Multiple sequence alignment - TraesCS2D01G256600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G256600 chr2D 100.000 4360 0 0 629 4988 311715405 311719764 0.000000e+00 8052.0
1 TraesCS2D01G256600 chr2D 100.000 134 0 0 1 134 311714777 311714910 1.070000e-61 248.0
2 TraesCS2D01G256600 chr2D 84.571 175 22 5 3360 3531 459775576 459775748 8.590000e-38 169.0
3 TraesCS2D01G256600 chr2B 95.077 2011 57 18 629 2615 361426405 361424413 0.000000e+00 3127.0
4 TraesCS2D01G256600 chr2B 93.769 1958 60 16 2611 4508 361424386 361422431 0.000000e+00 2883.0
5 TraesCS2D01G256600 chr2B 100.000 134 0 0 1 134 361426995 361426862 1.070000e-61 248.0
6 TraesCS2D01G256600 chr2B 83.908 174 25 3 3360 3531 541009374 541009546 4.000000e-36 163.0
7 TraesCS2D01G256600 chr2A 95.007 2003 41 20 629 2607 428907897 428909864 0.000000e+00 3090.0
8 TraesCS2D01G256600 chr2A 93.939 1485 48 16 3050 4507 428910652 428912121 0.000000e+00 2206.0
9 TraesCS2D01G256600 chr2A 98.039 408 4 1 2610 3013 428909900 428910307 0.000000e+00 706.0
10 TraesCS2D01G256600 chr2A 92.908 141 3 1 1 134 428907694 428907834 1.100000e-46 198.0
11 TraesCS2D01G256600 chr1D 88.889 477 53 0 4507 4983 270049759 270050235 5.560000e-164 588.0
12 TraesCS2D01G256600 chr5D 87.967 482 57 1 4507 4987 233717866 233718347 7.250000e-158 568.0
13 TraesCS2D01G256600 chr5D 92.086 139 11 0 2649 2787 477985762 477985900 3.940000e-46 196.0
14 TraesCS2D01G256600 chr1A 86.929 482 60 2 4507 4987 300389452 300389931 5.680000e-149 538.0
15 TraesCS2D01G256600 chr5B 83.437 483 77 3 4506 4988 345456793 345456314 3.540000e-121 446.0
16 TraesCS2D01G256600 chr5B 92.086 139 11 0 2649 2787 585474920 585475058 3.940000e-46 196.0
17 TraesCS2D01G256600 chr5A 91.367 139 12 0 2649 2787 597256184 597256322 1.830000e-44 191.0
18 TraesCS2D01G256600 chr7D 82.927 82 12 2 4904 4984 505155031 505154951 6.930000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G256600 chr2D 311714777 311719764 4987 False 4150 8052 100.00000 1 4988 2 chr2D.!!$F2 4987
1 TraesCS2D01G256600 chr2B 361422431 361426995 4564 True 2086 3127 96.28200 1 4508 3 chr2B.!!$R1 4507
2 TraesCS2D01G256600 chr2A 428907694 428912121 4427 False 1550 3090 94.97325 1 4507 4 chr2A.!!$F1 4506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 850 2.866515 TCTCTCCCTCCTCCTACTTCT 58.133 52.381 0.00 0.0 0.00 2.85 F
1549 1571 1.068125 AGCAAGCATACGACGTGTACA 60.068 47.619 11.56 0.0 35.44 2.90 F
2178 2202 1.670811 CCGCATGGTGATGAACTAACC 59.329 52.381 0.00 0.0 34.38 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2088 2111 0.463295 GCTTTAGGGGTCGGTTAGGC 60.463 60.0 0.00 0.0 0.0 3.93 R
2937 3024 0.178891 ACTTTGGCAGGGAGAGGAGA 60.179 55.0 2.26 0.0 0.0 3.71 R
3992 4399 0.525668 CTACATGTCCGACCGAGTGC 60.526 60.0 0.00 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
831 848 3.203059 TCTTCTCTCCCTCCTCCTACTT 58.797 50.000 0.00 0.00 0.00 2.24
832 849 3.203487 TCTTCTCTCCCTCCTCCTACTTC 59.797 52.174 0.00 0.00 0.00 3.01
833 850 2.866515 TCTCTCCCTCCTCCTACTTCT 58.133 52.381 0.00 0.00 0.00 2.85
834 851 3.203059 TCTCTCCCTCCTCCTACTTCTT 58.797 50.000 0.00 0.00 0.00 2.52
835 852 3.203487 TCTCTCCCTCCTCCTACTTCTTC 59.797 52.174 0.00 0.00 0.00 2.87
836 853 3.203059 TCTCCCTCCTCCTACTTCTTCT 58.797 50.000 0.00 0.00 0.00 2.85
1312 1332 5.984725 ACTTCATCACCGGAAATATACACA 58.015 37.500 9.46 0.00 0.00 3.72
1313 1333 5.815740 ACTTCATCACCGGAAATATACACAC 59.184 40.000 9.46 0.00 0.00 3.82
1340 1362 1.078637 TCCGTCGACCGAGATCAGT 60.079 57.895 10.58 0.00 39.56 3.41
1549 1571 1.068125 AGCAAGCATACGACGTGTACA 60.068 47.619 11.56 0.00 35.44 2.90
1959 1982 3.001939 CGTGATTAATTAGTCGGGGCAAC 59.998 47.826 3.81 0.00 0.00 4.17
2178 2202 1.670811 CCGCATGGTGATGAACTAACC 59.329 52.381 0.00 0.00 34.38 2.85
2427 2464 6.016610 CCCGGTAATCCCTTAAATTACATGTG 60.017 42.308 9.11 0.00 40.03 3.21
2429 2466 6.262273 CGGTAATCCCTTAAATTACATGTGCT 59.738 38.462 9.11 0.00 40.03 4.40
2430 2467 7.442969 CGGTAATCCCTTAAATTACATGTGCTA 59.557 37.037 9.11 0.00 40.03 3.49
2432 2469 9.116067 GTAATCCCTTAAATTACATGTGCTACA 57.884 33.333 9.11 0.00 38.75 2.74
2433 2470 8.766994 AATCCCTTAAATTACATGTGCTACAT 57.233 30.769 9.11 0.00 39.91 2.29
2434 2471 7.801716 TCCCTTAAATTACATGTGCTACATC 57.198 36.000 9.11 0.00 36.53 3.06
2435 2472 7.573710 TCCCTTAAATTACATGTGCTACATCT 58.426 34.615 9.11 0.00 36.53 2.90
2436 2473 8.710239 TCCCTTAAATTACATGTGCTACATCTA 58.290 33.333 9.11 0.00 36.53 1.98
2437 2474 9.507329 CCCTTAAATTACATGTGCTACATCTAT 57.493 33.333 9.11 0.00 36.53 1.98
2456 2493 9.674824 ACATCTATACGTATTTACCTTTTCTCG 57.325 33.333 14.33 0.00 0.00 4.04
2493 2536 9.077885 AGTTTGATTACTGATATGGTGTTTTGT 57.922 29.630 0.00 0.00 0.00 2.83
2937 3024 2.228822 GTGTCGTTGCAGGGAAATGATT 59.771 45.455 0.00 0.00 0.00 2.57
2939 3026 2.749621 GTCGTTGCAGGGAAATGATTCT 59.250 45.455 0.00 0.00 35.79 2.40
3041 3158 7.725251 ACACAAATATCTCATTCTCTCTCTCC 58.275 38.462 0.00 0.00 0.00 3.71
3042 3159 7.564660 ACACAAATATCTCATTCTCTCTCTCCT 59.435 37.037 0.00 0.00 0.00 3.69
3043 3160 8.084073 CACAAATATCTCATTCTCTCTCTCCTC 58.916 40.741 0.00 0.00 0.00 3.71
3045 3162 3.593442 TCTCATTCTCTCTCTCCTCCC 57.407 52.381 0.00 0.00 0.00 4.30
3046 3163 3.130450 TCTCATTCTCTCTCTCCTCCCT 58.870 50.000 0.00 0.00 0.00 4.20
3048 3165 2.855599 TCATTCTCTCTCTCCTCCCTCA 59.144 50.000 0.00 0.00 0.00 3.86
3095 3492 1.107114 ATGCGTGACCGATTCTCTCT 58.893 50.000 0.00 0.00 35.63 3.10
3096 3493 0.452184 TGCGTGACCGATTCTCTCTC 59.548 55.000 0.00 0.00 35.63 3.20
3225 3622 2.184830 CGCCAGCCAGTCATCATGG 61.185 63.158 0.00 0.00 41.04 3.66
3533 3940 2.664851 CAGGCGCAACAAGGACGA 60.665 61.111 10.83 0.00 0.00 4.20
3792 4199 2.604686 AGCCTGAGCAACTCCCGA 60.605 61.111 0.00 0.00 43.56 5.14
3992 4399 0.807275 TGGAGCGACGCATGAATGAG 60.807 55.000 23.70 0.00 0.00 2.90
4005 4412 0.802607 GAATGAGCACTCGGTCGGAC 60.803 60.000 0.00 0.00 42.80 4.79
4011 4418 0.525668 GCACTCGGTCGGACATGTAG 60.526 60.000 10.76 0.00 0.00 2.74
4038 4445 3.986006 GGCGCATGCATGGGATGG 61.986 66.667 38.92 11.28 45.35 3.51
4096 4504 6.074994 CGACGTGATTAAGGATTAGCAAGTAC 60.075 42.308 0.00 0.00 32.81 2.73
4097 4505 6.047231 ACGTGATTAAGGATTAGCAAGTACC 58.953 40.000 0.00 0.00 31.69 3.34
4162 4574 3.365164 GGTATCGAGATTACTCCTGCGAC 60.365 52.174 0.00 0.00 39.76 5.19
4163 4575 2.039818 TCGAGATTACTCCTGCGACT 57.960 50.000 0.00 0.00 39.76 4.18
4207 4631 1.000771 GCCTCCCCTGTTTCCTTCC 60.001 63.158 0.00 0.00 0.00 3.46
4209 4633 1.076438 CCTCCCCTGTTTCCTTCCTT 58.924 55.000 0.00 0.00 0.00 3.36
4364 4788 2.373169 TCTTTGTTCATCAGCCTGACCT 59.627 45.455 0.00 0.00 0.00 3.85
4390 4814 5.221048 CGGTCTCACCTTTTGAAAATTGACT 60.221 40.000 0.00 0.00 35.66 3.41
4407 4831 2.495669 TGACTAAGTCATCATGGACGCA 59.504 45.455 0.00 0.00 42.62 5.24
4424 4848 4.318121 GGACGCATCACTATCGATCAAAAC 60.318 45.833 0.00 0.00 0.00 2.43
