Multiple sequence alignment - TraesCS2D01G257500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G257500 chr2D 100.000 5533 0 0 1 5533 313462083 313467615 0.000000e+00 10218.0
1 TraesCS2D01G257500 chr2D 85.244 698 41 29 3576 4218 464802625 464801935 0.000000e+00 662.0
2 TraesCS2D01G257500 chr2D 86.591 440 52 6 5100 5533 460580800 460580362 3.880000e-131 479.0
3 TraesCS2D01G257500 chr2D 80.556 108 18 3 4213 4319 47713313 47713208 4.590000e-11 80.5
4 TraesCS2D01G257500 chr2B 91.033 4639 202 72 309 4790 381233651 381238232 0.000000e+00 6065.0
5 TraesCS2D01G257500 chr2B 78.891 1028 113 56 744 1728 632520095 632519129 7.930000e-168 601.0
6 TraesCS2D01G257500 chr2B 86.788 439 52 5 5100 5533 310899089 310898652 8.330000e-133 484.0
7 TraesCS2D01G257500 chr2B 88.519 270 17 5 1 257 381233361 381233629 1.160000e-81 315.0
8 TraesCS2D01G257500 chr2B 90.722 194 17 1 4775 4968 381238437 381238629 1.980000e-64 257.0
9 TraesCS2D01G257500 chr2A 89.633 3974 161 108 327 4125 423755652 423751755 0.000000e+00 4824.0
10 TraesCS2D01G257500 chr2A 93.672 964 44 6 4122 5069 423751618 423750656 0.000000e+00 1426.0
11 TraesCS2D01G257500 chr2A 88.153 287 10 4 1 278 423755924 423755653 2.490000e-83 320.0
12 TraesCS2D01G257500 chr7A 79.541 1002 106 54 768 1728 634976369 634977312 1.690000e-174 623.0
13 TraesCS2D01G257500 chr7A 83.648 159 21 2 2007 2165 634977487 634977640 1.610000e-30 145.0
14 TraesCS2D01G257500 chr1A 79.018 1039 115 53 736 1728 572883779 572882798 2.830000e-172 616.0
15 TraesCS2D01G257500 chr1A 84.906 159 19 2 2007 2165 572882623 572882470 7.420000e-34 156.0
16 TraesCS2D01G257500 chr5B 86.560 439 53 5 5100 5533 451531381 451531818 3.880000e-131 479.0
17 TraesCS2D01G257500 chr5B 85.649 439 57 5 5100 5533 642594710 642595147 1.820000e-124 457.0
18 TraesCS2D01G257500 chr1D 86.364 440 54 5 5098 5532 142664221 142663783 5.020000e-130 475.0
19 TraesCS2D01G257500 chr5D 85.845 438 54 7 5102 5533 378151963 378151528 5.050000e-125 459.0
20 TraesCS2D01G257500 chr6B 85.682 440 56 7 5100 5533 32825225 32824787 1.820000e-124 457.0
21 TraesCS2D01G257500 chr1B 85.682 440 55 7 5100 5533 57110328 57110765 1.820000e-124 457.0
22 TraesCS2D01G257500 chr3B 85.520 442 56 7 5098 5532 606567813 606567373 6.530000e-124 455.0
23 TraesCS2D01G257500 chr3B 100.000 34 0 0 4835 4868 812530433 812530400 4.630000e-06 63.9
24 TraesCS2D01G257500 chr7D 85.065 154 18 2 2006 2159 70226610 70226758 9.600000e-33 152.0
25 TraesCS2D01G257500 chr7D 91.026 78 7 0 1874 1951 70226532 70226609 7.580000e-19 106.0
26 TraesCS2D01G257500 chr7D 97.222 36 1 0 4833 4868 210085097 210085062 1.660000e-05 62.1
27 TraesCS2D01G257500 chr4B 75.862 232 38 10 4180 4408 495053503 495053719 9.810000e-18 102.0
28 TraesCS2D01G257500 chr4A 75.000 232 46 9 4180 4408 58536871 58537093 4.560000e-16 97.1
29 TraesCS2D01G257500 chr6D 100.000 34 0 0 3021 3054 426525680 426525647 4.630000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G257500 chr2D 313462083 313467615 5532 False 10218.000000 10218 100.000000 1 5533 1 chr2D.!!$F1 5532
1 TraesCS2D01G257500 chr2D 464801935 464802625 690 True 662.000000 662 85.244000 3576 4218 1 chr2D.!!$R3 642
2 TraesCS2D01G257500 chr2B 381233361 381238629 5268 False 2212.333333 6065 90.091333 1 4968 3 chr2B.!!$F1 4967
3 TraesCS2D01G257500 chr2B 632519129 632520095 966 True 601.000000 601 78.891000 744 1728 1 chr2B.!!$R2 984
4 TraesCS2D01G257500 chr2A 423750656 423755924 5268 True 2190.000000 4824 90.486000 1 5069 3 chr2A.!!$R1 5068
5 TraesCS2D01G257500 chr7A 634976369 634977640 1271 False 384.000000 623 81.594500 768 2165 2 chr7A.!!$F1 1397
6 TraesCS2D01G257500 chr1A 572882470 572883779 1309 True 386.000000 616 81.962000 736 2165 2 chr1A.!!$R1 1429

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
738 783 0.324645 ATCATTGGGTTGGGTGCTCC 60.325 55.0 0.00 0.00 0.00 4.70 F
900 966 0.449388 CGTTGCATTTCTCTCCCTGC 59.551 55.0 0.00 0.00 35.21 4.85 F
1402 1530 0.875059 GAGCGAAACCAACAAGGGAG 59.125 55.0 0.00 0.00 43.89 4.30 F
2837 2981 0.601576 TGATCAACCCGTTCCACGTG 60.602 55.0 9.08 9.08 40.58 4.49 F
2888 3032 1.065410 ACACCATGGTTGAGGTCCCA 61.065 55.0 16.84 0.00 35.52 4.37 F
4040 4303 0.966875 AATGCACCGCACCATGACAT 60.967 50.0 0.00 0.00 43.04 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2633 2777 1.267574 TGCACCTCACCATCTCCTCC 61.268 60.000 0.00 0.00 0.00 4.30 R
2753 2897 1.002502 GTCCCCAAGGTACTGTGGC 60.003 63.158 9.21 0.00 40.86 5.01 R
3354 3537 0.315251 GAAGAAGGGCGCTTGCTTTT 59.685 50.000 22.05 9.48 39.13 2.27 R
3701 3897 0.536006 AAAGTCCTCAGCCACTGCAC 60.536 55.000 0.00 0.00 41.13 4.57 R
4528 4951 0.617413 CCCTGGAAGCTGTGATCAGT 59.383 55.000 0.00 0.00 43.05 3.41 R
5379 6028 0.034896 ACTGCCTCACTGTAAACCCG 59.965 55.000 0.00 0.00 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.139323 AGGATGTGCTGCATTGATGT 57.861 45.000 5.27 0.00 38.06 3.06
112 113 1.128321 GCAAGAAAAGCGAGAGAGCAG 59.872 52.381 0.00 0.00 40.15 4.24
210 221 3.872511 ATCTCTCAGCTTCACAGTCAG 57.127 47.619 0.00 0.00 0.00 3.51
264 278 7.445402 CCATGGTCAGGGTAGACATAAAAATAG 59.555 40.741 2.57 0.00 40.29 1.73
293 307 8.939201 TGAATGAAAAATTGAAAACTAGCACA 57.061 26.923 0.00 0.00 0.00 4.57
294 308 8.816144 TGAATGAAAAATTGAAAACTAGCACAC 58.184 29.630 0.00 0.00 0.00 3.82
295 309 8.715191 AATGAAAAATTGAAAACTAGCACACA 57.285 26.923 0.00 0.00 0.00 3.72
296 310 8.715191 ATGAAAAATTGAAAACTAGCACACAA 57.285 26.923 0.00 0.00 0.00 3.33
297 311 8.539770 TGAAAAATTGAAAACTAGCACACAAA 57.460 26.923 0.00 0.00 0.00 2.83
298 312 9.160496 TGAAAAATTGAAAACTAGCACACAAAT 57.840 25.926 0.00 0.00 0.00 2.32
302 316 8.587952 AATTGAAAACTAGCACACAAATAACC 57.412 30.769 0.00 0.00 0.00 2.85
303 317 5.753744 TGAAAACTAGCACACAAATAACCG 58.246 37.500 0.00 0.00 0.00 4.44
304 318 5.527951 TGAAAACTAGCACACAAATAACCGA 59.472 36.000 0.00 0.00 0.00 4.69
305 319 5.607119 AAACTAGCACACAAATAACCGAG 57.393 39.130 0.00 0.00 0.00 4.63
306 320 4.267349 ACTAGCACACAAATAACCGAGT 57.733 40.909 0.00 0.00 0.00 4.18
307 321 5.395682 ACTAGCACACAAATAACCGAGTA 57.604 39.130 0.00 0.00 0.00 2.59
329 343 0.390860 CCTGCTAGCCGTGAAGCTAT 59.609 55.000 13.29 0.00 44.14 2.97
352 372 3.594603 TTTTTCCTCTGAGCTAGTCGG 57.405 47.619 0.00 0.00 0.00 4.79
389 415 6.044682 CAGCATAATTAAGAAAGGCAAAGGG 58.955 40.000 0.00 0.00 0.00 3.95
506 534 0.329931 TGCGTGTGGATAATTGGGGT 59.670 50.000 0.00 0.00 0.00 4.95
554 582 5.643379 TTTGCAAAATGTCCACTATCTCC 57.357 39.130 10.02 0.00 0.00 3.71
562 590 5.543507 ATGTCCACTATCTCCATCTGTTC 57.456 43.478 0.00 0.00 0.00 3.18
589 629 7.745620 AAAAGAAAATGTCCACTACCAGTAG 57.254 36.000 3.25 3.25 39.04 2.57
734 779 0.975135 TTGCATCATTGGGTTGGGTG 59.025 50.000 0.00 0.00 0.00 4.61
735 780 1.218854 GCATCATTGGGTTGGGTGC 59.781 57.895 0.00 0.00 0.00 5.01
736 781 1.259840 GCATCATTGGGTTGGGTGCT 61.260 55.000 0.00 0.00 0.00 4.40
737 782 0.819582 CATCATTGGGTTGGGTGCTC 59.180 55.000 0.00 0.00 0.00 4.26
738 783 0.324645 ATCATTGGGTTGGGTGCTCC 60.325 55.000 0.00 0.00 0.00 4.70
759 820 1.216710 CTCACTCTCCCGCTTCACC 59.783 63.158 0.00 0.00 0.00 4.02
900 966 0.449388 CGTTGCATTTCTCTCCCTGC 59.551 55.000 0.00 0.00 35.21 4.85
933 999 3.070018 AGCTTGTTCGGTTCTTGATCAG 58.930 45.455 0.00 0.00 0.00 2.90
937 1003 2.548057 TGTTCGGTTCTTGATCAGTTGC 59.452 45.455 0.00 0.00 0.00 4.17
952 1027 1.485895 AGTTGCACTGCCATGGTTTTT 59.514 42.857 14.67 0.00 0.00 1.94
953 1028 1.866601 GTTGCACTGCCATGGTTTTTC 59.133 47.619 14.67 1.09 0.00 2.29
956 1031 1.337167 GCACTGCCATGGTTTTTCTCC 60.337 52.381 14.67 0.00 0.00 3.71
960 1035 2.490903 CTGCCATGGTTTTTCTCCTGAG 59.509 50.000 14.67 0.00 0.00 3.35
963 1038 3.305608 GCCATGGTTTTTCTCCTGAGTTG 60.306 47.826 14.67 0.00 0.00 3.16
977 1052 4.880120 TCCTGAGTTGATGCTGATTTCATC 59.120 41.667 0.00 0.00 40.42 2.92
1031 1107 1.625818 GGAGGCACTGGAGAAGAAAGA 59.374 52.381 0.00 0.00 41.55 2.52
1150 1226 4.647564 TCTTCTCCTCTGCAAATTTCCT 57.352 40.909 0.00 0.00 0.00 3.36
1151 1227 4.583871 TCTTCTCCTCTGCAAATTTCCTC 58.416 43.478 0.00 0.00 0.00 3.71
1166 1242 8.306761 GCAAATTTCCTCCTTCTTTTTCTCATA 58.693 33.333 0.00 0.00 0.00 2.15
1308 1415 2.951642 TGTCCTTTTTCTTGTGCTCCAG 59.048 45.455 0.00 0.00 0.00 3.86
1358 1486 2.433868 TGTGGTGTCTTCTAGAACGC 57.566 50.000 0.00 0.00 0.00 4.84
1402 1530 0.875059 GAGCGAAACCAACAAGGGAG 59.125 55.000 0.00 0.00 43.89 4.30
1536 1667 5.765176 TGCATCTTGAAAGAATTGTCACAG 58.235 37.500 0.00 0.00 38.77 3.66
