 0.00 0.00 0.00 3.55
2192 2232 6.854496 TGCGAAAAACACTAAGATACAGTT 57.146 33.333 0.00 0.00 0.00 3.16
2193 2233 7.254227 TGCGAAAAACACTAAGATACAGTTT 57.746 32.000 0.00 0.00 34.19 2.66
2194 2234 7.349711 TGCGAAAAACACTAAGATACAGTTTC 58.650 34.615 0.00 0.00 31.80 2.78
2195 2235 7.225931 TGCGAAAAACACTAAGATACAGTTTCT 59.774 33.333 0.00 0.00 31.80 2.52
2196 2236 7.740781 GCGAAAAACACTAAGATACAGTTTCTC 59.259 37.037 0.00 0.00 31.80 2.87
2197 2237 8.979574 CGAAAAACACTAAGATACAGTTTCTCT 58.020 33.333 0.00 0.00 31.80 3.10
2215 2255 4.049393 GCAGAAAGCACCACGTCT 57.951 55.556 0.00 0.00 44.79 4.18
2216 2256 2.321213 GCAGAAAGCACCACGTCTT 58.679 52.632 0.00 0.00 44.79 3.01
2217 2257 0.040958 GCAGAAAGCACCACGTCTTG 60.041 55.000 0.00 0.00 44.79 3.02
2218 2258 0.040958 CAGAAAGCACCACGTCTTGC 60.041 55.000 9.47 9.47 39.16 4.01
2219 2259 1.082756 GAAAGCACCACGTCTTGCG 60.083 57.895 11.30 0.00 43.87 4.85
2232 2272 3.550561 CGTCTTGCGTAATTCTTTTGCA 58.449 40.909 0.00 0.00 35.54 4.08
2233 2273 3.971871 CGTCTTGCGTAATTCTTTTGCAA 59.028 39.130 0.00 0.00 42.68 4.08
2234 2274 4.439449 CGTCTTGCGTAATTCTTTTGCAAA 59.561 37.500 8.05 8.05 44.05 3.68
2235 2275 5.052040 CGTCTTGCGTAATTCTTTTGCAAAA 60.052 36.000 22.61 22.61 44.05 2.44
2236 2276 6.507141 CGTCTTGCGTAATTCTTTTGCAAAAA 60.507 34.615 23.92 11.98 44.05 1.94
2237 2277 6.623353 GTCTTGCGTAATTCTTTTGCAAAAAC 59.377 34.615 23.92 17.36 44.05 2.43
2238 2278 5.396750 TGCGTAATTCTTTTGCAAAAACC 57.603 34.783 23.92 13.15 31.69 3.27
2239 2279 4.870426 TGCGTAATTCTTTTGCAAAAACCA 59.130 33.333 23.92 15.09 31.69 3.67
2240 2280 5.194657 GCGTAATTCTTTTGCAAAAACCAC 58.805 37.500 23.92 15.65 0.00 4.16
2241 2281 5.733299 CGTAATTCTTTTGCAAAAACCACC 58.267 37.500 23.92 10.52 0.00 4.61
2242 2282 4.873768 AATTCTTTTGCAAAAACCACCG 57.126 36.364 23.92 12.25 0.00 4.94
2243 2283 3.594603 TTCTTTTGCAAAAACCACCGA 57.405 38.095 23.92 14.24 0.00 4.69
2244 2284 3.810310 TCTTTTGCAAAAACCACCGAT 57.190 38.095 23.92 0.00 0.00 4.18
2245 2285 3.712187 TCTTTTGCAAAAACCACCGATC 58.288 40.909 23.92 0.00 0.00 3.69
2246 2286 2.126914 TTTGCAAAAACCACCGATCG 57.873 45.000 10.02 8.51 0.00 3.69
2247 2287 0.312416 TTGCAAAAACCACCGATCGG 59.688 50.000 32.20 32.20 42.03 4.18
2248 2288 1.443702 GCAAAAACCACCGATCGGC 60.444 57.895 33.62 12.63 39.32 5.54
2249 2289 1.154301 CAAAAACCACCGATCGGCG 60.154 57.895 33.62 24.62 39.32 6.46
2265 2305 4.876828 CGGATCGGGCCGCGTTAA 62.877 66.667 23.83 3.23 45.38 2.01
2266 2306 2.965462 GGATCGGGCCGCGTTAAG 60.965 66.667 23.83 0.00 0.00 1.85
2267 2307 2.202837 GATCGGGCCGCGTTAAGT 60.203 61.111 23.83 0.03 0.00 2.24
2268 2308 1.066257 GATCGGGCCGCGTTAAGTA 59.934 57.895 23.83 0.44 0.00 2.24
2269 2309 0.528249 GATCGGGCCGCGTTAAGTAA 60.528 55.000 23.83 0.00 0.00 2.24
2270 2310 0.529119 ATCGGGCCGCGTTAAGTAAG 60.529 55.000 23.83 0.00 0.00 2.34
2271 2311 1.446618 CGGGCCGCGTTAAGTAAGT 60.447 57.895 15.42 0.00 0.00 2.24
2272 2312 1.015607 CGGGCCGCGTTAAGTAAGTT 61.016 55.000 15.42 0.00 0.00 2.66
2273 2313 1.159285 GGGCCGCGTTAAGTAAGTTT 58.841 50.000 4.92 0.00 0.00 2.66
2274 2314 2.345876 GGGCCGCGTTAAGTAAGTTTA 58.654 47.619 4.92 0.00 0.00 2.01
2275 2315 2.938451 GGGCCGCGTTAAGTAAGTTTAT 59.062 45.455 4.92 0.00 0.00 1.40
2276 2316 3.242511 GGGCCGCGTTAAGTAAGTTTATG 60.243 47.826 4.92 0.00 0.00 1.90
2277 2317 3.618150 GGCCGCGTTAAGTAAGTTTATGA 59.382 43.478 4.92 0.00 0.00 2.15
2278 2318 4.493057 GGCCGCGTTAAGTAAGTTTATGAC 60.493 45.833 4.92 0.00 0.00 3.06
2279 2319 4.091800 GCCGCGTTAAGTAAGTTTATGACA 59.908 41.667 4.92 0.00 0.00 3.58
2280 2320 5.723135 GCCGCGTTAAGTAAGTTTATGACAG 60.723 44.000 4.92 0.00 0.00 3.51
2281 2321 5.346822 CCGCGTTAAGTAAGTTTATGACAGT 59.653 40.000 4.92 0.00 0.00 3.55
2282 2322 6.128742 CCGCGTTAAGTAAGTTTATGACAGTT 60.129 38.462 4.92 0.00 0.00 3.16
2283 2323 6.730619 CGCGTTAAGTAAGTTTATGACAGTTG 59.269 38.462 0.00 0.00 0.00 3.16
2284 2324 7.013529 GCGTTAAGTAAGTTTATGACAGTTGG 58.986 38.462 0.00 0.00 0.00 3.77