4425 4849 3.242944 ACGCATCACTATCGATCAAAACG 59.757 43.478 0.00 1.35 0.00 3.60
4431 4857 4.267690 TCACTATCGATCAAAACGTGCATC 59.732 41.667 0.00 0.00 0.00 3.91
4457 4883 9.941664 CTTACTGGTAAAAGAATAATCTGCATG 57.058 33.333 0.00 0.00 35.59 4.06
4509 4935 4.744631 CACCAAAGTGTAAAATCTGTTGGC 59.255 41.667 0.00 0.00 39.30 4.52
4510 4936 4.404073 ACCAAAGTGTAAAATCTGTTGGCA 59.596 37.500 0.00 0.00 38.04 4.92
4511 4937 5.105146 ACCAAAGTGTAAAATCTGTTGGCAA 60.105 36.000 0.00 0.00 38.04 4.52
4512 4938 5.990996 CCAAAGTGTAAAATCTGTTGGCAAT 59.009 36.000 1.92 0.00 0.00 3.56
4513 4939 6.482973 CCAAAGTGTAAAATCTGTTGGCAATT 59.517 34.615 1.92 0.00 0.00 2.32
4514 4940 7.307337 CCAAAGTGTAAAATCTGTTGGCAATTC 60.307 37.037 1.92 0.00 0.00 2.17
4515 4941 5.783111 AGTGTAAAATCTGTTGGCAATTCC 58.217 37.500 1.92 0.00 0.00 3.01
4516 4942 5.539955 AGTGTAAAATCTGTTGGCAATTCCT 59.460 36.000 1.92 0.00 35.26 3.36
4517 4943 5.863935 GTGTAAAATCTGTTGGCAATTCCTC 59.136 40.000 1.92 0.00 35.26 3.71
4518 4944 5.774690 TGTAAAATCTGTTGGCAATTCCTCT 59.225 36.000 1.92 0.00 35.26 3.69
4519 4945 5.813513 AAAATCTGTTGGCAATTCCTCTT 57.186 34.783 1.92 0.00 35.26 2.85
4520 4946 5.813513 AAATCTGTTGGCAATTCCTCTTT 57.186 34.783 1.92 0.00 35.26 2.52
4521 4947 5.397142 AATCTGTTGGCAATTCCTCTTTC 57.603 39.130 1.92 0.00 35.26 2.62
4522 4948 3.157087 TCTGTTGGCAATTCCTCTTTCC 58.843 45.455 1.92 0.00 35.26 3.13
4523 4949 2.892852 CTGTTGGCAATTCCTCTTTCCA 59.107 45.455 1.92 0.00 35.26 3.53
4524 4950 3.303938 TGTTGGCAATTCCTCTTTCCAA 58.696 40.909 1.92 0.00 35.26 3.53
4525 4951 3.903090 TGTTGGCAATTCCTCTTTCCAAT 59.097 39.130 1.92 0.00 36.20 3.16
4526 4952 4.021192 TGTTGGCAATTCCTCTTTCCAATC 60.021 41.667 1.92 0.00 36.20 2.67
4527 4953 3.099141 TGGCAATTCCTCTTTCCAATCC 58.901 45.455 0.00 0.00 35.26 3.01
4528 4954 3.245730 TGGCAATTCCTCTTTCCAATCCT 60.246 43.478 0.00 0.00 35.26 3.24
4529 4955 3.131755 GGCAATTCCTCTTTCCAATCCTG 59.868 47.826 0.00 0.00 0.00 3.86
4530 4956 3.766051 GCAATTCCTCTTTCCAATCCTGT 59.234 43.478 0.00 0.00 0.00 4.00
4531 4957 4.142293 GCAATTCCTCTTTCCAATCCTGTC 60.142 45.833 0.00 0.00 0.00 3.51
4532 4958 5.259632 CAATTCCTCTTTCCAATCCTGTCT 58.740 41.667 0.00 0.00 0.00 3.41
4533 4959 4.559862 TTCCTCTTTCCAATCCTGTCTC 57.440 45.455 0.00 0.00 0.00 3.36
4534 4960 2.497675 TCCTCTTTCCAATCCTGTCTCG 59.502 50.000 0.00 0.00 0.00 4.04
4535 4961 2.419297 CCTCTTTCCAATCCTGTCTCGG 60.419 54.545 0.00 0.00 0.00 4.63
4536 4962 2.497675 CTCTTTCCAATCCTGTCTCGGA 59.502 50.000 0.00 0.00 37.50 4.55
4537 4963 3.107601 TCTTTCCAATCCTGTCTCGGAT 58.892 45.455 0.00 0.00 45.59 4.18
4538 4964 3.133003 TCTTTCCAATCCTGTCTCGGATC 59.867 47.826 0.00 0.00 42.89 3.36
4539 4965 2.159179 TCCAATCCTGTCTCGGATCA 57.841 50.000 0.00 0.00 42.89 2.92
4540 4966 2.682594 TCCAATCCTGTCTCGGATCAT 58.317 47.619 0.00 0.00 42.89 2.45
4541 4967 3.041211 TCCAATCCTGTCTCGGATCATT 58.959 45.455 0.00 0.00 42.89 2.57
4542 4968 3.136763 CCAATCCTGTCTCGGATCATTG 58.863 50.000 0.00 0.00 42.89 2.82
4543 4969 2.540265 ATCCTGTCTCGGATCATTGC 57.460 50.000 0.00 0.00 39.60 3.56
4544 4970 0.465705 TCCTGTCTCGGATCATTGCC 59.534 55.000 0.00 0.00 0.00 4.52
4545 4971 0.533755 CCTGTCTCGGATCATTGCCC 60.534 60.000 0.00 0.00 0.00 5.36
4546 4972 0.178767 CTGTCTCGGATCATTGCCCA 59.821 55.000 0.00 0.00 0.00 5.36
4547 4973 0.839277 TGTCTCGGATCATTGCCCAT 59.161 50.000 0.00 0.00 0.00 4.00
4548 4974 2.037641 CTGTCTCGGATCATTGCCCATA 59.962 50.000 0.00 0.00 0.00 2.74
4549 4975 2.639347 TGTCTCGGATCATTGCCCATAT 59.361 45.455 0.00 0.00 0.00 1.78
4550 4976 3.005554 GTCTCGGATCATTGCCCATATG 58.994 50.000 0.00 0.00 0.00 1.78
4551 4977 2.639347 TCTCGGATCATTGCCCATATGT 59.361 45.455 1.24 0.00 0.00 2.29
4552 4978 3.005554 CTCGGATCATTGCCCATATGTC 58.994 50.000 1.24 0.00 0.00 3.06
4553 4979 2.371510 TCGGATCATTGCCCATATGTCA 59.628 45.455 1.24 0.00 0.00 3.58
4554 4980 3.009363 TCGGATCATTGCCCATATGTCAT 59.991 43.478 1.24 0.00 0.00 3.06
4555 4981 3.376234 CGGATCATTGCCCATATGTCATC 59.624 47.826 1.24 0.00 0.00 2.92
4556 4982 4.597004 GGATCATTGCCCATATGTCATCT 58.403 43.478 1.24 0.00 0.00 2.90
4557 4983 4.639310 GGATCATTGCCCATATGTCATCTC 59.361 45.833 1.24 0.00 0.00 2.75
4558 4984 4.710313 TCATTGCCCATATGTCATCTCA 57.290 40.909 1.24 0.00 0.00 3.27
4559 4985 5.051409 TCATTGCCCATATGTCATCTCAA 57.949 39.130 1.24 0.00 0.00 3.02
4560 4986 5.637127 TCATTGCCCATATGTCATCTCAAT 58.363 37.500 1.24 0.00 0.00 2.57
4561 4987 6.072649 TCATTGCCCATATGTCATCTCAATT 58.927 36.000 1.24 0.00 0.00 2.32
4562 4988 5.777850 TTGCCCATATGTCATCTCAATTG 57.222 39.130 0.00 0.00 0.00 2.32
4563 4989 4.146564 TGCCCATATGTCATCTCAATTGG 58.853 43.478 5.42 0.00 0.00 3.16
4564 4990 4.147321 GCCCATATGTCATCTCAATTGGT 58.853 43.478 5.42 0.00 0.00 3.67
4565 4991 5.163109 TGCCCATATGTCATCTCAATTGGTA 60.163 40.000 5.42 0.00 0.00 3.25
4566 4992 5.182001 GCCCATATGTCATCTCAATTGGTAC 59.818 44.000 5.42 0.00 0.00 3.34
4567 4993 6.537355 CCCATATGTCATCTCAATTGGTACT 58.463 40.000 5.42 0.00 0.00 2.73
4568 4994 7.679783 CCCATATGTCATCTCAATTGGTACTA 58.320 38.462 5.42 0.00 0.00 1.82
4569 4995 7.821359 CCCATATGTCATCTCAATTGGTACTAG 59.179 40.741 5.42 0.00 0.00 2.57
4570 4996 7.332926 CCATATGTCATCTCAATTGGTACTAGC 59.667 40.741 5.42 0.00 0.00 3.42
4571 4997 5.675684 TGTCATCTCAATTGGTACTAGCA 57.324 39.130 5.42 0.00 0.00 3.49
4572 4998 6.239217 TGTCATCTCAATTGGTACTAGCAT 57.761 37.500 5.42 0.00 0.00 3.79
4573 4999 7.360113 TGTCATCTCAATTGGTACTAGCATA 57.640 36.000 5.42 0.00 0.00 3.14
4574 5000 7.210174 TGTCATCTCAATTGGTACTAGCATAC 58.790 38.462 5.42 0.00 0.00 2.39
4575 5001 6.647067 GTCATCTCAATTGGTACTAGCATACC 59.353 42.308 5.42 3.13 44.39 2.73
4582 5008 3.553828 GGTACTAGCATACCAAAGGCA 57.446 47.619 4.96 0.00 43.69 4.75
4583 5009 3.203716 GGTACTAGCATACCAAAGGCAC 58.796 50.000 4.96 0.00 43.69 5.01
4584 5010 3.370103 GGTACTAGCATACCAAAGGCACA 60.370 47.826 4.96 0.00 43.69 4.57
4585 5011 3.433306 ACTAGCATACCAAAGGCACAA 57.567 42.857 0.00 0.00 0.00 3.33
4586 5012 3.347216 ACTAGCATACCAAAGGCACAAG 58.653 45.455 0.00 0.00 0.00 3.16
4587 5013 2.292828 AGCATACCAAAGGCACAAGT 57.707 45.000 0.00 0.00 0.00 3.16
4588 5014 2.597455 AGCATACCAAAGGCACAAGTT 58.403 42.857 0.00 0.00 0.00 2.66
4589 5015 2.965147 AGCATACCAAAGGCACAAGTTT 59.035 40.909 0.00 0.00 0.00 2.66
4590 5016 3.387699 AGCATACCAAAGGCACAAGTTTT 59.612 39.130 0.00 0.00 0.00 2.43
4591 5017 4.126437 GCATACCAAAGGCACAAGTTTTT 58.874 39.130 0.00 0.00 0.00 1.94
4592 5018 5.069781 AGCATACCAAAGGCACAAGTTTTTA 59.930 36.000 0.00 0.00 0.00 1.52
4593 5019 5.405269 GCATACCAAAGGCACAAGTTTTTAG 59.595 40.000 0.00 0.00 0.00 1.85
4594 5020 6.737346 GCATACCAAAGGCACAAGTTTTTAGA 60.737 38.462 0.00 0.00 0.00 2.10
4595 5021 5.869649 ACCAAAGGCACAAGTTTTTAGAT 57.130 34.783 0.00 0.00 0.00 1.98
4596 5022 6.233905 ACCAAAGGCACAAGTTTTTAGATT 57.766 33.333 0.00 0.00 0.00 2.40