1560 1691 3.565764 TTTCATCTCCGGATGCTGAAT 57.434 42.857 18.61 0.66 46.41 2.57
1566 1697 1.031571 TCCGGATGCTGAATTGCACC 61.032 55.000 0.00 0.00 46.33 5.01
1737 1876 7.402071 TCCTCCAGGTGACACTTATAGTTTTAT 59.598 37.037 5.39 0.00 36.34 1.40
1738 1877 8.047310 CCTCCAGGTGACACTTATAGTTTTATT 58.953 37.037 5.39 0.00 0.00 1.40
1967 2108 1.135199 CACATTGCCATCCTCACTTGC 60.135 52.381 0.00 0.00 0.00 4.01
2286 2427 1.881903 TTCGCTCCTGCCACTCTCAG 61.882 60.000 0.00 0.00 35.36 3.35
2324 2465 4.205587 GAGGTGATCCATCTGAATTTGCT 58.794 43.478 0.00 0.00 35.89 3.91
2378 2521 5.470368 TGCACTTCAGACAGTAACATACTC 58.530 41.667 0.00 0.00 36.76 2.59
2520 2664 5.174037 AGCTAACTTGGCTGGTATTGTTA 57.826 39.130 0.00 0.00 38.73 2.41
2578 2722 1.078143 GAGTGGTAAGCCTGGCTGG 60.078 63.158 24.16 5.98 39.62 4.85
2633 2777 1.067974 GAAACCCCCAACAACCTTTCG 59.932 52.381 0.00 0.00 0.00 3.46
2837 2981 0.601576 TGATCAACCCGTTCCACGTG 60.602 55.000 9.08 9.08 40.58 4.49
2888 3032 1.065410 ACACCATGGTTGAGGTCCCA 61.065 55.000 16.84 0.00 35.52 4.37
2947 3091 5.179368 TCGAAGATTTGCTCCAAACTTACAG 59.821 40.000 0.00 0.00 36.13 2.74
3076 3254 6.416750 GGTTTGACGTTTTCAGGTTAATTCTG 59.583 38.462 0.00 3.29 34.94 3.02
3354 3537 2.408271 GTGGGACAGCTGAATCATCA 57.592 50.000 23.35 7.99 41.80 3.07
3411 3594 1.066573 GGATGTGACACTGACAGAGGG 60.067 57.143 10.08 0.74 0.00 4.30
3591 3787 3.400255 TGATCGAGTGGTAGTATCTCCG 58.600 50.000 0.00 0.00 0.00 4.63
3664 3860 8.243426 TGTTCCTGCAATACTTGATTAAATGTC 58.757 33.333 0.00 0.00 0.00 3.06
3671 3867 7.912250 GCAATACTTGATTAAATGTCTGGACAG 59.088 37.037 9.33 0.00 45.48 3.51
3675 3871 8.641498 ACTTGATTAAATGTCTGGACAGATTT 57.359 30.769 5.19 5.83 45.48 2.17
3685 3881 9.696917 AATGTCTGGACAGATTTTGATTTTTAC 57.303 29.630 5.19 0.00 45.48 2.01
3688 3884 6.019779 TGGACAGATTTTGATTTTTACCCG 57.980 37.500 0.00 0.00 0.00 5.28
3852 4048 1.663702 CCGATCCCGCGGTATGAAC 60.664 63.158 26.12 12.06 46.07 3.18
3853 4049 1.663702 CGATCCCGCGGTATGAACC 60.664 63.158 26.12 9.58 42.95 3.62
3873 4077 1.754226 CAACTCCACCTCCTCTCTAGC 59.246 57.143 0.00 0.00 0.00 3.42
3874 4078 1.304891 ACTCCACCTCCTCTCTAGCT 58.695 55.000 0.00 0.00 0.00 3.32
3875 4079 2.494158 ACTCCACCTCCTCTCTAGCTA 58.506 52.381 0.00 0.00 0.00 3.32
3876 4080 2.441750 ACTCCACCTCCTCTCTAGCTAG 59.558 54.545 15.01 15.01 0.00 3.42
3898 4131 5.385198 AGTAAAAGATGCTCCCAAAAGACA 58.615 37.500 0.00 0.00 0.00 3.41
3899 4132 4.590850 AAAAGATGCTCCCAAAAGACAC 57.409 40.909 0.00 0.00 0.00 3.67
3905 4138 1.748493 GCTCCCAAAAGACACAACACA 59.252 47.619 0.00 0.00 0.00 3.72
3941 4174 8.183104 AGACATACATACATACATACACTGCT 57.817 34.615 0.00 0.00 0.00 4.24
3964 4198 6.467723 TGCGAGACTTCTTTTGACTAATTC 57.532 37.500 0.00 0.00 0.00 2.17
3970 4204 8.023050 AGACTTCTTTTGACTAATTCGATGTG 57.977 34.615 0.00 0.00 0.00 3.21
3984 4218 4.271696 TCGATGTGGAAGAAACATGAGT 57.728 40.909 0.00 0.00 38.37 3.41
4003 4261 7.285401 ACATGAGTAGAGTGGAACAAATGTTTT 59.715 33.333 0.00 0.00 44.16 2.43
4005 4263 6.018262 TGAGTAGAGTGGAACAAATGTTTTCG 60.018 38.462 0.00 0.00 44.16 3.46
4040 4303 0.966875 AATGCACCGCACCATGACAT 60.967 50.000 0.00 0.00 43.04 3.06
4091 4354 4.021104 CCCCTTTTTCTTTCTCCATGGAAC 60.021 45.833 17.00 0.00 0.00 3.62
4284 4701 4.457496 CGCCGGACCATCAGCACT 62.457 66.667 5.05 0.00 0.00 4.40
4319 4736 4.404691 CTTCCCAAGCTGGTGGAC 57.595 61.111 5.98 0.00 41.65 4.02
4454 4877 3.332493 GACGACGGCGAGTAAGGCA 62.332 63.158 22.49 0.00 41.64 4.75
4863 5512 2.379005 GCCCAGGATTTAAAGAGGGTG 58.621 52.381 14.71 0.88 38.56 4.61
4920 5569 3.336676 AGCCTAAAGCCTATAATGGGGT 58.663 45.455 0.00 0.00 45.47 4.95
4989 5638 8.549777 TCATTGTCACGTTGTTACAAATTTAC 57.450 30.769 0.00 0.00 34.15 2.01
4990 5639 8.182227 TCATTGTCACGTTGTTACAAATTTACA 58.818 29.630 0.00 0.25 34.15 2.41
4993 5642 7.749808 TGTCACGTTGTTACAAATTTACAGAA 58.250 30.769 0.00 0.00 0.00 3.02
5037 5686 6.951530 CGCATCACAAATCATGAACATTTTTC 59.048 34.615 0.00 0.00 0.00 2.29
5039 5688 8.166706 GCATCACAAATCATGAACATTTTTCTC 58.833 33.333 0.00 0.00 0.00 2.87
5040 5689 9.419297 CATCACAAATCATGAACATTTTTCTCT 57.581 29.630 0.00 0.00 0.00 3.10
5041 5690 9.991906 ATCACAAATCATGAACATTTTTCTCTT 57.008 25.926 0.00 0.00 0.00 2.85
5042 5691 9.820725 TCACAAATCATGAACATTTTTCTCTTT 57.179 25.926 0.00 0.00 0.00 2.52
5069 5718 5.518865 ACACCTCCCATGCATTAATTAAGT 58.481 37.500 0.00 0.00 0.00 2.24
5070 5719 6.668645 ACACCTCCCATGCATTAATTAAGTA 58.331 36.000 0.00 0.00 0.00 2.24
5071 5720 7.122715 ACACCTCCCATGCATTAATTAAGTAA 58.877 34.615 0.00 0.00 0.00 2.24
5072 5721 7.617723 ACACCTCCCATGCATTAATTAAGTAAA 59.382 33.333 0.00 0.00 0.00 2.01
5073 5722 8.474025 CACCTCCCATGCATTAATTAAGTAAAA 58.526 33.333 0.00 0.00 0.00 1.52
5074 5723 9.212593 ACCTCCCATGCATTAATTAAGTAAAAT 57.787 29.630 0.00 0.00 0.00 1.82
5075 5724 9.480053 CCTCCCATGCATTAATTAAGTAAAATG 57.520 33.333 0.00 4.87 33.45 2.32
5161 5810 7.696992 AATTGTTACATCGTCCATAAAAGGT 57.303 32.000 0.00 0.00 0.00 3.50
5162 5811 8.795842 AATTGTTACATCGTCCATAAAAGGTA 57.204 30.769 0.00 0.00 0.00 3.08
5163 5812 7.599630 TTGTTACATCGTCCATAAAAGGTAC 57.400 36.000 0.00 0.00 0.00 3.34
5164 5813 6.699366 TGTTACATCGTCCATAAAAGGTACA 58.301 36.000 0.00 0.00 0.00 2.90
5165 5814 7.160049 TGTTACATCGTCCATAAAAGGTACAA 58.840 34.615 0.00 0.00 0.00 2.41
5166 5815 7.825270 TGTTACATCGTCCATAAAAGGTACAAT 59.175 33.333 0.00 0.00 0.00 2.71
5167 5816 9.316730 GTTACATCGTCCATAAAAGGTACAATA 57.683 33.333 0.00 0.00 0.00 1.90
5169 5818 8.603242 ACATCGTCCATAAAAGGTACAATATC 57.397 34.615 0.00 0.00 0.00 1.63
5170 5819 8.208224 ACATCGTCCATAAAAGGTACAATATCA 58.792 33.333 0.00 0.00 0.00 2.15
5171 5820 9.219603 CATCGTCCATAAAAGGTACAATATCAT 57.780 33.333 0.00 0.00 0.00 2.45
5172 5821 9.793259 ATCGTCCATAAAAGGTACAATATCATT 57.207 29.630 0.00 0.00 0.00 2.57
5173 5822 9.268268 TCGTCCATAAAAGGTACAATATCATTC 57.732 33.333 0.00 0.00 0.00 2.67
5174 5823 9.051679 CGTCCATAAAAGGTACAATATCATTCA 57.948 33.333 0.00 0.00 0.00 2.57
5181 5830 8.854614 AAAGGTACAATATCATTCATAGGCTC 57.145 34.615 0.00 0.00 0.00 4.70
5182 5831 6.951971 AGGTACAATATCATTCATAGGCTCC 58.048 40.000 0.00 0.00 0.00 4.70
5183 5832 6.732862 AGGTACAATATCATTCATAGGCTCCT 59.267 38.462 0.00 0.00 0.00 3.69
5184 5833 7.044798 GGTACAATATCATTCATAGGCTCCTC 58.955 42.308 0.00 0.00 0.00 3.71
5185 5834 5.728471 ACAATATCATTCATAGGCTCCTCG 58.272 41.667 0.00 0.00 0.00 4.63
5186 5835 5.481824 ACAATATCATTCATAGGCTCCTCGA 59.518 40.000 0.00 0.00 0.00 4.04
5187 5836 6.014242 ACAATATCATTCATAGGCTCCTCGAA 60.014 38.462 0.00 0.00 0.00 3.71
5188 5837 3.735237 TCATTCATAGGCTCCTCGAAC 57.265 47.619 0.00 0.00 0.00 3.95
5189 5838 2.365617 TCATTCATAGGCTCCTCGAACC 59.634 50.000 0.00 0.00 0.00 3.62
5190 5839 1.860641 TTCATAGGCTCCTCGAACCA 58.139 50.000 0.00 0.00 0.00 3.67
5191 5840 1.860641 TCATAGGCTCCTCGAACCAA 58.139 50.000 0.00 0.00 0.00 3.67
5192 5841 2.398588 TCATAGGCTCCTCGAACCAAT 58.601 47.619 0.00 0.00 0.00 3.16
5193 5842 2.365617 TCATAGGCTCCTCGAACCAATC 59.634 50.000 0.00 0.00 0.00 2.67
5194 5843 1.120530 TAGGCTCCTCGAACCAATCC 58.879 55.000 0.00 0.00 0.00 3.01
5195 5844 1.153147 GGCTCCTCGAACCAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
5196 5845 1.627297 GGCTCCTCGAACCAATCCCT 61.627 60.000 0.00 0.00 0.00 4.20
5197 5846 1.120530 GCTCCTCGAACCAATCCCTA 58.879 55.000 0.00 0.00 0.00 3.53
5198 5847 1.069358 GCTCCTCGAACCAATCCCTAG 59.931 57.143 0.00 0.00 0.00 3.02
5199 5848 2.389715 CTCCTCGAACCAATCCCTAGT 58.610 52.381 0.00 0.00 0.00 2.57
5200 5849 2.101582 CTCCTCGAACCAATCCCTAGTG 59.898 54.545 0.00 0.00 0.00 2.74
5201 5850 1.139058 CCTCGAACCAATCCCTAGTGG 59.861 57.143 0.00 0.00 46.52 4.00
5202 5851 0.539986 TCGAACCAATCCCTAGTGGC 59.460 55.000 0.00 0.00 44.95 5.01
5203 5852 0.541863 CGAACCAATCCCTAGTGGCT 59.458 55.000 0.00 0.00 44.95 4.75
5204 5853 1.743772 CGAACCAATCCCTAGTGGCTG 60.744 57.143 0.00 0.00 44.95 4.85
5205 5854 1.559682 GAACCAATCCCTAGTGGCTGA 59.440 52.381 0.00 0.00 44.95 4.26
5206 5855 1.668826 ACCAATCCCTAGTGGCTGAA 58.331 50.000 0.00 0.00 44.95 3.02
5207 5856 1.992557 ACCAATCCCTAGTGGCTGAAA 59.007 47.619 0.00 0.00 44.95 2.69
5208 5857 2.378547 ACCAATCCCTAGTGGCTGAAAA 59.621 45.455 0.00 0.00 44.95 2.29
5209 5858 3.011708 ACCAATCCCTAGTGGCTGAAAAT 59.988 43.478 0.00 0.00 44.95 1.82
5210 5859 4.026052 CCAATCCCTAGTGGCTGAAAATT 58.974 43.478 0.00 0.00 33.38 1.82
5211 5860 4.467438 CCAATCCCTAGTGGCTGAAAATTT 59.533 41.667 0.00 0.00 33.38 1.82
5212 5861 5.394553 CCAATCCCTAGTGGCTGAAAATTTC 60.395 44.000 0.00 0.00 33.38 2.17