2285 2325 7.515643 CGTTAAGTAAGTTTATGACAGTTGGG 58.484 38.462 0.00 0.00 0.00 4.12
2286 2326 7.360607 CGTTAAGTAAGTTTATGACAGTTGGGG 60.361 40.741 0.00 0.00 0.00 4.96
2287 2327 4.332828 AGTAAGTTTATGACAGTTGGGGC 58.667 43.478 0.00 0.00 0.00 5.80
2288 2328 2.215942 AGTTTATGACAGTTGGGGCC 57.784 50.000 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
176 178 2.520982 CCCGTGCCCGATCTCCTA 60.521 66.667 0.00 0.00 35.63 2.94
254 256 1.070914 GGTTCGATCCCCTTCATCTCC 59.929 57.143 0.63 0.00 0.00 3.71
467 473 1.405105 GCGCATTTTTATGAGCCCAGA 59.595 47.619 0.30 0.00 40.68 3.86
774 781 4.082125 GAGGGAATTCACATGGTGACTTT 58.918 43.478 11.02 0.00 42.60 2.66
834 852 9.282569 TGCCAGCATGTCTTTTAATTTTTAAAT 57.717 25.926 0.00 0.00 0.00 1.40
976 1006 1.873591 GATGCACTCAAACTTCGGTGT 59.126 47.619 0.00 0.00 32.90 4.16
1044 1074 3.319122 GGTGTTGTTCCTTCAGCTTGAAT 59.681 43.478 0.00 0.00 35.59 2.57
1054 1084 2.193536 GCAGCCGGTGTTGTTCCTT 61.194 57.895 1.90 0.00 0.00 3.36
1148 1178 5.934043 CCATGTAGCCGATTTTGATCTGATA 59.066 40.000 0.00 0.00 0.00 2.15
1159 1189 0.392461 ACGTTGCCATGTAGCCGATT 60.392 50.000 0.00 0.00 0.00 3.34
1173 1203 1.795286 GAGTCAGGAGCTTGAACGTTG 59.205 52.381 5.00 0.00 0.00 4.10
1174 1204 1.270358 GGAGTCAGGAGCTTGAACGTT 60.270 52.381 0.00 0.00 0.00 3.99
1225 1255 0.697658 TGACCACCTCAATGCCATCA 59.302 50.000 0.00 0.00 0.00 3.07
1315 1346 6.653183 CATAAACCATAAAGCAGACTCGATG 58.347 40.000 0.00 0.00 0.00 3.84
1390 1422 7.278646 CAGAGCATCAACTACTTAACAGCATAA 59.721 37.037 0.00 0.00 37.82 1.90
1425 1457 2.353889 CCACACATCATAAGCAGAGCAC 59.646 50.000 0.00 0.00 0.00 4.40
1450 1482 9.607333 AACATCTTATATTATGAGACTGAGGGA 57.393 33.333 0.62 0.00 0.00 4.20
1451 1483 9.650539 CAACATCTTATATTATGAGACTGAGGG 57.349 37.037 0.62 0.00 0.00 4.30
1506 1538 4.583489 TCCCTCCGTCTCATAATGTAAGAC 59.417 45.833 0.00 0.00 36.82 3.01
1507 1539 4.800023 TCCCTCCGTCTCATAATGTAAGA 58.200 43.478 0.00 0.00 0.00 2.10
1508 1540 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
1509 1541 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
1510 1542 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
1511 1543 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
1512 1544 3.889538 TGTACTCCCTCCGTCTCATAATG 59.110 47.826 0.00 0.00 0.00 1.90
1513 1545 4.180377 TGTACTCCCTCCGTCTCATAAT 57.820 45.455 0.00 0.00 0.00 1.28
1514 1546 3.657398 TGTACTCCCTCCGTCTCATAA 57.343 47.619 0.00 0.00 0.00 1.90
1515 1547 3.137728 TCATGTACTCCCTCCGTCTCATA 59.862 47.826 0.00 0.00 0.00 2.15
1516 1548 2.091830 TCATGTACTCCCTCCGTCTCAT 60.092 50.000 0.00 0.00 0.00 2.90
1517 1549 1.283905 TCATGTACTCCCTCCGTCTCA 59.716 52.381 0.00 0.00 0.00 3.27
1518 1550 2.054232 TCATGTACTCCCTCCGTCTC 57.946 55.000 0.00 0.00 0.00 3.36
1519 1551 2.695666 CAATCATGTACTCCCTCCGTCT 59.304 50.000 0.00 0.00 0.00 4.18
1520 1552 2.431057 ACAATCATGTACTCCCTCCGTC 59.569 50.000 0.00 0.00 38.24 4.79
1521 1553 2.168521 CACAATCATGTACTCCCTCCGT 59.831 50.000 0.00 0.00 37.82 4.69
1522 1554 2.826428 CACAATCATGTACTCCCTCCG 58.174 52.381 0.00 0.00 37.82 4.63
1523 1555 2.171448 AGCACAATCATGTACTCCCTCC 59.829 50.000 0.00 0.00 37.82 4.30
1524 1556 3.118629 TCAGCACAATCATGTACTCCCTC 60.119 47.826 0.00 0.00 37.82 4.30
1525 1557 2.840038 TCAGCACAATCATGTACTCCCT 59.160 45.455 0.00 0.00 37.82 4.20
1526 1558 3.266510 TCAGCACAATCATGTACTCCC 57.733 47.619 0.00 0.00 37.82 4.30
1527 1559 4.093998 CACTTCAGCACAATCATGTACTCC 59.906 45.833 0.00 0.00 37.82 3.85
1528 1560 4.692625 ACACTTCAGCACAATCATGTACTC 59.307 41.667 0.00 0.00 37.82 2.59
1529 1561 4.453478 CACACTTCAGCACAATCATGTACT 59.547 41.667 0.00 0.00 37.82 2.73
1530 1562 4.715896 CACACTTCAGCACAATCATGTAC 58.284 43.478 0.00 0.00 37.82 2.90
1531 1563 3.189080 GCACACTTCAGCACAATCATGTA 59.811 43.478 0.00 0.00 37.82 2.29
1532 1564 2.030540 GCACACTTCAGCACAATCATGT 60.031 45.455 0.00 0.00 41.61 3.21
1533 1565 2.228103 AGCACACTTCAGCACAATCATG 59.772 45.455 0.00 0.00 0.00 3.07
1537 1569 0.956633 CCAGCACACTTCAGCACAAT 59.043 50.000 0.00 0.00 0.00 2.71