4597 5023 6.649155 ACCAAAGGCACAAGTTTTTAGATTT 58.351 32.000 0.00 0.00 0.00 2.17
4598 5024 6.538381 ACCAAAGGCACAAGTTTTTAGATTTG 59.462 34.615 0.00 0.00 0.00 2.32
4599 5025 6.760770 CCAAAGGCACAAGTTTTTAGATTTGA 59.239 34.615 0.00 0.00 0.00 2.69
4600 5026 7.279758 CCAAAGGCACAAGTTTTTAGATTTGAA 59.720 33.333 0.00 0.00 0.00 2.69
4601 5027 8.663911 CAAAGGCACAAGTTTTTAGATTTGAAA 58.336 29.630 0.00 0.00 0.00 2.69
4602 5028 8.785329 AAGGCACAAGTTTTTAGATTTGAAAA 57.215 26.923 0.00 0.00 0.00 2.29
4603 5029 8.196802 AGGCACAAGTTTTTAGATTTGAAAAC 57.803 30.769 7.95 7.95 42.92 2.43
4616 5042 7.482654 AGATTTGAAAACTTTTGGCTTAAGC 57.517 32.000 19.53 19.53 41.14 3.09
4617 5043 7.047271 AGATTTGAAAACTTTTGGCTTAAGCA 58.953 30.769 27.83 12.09 44.36 3.91
4618 5044 7.716560 AGATTTGAAAACTTTTGGCTTAAGCAT 59.283 29.630 27.83 8.20 44.36 3.79
4619 5045 6.843069 TTGAAAACTTTTGGCTTAAGCATC 57.157 33.333 27.83 12.80 44.36 3.91
4620 5046 5.911752 TGAAAACTTTTGGCTTAAGCATCA 58.088 33.333 27.83 15.29 44.36 3.07
4621 5047 6.523840 TGAAAACTTTTGGCTTAAGCATCAT 58.476 32.000 27.83 6.12 44.36 2.45
4622 5048 7.665690 TGAAAACTTTTGGCTTAAGCATCATA 58.334 30.769 27.83 10.69 44.36 2.15
4623 5049 8.147058 TGAAAACTTTTGGCTTAAGCATCATAA 58.853 29.630 27.83 16.64 44.36 1.90
4624 5050 9.154847 GAAAACTTTTGGCTTAAGCATCATAAT 57.845 29.630 27.83 7.16 44.36 1.28
4625 5051 9.506018 AAAACTTTTGGCTTAAGCATCATAATT 57.494 25.926 27.83 12.45 44.36 1.40
4626 5052 9.506018 AAACTTTTGGCTTAAGCATCATAATTT 57.494 25.926 27.83 15.80 44.36 1.82
4627 5053 8.707938 ACTTTTGGCTTAAGCATCATAATTTC 57.292 30.769 27.83 7.82 44.36 2.17
4628 5054 8.313292 ACTTTTGGCTTAAGCATCATAATTTCA 58.687 29.630 27.83 10.31 44.36 2.69
4629 5055 9.153721 CTTTTGGCTTAAGCATCATAATTTCAA 57.846 29.630 27.83 15.30 44.36 2.69
4630 5056 9.499479 TTTTGGCTTAAGCATCATAATTTCAAA 57.501 25.926 27.83 19.55 44.36 2.69
4631 5057 8.706492 TTGGCTTAAGCATCATAATTTCAAAG 57.294 30.769 27.83 0.00 44.36 2.77
4632 5058 8.065473 TGGCTTAAGCATCATAATTTCAAAGA 57.935 30.769 27.83 0.00 44.36 2.52
4633 5059 8.192774 TGGCTTAAGCATCATAATTTCAAAGAG 58.807 33.333 27.83 0.00 44.36 2.85
4634 5060 8.408601 GGCTTAAGCATCATAATTTCAAAGAGA 58.591 33.333 27.83 0.00 44.36 3.10
4635 5061 9.230932 GCTTAAGCATCATAATTTCAAAGAGAC 57.769 33.333 22.59 0.00 41.59 3.36
4638 5064 7.934855 AGCATCATAATTTCAAAGAGACAGT 57.065 32.000 0.00 0.00 0.00 3.55
4639 5065 8.345724 AGCATCATAATTTCAAAGAGACAGTT 57.654 30.769 0.00 0.00 0.00 3.16
4640 5066 8.457261 AGCATCATAATTTCAAAGAGACAGTTC 58.543 33.333 0.00 0.00 0.00 3.01
4641 5067 8.239314 GCATCATAATTTCAAAGAGACAGTTCA 58.761 33.333 0.00 0.00 0.00 3.18
4644 5070 8.292448 TCATAATTTCAAAGAGACAGTTCAAGC 58.708 33.333 0.00 0.00 0.00 4.01
4645 5071 6.705863 AATTTCAAAGAGACAGTTCAAGCT 57.294 33.333 0.00 0.00 0.00 3.74
4646 5072 7.807977 AATTTCAAAGAGACAGTTCAAGCTA 57.192 32.000 0.00 0.00 0.00 3.32
4647 5073 7.807977 ATTTCAAAGAGACAGTTCAAGCTAA 57.192 32.000 0.00 0.00 0.00 3.09
4648 5074 7.807977 TTTCAAAGAGACAGTTCAAGCTAAT 57.192 32.000 0.00 0.00 0.00 1.73
4649 5075 7.807977 TTCAAAGAGACAGTTCAAGCTAATT 57.192 32.000 0.00 0.00 0.00 1.40
4650 5076 7.194607 TCAAAGAGACAGTTCAAGCTAATTG 57.805 36.000 0.00 0.00 40.52 2.32
4651 5077 6.205464 TCAAAGAGACAGTTCAAGCTAATTGG 59.795 38.462 0.00 0.00 39.54 3.16
4652 5078 4.006319 AGAGACAGTTCAAGCTAATTGGC 58.994 43.478 5.52 5.52 39.54 4.52
4653 5079 3.753272 GAGACAGTTCAAGCTAATTGGCA 59.247 43.478 16.72 0.00 39.54 4.92
4654 5080 4.144297 AGACAGTTCAAGCTAATTGGCAA 58.856 39.130 16.72 0.68 39.54 4.52
4655 5081 4.022849 AGACAGTTCAAGCTAATTGGCAAC 60.023 41.667 16.72 11.37 39.54 4.17
4668 5094 1.885871 GGCAACAACCTCTGATGGC 59.114 57.895 0.00 0.00 44.34 4.40
4669 5095 2.644887 GCAACAACCTCTGATGGCA 58.355 52.632 0.00 0.00 0.00 4.92
4670 5096 0.961019 GCAACAACCTCTGATGGCAA 59.039 50.000 0.00 0.00 0.00 4.52
4671 5097 1.068055 GCAACAACCTCTGATGGCAAG 60.068 52.381 0.00 0.00 0.00 4.01
4672 5098 2.233271 CAACAACCTCTGATGGCAAGT 58.767 47.619 0.00 0.00 0.00 3.16
4673 5099 1.901591 ACAACCTCTGATGGCAAGTG 58.098 50.000 0.00 0.00 0.00 3.16
4674 5100 1.421268 ACAACCTCTGATGGCAAGTGA 59.579 47.619 0.00 0.00 0.00 3.41
4675 5101 1.808945 CAACCTCTGATGGCAAGTGAC 59.191 52.381 0.00 0.00 0.00 3.67
4676 5102 1.059098 ACCTCTGATGGCAAGTGACA 58.941 50.000 0.00 0.00 37.54 3.58
4677 5103 1.002888 ACCTCTGATGGCAAGTGACAG 59.997 52.381 0.00 0.00 35.91 3.51
4678 5104 1.002888 CCTCTGATGGCAAGTGACAGT 59.997 52.381 0.00 0.00 35.91 3.55
4679 5105 2.074576 CTCTGATGGCAAGTGACAGTG 58.925 52.381 0.00 0.00 35.91 3.66
4680 5106 0.520404 CTGATGGCAAGTGACAGTGC 59.480 55.000 0.00 3.00 35.91 4.40
4681 5107 0.109153 TGATGGCAAGTGACAGTGCT 59.891 50.000 10.45 0.00 40.70 4.40
4682 5108 1.347378 TGATGGCAAGTGACAGTGCTA 59.653 47.619 10.45 5.65 40.70 3.49
4683 5109 2.224499 TGATGGCAAGTGACAGTGCTAA 60.224 45.455 10.45 1.68 40.70 3.09
4684 5110 2.340210 TGGCAAGTGACAGTGCTAAA 57.660 45.000 10.45 0.00 40.70 1.85
4685 5111 2.862541 TGGCAAGTGACAGTGCTAAAT 58.137 42.857 10.45 0.00 40.70 1.40
4686 5112 3.221771 TGGCAAGTGACAGTGCTAAATT 58.778 40.909 10.45 0.00 40.70 1.82
4687 5113 3.004629 TGGCAAGTGACAGTGCTAAATTG 59.995 43.478 10.45 0.00 40.70 2.32
4688 5114 3.253188 GGCAAGTGACAGTGCTAAATTGA 59.747 43.478 10.45 0.00 40.70 2.57
4689 5115 4.082571 GGCAAGTGACAGTGCTAAATTGAT 60.083 41.667 10.45 0.00 40.70 2.57
4690 5116 5.091431 GCAAGTGACAGTGCTAAATTGATC 58.909 41.667 4.28 0.00 37.78 2.92
4691 5117 5.335113 GCAAGTGACAGTGCTAAATTGATCA 60.335 40.000 4.28 0.00 37.78 2.92
4692 5118 5.869753 AGTGACAGTGCTAAATTGATCAC 57.130 39.130 0.00 0.00 36.34 3.06
4693 5119 5.555017 AGTGACAGTGCTAAATTGATCACT 58.445 37.500 0.00 0.00 40.44 3.41
4696 5122 4.959596 CAGTGCTAAATTGATCACTGCT 57.040 40.909 12.72 0.00 46.30 4.24
4698 5124 6.426980 CAGTGCTAAATTGATCACTGCTAA 57.573 37.500 12.72 0.00 46.30 3.09
4699 5125 6.484540 CAGTGCTAAATTGATCACTGCTAAG 58.515 40.000 12.72 0.00 46.30 2.18
4700 5126 6.093219 CAGTGCTAAATTGATCACTGCTAAGT 59.907 38.462 12.72 0.00 46.30 2.24
4701 5127 6.656693 AGTGCTAAATTGATCACTGCTAAGTT 59.343 34.615 0.00 0.00 38.25 2.66
4702 5128 7.175641 AGTGCTAAATTGATCACTGCTAAGTTT 59.824 33.333 0.00 0.00 38.25 2.66
4703 5129 8.450964 GTGCTAAATTGATCACTGCTAAGTTTA 58.549 33.333 0.00 0.00 32.98 2.01
4704 5130 9.008965 TGCTAAATTGATCACTGCTAAGTTTAA 57.991 29.630 0.00 0.00 32.98 1.52
4705 5131 9.840427 GCTAAATTGATCACTGCTAAGTTTAAA 57.160 29.630 0.00 0.00 32.98 1.52
4709 5135 8.693542 ATTGATCACTGCTAAGTTTAAAATGC 57.306 30.769 0.00 0.00 32.98 3.56
4710 5136 7.452880 TGATCACTGCTAAGTTTAAAATGCT 57.547 32.000 0.00 0.00 32.98 3.79
4711 5137 7.530010 TGATCACTGCTAAGTTTAAAATGCTC 58.470 34.615 0.00 0.00 32.98 4.26
4712 5138 6.875948 TCACTGCTAAGTTTAAAATGCTCA 57.124 33.333 0.00 0.00 32.98 4.26
4713 5139 6.902341 TCACTGCTAAGTTTAAAATGCTCAG 58.098 36.000 8.68 8.68 32.98 3.35