5213 5862 3.343617 TCCCTAGTGGCTGAAAATTTCG 58.656 45.455 0.97 0.00 0.00 3.46
5214 5863 2.159379 CCCTAGTGGCTGAAAATTTCGC 60.159 50.000 11.90 11.90 0.00 4.70
5215 5864 2.476185 CCTAGTGGCTGAAAATTTCGCG 60.476 50.000 0.00 0.00 32.59 5.87
5216 5865 1.234821 AGTGGCTGAAAATTTCGCGA 58.765 45.000 3.71 3.71 32.59 5.87
5217 5866 1.606668 AGTGGCTGAAAATTTCGCGAA 59.393 42.857 19.38 19.38 32.59 4.70
5218 5867 1.713932 GTGGCTGAAAATTTCGCGAAC 59.286 47.619 23.33 10.39 32.59 3.95
5219 5868 1.335506 TGGCTGAAAATTTCGCGAACC 60.336 47.619 23.33 16.89 32.59 3.62
5220 5869 1.068541 GGCTGAAAATTTCGCGAACCT 60.069 47.619 23.33 9.33 32.59 3.50
5221 5870 2.160813 GGCTGAAAATTTCGCGAACCTA 59.839 45.455 23.33 7.75 32.59 3.08
5222 5871 3.417185 GCTGAAAATTTCGCGAACCTAG 58.583 45.455 23.33 14.38 0.00 3.02
5223 5872 3.417185 CTGAAAATTTCGCGAACCTAGC 58.583 45.455 23.33 11.80 0.00 3.42
5224 5873 3.071479 TGAAAATTTCGCGAACCTAGCT 58.929 40.909 23.33 3.95 0.00 3.32
5225 5874 4.247258 TGAAAATTTCGCGAACCTAGCTA 58.753 39.130 23.33 5.15 0.00 3.32
5226 5875 4.873827 TGAAAATTTCGCGAACCTAGCTAT 59.126 37.500 23.33 7.64 0.00 2.97
5227 5876 5.353123 TGAAAATTTCGCGAACCTAGCTATT 59.647 36.000 23.33 13.69 0.00 1.73
5228 5877 5.813080 AAATTTCGCGAACCTAGCTATTT 57.187 34.783 23.33 18.70 0.00 1.40
5229 5878 5.405331 AATTTCGCGAACCTAGCTATTTC 57.595 39.130 23.33 0.00 0.00 2.17
5230 5879 3.513680 TTCGCGAACCTAGCTATTTCA 57.486 42.857 19.38 0.00 0.00 2.69
5231 5880 3.728076 TCGCGAACCTAGCTATTTCAT 57.272 42.857 6.20 0.00 0.00 2.57
5232 5881 3.381045 TCGCGAACCTAGCTATTTCATG 58.619 45.455 6.20 0.00 0.00 3.07
5233 5882 2.476619 CGCGAACCTAGCTATTTCATGG 59.523 50.000 0.00 4.88 0.00 3.66
5234 5883 2.808543 GCGAACCTAGCTATTTCATGGG 59.191 50.000 13.12 4.27 0.00 4.00
5235 5884 3.744530 GCGAACCTAGCTATTTCATGGGT 60.745 47.826 13.12 4.82 0.00 4.51
5236 5885 4.451900 CGAACCTAGCTATTTCATGGGTT 58.548 43.478 10.23 10.23 38.14 4.11
5237 5886 5.607477 CGAACCTAGCTATTTCATGGGTTA 58.393 41.667 10.37 0.00 35.99 2.85
5238 5887 5.465724 CGAACCTAGCTATTTCATGGGTTAC 59.534 44.000 10.37 5.33 35.99 2.50
5239 5888 5.306114 ACCTAGCTATTTCATGGGTTACC 57.694 43.478 0.00 0.00 37.24 2.85
5240 5889 4.975794 ACCTAGCTATTTCATGGGTTACCT 59.024 41.667 0.00 0.00 37.76 3.08
5241 5890 5.432060 ACCTAGCTATTTCATGGGTTACCTT 59.568 40.000 0.00 0.00 37.76 3.50
5242 5891 6.618196 ACCTAGCTATTTCATGGGTTACCTTA 59.382 38.462 0.00 0.00 37.76 2.69
5243 5892 7.294958 ACCTAGCTATTTCATGGGTTACCTTAT 59.705 37.037 0.00 0.00 37.76 1.73
5244 5893 8.164070 CCTAGCTATTTCATGGGTTACCTTATT 58.836 37.037 0.00 0.00 37.76 1.40
5245 5894 9.574516 CTAGCTATTTCATGGGTTACCTTATTT 57.425 33.333 0.00 0.00 37.76 1.40
5246 5895 8.237811 AGCTATTTCATGGGTTACCTTATTTG 57.762 34.615 0.00 0.00 37.76 2.32
5247 5896 6.923508 GCTATTTCATGGGTTACCTTATTTGC 59.076 38.462 0.00 0.00 37.76 3.68
5248 5897 7.201911 GCTATTTCATGGGTTACCTTATTTGCT 60.202 37.037 0.00 0.00 37.76 3.91
5249 5898 6.926630 TTTCATGGGTTACCTTATTTGCTT 57.073 33.333 0.00 0.00 37.76 3.91
5250 5899 8.602472 ATTTCATGGGTTACCTTATTTGCTTA 57.398 30.769 0.00 0.00 37.76 3.09
5251 5900 7.399245 TTCATGGGTTACCTTATTTGCTTAC 57.601 36.000 0.00 0.00 37.76 2.34
5252 5901 6.486056 TCATGGGTTACCTTATTTGCTTACA 58.514 36.000 0.00 0.00 37.76 2.41
5253 5902 7.122715 TCATGGGTTACCTTATTTGCTTACAT 58.877 34.615 0.00 0.00 37.76 2.29
5254 5903 6.767524 TGGGTTACCTTATTTGCTTACATG 57.232 37.500 0.00 0.00 37.76 3.21
5255 5904 6.249951 TGGGTTACCTTATTTGCTTACATGT 58.750 36.000 2.69 2.69 37.76 3.21
5256 5905 6.722129 TGGGTTACCTTATTTGCTTACATGTT 59.278 34.615 2.30 0.00 37.76 2.71
5257 5906 7.889073 TGGGTTACCTTATTTGCTTACATGTTA 59.111 33.333 2.30 0.00 37.76 2.41
5258 5907 8.186163 GGGTTACCTTATTTGCTTACATGTTAC 58.814 37.037 2.30 0.00 0.00 2.50
5259 5908 8.732531 GGTTACCTTATTTGCTTACATGTTACA 58.267 33.333 2.30 0.00 0.00 2.41
5263 5912 9.019656 ACCTTATTTGCTTACATGTTACAATGA 57.980 29.630 2.30 0.00 0.00 2.57
5268 5917 9.926158 ATTTGCTTACATGTTACAATGATCAAA 57.074 25.926 2.30 3.21 0.00 2.69
5269 5918 9.926158 TTTGCTTACATGTTACAATGATCAAAT 57.074 25.926 2.30 0.00 0.00 2.32
5270 5919 9.571810 TTGCTTACATGTTACAATGATCAAATC 57.428 29.630 2.30 0.00 0.00 2.17
5271 5920 8.959548 TGCTTACATGTTACAATGATCAAATCT 58.040 29.630 2.30 0.00 0.00 2.40
5303 5952 8.196802 AGAAAAATCACAAGCCAAAAAGTAAC 57.803 30.769 0.00 0.00 0.00 2.50
5304 5953 7.821846 AGAAAAATCACAAGCCAAAAAGTAACA 59.178 29.630 0.00 0.00 0.00 2.41
5305 5954 7.538303 AAAATCACAAGCCAAAAAGTAACAG 57.462 32.000 0.00 0.00 0.00 3.16
5306 5955 5.852282 ATCACAAGCCAAAAAGTAACAGT 57.148 34.783 0.00 0.00 0.00 3.55
5307 5956 5.652994 TCACAAGCCAAAAAGTAACAGTT 57.347 34.783 0.00 0.00 0.00 3.16
5308 5957 6.761099 TCACAAGCCAAAAAGTAACAGTTA 57.239 33.333 0.00 0.00 0.00 2.24
5309 5958 7.341445 TCACAAGCCAAAAAGTAACAGTTAT 57.659 32.000 0.00 0.00 0.00 1.89
5310 5959 7.422399 TCACAAGCCAAAAAGTAACAGTTATC 58.578 34.615 0.00 0.00 0.00 1.75
5311 5960 7.067615 TCACAAGCCAAAAAGTAACAGTTATCA 59.932 33.333 0.00 0.00 0.00 2.15
5312 5961 7.704472 CACAAGCCAAAAAGTAACAGTTATCAA 59.296 33.333 0.00 0.00 0.00 2.57
5313 5962 8.254508 ACAAGCCAAAAAGTAACAGTTATCAAA 58.745 29.630 0.00 0.00 0.00 2.69
5314 5963 9.092876 CAAGCCAAAAAGTAACAGTTATCAAAA 57.907 29.630 0.00 0.00 0.00 2.44
5315 5964 8.871686 AGCCAAAAAGTAACAGTTATCAAAAG 57.128 30.769 0.00 0.00 0.00 2.27
5316 5965 7.438160 AGCCAAAAAGTAACAGTTATCAAAAGC 59.562 33.333 0.00 0.00 0.00 3.51
5317 5966 7.438160 GCCAAAAAGTAACAGTTATCAAAAGCT 59.562 33.333 0.00 0.00 0.00 3.74
5318 5967 8.755018 CCAAAAAGTAACAGTTATCAAAAGCTG 58.245 33.333 0.00 0.00 35.31 4.24
5319 5968 7.930513 AAAAGTAACAGTTATCAAAAGCTGC 57.069 32.000 0.00 0.00 32.65 5.25
5320 5969 6.633500 AAGTAACAGTTATCAAAAGCTGCA 57.367 33.333 1.02 0.00 32.65 4.41
5321 5970 6.246420 AGTAACAGTTATCAAAAGCTGCAG 57.754 37.500 10.11 10.11 32.65 4.41
5322 5971 3.565905 ACAGTTATCAAAAGCTGCAGC 57.434 42.857 31.53 31.53 42.49 5.25
5344 5993 4.500116 GCTCCCGCGAGTGTCCTC 62.500 72.222 8.23 0.00 38.49 3.71
5345 5994 2.752238 CTCCCGCGAGTGTCCTCT 60.752 66.667 8.23 0.00 35.43 3.69
5346 5995 3.057547 CTCCCGCGAGTGTCCTCTG 62.058 68.421 8.23 0.00 35.43 3.35
5347 5996 4.135153 CCCGCGAGTGTCCTCTGG 62.135 72.222 8.23 0.00 35.43 3.86
5348 5997 3.374402 CCGCGAGTGTCCTCTGGT 61.374 66.667 8.23 0.00 35.43 4.00
5349 5998 2.179517 CGCGAGTGTCCTCTGGTC 59.820 66.667 0.00 0.00 35.43 4.02
5350 5999 2.336478 CGCGAGTGTCCTCTGGTCT 61.336 63.158 0.00 0.00 35.43 3.85
5351 6000 1.867919 CGCGAGTGTCCTCTGGTCTT 61.868 60.000 0.00 0.00 35.43 3.01
5352 6001 0.318762 GCGAGTGTCCTCTGGTCTTT 59.681 55.000 0.00 0.00 35.43 2.52
5353 6002 1.544691 GCGAGTGTCCTCTGGTCTTTA 59.455 52.381 0.00 0.00 35.43 1.85
5354 6003 2.166664 GCGAGTGTCCTCTGGTCTTTAT 59.833 50.000 0.00 0.00 35.43 1.40
5355 6004 3.368531 GCGAGTGTCCTCTGGTCTTTATT 60.369 47.826 0.00 0.00 35.43 1.40
5356 6005 4.177026 CGAGTGTCCTCTGGTCTTTATTG 58.823 47.826 0.00 0.00 35.43 1.90
5357 6006 4.322049 CGAGTGTCCTCTGGTCTTTATTGT 60.322 45.833 0.00 0.00 35.43 2.71
5358 6007 4.899502 AGTGTCCTCTGGTCTTTATTGTG 58.100 43.478 0.00 0.00 0.00 3.33
5359 6008 4.348168 AGTGTCCTCTGGTCTTTATTGTGT 59.652 41.667 0.00 0.00 0.00 3.72
5360 6009 4.691216 GTGTCCTCTGGTCTTTATTGTGTC 59.309 45.833 0.00 0.00 0.00 3.67
5361 6010 4.346709 TGTCCTCTGGTCTTTATTGTGTCA 59.653 41.667 0.00 0.00 0.00 3.58
5362 6011 5.163248 TGTCCTCTGGTCTTTATTGTGTCAA 60.163 40.000 0.00 0.00 0.00 3.18
5363 6012 5.940470 GTCCTCTGGTCTTTATTGTGTCAAT 59.060 40.000 0.80 0.80 0.00 2.57
5364 6013 6.092807 GTCCTCTGGTCTTTATTGTGTCAATC 59.907 42.308 0.00 0.00 0.00 2.67
5365 6014 5.939883 CCTCTGGTCTTTATTGTGTCAATCA 59.060 40.000 0.00 0.00 0.00 2.57
5366 6015 6.128172 CCTCTGGTCTTTATTGTGTCAATCAC 60.128 42.308 0.00 0.00 46.31 3.06
5367 6016 6.533730 TCTGGTCTTTATTGTGTCAATCACT 58.466 36.000 0.00 0.00 46.27 3.41
5368 6017 6.998074 TCTGGTCTTTATTGTGTCAATCACTT 59.002 34.615 0.00 0.00 46.27 3.16
5369 6018 7.502226 TCTGGTCTTTATTGTGTCAATCACTTT 59.498 33.333 0.00 0.00 46.27 2.66
5370 6019 7.648142 TGGTCTTTATTGTGTCAATCACTTTC 58.352 34.615 0.00 0.00 46.27 2.62
5371 6020 7.284261 TGGTCTTTATTGTGTCAATCACTTTCA 59.716 33.333 0.00 0.00 46.27 2.69
5372 6021 8.299570 GGTCTTTATTGTGTCAATCACTTTCAT 58.700 33.333 0.00 0.00 46.27 2.57
5379 6028 9.630098 ATTGTGTCAATCACTTTCATATTGTTC 57.370 29.630 0.00 0.00 46.27 3.18
5380 6029 7.297391 TGTGTCAATCACTTTCATATTGTTCG 58.703 34.615 0.00 0.00 46.27 3.95