1617 1651 9.304731 CATGTTAATGAATAAACCCAACTCATG 57.695 33.333 0.00 0.00 35.67 3.07
1618 1652 7.981225 GCATGTTAATGAATAAACCCAACTCAT 59.019 33.333 0.00 0.00 35.67 2.90
1619 1653 7.039434 TGCATGTTAATGAATAAACCCAACTCA 60.039 33.333 0.00 0.00 35.67 3.41
1620 1654 7.319646 TGCATGTTAATGAATAAACCCAACTC 58.680 34.615 0.00 0.00 35.67 3.01
1621 1655 7.238486 TGCATGTTAATGAATAAACCCAACT 57.762 32.000 0.00 0.00 35.67 3.16
1622 1656 7.412891 GCTTGCATGTTAATGAATAAACCCAAC 60.413 37.037 1.14 0.00 35.67 3.77
1631 1665 5.149973 TGGTTGCTTGCATGTTAATGAAT 57.850 34.783 1.14 0.00 35.67 2.57
1633 1667 4.597404 TTGGTTGCTTGCATGTTAATGA 57.403 36.364 1.14 0.00 35.67 2.57
1636 1670 3.868077 GTGTTTGGTTGCTTGCATGTTAA 59.132 39.130 1.14 0.00 0.00 2.01
1646 1680 1.340991 ACTGTCTGGTGTTTGGTTGCT 60.341 47.619 0.00 0.00 0.00 3.91
1662 1696 1.830279 CATGGGCTGAATCACACTGT 58.170 50.000 0.00 0.00 0.00 3.55
1670 1704 0.535335 CTTGCTTGCATGGGCTGAAT 59.465 50.000 1.34 0.00 41.91 2.57
1684 1718 1.980772 GGTTGCATGCCCTCTTGCT 60.981 57.895 16.68 0.00 42.07 3.91
1715 1753 2.241160 TGCAGTCTCAAATGCACCATT 58.759 42.857 0.00 0.00 46.97 3.16
1730 1768 6.071108 ACTCAGTCTGACTATACAAATGCAGT 60.071 38.462 10.47 0.00 0.00 4.40
1745 1783 3.898123 ACAGCCTTCTTAACTCAGTCTGA 59.102 43.478 1.78 1.78 0.00 3.27
1749 1787 5.546621 TTACACAGCCTTCTTAACTCAGT 57.453 39.130 0.00 0.00 0.00 3.41
1766 1804 6.237490 CGTAGTTTACAGTAGCTGCATTACAC 60.237 42.308 4.12 0.00 34.37 2.90
1769 1807 6.198650 TCGTAGTTTACAGTAGCTGCATTA 57.801 37.500 4.12 0.00 34.37 1.90
1785 1823 0.939419 GGCGTGTTTGGTTCGTAGTT 59.061 50.000 0.00 0.00 0.00 2.24
1810 1850 0.386352 CCGGCTTGCAATGCATATCG 60.386 55.000 9.39 12.58 38.76 2.92
1814 1854 4.151582 GGCCGGCTTGCAATGCAT 62.152 61.111 28.56 0.00 38.76 3.96
1816 1856 4.807039 CTGGCCGGCTTGCAATGC 62.807 66.667 28.56 7.32 36.06 3.56
1817 1857 4.137872 CCTGGCCGGCTTGCAATG 62.138 66.667 28.56 6.20 0.00 2.82
1835 1875 3.260483 GTCGCGATGGCAGCTCAG 61.260 66.667 14.06 0.00 39.92 3.35
1836 1876 4.067913 TGTCGCGATGGCAGCTCA 62.068 61.111 14.06 0.00 39.92 4.26
1837 1877 3.558411 GTGTCGCGATGGCAGCTC 61.558 66.667 14.06 0.00 39.92 4.09
1838 1878 4.074526 AGTGTCGCGATGGCAGCT 62.075 61.111 14.06 3.45 39.92 4.24
1839 1879 3.857854 CAGTGTCGCGATGGCAGC 61.858 66.667 14.06 0.00 39.92 5.25
1840 1880 1.520120 ATCAGTGTCGCGATGGCAG 60.520 57.895 14.06 2.75 39.92 4.85
1841 1881 1.810853 CATCAGTGTCGCGATGGCA 60.811 57.895 14.06 2.08 39.92 4.92
1842 1882 0.527600 TACATCAGTGTCGCGATGGC 60.528 55.000 14.06 5.69 42.72 4.40
1843 1883 1.200483 GTACATCAGTGTCGCGATGG 58.800 55.000 14.06 2.16 42.72 3.51
1844 1884 1.848608 CTGTACATCAGTGTCGCGATG 59.151 52.381 14.06 7.03 43.78 3.84
1845 1885 1.799181 GCTGTACATCAGTGTCGCGAT 60.799 52.381 14.06 0.00 45.23 4.58
1846 1886 0.456142 GCTGTACATCAGTGTCGCGA 60.456 55.000 3.71 3.71 45.23 5.87
1847 1887 1.733416 CGCTGTACATCAGTGTCGCG 61.733 60.000 0.00 0.00 46.12 5.87
1848 1888 1.991430 CGCTGTACATCAGTGTCGC 59.009 57.895 0.00 0.00 46.12 5.19
1853 1893 1.135139 CAGTAGCCGCTGTACATCAGT 59.865 52.381 2.16 0.00 45.23 3.41
1854 1894 1.845266 CAGTAGCCGCTGTACATCAG 58.155 55.000 2.16 0.00 46.12 2.90
1855 1895 0.179111 GCAGTAGCCGCTGTACATCA 60.179 55.000 2.16 0.00 38.65 3.07
1856 1896 0.179111 TGCAGTAGCCGCTGTACATC 60.179 55.000 2.16 0.00 41.13 3.06
1857 1897 0.465705 ATGCAGTAGCCGCTGTACAT 59.534 50.000 2.16 0.00 41.13 2.29
1858 1898 0.460109 CATGCAGTAGCCGCTGTACA 60.460 55.000 2.16 0.00 41.13 2.90
1859 1899 0.460284 ACATGCAGTAGCCGCTGTAC 60.460 55.000 2.16 0.00 41.13 2.90
1860 1900 0.179111 GACATGCAGTAGCCGCTGTA 60.179 55.000 2.16 3.15 41.13 2.74
1861 1901 1.448540 GACATGCAGTAGCCGCTGT 60.449 57.895 2.16 0.00 41.13 4.40
1862 1902 1.150567 GAGACATGCAGTAGCCGCTG 61.151 60.000 2.16 1.17 41.13 5.18
1863 1903 1.142748 GAGACATGCAGTAGCCGCT 59.857 57.895 0.00 0.00 41.13 5.52
1864 1904 2.233654 CGAGACATGCAGTAGCCGC 61.234 63.158 0.00 0.00 41.13 6.53