4714 5140 6.710295 TCACTGCTAAGTTTAAAATGCTCAGA 59.290 34.615 14.14 2.52 32.98 3.27
4715 5141 7.228507 TCACTGCTAAGTTTAAAATGCTCAGAA 59.771 33.333 14.14 4.16 32.98 3.02
4716 5142 7.862372 CACTGCTAAGTTTAAAATGCTCAGAAA 59.138 33.333 14.14 0.00 32.98 2.52
4717 5143 8.413229 ACTGCTAAGTTTAAAATGCTCAGAAAA 58.587 29.630 14.14 0.00 30.14 2.29
4718 5144 8.801715 TGCTAAGTTTAAAATGCTCAGAAAAG 57.198 30.769 0.00 0.00 0.00 2.27
4719 5145 7.867403 TGCTAAGTTTAAAATGCTCAGAAAAGG 59.133 33.333 0.00 0.00 0.00 3.11
4720 5146 7.148738 GCTAAGTTTAAAATGCTCAGAAAAGGC 60.149 37.037 0.00 0.00 0.00 4.35
4721 5147 5.541845 AGTTTAAAATGCTCAGAAAAGGCC 58.458 37.500 0.00 0.00 0.00 5.19
4722 5148 5.305386 AGTTTAAAATGCTCAGAAAAGGCCT 59.695 36.000 0.00 0.00 0.00 5.19
4723 5149 6.493458 AGTTTAAAATGCTCAGAAAAGGCCTA 59.507 34.615 5.16 0.00 0.00 3.93
4724 5150 6.909550 TTAAAATGCTCAGAAAAGGCCTAA 57.090 33.333 5.16 0.00 0.00 2.69
4725 5151 5.806654 AAAATGCTCAGAAAAGGCCTAAA 57.193 34.783 5.16 0.00 0.00 1.85
4726 5152 5.806654 AAATGCTCAGAAAAGGCCTAAAA 57.193 34.783 5.16 0.00 0.00 1.52
4727 5153 5.806654 AATGCTCAGAAAAGGCCTAAAAA 57.193 34.783 5.16 0.00 0.00 1.94
4728 5154 6.364568 AATGCTCAGAAAAGGCCTAAAAAT 57.635 33.333 5.16 0.00 0.00 1.82
4729 5155 5.806654 TGCTCAGAAAAGGCCTAAAAATT 57.193 34.783 5.16 0.00 0.00 1.82
4730 5156 6.173427 TGCTCAGAAAAGGCCTAAAAATTT 57.827 33.333 5.16 1.32 0.00 1.82
4731 5157 5.990996 TGCTCAGAAAAGGCCTAAAAATTTG 59.009 36.000 5.16 0.00 0.00 2.32
4732 5158 5.409520 GCTCAGAAAAGGCCTAAAAATTTGG 59.590 40.000 5.16 0.00 0.00 3.28
4733 5159 6.739331 TCAGAAAAGGCCTAAAAATTTGGA 57.261 33.333 5.16 0.00 0.00 3.53
4734 5160 6.758254 TCAGAAAAGGCCTAAAAATTTGGAG 58.242 36.000 5.16 0.00 0.00 3.86
4735 5161 5.409520 CAGAAAAGGCCTAAAAATTTGGAGC 59.590 40.000 5.16 0.00 0.00 4.70
4736 5162 4.972751 AAAGGCCTAAAAATTTGGAGCA 57.027 36.364 5.16 0.00 0.00 4.26
4737 5163 4.972751 AAGGCCTAAAAATTTGGAGCAA 57.027 36.364 5.16 0.00 0.00 3.91
4738 5164 4.541973 AGGCCTAAAAATTTGGAGCAAG 57.458 40.909 1.29 0.00 0.00 4.01
4739 5165 4.159557 AGGCCTAAAAATTTGGAGCAAGA 58.840 39.130 1.29 0.00 0.00 3.02
4740 5166 4.592778 AGGCCTAAAAATTTGGAGCAAGAA 59.407 37.500 1.29 0.00 0.00 2.52
4741 5167 4.690748 GGCCTAAAAATTTGGAGCAAGAAC 59.309 41.667 0.00 0.00 0.00 3.01
4742 5168 5.296748 GCCTAAAAATTTGGAGCAAGAACA 58.703 37.500 0.00 0.00 0.00 3.18
4743 5169 5.934043 GCCTAAAAATTTGGAGCAAGAACAT 59.066 36.000 0.00 0.00 0.00 2.71
4744 5170 6.427853 GCCTAAAAATTTGGAGCAAGAACATT 59.572 34.615 0.00 0.00 0.00 2.71
4745 5171 7.041167 GCCTAAAAATTTGGAGCAAGAACATTT 60.041 33.333 0.00 0.00 0.00 2.32
4746 5172 8.498358 CCTAAAAATTTGGAGCAAGAACATTTC 58.502 33.333 0.00 0.00 0.00 2.17
4747 5173 7.862512 AAAAATTTGGAGCAAGAACATTTCA 57.137 28.000 0.00 0.00 0.00 2.69
4748 5174 7.862512 AAAATTTGGAGCAAGAACATTTCAA 57.137 28.000 0.00 0.00 0.00 2.69
4749 5175 7.862512 AAATTTGGAGCAAGAACATTTCAAA 57.137 28.000 0.00 0.00 0.00 2.69
4750 5176 8.454570 AAATTTGGAGCAAGAACATTTCAAAT 57.545 26.923 0.00 0.00 35.81 2.32
4751 5177 8.454570 AATTTGGAGCAAGAACATTTCAAATT 57.545 26.923 0.00 0.00 38.16 1.82
4752 5178 7.862512 TTTGGAGCAAGAACATTTCAAATTT 57.137 28.000 0.00 0.00 0.00 1.82
4753 5179 8.954950 TTTGGAGCAAGAACATTTCAAATTTA 57.045 26.923 0.00 0.00 0.00 1.40
4754 5180 8.592105 TTGGAGCAAGAACATTTCAAATTTAG 57.408 30.769 0.00 0.00 0.00 1.85
4755 5181 6.646240 TGGAGCAAGAACATTTCAAATTTAGC 59.354 34.615 0.00 0.00 0.00 3.09
4756 5182 6.870439 GGAGCAAGAACATTTCAAATTTAGCT 59.130 34.615 0.00 0.00 0.00 3.32
4757 5183 7.148689 GGAGCAAGAACATTTCAAATTTAGCTG 60.149 37.037 0.00 0.00 0.00 4.24
4758 5184 6.647895 AGCAAGAACATTTCAAATTTAGCTGG 59.352 34.615 0.00 0.00 0.00 4.85
4759 5185 6.619232 GCAAGAACATTTCAAATTTAGCTGGC 60.619 38.462 0.00 0.00 0.00 4.85
4760 5186 6.100404 AGAACATTTCAAATTTAGCTGGCA 57.900 33.333 0.00 0.00 0.00 4.92
4761 5187 6.161381 AGAACATTTCAAATTTAGCTGGCAG 58.839 36.000 10.94 10.94 0.00 4.85
4762 5188 4.248058 ACATTTCAAATTTAGCTGGCAGC 58.752 39.130 31.56 31.56 42.84 5.25
4763 5189 4.247258 CATTTCAAATTTAGCTGGCAGCA 58.753 39.130 38.09 22.58 45.56 4.41
4764 5190 4.540359 TTTCAAATTTAGCTGGCAGCAT 57.460 36.364 38.09 25.31 45.56 3.79
4765 5191 4.540359 TTCAAATTTAGCTGGCAGCATT 57.460 36.364 38.09 26.20 45.56 3.56
4766 5192 4.114058 TCAAATTTAGCTGGCAGCATTC 57.886 40.909 38.09 11.98 45.56 2.67
4767 5193 3.510753 TCAAATTTAGCTGGCAGCATTCA 59.489 39.130 38.09 20.68 45.56 2.57
4768 5194 3.795623 AATTTAGCTGGCAGCATTCAG 57.204 42.857 38.09 2.37 45.56 3.02
4769 5195 1.466856 TTTAGCTGGCAGCATTCAGG 58.533 50.000 38.09 1.54 45.56 3.86
4770 5196 1.033746 TTAGCTGGCAGCATTCAGGC 61.034 55.000 38.09 12.63 45.56 4.85
4771 5197 2.200923 TAGCTGGCAGCATTCAGGCA 62.201 55.000 38.09 11.78 45.56 4.75
4772 5198 2.642254 GCTGGCAGCATTCAGGCAA 61.642 57.895 33.33 0.00 41.89 4.52
4773 5199 1.214589 CTGGCAGCATTCAGGCAAC 59.785 57.895 0.00 0.00 39.95 4.17
4774 5200 2.221906 CTGGCAGCATTCAGGCAACC 62.222 60.000 0.00 0.00 39.95 3.77
4775 5201 2.277591 GGCAGCATTCAGGCAACCA 61.278 57.895 0.00 0.00 35.83 3.67
4776 5202 1.667151 GCAGCATTCAGGCAACCAA 59.333 52.632 0.00 0.00 35.83 3.67
4777 5203 0.668401 GCAGCATTCAGGCAACCAAC 60.668 55.000 0.00 0.00 35.83 3.77
4778 5204 0.675083 CAGCATTCAGGCAACCAACA 59.325 50.000 0.00 0.00 35.83 3.33
4779 5205 1.068895 CAGCATTCAGGCAACCAACAA 59.931 47.619 0.00 0.00 35.83 2.83
4780 5206 1.972795 AGCATTCAGGCAACCAACAAT 59.027 42.857 0.00 0.00 35.83 2.71
4781 5207 2.070783 GCATTCAGGCAACCAACAATG 58.929 47.619 0.00 0.00 37.17 2.82
4782 5208 2.548493 GCATTCAGGCAACCAACAATGT 60.548 45.455 0.00 0.00 37.17 2.71
4783 5209 3.731089 CATTCAGGCAACCAACAATGTT 58.269 40.909 0.00 0.00 37.17 2.71
4784 5210 4.798924 GCATTCAGGCAACCAACAATGTTA 60.799 41.667 0.00 0.00 37.17 2.41
4785 5211 5.481105 CATTCAGGCAACCAACAATGTTAT 58.519 37.500 0.00 0.00 37.17 1.89
4786 5212 6.629128 CATTCAGGCAACCAACAATGTTATA 58.371 36.000 0.00 0.00 37.17 0.98
4787 5213 6.849085 TTCAGGCAACCAACAATGTTATAT 57.151 33.333 0.00 0.00 37.17 0.86
4788 5214 6.849085 TCAGGCAACCAACAATGTTATATT 57.151 33.333 0.00 0.00 37.17 1.28
4789 5215 6.629128 TCAGGCAACCAACAATGTTATATTG 58.371 36.000 0.00 5.21 34.02 1.90
4790 5216 6.435591 TCAGGCAACCAACAATGTTATATTGA 59.564 34.615 15.76 5.51 32.72 2.57
4791 5217 7.123997 TCAGGCAACCAACAATGTTATATTGAT 59.876 33.333 15.76 0.00 32.72 2.57
4792 5218 7.223193 CAGGCAACCAACAATGTTATATTGATG 59.777 37.037 15.76 6.81 33.40 3.07
4793 5219 7.041107 GGCAACCAACAATGTTATATTGATGT 58.959 34.615 15.76 0.43 32.23 3.06
4794 5220 7.010367 GGCAACCAACAATGTTATATTGATGTG 59.990 37.037 15.76 4.08 32.23 3.21
4795 5221 7.010367 GCAACCAACAATGTTATATTGATGTGG 59.990 37.037 15.76 13.06 36.28 4.17
4796 5222 7.111247 ACCAACAATGTTATATTGATGTGGG 57.889 36.000 18.83 6.50 37.78 4.61