5381 6030 6.742718 GTGTCAATCACTTTCATATTGTTCGG 59.257 38.462 0.00 0.00 43.13 4.30
5382 6031 6.128035 TGTCAATCACTTTCATATTGTTCGGG 60.128 38.462 0.00 0.00 33.35 5.14
5383 6032 5.943416 TCAATCACTTTCATATTGTTCGGGT 59.057 36.000 0.00 0.00 33.35 5.28
5384 6033 6.432783 TCAATCACTTTCATATTGTTCGGGTT 59.567 34.615 0.00 0.00 33.35 4.11
5385 6034 6.834168 ATCACTTTCATATTGTTCGGGTTT 57.166 33.333 0.00 0.00 0.00 3.27
5386 6035 7.931578 ATCACTTTCATATTGTTCGGGTTTA 57.068 32.000 0.00 0.00 0.00 2.01
5387 6036 7.136289 TCACTTTCATATTGTTCGGGTTTAC 57.864 36.000 0.00 0.00 0.00 2.01
5388 6037 6.711194 TCACTTTCATATTGTTCGGGTTTACA 59.289 34.615 0.00 0.00 0.00 2.41
5389 6038 7.021196 CACTTTCATATTGTTCGGGTTTACAG 58.979 38.462 0.00 0.00 0.00 2.74
5390 6039 6.713450 ACTTTCATATTGTTCGGGTTTACAGT 59.287 34.615 0.00 0.00 0.00 3.55
5391 6040 6.489127 TTCATATTGTTCGGGTTTACAGTG 57.511 37.500 0.00 0.00 0.00 3.66
5392 6041 5.795972 TCATATTGTTCGGGTTTACAGTGA 58.204 37.500 0.00 0.00 0.00 3.41
5393 6042 5.872617 TCATATTGTTCGGGTTTACAGTGAG 59.127 40.000 0.00 0.00 0.00 3.51
5394 6043 2.536761 TGTTCGGGTTTACAGTGAGG 57.463 50.000 0.00 0.00 0.00 3.86
5395 6044 1.154197 GTTCGGGTTTACAGTGAGGC 58.846 55.000 0.00 0.00 0.00 4.70
5396 6045 0.759959 TTCGGGTTTACAGTGAGGCA 59.240 50.000 0.00 0.00 0.00 4.75
5397 6046 0.320374 TCGGGTTTACAGTGAGGCAG 59.680 55.000 0.00 0.00 0.00 4.85
5398 6047 0.034896 CGGGTTTACAGTGAGGCAGT 59.965 55.000 0.00 0.00 0.00 4.40
5399 6048 1.542547 CGGGTTTACAGTGAGGCAGTT 60.543 52.381 0.00 0.00 0.00 3.16
5400 6049 1.880027 GGGTTTACAGTGAGGCAGTTG 59.120 52.381 0.00 0.00 0.00 3.16
5401 6050 1.266989 GGTTTACAGTGAGGCAGTTGC 59.733 52.381 0.00 0.00 41.14 4.17
5402 6051 1.946768 GTTTACAGTGAGGCAGTTGCA 59.053 47.619 6.43 0.00 44.36 4.08
5403 6052 1.882912 TTACAGTGAGGCAGTTGCAG 58.117 50.000 6.43 0.00 44.36 4.41
5404 6053 0.603707 TACAGTGAGGCAGTTGCAGC 60.604 55.000 6.43 0.00 44.36 5.25
5412 6061 3.741476 CAGTTGCAGCCCGCCTTC 61.741 66.667 0.00 0.00 41.33 3.46
5413 6062 3.958860 AGTTGCAGCCCGCCTTCT 61.959 61.111 0.00 0.00 41.33 2.85
5414 6063 3.741476 GTTGCAGCCCGCCTTCTG 61.741 66.667 0.00 0.00 41.33 3.02
5415 6064 4.269523 TTGCAGCCCGCCTTCTGT 62.270 61.111 0.00 0.00 41.33 3.41
5419 6068 4.269523 AGCCCGCCTTCTGTGCAA 62.270 61.111 0.00 0.00 0.00 4.08
5420 6069 3.741476 GCCCGCCTTCTGTGCAAG 61.741 66.667 0.00 0.00 0.00 4.01
5421 6070 3.058160 CCCGCCTTCTGTGCAAGG 61.058 66.667 0.00 0.00 45.35 3.61
5422 6071 2.032528 CCGCCTTCTGTGCAAGGA 59.967 61.111 6.34 0.00 45.41 3.36
5423 6072 1.600636 CCGCCTTCTGTGCAAGGAA 60.601 57.895 6.34 4.58 45.41 3.36
5424 6073 0.962356 CCGCCTTCTGTGCAAGGAAT 60.962 55.000 6.34 0.00 45.41 3.01
5425 6074 1.678728 CCGCCTTCTGTGCAAGGAATA 60.679 52.381 6.34 0.00 45.41 1.75
5426 6075 2.083774 CGCCTTCTGTGCAAGGAATAA 58.916 47.619 6.34 0.00 45.41 1.40
5427 6076 2.487762 CGCCTTCTGTGCAAGGAATAAA 59.512 45.455 6.34 0.00 45.41 1.40
5428 6077 3.670627 CGCCTTCTGTGCAAGGAATAAAC 60.671 47.826 6.34 0.00 45.41 2.01
5429 6078 3.367395 GCCTTCTGTGCAAGGAATAAACC 60.367 47.826 6.34 0.00 45.41 3.27
5430 6079 3.826157 CCTTCTGTGCAAGGAATAAACCA 59.174 43.478 0.00 0.00 45.41 3.67
5431 6080 4.280677 CCTTCTGTGCAAGGAATAAACCAA 59.719 41.667 0.00 0.00 45.41 3.67
5432 6081 5.221422 CCTTCTGTGCAAGGAATAAACCAAA 60.221 40.000 0.00 0.00 45.41 3.28
5433 6082 5.195001 TCTGTGCAAGGAATAAACCAAAC 57.805 39.130 0.00 0.00 0.00 2.93
5434 6083 4.892934 TCTGTGCAAGGAATAAACCAAACT 59.107 37.500 0.00 0.00 0.00 2.66
5435 6084 5.362430 TCTGTGCAAGGAATAAACCAAACTT 59.638 36.000 0.00 0.00 0.00 2.66
5436 6085 5.983540 TGTGCAAGGAATAAACCAAACTTT 58.016 33.333 0.00 0.00 0.00 2.66
5437 6086 7.068839 TCTGTGCAAGGAATAAACCAAACTTTA 59.931 33.333 0.00 0.00 0.00 1.85
5438 6087 7.556844 TGTGCAAGGAATAAACCAAACTTTAA 58.443 30.769 0.00 0.00 0.00 1.52
5439 6088 8.041323 TGTGCAAGGAATAAACCAAACTTTAAA 58.959 29.630 0.00 0.00 0.00 1.52
5440 6089 8.547894 GTGCAAGGAATAAACCAAACTTTAAAG 58.452 33.333 13.76 13.76 0.00 1.85
5441 6090 7.225734 TGCAAGGAATAAACCAAACTTTAAAGC 59.774 33.333 15.24 0.00 0.00 3.51
5442 6091 7.307751 GCAAGGAATAAACCAAACTTTAAAGCC 60.308 37.037 15.24 3.85 0.00 4.35
5443 6092 7.368198 AGGAATAAACCAAACTTTAAAGCCA 57.632 32.000 15.24 0.00 0.00 4.75
5444 6093 7.441836 AGGAATAAACCAAACTTTAAAGCCAG 58.558 34.615 15.24 4.94 0.00 4.85
5445 6094 7.289084 AGGAATAAACCAAACTTTAAAGCCAGA 59.711 33.333 15.24 0.00 0.00 3.86
5446 6095 8.094548 GGAATAAACCAAACTTTAAAGCCAGAT 58.905 33.333 15.24 0.00 0.00 2.90
5447 6096 9.140286 GAATAAACCAAACTTTAAAGCCAGATC 57.860 33.333 15.24 0.00 0.00 2.75
5448 6097 6.731292 AAACCAAACTTTAAAGCCAGATCT 57.269 33.333 15.24 0.00 0.00 2.75
5449 6098 6.731292 AACCAAACTTTAAAGCCAGATCTT 57.269 33.333 15.24 0.00 0.00 2.40
5450 6099 6.332735 ACCAAACTTTAAAGCCAGATCTTC 57.667 37.500 15.24 0.00 0.00 2.87
5451 6100 6.071320 ACCAAACTTTAAAGCCAGATCTTCT 58.929 36.000 15.24 0.00 0.00 2.85
5452 6101 6.015940 ACCAAACTTTAAAGCCAGATCTTCTG 60.016 38.462 15.24 0.00 43.91 3.02
5453 6102 5.635417 AACTTTAAAGCCAGATCTTCTGC 57.365 39.130 15.24 0.00 42.98 4.26
5454 6103 4.916183 ACTTTAAAGCCAGATCTTCTGCT 58.084 39.130 15.24 5.53 42.98 4.24
5455 6104 4.699257 ACTTTAAAGCCAGATCTTCTGCTG 59.301 41.667 15.24 2.87 42.98 4.41
5456 6105 2.875094 AAAGCCAGATCTTCTGCTGT 57.125 45.000 10.94 4.17 42.98 4.40
5457 6106 2.875094 AAGCCAGATCTTCTGCTGTT 57.125 45.000 10.94 0.00 42.98 3.16
5458 6107 3.988976 AAGCCAGATCTTCTGCTGTTA 57.011 42.857 10.94 0.00 42.98 2.41
5459 6108 3.988976 AGCCAGATCTTCTGCTGTTAA 57.011 42.857 9.71 0.00 42.98 2.01
5460 6109 4.500499 AGCCAGATCTTCTGCTGTTAAT 57.500 40.909 9.71 0.00 42.98 1.40
5461 6110 5.620738 AGCCAGATCTTCTGCTGTTAATA 57.379 39.130 9.71 0.00 42.98 0.98
5462 6111 5.363939 AGCCAGATCTTCTGCTGTTAATAC 58.636 41.667 9.71 0.00 42.98 1.89
5463 6112 5.104776 AGCCAGATCTTCTGCTGTTAATACA 60.105 40.000 9.71 0.00 42.98 2.29
5464 6113 5.762218 GCCAGATCTTCTGCTGTTAATACAT 59.238 40.000 0.00 0.00 42.98 2.29
5465 6114 6.073331 GCCAGATCTTCTGCTGTTAATACATC 60.073 42.308 0.00 0.00 42.98 3.06
5466 6115 6.988580 CCAGATCTTCTGCTGTTAATACATCA 59.011 38.462 0.00 0.00 42.98 3.07
5467 6116 7.660617 CCAGATCTTCTGCTGTTAATACATCAT 59.339 37.037 0.00 0.00 42.98 2.45
5468 6117 8.710551 CAGATCTTCTGCTGTTAATACATCATC 58.289 37.037 0.00 0.00 37.72 2.92
5469 6118 8.427276 AGATCTTCTGCTGTTAATACATCATCA 58.573 33.333 0.00 0.00 30.67 3.07
5470 6119 7.776933 TCTTCTGCTGTTAATACATCATCAC 57.223 36.000 0.00 0.00 30.67 3.06
5471 6120 7.330262 TCTTCTGCTGTTAATACATCATCACA 58.670 34.615 0.00 0.00 30.67 3.58
5472 6121 7.989170 TCTTCTGCTGTTAATACATCATCACAT 59.011 33.333 0.00 0.00 30.67 3.21
5473 6122 7.719778 TCTGCTGTTAATACATCATCACATC 57.280 36.000 0.00 0.00 30.67 3.06
5474 6123 7.274447 TCTGCTGTTAATACATCATCACATCA 58.726 34.615 0.00 0.00 30.67 3.07
5475 6124 7.769970 TCTGCTGTTAATACATCATCACATCAA 59.230 33.333 0.00 0.00 30.67 2.57
5476 6125 8.454570 TGCTGTTAATACATCATCACATCAAT 57.545 30.769 0.00 0.00 32.86 2.57
5477 6126 8.562052 TGCTGTTAATACATCATCACATCAATC 58.438 33.333 0.00 0.00 32.86 2.67
5478 6127 8.562052 GCTGTTAATACATCATCACATCAATCA 58.438 33.333 0.00 0.00 32.86 2.57
5483 6132 8.935614 AATACATCATCACATCAATCAATCCT 57.064 30.769 0.00 0.00 0.00 3.24
5484 6133 6.879276 ACATCATCACATCAATCAATCCTC 57.121 37.500 0.00 0.00 0.00 3.71
5485 6134 5.768662 ACATCATCACATCAATCAATCCTCC 59.231 40.000 0.00 0.00 0.00 4.30
5486 6135 5.376756 TCATCACATCAATCAATCCTCCA 57.623 39.130 0.00 0.00 0.00 3.86
5487 6136 5.374071 TCATCACATCAATCAATCCTCCAG 58.626 41.667 0.00 0.00 0.00 3.86
5488 6137 4.849813 TCACATCAATCAATCCTCCAGT 57.150 40.909 0.00 0.00 0.00 4.00
5489 6138 5.183530 TCACATCAATCAATCCTCCAGTT 57.816 39.130 0.00 0.00 0.00 3.16
5490 6139 5.573219 TCACATCAATCAATCCTCCAGTTT 58.427 37.500 0.00 0.00 0.00 2.66
5491 6140 6.012113 TCACATCAATCAATCCTCCAGTTTT 58.988 36.000 0.00 0.00 0.00 2.43
5492 6141 6.151648 TCACATCAATCAATCCTCCAGTTTTC 59.848 38.462 0.00 0.00 0.00 2.29
5493 6142 6.012113 ACATCAATCAATCCTCCAGTTTTCA 58.988 36.000 0.00 0.00 0.00 2.69
5494 6143 5.964958 TCAATCAATCCTCCAGTTTTCAC 57.035 39.130 0.00 0.00 0.00 3.18
5495 6144 4.766891 TCAATCAATCCTCCAGTTTTCACC 59.233 41.667 0.00 0.00 0.00 4.02
5496 6145 3.874383 TCAATCCTCCAGTTTTCACCA 57.126 42.857 0.00 0.00 0.00 4.17
5497 6146 4.177537 TCAATCCTCCAGTTTTCACCAA 57.822 40.909 0.00 0.00 0.00 3.67
5498 6147 3.888930 TCAATCCTCCAGTTTTCACCAAC 59.111 43.478 0.00 0.00 0.00 3.77
5499 6148 1.961793 TCCTCCAGTTTTCACCAACG 58.038 50.000 0.00 0.00 0.00 4.10