1865 1905 0.867753 GACGAGACATGCAGTAGCCG 60.868 60.000 0.00 0.00 41.13 5.52
1866 1906 0.457851 AGACGAGACATGCAGTAGCC 59.542 55.000 0.00 0.00 41.13 3.93
1867 1907 1.554392 CAGACGAGACATGCAGTAGC 58.446 55.000 0.00 0.00 42.57 3.58
1868 1908 1.800655 GCCAGACGAGACATGCAGTAG 60.801 57.143 0.00 0.00 0.00 2.57
1869 1909 0.173481 GCCAGACGAGACATGCAGTA 59.827 55.000 0.00 0.00 0.00 2.74
1870 1910 1.079543 GCCAGACGAGACATGCAGT 60.080 57.895 0.00 0.00 0.00 4.40
1871 1911 0.461516 ATGCCAGACGAGACATGCAG 60.462 55.000 0.00 0.00 31.53 4.41
1872 1912 0.741927 CATGCCAGACGAGACATGCA 60.742 55.000 0.00 0.00 34.11 3.96
1873 1913 1.434622 CCATGCCAGACGAGACATGC 61.435 60.000 0.00 0.00 38.83 4.06
1874 1914 0.107993 ACCATGCCAGACGAGACATG 60.108 55.000 0.00 0.00 39.65 3.21
1875 1915 0.615331 AACCATGCCAGACGAGACAT 59.385 50.000 0.00 0.00 0.00 3.06
1876 1916 1.262417 TAACCATGCCAGACGAGACA 58.738 50.000 0.00 0.00 0.00 3.41
1877 1917 2.380084 TTAACCATGCCAGACGAGAC 57.620 50.000 0.00 0.00 0.00 3.36
1878 1918 2.037902 TGTTTAACCATGCCAGACGAGA 59.962 45.455 0.00 0.00 0.00 4.04
1879 1919 2.416547 CTGTTTAACCATGCCAGACGAG 59.583 50.000 0.00 0.00 0.00 4.18
1880 1920 2.037902 TCTGTTTAACCATGCCAGACGA 59.962 45.455 0.00 0.00 0.00 4.20
1881 1921 2.416547 CTCTGTTTAACCATGCCAGACG 59.583 50.000 0.00 0.00 0.00 4.18
1882 1922 2.162408 GCTCTGTTTAACCATGCCAGAC 59.838 50.000 0.00 0.00 0.00 3.51
1883 1923 2.040278 AGCTCTGTTTAACCATGCCAGA 59.960 45.455 0.00 0.00 0.00 3.86
1884 1924 2.440409 AGCTCTGTTTAACCATGCCAG 58.560 47.619 0.00 0.00 0.00 4.85
1885 1925 2.584835 AGCTCTGTTTAACCATGCCA 57.415 45.000 0.00 0.00 0.00 4.92
1886 1926 3.565902 GGATAGCTCTGTTTAACCATGCC 59.434 47.826 0.00 0.00 0.00 4.40
1887 1927 4.199310 TGGATAGCTCTGTTTAACCATGC 58.801 43.478 0.00 0.00 0.00 4.06
1888 1928 6.757897 TTTGGATAGCTCTGTTTAACCATG 57.242 37.500 0.00 0.00 0.00 3.66
1889 1929 7.175104 TCTTTTGGATAGCTCTGTTTAACCAT 58.825 34.615 0.00 0.00 0.00 3.55
1890 1930 6.539173 TCTTTTGGATAGCTCTGTTTAACCA 58.461 36.000 0.00 0.00 0.00 3.67
1891 1931 7.448748 TTCTTTTGGATAGCTCTGTTTAACC 57.551 36.000 0.00 0.00 0.00 2.85
1892 1932 9.399403 CTTTTCTTTTGGATAGCTCTGTTTAAC 57.601 33.333 0.00 0.00 0.00 2.01
1893 1933 9.131791 ACTTTTCTTTTGGATAGCTCTGTTTAA 57.868 29.630 0.00 0.00 0.00 1.52
1894 1934 8.691661 ACTTTTCTTTTGGATAGCTCTGTTTA 57.308 30.769 0.00 0.00 0.00 2.01
1895 1935 7.588497 ACTTTTCTTTTGGATAGCTCTGTTT 57.412 32.000 0.00 0.00 0.00 2.83
1896 1936 8.691661 TTACTTTTCTTTTGGATAGCTCTGTT 57.308 30.769 0.00 0.00 0.00 3.16
1897 1937 8.691661 TTTACTTTTCTTTTGGATAGCTCTGT 57.308 30.769 0.00 0.00 0.00 3.41
1898 1938 9.965824 TTTTTACTTTTCTTTTGGATAGCTCTG 57.034 29.630 0.00 0.00 0.00 3.35
1899 1939 9.967346 GTTTTTACTTTTCTTTTGGATAGCTCT 57.033 29.630 0.00 0.00 0.00 4.09
1900 1940 9.744468 TGTTTTTACTTTTCTTTTGGATAGCTC 57.256 29.630 0.00 0.00 0.00 4.09
1911 1951 9.893305 CGATGGTATCTTGTTTTTACTTTTCTT 57.107 29.630 0.00 0.00 0.00 2.52
1912 1952 9.063615 ACGATGGTATCTTGTTTTTACTTTTCT 57.936 29.630 0.00 0.00 0.00 2.52
1913 1953 9.673454 AACGATGGTATCTTGTTTTTACTTTTC 57.327 29.630 0.00 0.00 0.00 2.29
1914 1954 9.673454 GAACGATGGTATCTTGTTTTTACTTTT 57.327 29.630 0.00 0.00 0.00 2.27
1915 1955 9.063615 AGAACGATGGTATCTTGTTTTTACTTT 57.936 29.630 0.00 0.00 0.00 2.66
1916 1956 8.617290 AGAACGATGGTATCTTGTTTTTACTT 57.383 30.769 0.00 0.00 0.00 2.24
1917 1957 9.367444 CTAGAACGATGGTATCTTGTTTTTACT 57.633 33.333 0.00 0.00 0.00 2.24
1918 1958 9.362539 TCTAGAACGATGGTATCTTGTTTTTAC 57.637 33.333 0.00 0.00 0.00 2.01
1919 1959 9.932207 TTCTAGAACGATGGTATCTTGTTTTTA 57.068 29.630 0.00 0.00 0.00 1.52
1920 1960 8.842358 TTCTAGAACGATGGTATCTTGTTTTT 57.158 30.769 0.00 0.00 0.00 1.94
1921 1961 8.842358 TTTCTAGAACGATGGTATCTTGTTTT 57.158 30.769 4.18 0.00 0.00 2.43
1922 1962 8.842358 TTTTCTAGAACGATGGTATCTTGTTT 57.158 30.769 4.18 0.00 0.00 2.83
1923 1963 8.842358 TTTTTCTAGAACGATGGTATCTTGTT 57.158 30.769 4.18 0.00 0.00 2.83