4797 5223 6.667414 ACCAACAATGTTATATTGATGTGGGT 59.333 34.615 18.83 6.97 39.65 4.51
4798 5224 7.147915 ACCAACAATGTTATATTGATGTGGGTC 60.148 37.037 18.83 0.00 40.25 4.46
4799 5225 6.959639 ACAATGTTATATTGATGTGGGTCC 57.040 37.500 8.63 0.00 33.51 4.46
4800 5226 6.430864 ACAATGTTATATTGATGTGGGTCCA 58.569 36.000 8.63 0.00 33.51 4.02
4801 5227 6.321181 ACAATGTTATATTGATGTGGGTCCAC 59.679 38.462 12.89 12.89 38.61 4.02
4802 5228 5.708736 TGTTATATTGATGTGGGTCCACT 57.291 39.130 19.44 6.73 46.30 4.00
4803 5229 6.073447 TGTTATATTGATGTGGGTCCACTT 57.927 37.500 19.44 13.90 46.30 3.16
4804 5230 6.489603 TGTTATATTGATGTGGGTCCACTTT 58.510 36.000 19.44 8.45 46.30 2.66
4805 5231 6.376864 TGTTATATTGATGTGGGTCCACTTTG 59.623 38.462 19.44 0.00 46.30 2.77
4806 5232 3.524095 ATTGATGTGGGTCCACTTTGA 57.476 42.857 19.44 7.84 46.30 2.69
4807 5233 2.566833 TGATGTGGGTCCACTTTGAG 57.433 50.000 19.44 0.00 46.30 3.02
4808 5234 1.073763 TGATGTGGGTCCACTTTGAGG 59.926 52.381 19.44 0.00 46.30 3.86
4809 5235 1.351017 GATGTGGGTCCACTTTGAGGA 59.649 52.381 19.44 0.00 46.30 3.71
4810 5236 1.217916 TGTGGGTCCACTTTGAGGAA 58.782 50.000 19.44 0.00 46.30 3.36
4811 5237 1.780309 TGTGGGTCCACTTTGAGGAAT 59.220 47.619 19.44 0.00 46.30 3.01
4812 5238 2.983192 TGTGGGTCCACTTTGAGGAATA 59.017 45.455 19.44 0.00 46.30 1.75
4813 5239 3.591527 TGTGGGTCCACTTTGAGGAATAT 59.408 43.478 19.44 0.00 46.30 1.28
4814 5240 4.785914 TGTGGGTCCACTTTGAGGAATATA 59.214 41.667 19.44 0.00 46.30 0.86
4815 5241 5.104527 TGTGGGTCCACTTTGAGGAATATAG 60.105 44.000 19.44 0.00 46.30 1.31
4816 5242 5.130477 GTGGGTCCACTTTGAGGAATATAGA 59.870 44.000 12.54 0.00 43.12 1.98
4817 5243 5.130477 TGGGTCCACTTTGAGGAATATAGAC 59.870 44.000 0.00 0.00 36.80 2.59
4818 5244 5.367060 GGGTCCACTTTGAGGAATATAGACT 59.633 44.000 0.00 0.00 36.80 3.24
4819 5245 6.284459 GGTCCACTTTGAGGAATATAGACTG 58.716 44.000 0.00 0.00 36.80 3.51
4820 5246 5.755861 GTCCACTTTGAGGAATATAGACTGC 59.244 44.000 0.00 0.00 36.80 4.40
4821 5247 5.663106 TCCACTTTGAGGAATATAGACTGCT 59.337 40.000 0.00 0.00 30.71 4.24
4822 5248 5.988561 CCACTTTGAGGAATATAGACTGCTC 59.011 44.000 0.00 0.00 0.00 4.26
4823 5249 6.407412 CCACTTTGAGGAATATAGACTGCTCA 60.407 42.308 0.00 0.00 38.13 4.26
4824 5250 7.044181 CACTTTGAGGAATATAGACTGCTCAA 58.956 38.462 0.00 0.00 44.97 3.02
4825 5251 7.714377 CACTTTGAGGAATATAGACTGCTCAAT 59.286 37.037 3.61 0.00 45.63 2.57
4826 5252 7.714377 ACTTTGAGGAATATAGACTGCTCAATG 59.286 37.037 12.23 12.23 45.63 2.82
4827 5253 6.983906 TGAGGAATATAGACTGCTCAATGA 57.016 37.500 0.00 0.00 37.12 2.57
4828 5254 6.753180 TGAGGAATATAGACTGCTCAATGAC 58.247 40.000 0.00 0.00 37.12 3.06
4829 5255 6.324770 TGAGGAATATAGACTGCTCAATGACA 59.675 38.462 0.00 0.00 37.12 3.58
4830 5256 6.757237 AGGAATATAGACTGCTCAATGACAG 58.243 40.000 9.98 9.98 39.86 3.51
4832 5258 6.423302 GGAATATAGACTGCTCAATGACAGTG 59.577 42.308 18.26 0.00 46.82 3.66
4833 5259 6.721704 ATATAGACTGCTCAATGACAGTGA 57.278 37.500 18.26 5.36 46.82 3.41
4834 5260 3.758755 AGACTGCTCAATGACAGTGAA 57.241 42.857 18.26 0.00 46.82 3.18
4835 5261 3.397482 AGACTGCTCAATGACAGTGAAC 58.603 45.455 18.26 3.15 46.82 3.18
4836 5262 3.133691 GACTGCTCAATGACAGTGAACA 58.866 45.455 18.26 7.87 46.82 3.18
4837 5263 2.874701 ACTGCTCAATGACAGTGAACAC 59.125 45.455 14.46 0.72 45.19 3.32
4838 5264 2.874086 CTGCTCAATGACAGTGAACACA 59.126 45.455 7.07 5.14 0.00 3.72
4839 5265 3.277715 TGCTCAATGACAGTGAACACAA 58.722 40.909 7.07 0.00 0.00 3.33
4840 5266 3.884693 TGCTCAATGACAGTGAACACAAT 59.115 39.130 7.07 0.00 0.00 2.71
4841 5267 5.062528 TGCTCAATGACAGTGAACACAATA 58.937 37.500 7.07 0.00 0.00 1.90
4842 5268 5.179929 TGCTCAATGACAGTGAACACAATAG 59.820 40.000 7.07 0.00 0.00 1.73
4843 5269 5.611796 TCAATGACAGTGAACACAATAGC 57.388 39.130 2.50 0.00 0.00 2.97
4844 5270 5.062528 TCAATGACAGTGAACACAATAGCA 58.937 37.500 2.50 0.00 0.00 3.49
4845 5271 5.179929 TCAATGACAGTGAACACAATAGCAG 59.820 40.000 2.50 0.00 0.00 4.24
4846 5272 4.335400 TGACAGTGAACACAATAGCAGA 57.665 40.909 7.68 0.00 0.00 4.26
4847 5273 4.309933 TGACAGTGAACACAATAGCAGAG 58.690 43.478 7.68 0.00 0.00 3.35
4848 5274 4.039124 TGACAGTGAACACAATAGCAGAGA 59.961 41.667 7.68 0.00 0.00 3.10
4849 5275 4.960938 ACAGTGAACACAATAGCAGAGAA 58.039 39.130 7.68 0.00 0.00 2.87
4850 5276 5.368145 ACAGTGAACACAATAGCAGAGAAA 58.632 37.500 7.68 0.00 0.00 2.52
4851 5277 6.000219 ACAGTGAACACAATAGCAGAGAAAT 59.000 36.000 7.68 0.00 0.00 2.17
4852 5278 6.072838 ACAGTGAACACAATAGCAGAGAAATG 60.073 38.462 7.68 0.00 0.00 2.32
4853 5279 5.091431 GTGAACACAATAGCAGAGAAATGC 58.909 41.667 0.00 0.00 46.88 3.56
4862 5288 3.484334 GCAGAGAAATGCTCAAGGAAC 57.516 47.619 0.00 0.00 46.45 3.62
4863 5289 2.816087 GCAGAGAAATGCTCAAGGAACA 59.184 45.455 0.00 0.00 46.45 3.18
4864 5290 3.442977 GCAGAGAAATGCTCAAGGAACAT 59.557 43.478 0.00 0.00 46.45 2.71
4865 5291 4.637534 GCAGAGAAATGCTCAAGGAACATA 59.362 41.667 0.00 0.00 46.45 2.29
4866 5292 5.298777 GCAGAGAAATGCTCAAGGAACATAT 59.701 40.000 0.00 0.00 46.45 1.78
4867 5293 6.726230 CAGAGAAATGCTCAAGGAACATATG 58.274 40.000 0.00 0.00 46.45 1.78
4868 5294 6.318144 CAGAGAAATGCTCAAGGAACATATGT 59.682 38.462 1.41 1.41 46.45 2.29
4869 5295 6.888632 AGAGAAATGCTCAAGGAACATATGTT 59.111 34.615 20.93 20.93 46.45 2.71
4870 5296 8.049117 AGAGAAATGCTCAAGGAACATATGTTA 58.951 33.333 20.83 4.54 46.45 2.41
4871 5297 8.579850 AGAAATGCTCAAGGAACATATGTTAA 57.420 30.769 20.83 4.40 38.56 2.01
4872 5298 9.023962 AGAAATGCTCAAGGAACATATGTTAAA 57.976 29.630 20.83 4.72 38.56 1.52
4873 5299 9.638239 GAAATGCTCAAGGAACATATGTTAAAA 57.362 29.630 20.83 5.04 38.56 1.52
4874 5300 8.986477 AATGCTCAAGGAACATATGTTAAAAC 57.014 30.769 20.83 11.50 38.56 2.43
4875 5301 7.759489 TGCTCAAGGAACATATGTTAAAACT 57.241 32.000 20.83 13.38 38.56 2.66
4876 5302 8.177119 TGCTCAAGGAACATATGTTAAAACTT 57.823 30.769 20.83 17.69 38.56 2.66
4877 5303 8.296713 TGCTCAAGGAACATATGTTAAAACTTC 58.703 33.333 20.83 6.97 38.56 3.01
4878 5304 8.515414 GCTCAAGGAACATATGTTAAAACTTCT 58.485 33.333 20.83 0.00 38.56 2.85
4891 5317 8.202461 TGTTAAAACTTCTATCCTTCCAGAGA 57.798 34.615 0.00 0.00 0.00 3.10
4892 5318 8.656806 TGTTAAAACTTCTATCCTTCCAGAGAA 58.343 33.333 0.00 0.00 0.00 2.87
4893 5319 9.674068 GTTAAAACTTCTATCCTTCCAGAGAAT 57.326 33.333 0.00 0.00 0.00 2.40
4894 5320 9.892130 TTAAAACTTCTATCCTTCCAGAGAATC 57.108 33.333 0.00 0.00 0.00 2.52
4910 5336 5.619625 GAGAATCTGTTGAAGACAAAGGG 57.380 43.478 0.00 0.00 37.88 3.95
4911 5337 3.823304 AGAATCTGTTGAAGACAAAGGGC 59.177 43.478 0.00 0.00 37.88 5.19
4912 5338 2.727123 TCTGTTGAAGACAAAGGGCA 57.273 45.000 0.00 0.00 37.93 5.36
4913 5339 3.011566 TCTGTTGAAGACAAAGGGCAA 57.988 42.857 0.00 0.00 37.93 4.52
4914 5340 2.687935 TCTGTTGAAGACAAAGGGCAAC 59.312 45.455 0.00 0.00 37.93 4.17
4915 5341 2.426738 CTGTTGAAGACAAAGGGCAACA 59.573 45.455 0.00 0.00 44.38 3.33