5500 6149 1.487142 TCCTCCAGTTTTCACCAACGA 59.513 47.619 0.00 0.00 0.00 3.85
5501 6150 1.602377 CCTCCAGTTTTCACCAACGAC 59.398 52.381 0.00 0.00 0.00 4.34
5502 6151 1.260561 CTCCAGTTTTCACCAACGACG 59.739 52.381 0.00 0.00 0.00 5.12
5503 6152 1.134759 TCCAGTTTTCACCAACGACGA 60.135 47.619 0.00 0.00 0.00 4.20
5504 6153 1.666700 CCAGTTTTCACCAACGACGAA 59.333 47.619 0.00 0.00 0.00 3.85
5505 6154 2.538132 CCAGTTTTCACCAACGACGAAC 60.538 50.000 0.00 0.00 0.00 3.95
5506 6155 1.667212 AGTTTTCACCAACGACGAACC 59.333 47.619 0.00 0.00 0.00 3.62
5507 6156 1.667212 GTTTTCACCAACGACGAACCT 59.333 47.619 0.00 0.00 0.00 3.50
5508 6157 2.027003 TTTCACCAACGACGAACCTT 57.973 45.000 0.00 0.00 0.00 3.50
5509 6158 1.574134 TTCACCAACGACGAACCTTC 58.426 50.000 0.00 0.00 0.00 3.46
5510 6159 0.249573 TCACCAACGACGAACCTTCC 60.250 55.000 0.00 0.00 0.00 3.46
5511 6160 1.070275 ACCAACGACGAACCTTCCC 59.930 57.895 0.00 0.00 0.00 3.97
5512 6161 1.370064 CCAACGACGAACCTTCCCT 59.630 57.895 0.00 0.00 0.00 4.20
5513 6162 0.250166 CCAACGACGAACCTTCCCTT 60.250 55.000 0.00 0.00 0.00 3.95
5514 6163 1.001181 CCAACGACGAACCTTCCCTTA 59.999 52.381 0.00 0.00 0.00 2.69
5515 6164 2.354403 CCAACGACGAACCTTCCCTTAT 60.354 50.000 0.00 0.00 0.00 1.73
5516 6165 2.928116 CAACGACGAACCTTCCCTTATC 59.072 50.000 0.00 0.00 0.00 1.75
5517 6166 2.173519 ACGACGAACCTTCCCTTATCA 58.826 47.619 0.00 0.00 0.00 2.15
5518 6167 2.764572 ACGACGAACCTTCCCTTATCAT 59.235 45.455 0.00 0.00 0.00 2.45
5519 6168 3.181478 ACGACGAACCTTCCCTTATCATC 60.181 47.826 0.00 0.00 0.00 2.92
5520 6169 3.068307 CGACGAACCTTCCCTTATCATCT 59.932 47.826 0.00 0.00 0.00 2.90
5521 6170 4.623002 GACGAACCTTCCCTTATCATCTC 58.377 47.826 0.00 0.00 0.00 2.75
5522 6171 4.290942 ACGAACCTTCCCTTATCATCTCT 58.709 43.478 0.00 0.00 0.00 3.10
5523 6172 5.455872 ACGAACCTTCCCTTATCATCTCTA 58.544 41.667 0.00 0.00 0.00 2.43
5524 6173 5.897824 ACGAACCTTCCCTTATCATCTCTAA 59.102 40.000 0.00 0.00 0.00 2.10
5525 6174 6.041069 ACGAACCTTCCCTTATCATCTCTAAG 59.959 42.308 0.00 0.00 0.00 2.18
5526 6175 6.517529 CGAACCTTCCCTTATCATCTCTAAGG 60.518 46.154 0.00 0.00 43.25 2.69
5527 6176 6.044411 ACCTTCCCTTATCATCTCTAAGGA 57.956 41.667 10.05 0.00 45.43 3.36
5528 6177 5.841783 ACCTTCCCTTATCATCTCTAAGGAC 59.158 44.000 10.05 0.00 45.43 3.85
5529 6178 5.247337 CCTTCCCTTATCATCTCTAAGGACC 59.753 48.000 10.05 0.00 45.43 4.46
5530 6179 4.408276 TCCCTTATCATCTCTAAGGACCG 58.592 47.826 10.05 0.00 45.43 4.79
5531 6180 3.056465 CCCTTATCATCTCTAAGGACCGC 60.056 52.174 10.05 0.00 45.43 5.68
5532 6181 3.056465 CCTTATCATCTCTAAGGACCGCC 60.056 52.174 3.51 0.00 45.43 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 1.179814 TGCCACATCAATGCAGCACA 61.180 50.000 0.00 0.00 35.16 4.57
22 23 2.536365 CACATGAAGCAATGCCACATC 58.464 47.619 0.00 0.00 0.00 3.06
185 196 5.655974 TGACTGTGAAGCTGAGAGATTCTAT 59.344 40.000 3.49 0.00 40.96 1.98
197 208 1.071228 TCATGTGCTGACTGTGAAGCT 59.929 47.619 11.92 0.00 40.21 3.74
210 221 5.779806 AGTACGTCACTAATTTCATGTGC 57.220 39.130 0.00 0.00 34.98 4.57
278 292 6.861055 CGGTTATTTGTGTGCTAGTTTTCAAT 59.139 34.615 0.00 0.00 0.00 2.57
280 294 5.527951 TCGGTTATTTGTGTGCTAGTTTTCA 59.472 36.000 0.00 0.00 0.00 2.69
281 295 5.992729 TCGGTTATTTGTGTGCTAGTTTTC 58.007 37.500 0.00 0.00 0.00 2.29
282 296 5.529800 ACTCGGTTATTTGTGTGCTAGTTTT 59.470 36.000 0.00 0.00 0.00 2.43
283 297 5.061179 ACTCGGTTATTTGTGTGCTAGTTT 58.939 37.500 0.00 0.00 0.00 2.66
284 298 4.638304 ACTCGGTTATTTGTGTGCTAGTT 58.362 39.130 0.00 0.00 0.00 2.24
285 299 4.267349 ACTCGGTTATTTGTGTGCTAGT 57.733 40.909 0.00 0.00 0.00 2.57
286 300 5.408356 AGTACTCGGTTATTTGTGTGCTAG 58.592 41.667 0.00 0.00 0.00 3.42
287 301 5.395682 AGTACTCGGTTATTTGTGTGCTA 57.604 39.130 0.00 0.00 0.00 3.49
288 302 4.243270 GAGTACTCGGTTATTTGTGTGCT 58.757 43.478 7.22 0.00 0.00 4.40
289 303 3.370061 GGAGTACTCGGTTATTTGTGTGC 59.630 47.826 16.56 0.00 0.00 4.57
290 304 4.625742 CAGGAGTACTCGGTTATTTGTGTG 59.374 45.833 16.56 0.00 0.00 3.82
291 305 4.817517 CAGGAGTACTCGGTTATTTGTGT 58.182 43.478 16.56 0.00 0.00 3.72
292 306 3.617263 GCAGGAGTACTCGGTTATTTGTG 59.383 47.826 16.56 4.21 0.00 3.33
293 307 3.514309 AGCAGGAGTACTCGGTTATTTGT 59.486 43.478 16.56 0.00 0.00 2.83
294 308 4.124851 AGCAGGAGTACTCGGTTATTTG 57.875 45.455 16.56 7.21 0.00 2.32
295 309 4.202131 GCTAGCAGGAGTACTCGGTTATTT 60.202 45.833 16.56 1.67 0.00 1.40
296 310 3.318557 GCTAGCAGGAGTACTCGGTTATT 59.681 47.826 16.56 3.13 0.00 1.40
297 311 2.885894 GCTAGCAGGAGTACTCGGTTAT 59.114 50.000 16.56 4.41 0.00 1.89
298 312 2.295885 GCTAGCAGGAGTACTCGGTTA 58.704 52.381 16.56 11.93 0.00 2.85
299 313 1.104630 GCTAGCAGGAGTACTCGGTT 58.895 55.000 16.56 11.45 0.00 4.44
300 314 0.752376 GGCTAGCAGGAGTACTCGGT 60.752 60.000 18.24 11.55 0.00 4.69
301 315 1.787057 CGGCTAGCAGGAGTACTCGG 61.787 65.000 18.24 12.12 0.00 4.63
302 316 1.096386 ACGGCTAGCAGGAGTACTCG 61.096 60.000 19.27 10.81 0.00 4.18
303 317 0.382515 CACGGCTAGCAGGAGTACTC 59.617 60.000 19.27 14.87 0.00 2.59
304 318 0.034380 TCACGGCTAGCAGGAGTACT 60.034 55.000 19.27 0.00 0.00 2.73
305 319 0.815734 TTCACGGCTAGCAGGAGTAC 59.184 55.000 19.27 0.00 0.00 2.73
306 320 1.103803 CTTCACGGCTAGCAGGAGTA 58.896 55.000 19.27 4.56 0.00 2.59
307 321 1.893786 CTTCACGGCTAGCAGGAGT 59.106 57.895 19.27 8.95 0.00 3.85
339 353 4.322499 CCTTTTTAACCCGACTAGCTCAGA 60.322 45.833 0.00 0.00 0.00 3.27
344 364 2.161012 GCACCTTTTTAACCCGACTAGC 59.839 50.000 0.00 0.00 0.00 3.42
352 372 8.032451 TCTTAATTATGCTGCACCTTTTTAACC 58.968 33.333 3.57 0.00 0.00 2.85
389 415 3.791353 CACAAAACAGACGGCTCTTTTTC 59.209 43.478 0.97 0.00 28.10 2.29
455 481 1.655484 TGAGCCGATTAGCATGTGTG 58.345 50.000 0.00 0.00 34.23 3.82
456 482 2.216046 CATGAGCCGATTAGCATGTGT 58.784 47.619 0.00 0.00 34.82 3.72
457 483 1.534163 CCATGAGCCGATTAGCATGTG 59.466 52.381 0.00 0.00 37.11 3.21
506 534 4.574892 TCATTATCCGCAGAACAGAAACA 58.425 39.130 0.00 0.00 0.00 2.83
568 608 5.780793 ACTCTACTGGTAGTGGACATTTTCT 59.219 40.000 12.43 0.00 32.13 2.52
569 609 6.038997 ACTCTACTGGTAGTGGACATTTTC 57.961 41.667 12.43 0.00 32.13 2.29
585 625 6.660094 CCTCAGGTCAAAGTAACTACTCTACT 59.340 42.308 0.00 0.00 34.99 2.57
586 626 6.658391 TCCTCAGGTCAAAGTAACTACTCTAC 59.342 42.308 0.00 0.00 34.99 2.59
587 627 6.787170 TCCTCAGGTCAAAGTAACTACTCTA 58.213 40.000 0.00 0.00 34.99 2.43
588 628 5.642165 TCCTCAGGTCAAAGTAACTACTCT 58.358 41.667 0.00 0.00 34.99 3.24
589 629 5.477637 ACTCCTCAGGTCAAAGTAACTACTC 59.522 44.000 0.00 0.00 34.99 2.59
734 779 2.124693 CGGGAGAGTGAGAGGGAGC 61.125 68.421 0.00 0.00 0.00 4.70
735 780 2.124693 GCGGGAGAGTGAGAGGGAG 61.125 68.421 0.00 0.00 0.00 4.30
736 781 2.043852 GCGGGAGAGTGAGAGGGA 60.044 66.667 0.00 0.00 0.00 4.20
737 782 1.671901 GAAGCGGGAGAGTGAGAGGG 61.672 65.000 0.00 0.00 0.00 4.30
738 783 0.967887 TGAAGCGGGAGAGTGAGAGG 60.968 60.000 0.00 0.00 0.00 3.69
739 784 0.172352 GTGAAGCGGGAGAGTGAGAG 59.828 60.000 0.00 0.00 0.00 3.20
740 785 1.251527 GGTGAAGCGGGAGAGTGAGA 61.252 60.000 0.00 0.00 0.00 3.27
744 789 4.070552 GCGGTGAAGCGGGAGAGT 62.071 66.667 3.89 0.00 0.00 3.24
759 820 0.739112 GAGAGTTGAAGGCTGGAGCG 60.739 60.000 0.00 0.00 43.26 5.03
900 966 2.127118 CAAGCTTGCGCCAAGACG 60.127 61.111 14.65 6.43 43.42 4.18
933 999 1.866601 GAAAAACCATGGCAGTGCAAC 59.133 47.619 18.61 0.22 0.00 4.17
937 1003 2.029649 CAGGAGAAAAACCATGGCAGTG 60.030 50.000 13.04 0.00 0.00 3.66
952 1027 4.019950 TGAAATCAGCATCAACTCAGGAGA 60.020 41.667 2.79 0.00 0.00 3.71
953 1028 4.259356 TGAAATCAGCATCAACTCAGGAG 58.741 43.478 0.00 0.00 0.00 3.69
992 1067 5.603596 CCTCCATCTCTCTCATTCTTGAAG 58.396 45.833 0.00 0.00 0.00 3.02
1031 1107 0.482446 TTTGGCCAAGGATCTGTGGT 59.518 50.000 19.48 0.00 37.23 4.16
1150 1226 6.533730 TGAGCACTTATGAGAAAAAGAAGGA 58.466 36.000 0.00 0.00 0.00 3.36
1151 1227 6.808008 TGAGCACTTATGAGAAAAAGAAGG 57.192 37.500 0.00 0.00 0.00 3.46
1166 1242 7.658575 AGCATAAAAACATTTTGATGAGCACTT 59.341 29.630 15.79 0.00 40.11 3.16
1308 1415 6.097412 AGGGAAAATCTCAAATTGGCACTATC 59.903 38.462 0.00 0.00 0.00 2.08
1356 1484 5.288232 CAGATGAGAGTTTGAGTTTCTAGCG 59.712 44.000 0.00 0.00 0.00 4.26
1358 1486 6.162079 TGCAGATGAGAGTTTGAGTTTCTAG 58.838 40.000 0.00 0.00 0.00 2.43
1402 1530 0.603975 GTGTCAGTCTTGGGCTGGAC 60.604 60.000 0.00 0.00 34.89 4.02
1483 1614 3.325293 TTCTTCTGCCTGTGAGCTAAG 57.675 47.619 0.00 0.00 0.00 2.18
1566 1697 5.840243 TCATTAGACCAAAATGATGCTGG 57.160 39.130 0.00 0.00 38.19 4.85