1945 1985 5.602145 TCCAAGGAAATGTGGACTCATTTTT 59.398 36.000 12.03 3.50 44.62 1.94
1946 1986 5.147032 TCCAAGGAAATGTGGACTCATTTT 58.853 37.500 12.03 0.00 44.62 1.82
1947 1987 4.739793 TCCAAGGAAATGTGGACTCATTT 58.260 39.130 10.94 10.94 46.41 2.32
1948 1988 4.338879 CTCCAAGGAAATGTGGACTCATT 58.661 43.478 0.00 0.00 39.04 2.57
1949 1989 3.308688 CCTCCAAGGAAATGTGGACTCAT 60.309 47.826 0.00 0.00 39.04 2.90
1950 1990 2.040278 CCTCCAAGGAAATGTGGACTCA 59.960 50.000 0.00 0.00 39.04 3.41
1951 1991 2.305927 TCCTCCAAGGAAATGTGGACTC 59.694 50.000 0.00 0.00 42.51 3.36
1952 1992 2.348472 TCCTCCAAGGAAATGTGGACT 58.652 47.619 0.00 0.00 42.51 3.85
1953 1993 2.879103 TCCTCCAAGGAAATGTGGAC 57.121 50.000 0.00 0.00 42.51 4.02
1962 2002 1.286849 TCCGTAGATGTCCTCCAAGGA 59.713 52.381 0.00 0.00 43.43 3.36
1963 2003 1.683917 CTCCGTAGATGTCCTCCAAGG 59.316 57.143 0.00 0.00 36.46 3.61
1964 2004 1.683917 CCTCCGTAGATGTCCTCCAAG 59.316 57.143 0.00 0.00 0.00 3.61
1965 2005 1.286849 TCCTCCGTAGATGTCCTCCAA 59.713 52.381 0.00 0.00 0.00 3.53
1966 2006 0.924090 TCCTCCGTAGATGTCCTCCA 59.076 55.000 0.00 0.00 0.00 3.86
1967 2007 2.068834 TTCCTCCGTAGATGTCCTCC 57.931 55.000 0.00 0.00 0.00 4.30
1968 2008 3.223435 TGATTCCTCCGTAGATGTCCTC 58.777 50.000 0.00 0.00 0.00 3.71
1969 2009 3.314307 TGATTCCTCCGTAGATGTCCT 57.686 47.619 0.00 0.00 0.00 3.85
1970 2010 4.608948 ATTGATTCCTCCGTAGATGTCC 57.391 45.455 0.00 0.00 0.00 4.02
1971 2011 6.927294 AAAATTGATTCCTCCGTAGATGTC 57.073 37.500 0.00 0.00 0.00 3.06
1994 2034 1.745653 TGTCGATGCACACACCAAAAA 59.254 42.857 0.00 0.00 0.00 1.94
1995 2035 1.064803 GTGTCGATGCACACACCAAAA 59.935 47.619 12.42 0.00 45.25 2.44
1996 2036 0.660488 GTGTCGATGCACACACCAAA 59.340 50.000 12.42 0.00 45.25 3.28
1997 2037 2.316237 GTGTCGATGCACACACCAA 58.684 52.632 12.42 0.00 45.25 3.67
1998 2038 4.041617 GTGTCGATGCACACACCA 57.958 55.556 12.42 0.00 45.25 4.17
2003 2043 1.953642 CCGTGTGTGTCGATGCACA 60.954 57.895 17.27 17.27 45.85 4.57
2004 2044 1.617755 CTCCGTGTGTGTCGATGCAC 61.618 60.000 13.25 13.25 39.65 4.57
2005 2045 1.372872 CTCCGTGTGTGTCGATGCA 60.373 57.895 0.00 0.00 0.00 3.96
2006 2046 2.094659 CCTCCGTGTGTGTCGATGC 61.095 63.158 0.00 0.00 0.00 3.91
2007 2047 0.038618 TTCCTCCGTGTGTGTCGATG 60.039 55.000 0.00 0.00 0.00 3.84
2008 2048 0.895530 ATTCCTCCGTGTGTGTCGAT 59.104 50.000 0.00 0.00 0.00 3.59
2009 2049 0.242825 GATTCCTCCGTGTGTGTCGA 59.757 55.000 0.00 0.00 0.00 4.20
2010 2050 0.243907 AGATTCCTCCGTGTGTGTCG 59.756 55.000 0.00 0.00 0.00 4.35
2011 2051 2.457366 AAGATTCCTCCGTGTGTGTC 57.543 50.000 0.00 0.00 0.00 3.67
2012 2052 4.710375 ACTATAAGATTCCTCCGTGTGTGT 59.290 41.667 0.00 0.00 0.00 3.72
2013 2053 5.263968 ACTATAAGATTCCTCCGTGTGTG 57.736 43.478 0.00 0.00 0.00 3.82
2014 2054 5.934402 AACTATAAGATTCCTCCGTGTGT 57.066 39.130 0.00 0.00 0.00 3.72
2015 2055 7.490000 ACTAAACTATAAGATTCCTCCGTGTG 58.510 38.462 0.00 0.00 0.00 3.82
2016 2056 7.657023 ACTAAACTATAAGATTCCTCCGTGT 57.343 36.000 0.00 0.00 0.00 4.49
2017 2057 8.848182 AGTACTAAACTATAAGATTCCTCCGTG 58.152 37.037 0.00 0.00 36.36 4.94
2018 2058 8.993404 AGTACTAAACTATAAGATTCCTCCGT 57.007 34.615 0.00 0.00 36.36 4.69
2019 2059 9.287373 AGAGTACTAAACTATAAGATTCCTCCG 57.713 37.037 0.00 0.00 39.07 4.63
2033 2073 9.201127 GGAAACACGAAAATAGAGTACTAAACT 57.799 33.333 0.00 0.00 42.80 2.66
2034 2074 9.201127 AGGAAACACGAAAATAGAGTACTAAAC 57.799 33.333 0.00 0.00 32.04 2.01
2035 2075 9.768662 AAGGAAACACGAAAATAGAGTACTAAA 57.231 29.630 0.00 0.00 32.04 1.85
2036 2076 9.199982 CAAGGAAACACGAAAATAGAGTACTAA 57.800 33.333 0.00 0.00 32.04 2.24
2037 2077 8.362639 ACAAGGAAACACGAAAATAGAGTACTA 58.637 33.333 0.00 0.00 0.00 1.82
2038 2078 7.215085 ACAAGGAAACACGAAAATAGAGTACT 58.785 34.615 0.00 0.00 0.00 2.73
2039 2079 7.417496 ACAAGGAAACACGAAAATAGAGTAC 57.583 36.000 0.00 0.00 0.00 2.73
2041 2081 9.886132 ATATACAAGGAAACACGAAAATAGAGT 57.114 29.630 0.00 0.00 0.00 3.24
2046 2086 8.674607 GGAGAATATACAAGGAAACACGAAAAT 58.325 33.333 0.00 0.00 0.00 1.82