4916 5342 2.828520 TGTTGAAGACAAAGGGCAACAA 59.171 40.909 0.00 0.00 43.84 2.83
4917 5343 3.450457 TGTTGAAGACAAAGGGCAACAAT 59.550 39.130 0.00 0.00 43.84 2.71
4918 5344 4.081198 TGTTGAAGACAAAGGGCAACAATT 60.081 37.500 0.00 0.00 43.84 2.32
4919 5345 5.127845 TGTTGAAGACAAAGGGCAACAATTA 59.872 36.000 0.00 0.00 43.84 1.40
4920 5346 5.452078 TGAAGACAAAGGGCAACAATTAG 57.548 39.130 0.00 0.00 39.74 1.73
4921 5347 4.280677 TGAAGACAAAGGGCAACAATTAGG 59.719 41.667 0.00 0.00 39.74 2.69
4922 5348 3.844640 AGACAAAGGGCAACAATTAGGT 58.155 40.909 0.00 0.00 39.74 3.08
4923 5349 3.573967 AGACAAAGGGCAACAATTAGGTG 59.426 43.478 0.00 0.00 38.24 4.00
4924 5350 2.632512 ACAAAGGGCAACAATTAGGTGG 59.367 45.455 0.00 0.00 34.69 4.61
4925 5351 1.937191 AAGGGCAACAATTAGGTGGG 58.063 50.000 0.00 0.00 34.69 4.61
4926 5352 0.783850 AGGGCAACAATTAGGTGGGT 59.216 50.000 0.00 0.00 34.69 4.51
4927 5353 1.149077 AGGGCAACAATTAGGTGGGTT 59.851 47.619 0.00 0.00 34.69 4.11
4928 5354 2.380590 AGGGCAACAATTAGGTGGGTTA 59.619 45.455 0.00 0.00 34.69 2.85
4929 5355 3.166679 GGGCAACAATTAGGTGGGTTAA 58.833 45.455 0.00 0.00 34.69 2.01
4930 5356 3.579151 GGGCAACAATTAGGTGGGTTAAA 59.421 43.478 0.00 0.00 34.69 1.52
4931 5357 4.224147 GGGCAACAATTAGGTGGGTTAAAT 59.776 41.667 0.00 0.00 34.69 1.40
4932 5358 5.280266 GGGCAACAATTAGGTGGGTTAAATT 60.280 40.000 0.00 0.00 34.69 1.82
4933 5359 6.234920 GGCAACAATTAGGTGGGTTAAATTT 58.765 36.000 0.00 0.00 34.69 1.82
4934 5360 6.148645 GGCAACAATTAGGTGGGTTAAATTTG 59.851 38.462 0.00 0.00 34.69 2.32
4935 5361 6.148645 GCAACAATTAGGTGGGTTAAATTTGG 59.851 38.462 0.00 0.00 34.69 3.28
4936 5362 7.445945 CAACAATTAGGTGGGTTAAATTTGGA 58.554 34.615 0.00 0.00 0.00 3.53
4937 5363 7.239763 ACAATTAGGTGGGTTAAATTTGGAG 57.760 36.000 0.00 0.00 0.00 3.86
4938 5364 7.013834 ACAATTAGGTGGGTTAAATTTGGAGA 58.986 34.615 0.00 0.00 0.00 3.71
4939 5365 7.678171 ACAATTAGGTGGGTTAAATTTGGAGAT 59.322 33.333 0.00 0.00 0.00 2.75
4940 5366 8.539544 CAATTAGGTGGGTTAAATTTGGAGATT 58.460 33.333 0.00 0.00 0.00 2.40
4941 5367 9.777008 AATTAGGTGGGTTAAATTTGGAGATTA 57.223 29.630 0.00 0.00 0.00 1.75
4942 5368 9.777008 ATTAGGTGGGTTAAATTTGGAGATTAA 57.223 29.630 0.00 0.00 0.00 1.40
4943 5369 9.603189 TTAGGTGGGTTAAATTTGGAGATTAAA 57.397 29.630 0.00 0.00 0.00 1.52
4944 5370 8.499288 AGGTGGGTTAAATTTGGAGATTAAAA 57.501 30.769 0.00 0.00 0.00 1.52
4945 5371 8.372459 AGGTGGGTTAAATTTGGAGATTAAAAC 58.628 33.333 0.00 0.00 0.00 2.43
4946 5372 8.372459 GGTGGGTTAAATTTGGAGATTAAAACT 58.628 33.333 0.00 0.00 0.00 2.66
4947 5373 9.419297 GTGGGTTAAATTTGGAGATTAAAACTC 57.581 33.333 0.00 4.97 0.00 3.01
4948 5374 9.374711 TGGGTTAAATTTGGAGATTAAAACTCT 57.625 29.630 0.00 0.00 35.10 3.24
4966 5392 8.862550 AAAACTCTATGTTCTTTCAAGCAAAG 57.137 30.769 0.00 0.00 42.80 2.77
4967 5393 6.566197 ACTCTATGTTCTTTCAAGCAAAGG 57.434 37.500 0.00 0.00 41.85 3.11
4968 5394 5.048434 ACTCTATGTTCTTTCAAGCAAAGGC 60.048 40.000 0.00 0.00 41.85 4.35
4969 5395 2.888834 TGTTCTTTCAAGCAAAGGCC 57.111 45.000 0.00 0.00 41.85 5.19
4970 5396 2.106566 TGTTCTTTCAAGCAAAGGCCA 58.893 42.857 5.01 0.00 41.85 5.36
4971 5397 2.159114 TGTTCTTTCAAGCAAAGGCCAC 60.159 45.455 5.01 0.00 41.85 5.01
4972 5398 1.039856 TCTTTCAAGCAAAGGCCACC 58.960 50.000 5.01 0.00 41.85 4.61
4973 5399 0.752054 CTTTCAAGCAAAGGCCACCA 59.248 50.000 5.01 0.00 42.56 4.17
4974 5400 1.345415 CTTTCAAGCAAAGGCCACCAT 59.655 47.619 5.01 0.00 42.56 3.55
4975 5401 0.968405 TTCAAGCAAAGGCCACCATC 59.032 50.000 5.01 0.00 42.56 3.51
4976 5402 0.178967 TCAAGCAAAGGCCACCATCA 60.179 50.000 5.01 0.00 42.56 3.07
4977 5403 0.680618 CAAGCAAAGGCCACCATCAA 59.319 50.000 5.01 0.00 42.56 2.57
4978 5404 1.070445 CAAGCAAAGGCCACCATCAAA 59.930 47.619 5.01 0.00 42.56 2.69
4979 5405 1.648116 AGCAAAGGCCACCATCAAAT 58.352 45.000 5.01 0.00 42.56 2.32
4980 5406 2.818921 AGCAAAGGCCACCATCAAATA 58.181 42.857 5.01 0.00 42.56 1.40
4981 5407 2.497273 AGCAAAGGCCACCATCAAATAC 59.503 45.455 5.01 0.00 42.56 1.89
4982 5408 2.233431 GCAAAGGCCACCATCAAATACA 59.767 45.455 5.01 0.00 0.00 2.29
4983 5409 3.676873 GCAAAGGCCACCATCAAATACAG 60.677 47.826 5.01 0.00 0.00 2.74
4984 5410 3.737559 AAGGCCACCATCAAATACAGA 57.262 42.857 5.01 0.00 0.00 3.41
4985 5411 3.004752 AGGCCACCATCAAATACAGAC 57.995 47.619 5.01 0.00 0.00 3.51
4986 5412 2.308570 AGGCCACCATCAAATACAGACA 59.691 45.455 5.01 0.00 0.00 3.41
4987 5413 3.053395 AGGCCACCATCAAATACAGACAT 60.053 43.478 5.01 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
649 657 4.743151 GCGTTTATTATGACGATCAGACCA 59.257 41.667 7.04 0.00 41.53 4.02
831 848 2.915604 AGATGGGGCAAGAAGAAGAAGA 59.084 45.455 0.00 0.00 0.00 2.87
832 849 3.277715 GAGATGGGGCAAGAAGAAGAAG 58.722 50.000 0.00 0.00 0.00 2.85
833 850 2.025887 GGAGATGGGGCAAGAAGAAGAA 60.026 50.000 0.00 0.00 0.00 2.52
834 851 1.561542 GGAGATGGGGCAAGAAGAAGA 59.438 52.381 0.00 0.00 0.00 2.87
835 852 1.283029 TGGAGATGGGGCAAGAAGAAG 59.717 52.381 0.00 0.00 0.00 2.85
836 853 1.371467 TGGAGATGGGGCAAGAAGAA 58.629 50.000 0.00 0.00 0.00 2.52
1184 1204 1.607628 CTAGCTGCGAATAGTACCCGT 59.392 52.381 0.00 0.00 0.00 5.28
1312 1332 1.066605 CGGTCGACGGAGGAAATATGT 59.933 52.381 17.47 0.00 39.42 2.29
1313 1333 1.335810 TCGGTCGACGGAGGAAATATG 59.664 52.381 20.54 0.00 44.45 1.78
1340 1362 5.500234 CCATGAACTCCAAGAACCTAATGA 58.500 41.667 0.00 0.00 0.00 2.57
1932 1955 3.245284 CCCGACTAATTAATCACGTGCTG 59.755 47.826 11.67 0.00 0.00 4.41
1959 1982 4.800993 CACGTTAATCTCCTGCTCTACTTG 59.199 45.833 0.00 0.00 0.00 3.16
2088 2111 0.463295 GCTTTAGGGGTCGGTTAGGC 60.463 60.000 0.00 0.00 0.00 3.93
2144 2167 2.031120 CATGCGGGGACATTGGTTAAT 58.969 47.619 0.00 0.00 0.00 1.40
2321 2358 2.301296 CGCCTTCTCCTCCATGTCATAT 59.699 50.000 0.00 0.00 0.00 1.78
2430 2467 9.674824 CGAGAAAAGGTAAATACGTATAGATGT 57.325 33.333 8.83 0.00 0.00 3.06
2432 2469 8.854117 ACCGAGAAAAGGTAAATACGTATAGAT 58.146 33.333 8.83 1.24 40.80 1.98
2433 2470 8.225603 ACCGAGAAAAGGTAAATACGTATAGA 57.774 34.615 8.83 0.00 40.80 1.98
2434 2471 8.862550 AACCGAGAAAAGGTAAATACGTATAG 57.137 34.615 8.83 0.00 41.95 1.31
2436 2473 9.651913 TTAAACCGAGAAAAGGTAAATACGTAT 57.348 29.630 1.14 1.14 41.95 3.06
2437 2474 9.651913 ATTAAACCGAGAAAAGGTAAATACGTA 57.348 29.630 0.00 0.00 41.95 3.57
2438 2475 7.961325 TTAAACCGAGAAAAGGTAAATACGT 57.039 32.000 0.00 0.00 41.95 3.57
2439 2476 8.658609 TGATTAAACCGAGAAAAGGTAAATACG 58.341 33.333 0.00 0.00 41.95 3.06
2479 2516 4.236935 CTGCACCAACAAAACACCATATC 58.763 43.478 0.00 0.00 0.00 1.63
2492 2535 2.029844 GTCCTCGAGCTGCACCAAC 61.030 63.158 6.99 0.00 0.00 3.77
2493 2536 0.898326 TAGTCCTCGAGCTGCACCAA 60.898 55.000 6.99 0.00 0.00 3.67
2605 2650 4.960469 ACTCTTCCTTCCCGTTCACATATA 59.040 41.667 0.00 0.00 0.00 0.86
2607 2652 3.056107 CACTCTTCCTTCCCGTTCACATA 60.056 47.826 0.00 0.00 0.00 2.29
2608 2653 1.978580 ACTCTTCCTTCCCGTTCACAT 59.021 47.619 0.00 0.00 0.00 3.21