1740 1879 9.973661 TGTTAAAATGAAAGATAGATTCCCTGA 57.026 29.630 0.00 0.00 0.00 3.86
1830 1971 2.364002 GTTAGTGGGCTGCCAAAAGAAA 59.636 45.455 22.05 3.75 0.00 2.52
1831 1972 1.960689 GTTAGTGGGCTGCCAAAAGAA 59.039 47.619 22.05 4.63 0.00 2.52
1967 2108 3.827898 GCTCCTCCTGACGGACGG 61.828 72.222 0.00 0.00 34.92 4.79
2019 2160 2.802667 CGTTTCCTCCATCAGCGCG 61.803 63.158 0.00 0.00 0.00 6.86
2322 2463 2.346803 TGAGCCAACTGTCGAATTAGC 58.653 47.619 0.00 0.00 0.00 3.09
2324 2465 3.678056 ACTGAGCCAACTGTCGAATTA 57.322 42.857 0.00 0.00 0.00 1.40
2378 2521 8.608844 ATTTCAGTGAAGTTTCTGTTACTAGG 57.391 34.615 5.56 0.00 33.89 3.02
2520 2664 6.183347 CCTCTCCTTCCTGTGAAATAACATT 58.817 40.000 0.00 0.00 0.00 2.71
2578 2722 1.477558 CCACATTGGTCCCCAGATAGC 60.478 57.143 0.00 0.00 33.81 2.97
2633 2777 1.267574 TGCACCTCACCATCTCCTCC 61.268 60.000 0.00 0.00 0.00 4.30
2753 2897 1.002502 GTCCCCAAGGTACTGTGGC 60.003 63.158 9.21 0.00 40.86 5.01
2837 2981 1.201429 TGAACTCCTTGAGCCCCTCC 61.201 60.000 0.00 0.00 32.04 4.30
2888 3032 2.279252 CGGTCGCGGGAAATCGAT 60.279 61.111 6.13 0.00 37.06 3.59
2947 3091 6.099159 AGACTAGGTAAAAACTCACTCACC 57.901 41.667 0.00 0.00 0.00 4.02
2993 3171 5.741388 AGTAGCACTGAACAAAAGAACAG 57.259 39.130 0.00 0.00 36.58 3.16
3354 3537 0.315251 GAAGAAGGGCGCTTGCTTTT 59.685 50.000 22.05 9.48 39.13 2.27
3411 3594 4.917998 GCCTGTTTCGAGGAAAAGAAATTC 59.082 41.667 0.00 0.00 38.43 2.17
3591 3787 3.129813 TCTTGACCAAATGATGCAGCATC 59.870 43.478 26.18 26.18 40.88 3.91
3664 3860 6.092748 CGGGTAAAAATCAAAATCTGTCCAG 58.907 40.000 0.00 0.00 0.00 3.86
3671 3867 5.106869 GGCCAAACGGGTAAAAATCAAAATC 60.107 40.000 0.00 0.00 39.65 2.17
3675 3871 2.288273 CGGCCAAACGGGTAAAAATCAA 60.288 45.455 2.24 0.00 39.65 2.57
3701 3897 0.536006 AAAGTCCTCAGCCACTGCAC 60.536 55.000 0.00 0.00 41.13 4.57
3852 4048 2.383855 CTAGAGAGGAGGTGGAGTTGG 58.616 57.143 0.00 0.00 0.00 3.77
3853 4049 1.754226 GCTAGAGAGGAGGTGGAGTTG 59.246 57.143 0.00 0.00 0.00 3.16
3854 4050 1.643811 AGCTAGAGAGGAGGTGGAGTT 59.356 52.381 0.00 0.00 0.00 3.01
3873 4077 6.655003 TGTCTTTTGGGAGCATCTTTTACTAG 59.345 38.462 0.00 0.00 33.73 2.57
3874 4078 6.430000 GTGTCTTTTGGGAGCATCTTTTACTA 59.570 38.462 0.00 0.00 33.73 1.82
3875 4079 5.241728 GTGTCTTTTGGGAGCATCTTTTACT 59.758 40.000 0.00 0.00 33.73 2.24
3876 4080 5.009610 TGTGTCTTTTGGGAGCATCTTTTAC 59.990 40.000 0.00 0.00 33.73 2.01
3898 4131 3.243737 TGTCTCGATGCTAAGTGTGTTGT 60.244 43.478 0.00 0.00 0.00 3.32
3899 4132 3.317150 TGTCTCGATGCTAAGTGTGTTG 58.683 45.455 0.00 0.00 0.00 3.33
3905 4138 6.635030 TGTATGTATGTCTCGATGCTAAGT 57.365 37.500 0.00 0.00 0.00 2.24
3941 4174 5.118664 CGAATTAGTCAAAAGAAGTCTCGCA 59.881 40.000 0.00 0.00 0.00 5.10
3964 4198 5.410924 TCTACTCATGTTTCTTCCACATCG 58.589 41.667 0.00 0.00 32.25 3.84
3970 4204 5.407407 TCCACTCTACTCATGTTTCTTCC 57.593 43.478 0.00 0.00 0.00 3.46
3984 4218 6.928979 TTCGAAAACATTTGTTCCACTCTA 57.071 33.333 0.00 0.00 37.25 2.43
4003 4261 6.403200 GGTGCATTTAGCTTTATCACTTTCGA 60.403 38.462 0.00 0.00 45.94 3.71
4005 4263 5.739161 CGGTGCATTTAGCTTTATCACTTTC 59.261 40.000 0.00 0.00 45.94 2.62
4091 4354 3.798337 ACAAAAGAAAAGATGCAGCAACG 59.202 39.130 4.07 0.00 0.00 4.10
4168 4585 3.610619 CTCACCTGCATGCCCGTCA 62.611 63.158 16.68 0.00 0.00 4.35
4448 4871 1.488705 CCCACTCCACCACTGCCTTA 61.489 60.000 0.00 0.00 0.00 2.69
4528 4951 0.617413 CCCTGGAAGCTGTGATCAGT 59.383 55.000 0.00 0.00 43.05 3.41
4581 5010 1.032014 GTCAAGTCAAGCAAAGGCCA 58.968 50.000 5.01 0.00 42.56 5.36
4692 5121 6.455647 TGGACAAAGTAGATACACACAAGAG 58.544 40.000 0.00 0.00 0.00 2.85
4814 5463 4.814234 CCTGCACTCAACACTAACAGTAAA 59.186 41.667 0.00 0.00 0.00 2.01
4932 5581 9.120538 ACTTCTAAAAATCAGCACTCTTTTACA 57.879 29.630 0.00 0.00 0.00 2.41
4954 5603 6.831769 ACAACGTGACAATGATCATTACTTC 58.168 36.000 20.32 16.16 0.00 3.01
4989 5638 7.538334 TGCGAATTTGTAATGTGAGAATTTCTG 59.462 33.333 3.03 0.00 0.00 3.02
4990 5639 7.592938 TGCGAATTTGTAATGTGAGAATTTCT 58.407 30.769 0.00 0.00 0.00 2.52
4993 5642 7.485913 GTGATGCGAATTTGTAATGTGAGAATT 59.514 33.333 0.00 0.00 0.00 2.17
5037 5686 3.826157 TGCATGGGAGGTGTTTTAAAGAG 59.174 43.478 0.00 0.00 0.00 2.85
5039 5688 4.806640 ATGCATGGGAGGTGTTTTAAAG 57.193 40.909 0.00 0.00 0.00 1.85
5040 5689 6.672266 TTAATGCATGGGAGGTGTTTTAAA 57.328 33.333 0.00 0.00 0.00 1.52
5041 5690 6.865834 ATTAATGCATGGGAGGTGTTTTAA 57.134 33.333 0.00 0.00 0.00 1.52
5042 5691 6.865834 AATTAATGCATGGGAGGTGTTTTA 57.134 33.333 0.00 0.00 0.00 1.52
5048 5697 8.602472 TTTTACTTAATTAATGCATGGGAGGT 57.398 30.769 0.00 0.00 0.00 3.85
5135 5784 9.403583 ACCTTTTATGGACGATGTAACAATTAT 57.596 29.630 0.00 0.00 0.00 1.28
5136 5785 8.795842 ACCTTTTATGGACGATGTAACAATTA 57.204 30.769 0.00 0.00 0.00 1.40
5137 5786 7.696992 ACCTTTTATGGACGATGTAACAATT 57.303 32.000 0.00 0.00 0.00 2.32
5138 5787 7.825270 TGTACCTTTTATGGACGATGTAACAAT 59.175 33.333 0.00 0.00 0.00 2.71
5139 5788 7.160049 TGTACCTTTTATGGACGATGTAACAA 58.840 34.615 0.00 0.00 0.00 2.83
5140 5789 6.699366 TGTACCTTTTATGGACGATGTAACA 58.301 36.000 0.00 0.00 0.00 2.41
5141 5790 7.599630 TTGTACCTTTTATGGACGATGTAAC 57.400 36.000 0.00 0.00 0.00 2.50
5143 5792 9.701098 GATATTGTACCTTTTATGGACGATGTA 57.299 33.333 0.00 0.00 0.00 2.29
5144 5793 8.208224 TGATATTGTACCTTTTATGGACGATGT 58.792 33.333 0.00 0.00 0.00 3.06
5145 5794 8.601845 TGATATTGTACCTTTTATGGACGATG 57.398 34.615 0.00 0.00 0.00 3.84
5146 5795 9.793259 AATGATATTGTACCTTTTATGGACGAT 57.207 29.630 0.00 0.00 0.00 3.73
5147 5796 9.268268 GAATGATATTGTACCTTTTATGGACGA 57.732 33.333 0.00 0.00 0.00 4.20
5148 5797 9.051679 TGAATGATATTGTACCTTTTATGGACG 57.948 33.333 0.00 0.00 0.00 4.79
5155 5804 9.289782 GAGCCTATGAATGATATTGTACCTTTT 57.710 33.333 0.00 0.00 0.00 2.27
5156 5805 7.885399 GGAGCCTATGAATGATATTGTACCTTT 59.115 37.037 0.00 0.00 0.00 3.11
5157 5806 7.238514 AGGAGCCTATGAATGATATTGTACCTT 59.761 37.037 0.00 0.00 0.00 3.50
5158 5807 6.732862 AGGAGCCTATGAATGATATTGTACCT 59.267 38.462 0.00 0.00 0.00 3.08
5159 5808 6.951971 AGGAGCCTATGAATGATATTGTACC 58.048 40.000 0.00 0.00 0.00 3.34
5160 5809 6.754209 CGAGGAGCCTATGAATGATATTGTAC 59.246 42.308 0.00 0.00 0.00 2.90
5161 5810 6.663523 TCGAGGAGCCTATGAATGATATTGTA 59.336 38.462 0.00 0.00 0.00 2.41
5162 5811 5.481824 TCGAGGAGCCTATGAATGATATTGT 59.518 40.000 0.00 0.00 0.00 2.71
5163 5812 5.970592 TCGAGGAGCCTATGAATGATATTG 58.029 41.667 0.00 0.00 0.00 1.90
5164 5813 6.402222 GTTCGAGGAGCCTATGAATGATATT 58.598 40.000 6.88 0.00 0.00 1.28
5165 5814 5.105146 GGTTCGAGGAGCCTATGAATGATAT 60.105 44.000 6.88 0.00 30.11 1.63
5166 5815 4.220821 GGTTCGAGGAGCCTATGAATGATA 59.779 45.833 6.88 0.00 30.11 2.15
5167 5816 3.007398 GGTTCGAGGAGCCTATGAATGAT 59.993 47.826 6.88 0.00 30.11 2.45
5168 5817 2.365617 GGTTCGAGGAGCCTATGAATGA 59.634 50.000 6.88 0.00 30.11 2.57
5169 5818 2.103094 TGGTTCGAGGAGCCTATGAATG 59.897 50.000 6.88 0.00 33.98 2.67
5170 5819 2.398588 TGGTTCGAGGAGCCTATGAAT 58.601 47.619 6.88 0.00 33.98 2.57
5171 5820 1.860641 TGGTTCGAGGAGCCTATGAA 58.139 50.000 0.28 0.00 33.98 2.57
5172 5821 1.860641 TTGGTTCGAGGAGCCTATGA 58.139 50.000 0.28 0.00 33.98 2.15
5173 5822 2.548920 GGATTGGTTCGAGGAGCCTATG 60.549 54.545 0.80 0.00 33.98 2.23
5174 5823 1.694696 GGATTGGTTCGAGGAGCCTAT 59.305 52.381 0.28 0.00 33.98 2.57
5175 5824 1.120530 GGATTGGTTCGAGGAGCCTA 58.879 55.000 0.28 0.00 33.98 3.93
5176 5825 1.627297 GGGATTGGTTCGAGGAGCCT 61.627 60.000 0.28 0.00 33.98 4.58
5177 5826 1.153147 GGGATTGGTTCGAGGAGCC 60.153 63.158 0.00 0.00 33.44 4.70
5178 5827 1.069358 CTAGGGATTGGTTCGAGGAGC 59.931 57.143 0.00 0.00 0.00 4.70
5179 5828 2.101582 CACTAGGGATTGGTTCGAGGAG 59.898 54.545 0.00 0.00 0.00 3.69
5180 5829 2.108168 CACTAGGGATTGGTTCGAGGA 58.892 52.381 0.00 0.00 0.00 3.71
5181 5830 1.139058 CCACTAGGGATTGGTTCGAGG 59.861 57.143 0.00 0.00 40.01 4.63
5182 5831 1.473434 GCCACTAGGGATTGGTTCGAG 60.473 57.143 0.00 0.00 40.01 4.04
5183 5832 0.539986 GCCACTAGGGATTGGTTCGA 59.460 55.000 0.00 0.00 40.01 3.71
5184 5833 0.541863 AGCCACTAGGGATTGGTTCG 59.458 55.000 0.00 0.00 40.01 3.95
5185 5834 1.559682 TCAGCCACTAGGGATTGGTTC 59.440 52.381 0.00 0.00 40.01 3.62
5186 5835 1.668826 TCAGCCACTAGGGATTGGTT 58.331 50.000 0.00 0.00 40.01 3.67
5187 5836 1.668826 TTCAGCCACTAGGGATTGGT 58.331 50.000 0.00 0.00 40.01 3.67
5188 5837 2.806945 TTTCAGCCACTAGGGATTGG 57.193 50.000 0.00 0.00 40.01 3.16
5189 5838 5.654497 GAAATTTTCAGCCACTAGGGATTG 58.346 41.667 4.25 0.00 40.01 2.67