2047 2087 7.148540 CGGAGAATATACAAGGAAACACGAAAA 60.149 37.037 0.00 0.00 0.00 2.29
2048 2088 6.311935 CGGAGAATATACAAGGAAACACGAAA 59.688 38.462 0.00 0.00 0.00 3.46
2049 2089 5.808540 CGGAGAATATACAAGGAAACACGAA 59.191 40.000 0.00 0.00 0.00 3.85
2050 2090 5.105635 ACGGAGAATATACAAGGAAACACGA 60.106 40.000 0.00 0.00 0.00 4.35
2051 2091 5.005394 CACGGAGAATATACAAGGAAACACG 59.995 44.000 0.00 0.00 0.00 4.49
2052 2092 5.220605 GCACGGAGAATATACAAGGAAACAC 60.221 44.000 0.00 0.00 0.00 3.32
2053 2093 4.873827 GCACGGAGAATATACAAGGAAACA 59.126 41.667 0.00 0.00 0.00 2.83
2054 2094 4.025979 CGCACGGAGAATATACAAGGAAAC 60.026 45.833 0.00 0.00 0.00 2.78
2055 2095 4.116961 CGCACGGAGAATATACAAGGAAA 58.883 43.478 0.00 0.00 0.00 3.13
2056 2096 3.131577 ACGCACGGAGAATATACAAGGAA 59.868 43.478 0.00 0.00 0.00 3.36
2057 2097 2.691526 ACGCACGGAGAATATACAAGGA 59.308 45.455 0.00 0.00 0.00 3.36
2058 2098 2.794910 CACGCACGGAGAATATACAAGG 59.205 50.000 0.00 0.00 0.00 3.61
2059 2099 3.444916 ACACGCACGGAGAATATACAAG 58.555 45.455 0.00 0.00 0.00 3.16
2060 2100 3.513680 ACACGCACGGAGAATATACAA 57.486 42.857 0.00 0.00 0.00 2.41
2061 2101 4.841443 ATACACGCACGGAGAATATACA 57.159 40.909 0.00 0.00 0.00 2.29
2062 2102 5.692814 TGTATACACGCACGGAGAATATAC 58.307 41.667 0.08 0.00 0.00 1.47
2063 2103 5.945466 TGTATACACGCACGGAGAATATA 57.055 39.130 0.08 0.00 0.00 0.86
2064 2104 4.841443 TGTATACACGCACGGAGAATAT 57.159 40.909 0.08 0.00 0.00 1.28
2065 2105 4.841443 ATGTATACACGCACGGAGAATA 57.159 40.909 7.96 0.00 0.00 1.75
2066 2106 3.728076 ATGTATACACGCACGGAGAAT 57.272 42.857 7.96 0.00 0.00 2.40
2067 2107 4.841443 ATATGTATACACGCACGGAGAA 57.159 40.909 7.96 0.00 0.00 2.87
2068 2108 4.393990 CCTATATGTATACACGCACGGAGA 59.606 45.833 7.96 0.00 0.00 3.71
2069 2109 4.393990 TCCTATATGTATACACGCACGGAG 59.606 45.833 7.96 0.00 0.00 4.63
2070 2110 4.325972 TCCTATATGTATACACGCACGGA 58.674 43.478 7.96 8.01 0.00 4.69
2071 2111 4.690184 TCCTATATGTATACACGCACGG 57.310 45.455 7.96 5.79 0.00 4.94
2072 2112 6.120378 AGATCCTATATGTATACACGCACG 57.880 41.667 7.96 0.00 0.00 5.34
2073 2113 6.752351 CCAAGATCCTATATGTATACACGCAC 59.248 42.308 7.96 0.00 0.00 5.34
2074 2114 6.661805 TCCAAGATCCTATATGTATACACGCA 59.338 38.462 7.96 0.00 0.00 5.24
2075 2115 6.973474 GTCCAAGATCCTATATGTATACACGC 59.027 42.308 7.96 0.00 0.00 5.34
2076 2116 8.184848 CAGTCCAAGATCCTATATGTATACACG 58.815 40.741 7.96 0.00 0.00 4.49
2077 2117 7.976734 GCAGTCCAAGATCCTATATGTATACAC 59.023 40.741 7.96 0.00 0.00 2.90
2078 2118 7.673926 TGCAGTCCAAGATCCTATATGTATACA 59.326 37.037 8.27 8.27 0.00 2.29
2079 2119 8.067751 TGCAGTCCAAGATCCTATATGTATAC 57.932 38.462 0.00 0.00 0.00 1.47
2080 2120 8.664669 TTGCAGTCCAAGATCCTATATGTATA 57.335 34.615 0.00 0.00 0.00 1.47
2081 2121 7.559335 TTGCAGTCCAAGATCCTATATGTAT 57.441 36.000 0.00 0.00 0.00 2.29
2082 2122 6.994421 TTGCAGTCCAAGATCCTATATGTA 57.006 37.500 0.00 0.00 0.00 2.29
2083 2123 5.894298 TTGCAGTCCAAGATCCTATATGT 57.106 39.130 0.00 0.00 0.00 2.29
2084 2124 6.294473 ACTTTGCAGTCCAAGATCCTATATG 58.706 40.000 2.92 0.00 34.34 1.78
2085 2125 6.506538 ACTTTGCAGTCCAAGATCCTATAT 57.493 37.500 2.92 0.00 34.34 0.86
2086 2126 5.957771 ACTTTGCAGTCCAAGATCCTATA 57.042 39.130 2.92 0.00 34.34 1.31
2087 2127 4.851639 ACTTTGCAGTCCAAGATCCTAT 57.148 40.909 2.92 0.00 34.34 2.57
2088 2128 5.957771 ATACTTTGCAGTCCAAGATCCTA 57.042 39.130 2.92 0.00 34.34 2.94
2089 2129 4.851639 ATACTTTGCAGTCCAAGATCCT 57.148 40.909 2.92 0.00 34.34 3.24
2090 2130 7.420800 CAAATATACTTTGCAGTCCAAGATCC 58.579 38.462 2.92 0.00 34.34 3.36
2115 2155 3.543680 TTACTCCTTGATGCCACTAGC 57.456 47.619 0.00 0.00 44.14 3.42
2116 2156 5.220931 GCAATTTACTCCTTGATGCCACTAG 60.221 44.000 0.00 0.00 0.00 2.57
2117 2157 4.640201 GCAATTTACTCCTTGATGCCACTA 59.360 41.667 0.00 0.00 0.00 2.74
2118 2158 3.445096 GCAATTTACTCCTTGATGCCACT 59.555 43.478 0.00 0.00 0.00 4.00
2119 2159 3.193267 TGCAATTTACTCCTTGATGCCAC 59.807 43.478 0.00 0.00 0.00 5.01