2937 3024 0.178891 ACTTTGGCAGGGAGAGGAGA 60.179 55.000 2.26 0.00 0.00 3.71
2939 3026 1.909302 CTAACTTTGGCAGGGAGAGGA 59.091 52.381 2.26 0.00 0.00 3.71
3041 3158 1.202687 ACACACACACACATGAGGGAG 60.203 52.381 0.00 0.00 0.00 4.30
3042 3159 0.836606 ACACACACACACATGAGGGA 59.163 50.000 0.00 0.00 0.00 4.20
3043 3160 0.946528 CACACACACACACATGAGGG 59.053 55.000 0.00 0.00 0.00 4.30
3045 3162 2.009051 ACACACACACACACACATGAG 58.991 47.619 0.00 0.00 0.00 2.90
3046 3163 1.736681 CACACACACACACACACATGA 59.263 47.619 0.00 0.00 0.00 3.07
3048 3165 1.093972 CCACACACACACACACACAT 58.906 50.000 0.00 0.00 0.00 3.21
3095 3492 0.726827 CCTTATGCAAAAGCGAGCGA 59.273 50.000 0.00 0.00 0.00 4.93
3096 3493 0.863119 GCCTTATGCAAAAGCGAGCG 60.863 55.000 0.00 0.00 40.77 5.03
3119 3516 3.805207 ACAGTGCGAAAACTAGGAAAGT 58.195 40.909 0.00 0.00 41.49 2.66
3640 4047 0.806868 GAGGACATGACGTCGTGGTA 59.193 55.000 34.44 8.83 46.42 3.25
3681 4088 2.836360 ACGGTGACCAGGTCGTGT 60.836 61.111 15.24 9.94 34.95 4.49
3792 4199 2.043450 CGGTCTGGGCTCTCCTCT 60.043 66.667 0.00 0.00 36.20 3.69
3992 4399 0.525668 CTACATGTCCGACCGAGTGC 60.526 60.000 0.00 0.00 0.00 4.40
4005 4412 2.764314 GCCGTGGGCTTGCTACATG 61.764 63.158 0.00 0.00 46.69 3.21
4034 4441 2.103538 CTGCACGCCATTGCCATC 59.896 61.111 0.00 0.00 42.25 3.51
4038 4445 1.777101 TAAAAACTGCACGCCATTGC 58.223 45.000 0.00 0.00 43.31 3.56
4096 4504 1.290955 CACCAACTGCAGCCAATGG 59.709 57.895 15.27 18.70 35.31 3.16
4097 4505 1.290955 CCACCAACTGCAGCCAATG 59.709 57.895 15.27 7.64 0.00 2.82
4162 4574 4.330074 ACCGTGCATTTCTTCGATCTTAAG 59.670 41.667 0.00 0.00 0.00 1.85
4163 4575 4.092821 CACCGTGCATTTCTTCGATCTTAA 59.907 41.667 0.00 0.00 0.00 1.85
4207 4631 0.908180 ACCCCTTCTCCACCGGTAAG 60.908 60.000 6.87 7.41 0.00 2.34
4209 4633 0.474273 AAACCCCTTCTCCACCGGTA 60.474 55.000 6.87 0.00 0.00 4.02
4364 4788 5.823570 TCAATTTTCAAAAGGTGAGACCGTA 59.176 36.000 0.00 0.00 44.90 4.02
4390 4814 3.132824 AGTGATGCGTCCATGATGACTTA 59.867 43.478 2.83 0.00 32.97 2.24
4407 4831 4.180817 TGCACGTTTTGATCGATAGTGAT 58.819 39.130 0.00 0.00 37.40 3.06
4424 4848 5.856126 TTCTTTTACCAGTAAGATGCACG 57.144 39.130 0.00 0.00 31.00 5.34
4425 4849 9.937175 GATTATTCTTTTACCAGTAAGATGCAC 57.063 33.333 0.00 0.00 31.00 4.57
4431 4857 9.941664 CATGCAGATTATTCTTTTACCAGTAAG 57.058 33.333 0.00 0.00 0.00 2.34
4508 4934 3.766051 ACAGGATTGGAAAGAGGAATTGC 59.234 43.478 0.00 0.00 0.00 3.56
4509 4935 5.259632 AGACAGGATTGGAAAGAGGAATTG 58.740 41.667 0.00 0.00 0.00 2.32
4510 4936 5.504853 GAGACAGGATTGGAAAGAGGAATT 58.495 41.667 0.00 0.00 0.00 2.17
4511 4937 4.383552 CGAGACAGGATTGGAAAGAGGAAT 60.384 45.833 0.00 0.00 0.00 3.01
4512 4938 3.055819 CGAGACAGGATTGGAAAGAGGAA 60.056 47.826 0.00 0.00 0.00 3.36
4513 4939 2.497675 CGAGACAGGATTGGAAAGAGGA 59.502 50.000 0.00 0.00 0.00 3.71
4514 4940 2.419297 CCGAGACAGGATTGGAAAGAGG 60.419 54.545 0.00 0.00 0.00 3.69
4515 4941 2.497675 TCCGAGACAGGATTGGAAAGAG 59.502 50.000 0.00 0.00 34.92 2.85
4516 4942 2.536066 TCCGAGACAGGATTGGAAAGA 58.464 47.619 0.00 0.00 34.92 2.52
4525 4951 0.465705 GGCAATGATCCGAGACAGGA 59.534 55.000 0.00 0.00 45.54 3.86
4526 4952 0.533755 GGGCAATGATCCGAGACAGG 60.534 60.000 0.00 0.00 0.00 4.00
4527 4953 0.178767 TGGGCAATGATCCGAGACAG 59.821 55.000 0.00 0.00 0.00 3.51
4528 4954 0.839277 ATGGGCAATGATCCGAGACA 59.161 50.000 0.00 0.00 0.00 3.41
4529 4955 2.839486 TATGGGCAATGATCCGAGAC 57.161 50.000 0.00 0.00 0.00 3.36
4530 4956 2.639347 ACATATGGGCAATGATCCGAGA 59.361 45.455 7.80 0.00 0.00 4.04
4531 4957 3.005554 GACATATGGGCAATGATCCGAG 58.994 50.000 7.80 0.00 0.00 4.63
4532 4958 2.371510 TGACATATGGGCAATGATCCGA 59.628 45.455 7.80 0.00 0.00 4.55
4533 4959 2.781923 TGACATATGGGCAATGATCCG 58.218 47.619 7.80 0.00 0.00 4.18
4534 4960 4.597004 AGATGACATATGGGCAATGATCC 58.403 43.478 7.80 0.00 0.00 3.36
4535 4961 5.250982 TGAGATGACATATGGGCAATGATC 58.749 41.667 7.80 0.25 0.00 2.92
4536 4962 5.251182 TGAGATGACATATGGGCAATGAT 57.749 39.130 7.80 0.00 0.00 2.45
4537 4963 4.710313 TGAGATGACATATGGGCAATGA 57.290 40.909 7.80 0.00 0.00 2.57
4538 4964 5.977489 ATTGAGATGACATATGGGCAATG 57.023 39.130 7.80 0.00 0.00 2.82
4539 4965 5.245301 CCAATTGAGATGACATATGGGCAAT 59.755 40.000 7.12 4.77 0.00 3.56
4540 4966 4.585581 CCAATTGAGATGACATATGGGCAA 59.414 41.667 7.12 2.71 0.00 4.52
4541 4967 4.146564 CCAATTGAGATGACATATGGGCA 58.853 43.478 7.12 5.35 0.00 5.36
4542 4968 4.147321 ACCAATTGAGATGACATATGGGC 58.853 43.478 7.12 0.00 33.28 5.36
4543 4969 6.537355 AGTACCAATTGAGATGACATATGGG 58.463 40.000 7.12 0.00 33.28 4.00
4544 4970 7.332926 GCTAGTACCAATTGAGATGACATATGG 59.667 40.741 7.12 0.00 34.36 2.74
4545 4971 7.874528 TGCTAGTACCAATTGAGATGACATATG 59.125 37.037 7.12 0.00 0.00 1.78
4546 4972 7.966812 TGCTAGTACCAATTGAGATGACATAT 58.033 34.615 7.12 0.00 0.00 1.78
4547 4973 7.360113 TGCTAGTACCAATTGAGATGACATA 57.640 36.000 7.12 0.00 0.00 2.29
4548 4974 6.239217 TGCTAGTACCAATTGAGATGACAT 57.761 37.500 7.12 0.00 0.00 3.06
4549 4975 5.675684 TGCTAGTACCAATTGAGATGACA 57.324 39.130 7.12 0.00 0.00 3.58
4550 4976 6.647067 GGTATGCTAGTACCAATTGAGATGAC 59.353 42.308 7.12 0.00 42.98 3.06
4551 4977 6.759272 GGTATGCTAGTACCAATTGAGATGA 58.241 40.000 7.12 0.00 42.98 2.92
4562 4988 3.203716 GTGCCTTTGGTATGCTAGTACC 58.796 50.000 3.13 3.13 43.61 3.34
4563 4989 3.869065 TGTGCCTTTGGTATGCTAGTAC 58.131 45.455 0.00 0.00 0.00 2.73
4564 4990 4.019681 ACTTGTGCCTTTGGTATGCTAGTA 60.020 41.667 0.00 0.00 0.00 1.82
4565 4991 3.244911 ACTTGTGCCTTTGGTATGCTAGT 60.245 43.478 0.00 0.00 0.00 2.57
4566 4992 3.347216 ACTTGTGCCTTTGGTATGCTAG 58.653 45.455 0.00 0.00 0.00 3.42
4567 4993 3.433306 ACTTGTGCCTTTGGTATGCTA 57.567 42.857 0.00 0.00 0.00 3.49
4568 4994 2.292828 ACTTGTGCCTTTGGTATGCT 57.707 45.000 0.00 0.00 0.00 3.79
4569 4995 3.385193 AAACTTGTGCCTTTGGTATGC 57.615 42.857 0.00 0.00 0.00 3.14
4570 4996 6.744112 TCTAAAAACTTGTGCCTTTGGTATG 58.256 36.000 0.00 0.00 0.00 2.39
4571 4997 6.969993 TCTAAAAACTTGTGCCTTTGGTAT 57.030 33.333 0.00 0.00 0.00 2.73
4572 4998 6.969993 ATCTAAAAACTTGTGCCTTTGGTA 57.030 33.333 0.00 0.00 0.00 3.25
4573 4999 5.869649 ATCTAAAAACTTGTGCCTTTGGT 57.130 34.783 0.00 0.00 0.00 3.67
4574 5000 6.760770 TCAAATCTAAAAACTTGTGCCTTTGG 59.239 34.615 0.00 0.00 0.00 3.28
4575 5001 7.769272 TCAAATCTAAAAACTTGTGCCTTTG 57.231 32.000 0.00 0.00 0.00 2.77
4576 5002 8.785329 TTTCAAATCTAAAAACTTGTGCCTTT 57.215 26.923 0.00 0.00 0.00 3.11
4577 5003 8.664798 GTTTTCAAATCTAAAAACTTGTGCCTT 58.335 29.630 4.03 0.00 40.52 4.35
4578 5004 8.196802 GTTTTCAAATCTAAAAACTTGTGCCT 57.803 30.769 4.03 0.00 40.52 4.75
4590 5016 9.040939 GCTTAAGCCAAAAGTTTTCAAATCTAA 57.959 29.630 17.00 0.00 34.31 2.10
4591 5017 8.200792 TGCTTAAGCCAAAAGTTTTCAAATCTA 58.799 29.630 24.30 0.00 41.18 1.98