5190 5839 4.399303 CGAAATTTTCAGCCACTAGGGATT 59.601 41.667 9.66 0.00 40.01 3.01
5191 5840 3.947834 CGAAATTTTCAGCCACTAGGGAT 59.052 43.478 9.66 0.00 40.01 3.85
5192 5841 3.343617 CGAAATTTTCAGCCACTAGGGA 58.656 45.455 9.66 0.00 40.01 4.20
5193 5842 2.159379 GCGAAATTTTCAGCCACTAGGG 60.159 50.000 9.66 0.00 40.85 3.53
5194 5843 2.476185 CGCGAAATTTTCAGCCACTAGG 60.476 50.000 0.00 0.00 38.23 3.02
5195 5844 2.415168 TCGCGAAATTTTCAGCCACTAG 59.585 45.455 6.20 0.00 0.00 2.57
5196 5845 2.418692 TCGCGAAATTTTCAGCCACTA 58.581 42.857 6.20 0.00 0.00 2.74
5197 5846 1.234821 TCGCGAAATTTTCAGCCACT 58.765 45.000 6.20 0.00 0.00 4.00
5198 5847 1.713932 GTTCGCGAAATTTTCAGCCAC 59.286 47.619 25.24 2.90 0.00 5.01
5199 5848 1.335506 GGTTCGCGAAATTTTCAGCCA 60.336 47.619 25.24 0.00 0.00 4.75
5200 5849 1.068541 AGGTTCGCGAAATTTTCAGCC 60.069 47.619 25.24 17.37 0.00 4.85
5201 5850 2.331809 AGGTTCGCGAAATTTTCAGC 57.668 45.000 25.24 9.61 0.00 4.26
5202 5851 3.125316 AGCTAGGTTCGCGAAATTTTCAG 59.875 43.478 25.24 14.99 0.00 3.02
5203 5852 3.071479 AGCTAGGTTCGCGAAATTTTCA 58.929 40.909 25.24 4.97 0.00 2.69
5204 5853 3.741805 AGCTAGGTTCGCGAAATTTTC 57.258 42.857 25.24 10.64 0.00 2.29
5205 5854 5.813080 AATAGCTAGGTTCGCGAAATTTT 57.187 34.783 25.24 11.61 0.00 1.82
5206 5855 5.353123 TGAAATAGCTAGGTTCGCGAAATTT 59.647 36.000 25.24 21.81 0.00 1.82
5207 5856 4.873827 TGAAATAGCTAGGTTCGCGAAATT 59.126 37.500 25.24 16.75 0.00 1.82
5208 5857 4.439057 TGAAATAGCTAGGTTCGCGAAAT 58.561 39.130 25.24 17.58 0.00 2.17
5209 5858 3.852286 TGAAATAGCTAGGTTCGCGAAA 58.148 40.909 25.24 7.40 0.00 3.46
5210 5859 3.513680 TGAAATAGCTAGGTTCGCGAA 57.486 42.857 19.38 19.38 0.00 4.70
5211 5860 3.381045 CATGAAATAGCTAGGTTCGCGA 58.619 45.455 3.71 3.71 0.00 5.87
5212 5861 2.476619 CCATGAAATAGCTAGGTTCGCG 59.523 50.000 0.00 0.00 0.00 5.87
5213 5862 2.808543 CCCATGAAATAGCTAGGTTCGC 59.191 50.000 0.00 0.00 0.00 4.70
5214 5863 4.073293 ACCCATGAAATAGCTAGGTTCG 57.927 45.455 0.00 4.29 0.00 3.95
5215 5864 5.763698 GGTAACCCATGAAATAGCTAGGTTC 59.236 44.000 12.99 12.15 37.34 3.62
5216 5865 5.432060 AGGTAACCCATGAAATAGCTAGGTT 59.568 40.000 13.83 13.83 39.38 3.50
5217 5866 4.975794 AGGTAACCCATGAAATAGCTAGGT 59.024 41.667 0.00 0.00 37.17 3.08
5218 5867 5.568620 AGGTAACCCATGAAATAGCTAGG 57.431 43.478 0.00 0.00 37.17 3.02
5219 5868 9.574516 AAATAAGGTAACCCATGAAATAGCTAG 57.425 33.333 0.00 0.00 37.17 3.42
5220 5869 9.349713 CAAATAAGGTAACCCATGAAATAGCTA 57.650 33.333 0.00 0.00 37.17 3.32
5221 5870 7.201911 GCAAATAAGGTAACCCATGAAATAGCT 60.202 37.037 0.00 0.00 37.17 3.32
5222 5871 6.923508 GCAAATAAGGTAACCCATGAAATAGC 59.076 38.462 0.00 0.00 37.17 2.97
5223 5872 8.237811 AGCAAATAAGGTAACCCATGAAATAG 57.762 34.615 0.00 0.00 37.17 1.73
5224 5873 8.602472 AAGCAAATAAGGTAACCCATGAAATA 57.398 30.769 0.00 0.00 37.17 1.40
5225 5874 7.494922 AAGCAAATAAGGTAACCCATGAAAT 57.505 32.000 0.00 0.00 37.17 2.17
5226 5875 6.926630 AAGCAAATAAGGTAACCCATGAAA 57.073 33.333 0.00 0.00 37.17 2.69
5227 5876 6.948886 TGTAAGCAAATAAGGTAACCCATGAA 59.051 34.615 0.00 0.00 37.17 2.57
5228 5877 6.486056 TGTAAGCAAATAAGGTAACCCATGA 58.514 36.000 0.00 0.00 37.17 3.07
5229 5878 6.767524 TGTAAGCAAATAAGGTAACCCATG 57.232 37.500 0.00 0.00 37.17 3.66
5230 5879 6.895204 ACATGTAAGCAAATAAGGTAACCCAT 59.105 34.615 0.00 0.00 37.17 4.00
5231 5880 6.249951 ACATGTAAGCAAATAAGGTAACCCA 58.750 36.000 0.00 0.00 37.17 4.51
5232 5881 6.769134 ACATGTAAGCAAATAAGGTAACCC 57.231 37.500 0.00 0.00 37.17 4.11
5233 5882 8.732531 TGTAACATGTAAGCAAATAAGGTAACC 58.267 33.333 0.00 0.00 37.17 2.85
5237 5886 9.019656 TCATTGTAACATGTAAGCAAATAAGGT 57.980 29.630 0.00 0.00 0.00 3.50
5242 5891 9.926158 TTTGATCATTGTAACATGTAAGCAAAT 57.074 25.926 0.00 0.00 0.00 2.32
5243 5892 9.926158 ATTTGATCATTGTAACATGTAAGCAAA 57.074 25.926 0.00 1.65 0.00 3.68
5244 5893 9.571810 GATTTGATCATTGTAACATGTAAGCAA 57.428 29.630 0.00 5.46 0.00 3.91
5245 5894 8.959548 AGATTTGATCATTGTAACATGTAAGCA 58.040 29.630 0.00 0.00 0.00 3.91
5277 5926 9.308318 GTTACTTTTTGGCTTGTGATTTTTCTA 57.692 29.630 0.00 0.00 0.00 2.10
5278 5927 7.821846 TGTTACTTTTTGGCTTGTGATTTTTCT 59.178 29.630 0.00 0.00 0.00 2.52
5279 5928 7.969314 TGTTACTTTTTGGCTTGTGATTTTTC 58.031 30.769 0.00 0.00 0.00 2.29
5280 5929 7.606073 ACTGTTACTTTTTGGCTTGTGATTTTT 59.394 29.630 0.00 0.00 0.00 1.94
5281 5930 7.102993 ACTGTTACTTTTTGGCTTGTGATTTT 58.897 30.769 0.00 0.00 0.00 1.82
5282 5931 6.639563 ACTGTTACTTTTTGGCTTGTGATTT 58.360 32.000 0.00 0.00 0.00 2.17
5283 5932 6.220726 ACTGTTACTTTTTGGCTTGTGATT 57.779 33.333 0.00 0.00 0.00 2.57
5284 5933 5.852282 ACTGTTACTTTTTGGCTTGTGAT 57.148 34.783 0.00 0.00 0.00 3.06
5285 5934 5.652994 AACTGTTACTTTTTGGCTTGTGA 57.347 34.783 0.00 0.00 0.00 3.58
5286 5935 7.199766 TGATAACTGTTACTTTTTGGCTTGTG 58.800 34.615 1.73 0.00 0.00 3.33
5287 5936 7.341445 TGATAACTGTTACTTTTTGGCTTGT 57.659 32.000 1.73 0.00 0.00 3.16
5288 5937 8.641499 TTTGATAACTGTTACTTTTTGGCTTG 57.359 30.769 1.73 0.00 0.00 4.01
5289 5938 9.313118 CTTTTGATAACTGTTACTTTTTGGCTT 57.687 29.630 1.73 0.00 0.00 4.35
5290 5939 7.438160 GCTTTTGATAACTGTTACTTTTTGGCT 59.562 33.333 1.73 0.00 0.00 4.75
5291 5940 7.438160 AGCTTTTGATAACTGTTACTTTTTGGC 59.562 33.333 1.73 3.36 0.00 4.52
5292 5941 8.755018 CAGCTTTTGATAACTGTTACTTTTTGG 58.245 33.333 1.73 0.00 0.00 3.28
5293 5942 8.268738 GCAGCTTTTGATAACTGTTACTTTTTG 58.731 33.333 1.73 0.00 32.65 2.44
5294 5943 7.978975 TGCAGCTTTTGATAACTGTTACTTTTT 59.021 29.630 1.73 0.00 32.65 1.94
5295 5944 7.488322 TGCAGCTTTTGATAACTGTTACTTTT 58.512 30.769 1.73 0.00 32.65 2.27
5296 5945 7.038154 TGCAGCTTTTGATAACTGTTACTTT 57.962 32.000 1.73 0.00 32.65 2.66
5297 5946 6.633500 TGCAGCTTTTGATAACTGTTACTT 57.367 33.333 1.73 0.00 32.65 2.24
5298 5947 5.335191 GCTGCAGCTTTTGATAACTGTTACT 60.335 40.000 31.33 0.00 38.21 2.24
5299 5948 4.853743 GCTGCAGCTTTTGATAACTGTTAC 59.146 41.667 31.33 0.00 38.21 2.50
5300 5949 5.046910 GCTGCAGCTTTTGATAACTGTTA 57.953 39.130 31.33 2.26 38.21 2.41
5301 5950 3.905784 GCTGCAGCTTTTGATAACTGTT 58.094 40.909 31.33 0.00 38.21 3.16
5302 5951 3.565905 GCTGCAGCTTTTGATAACTGT 57.434 42.857 31.33 0.00 38.21 3.55
5335 5984 4.932200 CACAATAAAGACCAGAGGACACTC 59.068 45.833 0.00 0.00 44.31 3.51
5336 5985 4.348168 ACACAATAAAGACCAGAGGACACT 59.652 41.667 0.00 0.00 0.00 3.55
5337 5986 4.642429 ACACAATAAAGACCAGAGGACAC 58.358 43.478 0.00 0.00 0.00 3.67
5338 5987 4.346709 TGACACAATAAAGACCAGAGGACA 59.653 41.667 0.00 0.00 0.00 4.02
5339 5988 4.894784 TGACACAATAAAGACCAGAGGAC 58.105 43.478 0.00 0.00 0.00 3.85
5340 5989 5.560722 TTGACACAATAAAGACCAGAGGA 57.439 39.130 0.00 0.00 0.00 3.71
5341 5990 5.939883 TGATTGACACAATAAAGACCAGAGG 59.060 40.000 0.00 0.00 0.00 3.69
5357 6006 6.128035 CCCGAACAATATGAAAGTGATTGACA 60.128 38.462 1.10 0.00 35.12 3.58
5358 6007 6.128007 ACCCGAACAATATGAAAGTGATTGAC 60.128 38.462 1.10 0.00 35.12 3.18
5359 6008 5.943416 ACCCGAACAATATGAAAGTGATTGA 59.057 36.000 1.10 0.00 35.12 2.57
5360 6009 6.194796 ACCCGAACAATATGAAAGTGATTG 57.805 37.500 0.00 0.00 36.77 2.67
5361 6010 6.834168 AACCCGAACAATATGAAAGTGATT 57.166 33.333 0.00 0.00 0.00 2.57
5362 6011 6.834168 AAACCCGAACAATATGAAAGTGAT 57.166 33.333 0.00 0.00 0.00 3.06
5363 6012 6.711194 TGTAAACCCGAACAATATGAAAGTGA 59.289 34.615 0.00 0.00 0.00 3.41
5364 6013 6.904498 TGTAAACCCGAACAATATGAAAGTG 58.096 36.000 0.00 0.00 0.00 3.16
5365 6014 6.713450 ACTGTAAACCCGAACAATATGAAAGT 59.287 34.615 0.00 0.00 0.00 2.66
5366 6015 7.021196 CACTGTAAACCCGAACAATATGAAAG 58.979 38.462 0.00 0.00 0.00 2.62
5367 6016 6.711194 TCACTGTAAACCCGAACAATATGAAA 59.289 34.615 0.00 0.00 0.00 2.69
5368 6017 6.231951 TCACTGTAAACCCGAACAATATGAA 58.768 36.000 0.00 0.00 0.00 2.57
5369 6018 5.795972 TCACTGTAAACCCGAACAATATGA 58.204 37.500 0.00 0.00 0.00 2.15
5370 6019 5.064707 CCTCACTGTAAACCCGAACAATATG 59.935 44.000 0.00 0.00 0.00 1.78
5371 6020 5.183228 CCTCACTGTAAACCCGAACAATAT 58.817 41.667 0.00 0.00 0.00 1.28
5372 6021 4.571919 CCTCACTGTAAACCCGAACAATA 58.428 43.478 0.00 0.00 0.00 1.90
5373 6022 3.408634 CCTCACTGTAAACCCGAACAAT 58.591 45.455 0.00 0.00 0.00 2.71
5374 6023 2.841215 CCTCACTGTAAACCCGAACAA 58.159 47.619 0.00 0.00 0.00 2.83
5375 6024 1.541670 GCCTCACTGTAAACCCGAACA 60.542 52.381 0.00 0.00 0.00 3.18
5376 6025 1.154197 GCCTCACTGTAAACCCGAAC 58.846 55.000 0.00 0.00 0.00 3.95
5377 6026 0.759959 TGCCTCACTGTAAACCCGAA 59.240 50.000 0.00 0.00 0.00 4.30
5378 6027 0.320374 CTGCCTCACTGTAAACCCGA 59.680 55.000 0.00 0.00 0.00 5.14