2120 2160 3.429492 TGCAATTTACTCCTTGATGCCA 58.571 40.909 0.00 0.00 0.00 4.92
2121 2161 4.660789 ATGCAATTTACTCCTTGATGCC 57.339 40.909 0.00 0.00 0.00 4.40
2122 2162 7.010460 GGTTTTATGCAATTTACTCCTTGATGC 59.990 37.037 0.00 0.00 0.00 3.91
2123 2163 8.034215 TGGTTTTATGCAATTTACTCCTTGATG 58.966 33.333 0.00 0.00 0.00 3.07
2124 2164 8.133024 TGGTTTTATGCAATTTACTCCTTGAT 57.867 30.769 0.00 0.00 0.00 2.57
2125 2165 7.531857 TGGTTTTATGCAATTTACTCCTTGA 57.468 32.000 0.00 0.00 0.00 3.02
2126 2166 8.034215 TGATGGTTTTATGCAATTTACTCCTTG 58.966 33.333 0.00 0.00 0.00 3.61
2127 2167 8.034804 GTGATGGTTTTATGCAATTTACTCCTT 58.965 33.333 0.00 0.00 0.00 3.36
2128 2168 7.397192 AGTGATGGTTTTATGCAATTTACTCCT 59.603 33.333 0.00 0.00 0.00 3.69
2129 2169 7.547227 AGTGATGGTTTTATGCAATTTACTCC 58.453 34.615 0.00 0.00 0.00 3.85
2130 2170 8.986477 AAGTGATGGTTTTATGCAATTTACTC 57.014 30.769 0.00 0.00 0.00 2.59
2131 2171 9.206870 CAAAGTGATGGTTTTATGCAATTTACT 57.793 29.630 0.00 0.00 0.00 2.24
2132 2172 9.202273 TCAAAGTGATGGTTTTATGCAATTTAC 57.798 29.630 0.00 0.00 0.00 2.01
2133 2173 9.421806 CTCAAAGTGATGGTTTTATGCAATTTA 57.578 29.630 0.00 0.00 0.00 1.40
2134 2174 7.388500 CCTCAAAGTGATGGTTTTATGCAATTT 59.612 33.333 0.00 0.00 0.00 1.82
2135 2175 6.875195 CCTCAAAGTGATGGTTTTATGCAATT 59.125 34.615 0.00 0.00 0.00 2.32
2136 2176 6.400568 CCTCAAAGTGATGGTTTTATGCAAT 58.599 36.000 0.00 0.00 0.00 3.56
2137 2177 5.279406 CCCTCAAAGTGATGGTTTTATGCAA 60.279 40.000 0.00 0.00 29.02 4.08
2138 2178 4.220382 CCCTCAAAGTGATGGTTTTATGCA 59.780 41.667 0.00 0.00 29.02 3.96
2139 2179 4.747810 CCCTCAAAGTGATGGTTTTATGC 58.252 43.478 0.00 0.00 29.02 3.14
2140 2180 4.463891 AGCCCTCAAAGTGATGGTTTTATG 59.536 41.667 2.18 0.00 35.03 1.90
2141 2181 4.677182 AGCCCTCAAAGTGATGGTTTTAT 58.323 39.130 2.18 0.00 35.03 1.40
2142 2182 4.112634 AGCCCTCAAAGTGATGGTTTTA 57.887 40.909 2.18 0.00 35.03 1.52
2143 2183 2.962859 AGCCCTCAAAGTGATGGTTTT 58.037 42.857 2.18 0.00 35.03 2.43
2144 2184 2.683211 AGCCCTCAAAGTGATGGTTT 57.317 45.000 2.18 0.00 35.03 3.27
2145 2185 2.025887 CCTAGCCCTCAAAGTGATGGTT 60.026 50.000 2.18 0.00 35.03 3.67
2146 2186 1.561542 CCTAGCCCTCAAAGTGATGGT 59.438 52.381 2.18 0.00 35.03 3.55
2147 2187 1.561542 ACCTAGCCCTCAAAGTGATGG 59.438 52.381 0.00 0.00 35.58 3.51
2148 2188 3.356529 AACCTAGCCCTCAAAGTGATG 57.643 47.619 0.00 0.00 0.00 3.07
2149 2189 3.690460 CAAACCTAGCCCTCAAAGTGAT 58.310 45.455 0.00 0.00 0.00 3.06
2150 2190 2.814097 GCAAACCTAGCCCTCAAAGTGA 60.814 50.000 0.00 0.00 0.00 3.41
2151 2191 1.541588 GCAAACCTAGCCCTCAAAGTG 59.458 52.381 0.00 0.00 0.00 3.16
2152 2192 1.882352 CGCAAACCTAGCCCTCAAAGT 60.882 52.381 0.00 0.00 0.00 2.66
2153 2193 0.804989 CGCAAACCTAGCCCTCAAAG 59.195 55.000 0.00 0.00 0.00 2.77
2154 2194 0.398696 TCGCAAACCTAGCCCTCAAA 59.601 50.000 0.00 0.00 0.00 2.69
2155 2195 0.398696 TTCGCAAACCTAGCCCTCAA 59.601 50.000 0.00 0.00 0.00 3.02
2156 2196 0.398696 TTTCGCAAACCTAGCCCTCA 59.601 50.000 0.00 0.00 0.00 3.86
2157 2197 1.530323 TTTTCGCAAACCTAGCCCTC 58.470 50.000 0.00 0.00 0.00 4.30
2158 2198 1.611977 GTTTTTCGCAAACCTAGCCCT 59.388 47.619 0.00 0.00 0.00 5.19
2159 2199 1.338655 TGTTTTTCGCAAACCTAGCCC 59.661 47.619 7.37 0.00 0.00 5.19
2160 2200 2.034179 AGTGTTTTTCGCAAACCTAGCC 59.966 45.455 7.37 0.00 0.00 3.93
2161 2201 3.349488 AGTGTTTTTCGCAAACCTAGC 57.651 42.857 7.37 0.00 0.00 3.42
2162 2202 6.295039 TCTTAGTGTTTTTCGCAAACCTAG 57.705 37.500 7.37 0.00 0.00 3.02
2163 2203 6.870971 ATCTTAGTGTTTTTCGCAAACCTA 57.129 33.333 7.37 6.12 0.00 3.08
2164 2204 5.767816 ATCTTAGTGTTTTTCGCAAACCT 57.232 34.783 7.37 6.83 0.00 3.50
2165 2205 6.432107 TGTATCTTAGTGTTTTTCGCAAACC 58.568 36.000 7.37 0.00 0.00 3.27
2166 2206 7.130269 ACTGTATCTTAGTGTTTTTCGCAAAC 58.870 34.615 3.73 3.73 0.00 2.93
2167 2207 7.254227 ACTGTATCTTAGTGTTTTTCGCAAA 57.746 32.000 0.00 0.00 0.00 3.68
2168 2208 6.854496 ACTGTATCTTAGTGTTTTTCGCAA 57.146 33.333 0.00 0.00 0.00 4.85
2169 2209 6.854496 AACTGTATCTTAGTGTTTTTCGCA 57.146 33.333 0.00 0.00 0.00 5.10