5379 6028 0.034896 ACTGCCTCACTGTAAACCCG 59.965 55.000 0.00 0.00 0.00 5.28
5380 6029 1.880027 CAACTGCCTCACTGTAAACCC 59.120 52.381 0.00 0.00 0.00 4.11
5381 6030 1.266989 GCAACTGCCTCACTGTAAACC 59.733 52.381 0.00 0.00 34.31 3.27
5382 6031 1.946768 TGCAACTGCCTCACTGTAAAC 59.053 47.619 0.00 0.00 41.18 2.01
5383 6032 2.221169 CTGCAACTGCCTCACTGTAAA 58.779 47.619 0.00 0.00 41.18 2.01
5384 6033 1.882912 CTGCAACTGCCTCACTGTAA 58.117 50.000 0.00 0.00 41.18 2.41
5385 6034 0.603707 GCTGCAACTGCCTCACTGTA 60.604 55.000 0.00 0.00 41.18 2.74
5386 6035 1.895707 GCTGCAACTGCCTCACTGT 60.896 57.895 0.00 0.00 41.18 3.55
5387 6036 2.623915 GGCTGCAACTGCCTCACTG 61.624 63.158 8.16 0.00 43.62 3.66
5388 6037 2.282040 GGCTGCAACTGCCTCACT 60.282 61.111 8.16 0.00 43.62 3.41
5389 6038 3.368571 GGGCTGCAACTGCCTCAC 61.369 66.667 14.47 0.00 45.73 3.51
5402 6051 4.269523 TTGCACAGAAGGCGGGCT 62.270 61.111 0.00 0.00 0.00 5.19
5403 6052 3.741476 CTTGCACAGAAGGCGGGC 61.741 66.667 0.00 0.00 0.00 6.13
5404 6053 3.058160 CCTTGCACAGAAGGCGGG 61.058 66.667 0.00 0.00 36.31 6.13
5405 6054 0.962356 ATTCCTTGCACAGAAGGCGG 60.962 55.000 0.00 0.00 42.18 6.13
5406 6055 1.737838 TATTCCTTGCACAGAAGGCG 58.262 50.000 0.00 0.00 42.18 5.52
5407 6056 3.367395 GGTTTATTCCTTGCACAGAAGGC 60.367 47.826 0.00 0.00 42.18 4.35
5408 6057 3.826157 TGGTTTATTCCTTGCACAGAAGG 59.174 43.478 4.13 0.00 43.61 3.46
5409 6058 5.452078 TTGGTTTATTCCTTGCACAGAAG 57.548 39.130 4.13 0.00 0.00 2.85
5410 6059 5.362430 AGTTTGGTTTATTCCTTGCACAGAA 59.638 36.000 0.33 0.33 0.00 3.02
5411 6060 4.892934 AGTTTGGTTTATTCCTTGCACAGA 59.107 37.500 0.00 0.00 0.00 3.41
5412 6061 5.200368 AGTTTGGTTTATTCCTTGCACAG 57.800 39.130 0.00 0.00 0.00 3.66
5413 6062 5.606348 AAGTTTGGTTTATTCCTTGCACA 57.394 34.783 0.00 0.00 0.00 4.57
5414 6063 8.426881 TTTAAAGTTTGGTTTATTCCTTGCAC 57.573 30.769 0.00 0.00 0.00 4.57
5415 6064 7.225734 GCTTTAAAGTTTGGTTTATTCCTTGCA 59.774 33.333 16.38 0.00 0.00 4.08
5416 6065 7.307751 GGCTTTAAAGTTTGGTTTATTCCTTGC 60.308 37.037 16.38 0.00 0.00 4.01
5417 6066 7.713073 TGGCTTTAAAGTTTGGTTTATTCCTTG 59.287 33.333 16.38 0.00 0.00 3.61
5418 6067 7.797062 TGGCTTTAAAGTTTGGTTTATTCCTT 58.203 30.769 16.38 0.00 0.00 3.36
5419 6068 7.289084 TCTGGCTTTAAAGTTTGGTTTATTCCT 59.711 33.333 16.38 0.00 0.00 3.36
5420 6069 7.438564 TCTGGCTTTAAAGTTTGGTTTATTCC 58.561 34.615 16.38 5.32 0.00 3.01
5421 6070 9.140286 GATCTGGCTTTAAAGTTTGGTTTATTC 57.860 33.333 16.38 0.00 0.00 1.75
5422 6071 8.870116 AGATCTGGCTTTAAAGTTTGGTTTATT 58.130 29.630 16.38 0.00 0.00 1.40
5423 6072 8.422577 AGATCTGGCTTTAAAGTTTGGTTTAT 57.577 30.769 16.38 1.06 0.00 1.40
5424 6073 7.833285 AGATCTGGCTTTAAAGTTTGGTTTA 57.167 32.000 16.38 0.00 0.00 2.01
5425 6074 6.731292 AGATCTGGCTTTAAAGTTTGGTTT 57.269 33.333 16.38 0.00 0.00 3.27
5426 6075 6.551227 AGAAGATCTGGCTTTAAAGTTTGGTT 59.449 34.615 16.38 2.80 0.00 3.67
5427 6076 6.015940 CAGAAGATCTGGCTTTAAAGTTTGGT 60.016 38.462 16.38 3.43 40.71 3.67
5428 6077 6.385033 CAGAAGATCTGGCTTTAAAGTTTGG 58.615 40.000 16.38 5.43 40.71 3.28
5429 6078 5.860716 GCAGAAGATCTGGCTTTAAAGTTTG 59.139 40.000 16.38 7.02 44.43 2.93
5430 6079 5.772169 AGCAGAAGATCTGGCTTTAAAGTTT 59.228 36.000 16.38 0.00 44.43 2.66
5431 6080 5.182760 CAGCAGAAGATCTGGCTTTAAAGTT 59.817 40.000 16.38 1.18 44.43 2.66
5432 6081 4.699257 CAGCAGAAGATCTGGCTTTAAAGT 59.301 41.667 16.38 0.00 44.43 2.66
5433 6082 4.699257 ACAGCAGAAGATCTGGCTTTAAAG 59.301 41.667 11.02 11.02 44.43 1.85
5434 6083 4.655963 ACAGCAGAAGATCTGGCTTTAAA 58.344 39.130 12.61 0.00 44.43 1.52
5435 6084 4.292186 ACAGCAGAAGATCTGGCTTTAA 57.708 40.909 12.61 0.00 44.43 1.52
5436 6085 3.988976 ACAGCAGAAGATCTGGCTTTA 57.011 42.857 12.61 0.00 44.43 1.85
5437 6086 2.875094 ACAGCAGAAGATCTGGCTTT 57.125 45.000 12.61 5.79 44.43 3.51
5438 6087 2.875094 AACAGCAGAAGATCTGGCTT 57.125 45.000 12.61 4.45 44.43 4.35
5439 6088 3.988976 TTAACAGCAGAAGATCTGGCT 57.011 42.857 10.15 10.15 44.43 4.75
5440 6089 5.118990 TGTATTAACAGCAGAAGATCTGGC 58.881 41.667 9.25 0.56 44.43 4.85
5441 6090 6.988580 TGATGTATTAACAGCAGAAGATCTGG 59.011 38.462 9.25 0.00 46.59 3.86
5452 6101 8.562052 TGATTGATGTGATGATGTATTAACAGC 58.438 33.333 0.00 0.00 42.47 4.40
5458 6107 8.935614 AGGATTGATTGATGTGATGATGTATT 57.064 30.769 0.00 0.00 0.00 1.89
5459 6108 7.610692 GGAGGATTGATTGATGTGATGATGTAT 59.389 37.037 0.00 0.00 0.00 2.29
5460 6109 6.938596 GGAGGATTGATTGATGTGATGATGTA 59.061 38.462 0.00 0.00 0.00 2.29
5461 6110 5.768662 GGAGGATTGATTGATGTGATGATGT 59.231 40.000 0.00 0.00 0.00 3.06
5462 6111 5.768164 TGGAGGATTGATTGATGTGATGATG 59.232 40.000 0.00 0.00 0.00 3.07
5463 6112 5.948842 TGGAGGATTGATTGATGTGATGAT 58.051 37.500 0.00 0.00 0.00 2.45
5464 6113 5.104235 ACTGGAGGATTGATTGATGTGATGA 60.104 40.000 0.00 0.00 0.00 2.92
5465 6114 5.131067 ACTGGAGGATTGATTGATGTGATG 58.869 41.667 0.00 0.00 0.00 3.07
5466 6115 5.384145 ACTGGAGGATTGATTGATGTGAT 57.616 39.130 0.00 0.00 0.00 3.06
5467 6116 4.849813 ACTGGAGGATTGATTGATGTGA 57.150 40.909 0.00 0.00 0.00 3.58
5468 6117 5.909621 AAACTGGAGGATTGATTGATGTG 57.090 39.130 0.00 0.00 0.00 3.21
5469 6118 6.012113 TGAAAACTGGAGGATTGATTGATGT 58.988 36.000 0.00 0.00 0.00 3.06
5470 6119 6.327934 GTGAAAACTGGAGGATTGATTGATG 58.672 40.000 0.00 0.00 0.00 3.07
5471 6120 5.420104 GGTGAAAACTGGAGGATTGATTGAT 59.580 40.000 0.00 0.00 0.00 2.57
5472 6121 4.766891 GGTGAAAACTGGAGGATTGATTGA 59.233 41.667 0.00 0.00 0.00 2.57
5473 6122 4.523943 TGGTGAAAACTGGAGGATTGATTG 59.476 41.667 0.00 0.00 0.00 2.67
5474 6123 4.739793 TGGTGAAAACTGGAGGATTGATT 58.260 39.130 0.00 0.00 0.00 2.57
5475 6124 4.387026 TGGTGAAAACTGGAGGATTGAT 57.613 40.909 0.00 0.00 0.00 2.57
5476 6125 3.874383 TGGTGAAAACTGGAGGATTGA 57.126 42.857 0.00 0.00 0.00 2.57
5477 6126 3.304659 CGTTGGTGAAAACTGGAGGATTG 60.305 47.826 0.00 0.00 0.00 2.67
5478 6127 2.884639 CGTTGGTGAAAACTGGAGGATT 59.115 45.455 0.00 0.00 0.00 3.01
5479 6128 2.105821 TCGTTGGTGAAAACTGGAGGAT 59.894 45.455 0.00 0.00 0.00 3.24
5480 6129 1.487142 TCGTTGGTGAAAACTGGAGGA 59.513 47.619 0.00 0.00 0.00 3.71
5481 6130 1.602377 GTCGTTGGTGAAAACTGGAGG 59.398 52.381 0.00 0.00 0.00 4.30
5482 6131 1.260561 CGTCGTTGGTGAAAACTGGAG 59.739 52.381 0.00 0.00 0.00 3.86
5483 6132 1.134759 TCGTCGTTGGTGAAAACTGGA 60.135 47.619 0.00 0.00 0.00 3.86
5484 6133 1.292061 TCGTCGTTGGTGAAAACTGG 58.708 50.000 0.00 0.00 0.00 4.00
5485 6134 2.538132 GGTTCGTCGTTGGTGAAAACTG 60.538 50.000 0.00 0.00 0.00 3.16
5486 6135 1.667212 GGTTCGTCGTTGGTGAAAACT 59.333 47.619 0.00 0.00 0.00 2.66
5487 6136 1.667212 AGGTTCGTCGTTGGTGAAAAC 59.333 47.619 0.00 0.00 0.00 2.43
5488 6137 2.027003 AGGTTCGTCGTTGGTGAAAA 57.973 45.000 0.00 0.00 0.00 2.29
5489 6138 1.935199 GAAGGTTCGTCGTTGGTGAAA 59.065 47.619 0.00 0.00 0.00 2.69
5490 6139 1.574134 GAAGGTTCGTCGTTGGTGAA 58.426 50.000 0.00 0.00 0.00 3.18
5491 6140 0.249573 GGAAGGTTCGTCGTTGGTGA 60.250 55.000 0.00 0.00 0.00 4.02
5492 6141 1.226030 GGGAAGGTTCGTCGTTGGTG 61.226 60.000 0.00 0.00 0.00 4.17
5493 6142 1.070275 GGGAAGGTTCGTCGTTGGT 59.930 57.895 0.00 0.00 0.00 3.67
5494 6143 0.250166 AAGGGAAGGTTCGTCGTTGG 60.250 55.000 0.00 0.00 0.00 3.77
5495 6144 2.443887 TAAGGGAAGGTTCGTCGTTG 57.556 50.000 0.00 0.00 0.00 4.10
5496 6145 2.564062 TGATAAGGGAAGGTTCGTCGTT 59.436 45.455 0.00 0.00 0.00 3.85
5497 6146 2.173519 TGATAAGGGAAGGTTCGTCGT 58.826 47.619 0.00 0.00 0.00 4.34
5498 6147 2.953466 TGATAAGGGAAGGTTCGTCG 57.047 50.000 0.00 0.00 0.00 5.12
5499 6148 4.342665 AGAGATGATAAGGGAAGGTTCGTC 59.657 45.833 0.00 0.00 0.00 4.20
5500 6149 4.290942 AGAGATGATAAGGGAAGGTTCGT 58.709 43.478 0.00 0.00 0.00 3.85
5501 6150 4.946478 AGAGATGATAAGGGAAGGTTCG 57.054 45.455 0.00 0.00 0.00 3.95
5502 6151 6.555360 TCCTTAGAGATGATAAGGGAAGGTTC 59.445 42.308 10.93 0.00 46.29 3.62
5503 6152 6.327887 GTCCTTAGAGATGATAAGGGAAGGTT 59.672 42.308 10.93 0.00 46.29 3.50
5504 6153 5.841783 GTCCTTAGAGATGATAAGGGAAGGT 59.158 44.000 10.93 0.00 46.29 3.50
5505 6154 5.247337 GGTCCTTAGAGATGATAAGGGAAGG 59.753 48.000 10.93 0.00 46.29 3.46
5506 6155 5.047660 CGGTCCTTAGAGATGATAAGGGAAG 60.048 48.000 10.93 1.19 46.29 3.46
5507 6156 4.833380 CGGTCCTTAGAGATGATAAGGGAA 59.167 45.833 10.93 0.00 46.29 3.97
5508 6157 4.408276 CGGTCCTTAGAGATGATAAGGGA 58.592 47.826 10.93 0.00 46.29 4.20
5509 6158 3.056465 GCGGTCCTTAGAGATGATAAGGG 60.056 52.174 10.93 0.00 46.29 3.95
5511 6160 4.181309 GGCGGTCCTTAGAGATGATAAG 57.819 50.000 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.