2170 2210 7.573627 AGAAACTGTATCTTAGTGTTTTTCGC 58.426 34.615 0.00 0.00 32.01 4.70
2171 2211 8.979574 AGAGAAACTGTATCTTAGTGTTTTTCG 58.020 33.333 0.00 0.00 37.06 3.46
2198 2238 0.040958 CAAGACGTGGTGCTTTCTGC 60.041 55.000 0.00 0.00 43.25 4.26
2199 2239 0.040958 GCAAGACGTGGTGCTTTCTG 60.041 55.000 11.80 0.00 37.78 3.02
2200 2240 1.498865 CGCAAGACGTGGTGCTTTCT 61.499 55.000 15.79 0.00 38.66 2.52
2201 2241 1.082756 CGCAAGACGTGGTGCTTTC 60.083 57.895 15.79 0.00 38.66 2.62
2202 2242 3.022287 CGCAAGACGTGGTGCTTT 58.978 55.556 15.79 0.00 38.66 3.51
2212 2252 5.881637 TTTGCAAAAGAATTACGCAAGAC 57.118 34.783 10.02 0.00 42.91 3.01
2213 2253 6.237969 GGTTTTTGCAAAAGAATTACGCAAGA 60.238 34.615 22.78 2.62 42.91 3.02
2214 2254 5.901336 GGTTTTTGCAAAAGAATTACGCAAG 59.099 36.000 22.78 0.00 42.91 4.01
2215 2255 5.351465 TGGTTTTTGCAAAAGAATTACGCAA 59.649 32.000 22.78 3.33 40.59 4.85
2216 2256 4.870426 TGGTTTTTGCAAAAGAATTACGCA 59.130 33.333 22.78 14.61 0.00 5.24
2217 2257 5.194657 GTGGTTTTTGCAAAAGAATTACGC 58.805 37.500 22.78 13.52 0.00 4.42
2218 2258 5.555443 CGGTGGTTTTTGCAAAAGAATTACG 60.555 40.000 22.78 19.05 0.00 3.18
2219 2259 5.520649 TCGGTGGTTTTTGCAAAAGAATTAC 59.479 36.000 22.78 17.48 0.00 1.89
2220 2260 5.661458 TCGGTGGTTTTTGCAAAAGAATTA 58.339 33.333 22.78 6.91 0.00 1.40
2221 2261 4.508662 TCGGTGGTTTTTGCAAAAGAATT 58.491 34.783 22.78 0.00 0.00 2.17
2222 2262 4.130286 TCGGTGGTTTTTGCAAAAGAAT 57.870 36.364 22.78 0.00 0.00 2.40
2223 2263 3.594603 TCGGTGGTTTTTGCAAAAGAA 57.405 38.095 22.78 8.38 0.00 2.52
2224 2264 3.712187 GATCGGTGGTTTTTGCAAAAGA 58.288 40.909 22.78 16.19 0.00 2.52
2225 2265 2.470999 CGATCGGTGGTTTTTGCAAAAG 59.529 45.455 22.78 11.68 0.00 2.27
2226 2266 2.464865 CGATCGGTGGTTTTTGCAAAA 58.535 42.857 20.46 20.46 0.00 2.44
2227 2267 1.269309 CCGATCGGTGGTTTTTGCAAA 60.269 47.619 26.35 8.05 0.00 3.68
2228 2268 0.312416 CCGATCGGTGGTTTTTGCAA 59.688 50.000 26.35 0.00 0.00 4.08
2229 2269 1.953017 CCGATCGGTGGTTTTTGCA 59.047 52.632 26.35 0.00 0.00 4.08
2230 2270 1.443702 GCCGATCGGTGGTTTTTGC 60.444 57.895 33.33 13.31 37.65 3.68
2231 2271 1.154301 CGCCGATCGGTGGTTTTTG 60.154 57.895 34.87 12.30 41.75 2.44
2232 2272 3.259930 CGCCGATCGGTGGTTTTT 58.740 55.556 34.87 0.00 41.75 1.94
2249 2289 2.354074 TACTTAACGCGGCCCGATCC 62.354 60.000 18.74 0.00 41.02 3.36
2250 2290 0.528249 TTACTTAACGCGGCCCGATC 60.528 55.000 18.74 0.00 41.02 3.69
2251 2291 0.529119 CTTACTTAACGCGGCCCGAT 60.529 55.000 18.74 10.51 41.02 4.18
2252 2292 1.153784 CTTACTTAACGCGGCCCGA 60.154 57.895 18.74 0.00 41.02 5.14
2253 2293 1.015607 AACTTACTTAACGCGGCCCG 61.016 55.000 12.47 11.48 44.21 6.13
2254 2294 1.159285 AAACTTACTTAACGCGGCCC 58.841 50.000 12.47 0.00 0.00 5.80
2255 2295 3.618150 TCATAAACTTACTTAACGCGGCC 59.382 43.478 12.47 0.00 0.00 6.13
2256 2296 4.091800 TGTCATAAACTTACTTAACGCGGC 59.908 41.667 12.47 0.00 0.00 6.53
2257 2297 5.346822 ACTGTCATAAACTTACTTAACGCGG 59.653 40.000 12.47 0.00 0.00 6.46
2258 2298 6.385537 ACTGTCATAAACTTACTTAACGCG 57.614 37.500 3.53 3.53 0.00 6.01
2259 2299 7.013529 CCAACTGTCATAAACTTACTTAACGC 58.986 38.462 0.00 0.00 0.00 4.84
2260 2300 7.360607 CCCCAACTGTCATAAACTTACTTAACG 60.361 40.741 0.00 0.00 0.00 3.18
2261 2301 7.574404 GCCCCAACTGTCATAAACTTACTTAAC 60.574 40.741 0.00 0.00 0.00 2.01
2262 2302 6.431852 GCCCCAACTGTCATAAACTTACTTAA 59.568 38.462 0.00 0.00 0.00 1.85
2263 2303 5.941647 GCCCCAACTGTCATAAACTTACTTA 59.058 40.000 0.00 0.00 0.00 2.24
2264 2304 4.765339 GCCCCAACTGTCATAAACTTACTT 59.235 41.667 0.00 0.00 0.00 2.24
2265 2305 4.332828 GCCCCAACTGTCATAAACTTACT 58.667 43.478 0.00 0.00 0.00 2.24
2266 2306 3.442625 GGCCCCAACTGTCATAAACTTAC 59.557 47.826 0.00 0.00 0.00 2.34
2267 2307 3.692690 GGCCCCAACTGTCATAAACTTA 58.307 45.455 0.00 0.00 0.00 2.24
2268 2308 2.525368 GGCCCCAACTGTCATAAACTT 58.475 47.619 0.00 0.00 0.00 2.66
2269 2309 2.215942 GGCCCCAACTGTCATAAACT 57.784 50.000 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.