4592 5018 7.047271 TGCTTAAGCCAAAAGTTTTCAAATCT 58.953 30.769 24.30 0.00 41.18 2.40
4593 5019 7.245419 TGCTTAAGCCAAAAGTTTTCAAATC 57.755 32.000 24.30 0.00 41.18 2.17
4594 5020 7.498570 TGATGCTTAAGCCAAAAGTTTTCAAAT 59.501 29.630 24.30 5.96 41.18 2.32
4595 5021 6.820656 TGATGCTTAAGCCAAAAGTTTTCAAA 59.179 30.769 24.30 0.85 41.18 2.69
4596 5022 6.344500 TGATGCTTAAGCCAAAAGTTTTCAA 58.656 32.000 24.30 1.31 41.18 2.69
4597 5023 5.911752 TGATGCTTAAGCCAAAAGTTTTCA 58.088 33.333 24.30 10.06 41.18 2.69
4598 5024 8.532977 TTATGATGCTTAAGCCAAAAGTTTTC 57.467 30.769 24.30 7.91 41.18 2.29
4599 5025 9.506018 AATTATGATGCTTAAGCCAAAAGTTTT 57.494 25.926 24.30 7.08 41.18 2.43
4600 5026 9.506018 AAATTATGATGCTTAAGCCAAAAGTTT 57.494 25.926 24.30 13.58 41.18 2.66
4601 5027 9.154847 GAAATTATGATGCTTAAGCCAAAAGTT 57.845 29.630 24.30 15.32 41.18 2.66
4602 5028 8.313292 TGAAATTATGATGCTTAAGCCAAAAGT 58.687 29.630 24.30 8.32 41.18 2.66
4603 5029 8.706492 TGAAATTATGATGCTTAAGCCAAAAG 57.294 30.769 24.30 0.00 41.18 2.27
4604 5030 9.499479 TTTGAAATTATGATGCTTAAGCCAAAA 57.501 25.926 24.30 11.69 41.18 2.44
4605 5031 9.153721 CTTTGAAATTATGATGCTTAAGCCAAA 57.846 29.630 24.30 18.94 41.18 3.28
4606 5032 8.530311 TCTTTGAAATTATGATGCTTAAGCCAA 58.470 29.630 24.30 13.46 41.18 4.52
4607 5033 8.065473 TCTTTGAAATTATGATGCTTAAGCCA 57.935 30.769 24.30 16.05 41.18 4.75
4608 5034 8.408601 TCTCTTTGAAATTATGATGCTTAAGCC 58.591 33.333 24.30 10.68 41.18 4.35
4609 5035 9.230932 GTCTCTTTGAAATTATGATGCTTAAGC 57.769 33.333 20.84 20.84 42.50 3.09
4612 5038 9.453572 ACTGTCTCTTTGAAATTATGATGCTTA 57.546 29.630 0.00 0.00 0.00 3.09
4613 5039 8.345724 ACTGTCTCTTTGAAATTATGATGCTT 57.654 30.769 0.00 0.00 0.00 3.91
4614 5040 7.934855 ACTGTCTCTTTGAAATTATGATGCT 57.065 32.000 0.00 0.00 0.00 3.79
4615 5041 8.239314 TGAACTGTCTCTTTGAAATTATGATGC 58.761 33.333 0.00 0.00 0.00 3.91
4618 5044 8.292448 GCTTGAACTGTCTCTTTGAAATTATGA 58.708 33.333 0.00 0.00 0.00 2.15
4619 5045 8.295288 AGCTTGAACTGTCTCTTTGAAATTATG 58.705 33.333 0.00 0.00 0.00 1.90
4620 5046 8.401490 AGCTTGAACTGTCTCTTTGAAATTAT 57.599 30.769 0.00 0.00 0.00 1.28
4621 5047 7.807977 AGCTTGAACTGTCTCTTTGAAATTA 57.192 32.000 0.00 0.00 0.00 1.40
4622 5048 6.705863 AGCTTGAACTGTCTCTTTGAAATT 57.294 33.333 0.00 0.00 0.00 1.82
4623 5049 7.807977 TTAGCTTGAACTGTCTCTTTGAAAT 57.192 32.000 0.00 0.00 0.00 2.17
4624 5050 7.807977 ATTAGCTTGAACTGTCTCTTTGAAA 57.192 32.000 0.00 0.00 0.00 2.69
4625 5051 7.255242 CCAATTAGCTTGAACTGTCTCTTTGAA 60.255 37.037 0.00 0.00 36.97 2.69
4626 5052 6.205464 CCAATTAGCTTGAACTGTCTCTTTGA 59.795 38.462 0.00 0.00 36.97 2.69
4627 5053 6.376978 CCAATTAGCTTGAACTGTCTCTTTG 58.623 40.000 0.00 0.00 36.97 2.77
4628 5054 5.048434 GCCAATTAGCTTGAACTGTCTCTTT 60.048 40.000 0.00 0.00 36.97 2.52
4629 5055 4.457257 GCCAATTAGCTTGAACTGTCTCTT 59.543 41.667 0.00 0.00 36.97 2.85
4630 5056 4.006319 GCCAATTAGCTTGAACTGTCTCT 58.994 43.478 0.00 0.00 36.97 3.10
4631 5057 3.753272 TGCCAATTAGCTTGAACTGTCTC 59.247 43.478 0.00 0.00 36.97 3.36
4632 5058 3.754965 TGCCAATTAGCTTGAACTGTCT 58.245 40.909 0.00 0.00 36.97 3.41
4633 5059 4.229876 GTTGCCAATTAGCTTGAACTGTC 58.770 43.478 0.00 0.00 36.97 3.51
4634 5060 3.636300 TGTTGCCAATTAGCTTGAACTGT 59.364 39.130 0.00 0.00 36.97 3.55
4635 5061 4.241590 TGTTGCCAATTAGCTTGAACTG 57.758 40.909 0.00 0.00 36.97 3.16
4636 5062 4.501400 GGTTGTTGCCAATTAGCTTGAACT 60.501 41.667 0.00 0.00 36.97 3.01
4637 5063 3.740832 GGTTGTTGCCAATTAGCTTGAAC 59.259 43.478 0.00 0.00 36.97 3.18
4638 5064 3.640967 AGGTTGTTGCCAATTAGCTTGAA 59.359 39.130 0.00 0.00 36.97 2.69
4639 5065 3.230134 AGGTTGTTGCCAATTAGCTTGA 58.770 40.909 0.00 0.00 36.97 3.02
4640 5066 3.256631 AGAGGTTGTTGCCAATTAGCTTG 59.743 43.478 0.00 0.00 32.11 4.01
4641 5067 3.256631 CAGAGGTTGTTGCCAATTAGCTT 59.743 43.478 0.00 0.00 32.11 3.74
4642 5068 2.821969 CAGAGGTTGTTGCCAATTAGCT 59.178 45.455 0.00 0.00 32.11 3.32
4643 5069 2.819608 TCAGAGGTTGTTGCCAATTAGC 59.180 45.455 0.00 0.00 32.11 3.09
4644 5070 4.142315 CCATCAGAGGTTGTTGCCAATTAG 60.142 45.833 0.00 0.00 32.11 1.73
4645 5071 3.763360 CCATCAGAGGTTGTTGCCAATTA 59.237 43.478 0.00 0.00 32.11 1.40
4646 5072 2.564062 CCATCAGAGGTTGTTGCCAATT 59.436 45.455 0.00 0.00 32.11 2.32
4647 5073 2.173519 CCATCAGAGGTTGTTGCCAAT 58.826 47.619 0.00 0.00 32.11 3.16
4648 5074 1.619654 CCATCAGAGGTTGTTGCCAA 58.380 50.000 0.00 0.00 0.00 4.52
4649 5075 0.895100 GCCATCAGAGGTTGTTGCCA 60.895 55.000 0.00 0.00 0.00 4.92
4650 5076 0.895100 TGCCATCAGAGGTTGTTGCC 60.895 55.000 0.00 0.00 0.00 4.52
4651 5077 0.961019 TTGCCATCAGAGGTTGTTGC 59.039 50.000 0.00 0.00 0.00 4.17
4652 5078 2.030540 CACTTGCCATCAGAGGTTGTTG 60.031 50.000 0.00 0.00 0.00 3.33
4653 5079 2.158623 TCACTTGCCATCAGAGGTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
4654 5080 1.421268 TCACTTGCCATCAGAGGTTGT 59.579 47.619 0.00 0.00 0.00 3.32
4655 5081 1.808945 GTCACTTGCCATCAGAGGTTG 59.191 52.381 0.00 0.00 0.00 3.77
4656 5082 1.421268 TGTCACTTGCCATCAGAGGTT 59.579 47.619 0.00 0.00 0.00 3.50
4657 5083 1.002888 CTGTCACTTGCCATCAGAGGT 59.997 52.381 0.00 0.00 0.00 3.85
4658 5084 1.002888 ACTGTCACTTGCCATCAGAGG 59.997 52.381 0.00 0.00 0.00 3.69
4659 5085 2.074576 CACTGTCACTTGCCATCAGAG 58.925 52.381 0.00 0.00 0.00 3.35
4660 5086 1.879372 GCACTGTCACTTGCCATCAGA 60.879 52.381 0.00 0.00 32.21 3.27
4661 5087 0.520404 GCACTGTCACTTGCCATCAG 59.480 55.000 0.00 0.00 32.21 2.90
4662 5088 0.109153 AGCACTGTCACTTGCCATCA 59.891 50.000 0.00 0.00 39.75 3.07
4663 5089 2.099141 TAGCACTGTCACTTGCCATC 57.901 50.000 0.00 0.00 39.75 3.51
4664 5090 2.566833 TTAGCACTGTCACTTGCCAT 57.433 45.000 0.00 0.00 39.75 4.40
4665 5091 2.340210 TTTAGCACTGTCACTTGCCA 57.660 45.000 0.00 0.00 39.75 4.92
4666 5092 3.253188 TCAATTTAGCACTGTCACTTGCC 59.747 43.478 0.00 0.00 39.75 4.52
4667 5093 4.488126 TCAATTTAGCACTGTCACTTGC 57.512 40.909 0.00 0.00 39.16 4.01
4668 5094 6.072838 AGTGATCAATTTAGCACTGTCACTTG 60.073 38.462 9.63 0.00 44.07 3.16
4669 5095 6.000219 AGTGATCAATTTAGCACTGTCACTT 59.000 36.000 9.63 0.00 44.07 3.16
4670 5096 5.555017 AGTGATCAATTTAGCACTGTCACT 58.445 37.500 9.63 0.00 44.07 3.41
4671 5097 5.869753 AGTGATCAATTTAGCACTGTCAC 57.130 39.130 9.63 0.00 44.07 3.67
4676 5102 6.176183 ACTTAGCAGTGATCAATTTAGCACT 58.824 36.000 4.73 4.73 46.55 4.40
4677 5103 6.428385 ACTTAGCAGTGATCAATTTAGCAC 57.572 37.500 0.00 0.00 36.02 4.40
4678 5104 7.452880 AAACTTAGCAGTGATCAATTTAGCA 57.547 32.000 0.00 0.00 31.60 3.49
4679 5105 9.840427 TTTAAACTTAGCAGTGATCAATTTAGC 57.160 29.630 0.00 0.00 31.60 3.09
4683 5109 9.143631 GCATTTTAAACTTAGCAGTGATCAATT 57.856 29.630 0.00 0.00 31.60 2.32
4684 5110 8.526147 AGCATTTTAAACTTAGCAGTGATCAAT 58.474 29.630 0.00 0.00 31.60 2.57
4685 5111 7.885297 AGCATTTTAAACTTAGCAGTGATCAA 58.115 30.769 0.00 0.00 31.60 2.57
4686 5112 7.174772 TGAGCATTTTAAACTTAGCAGTGATCA 59.825 33.333 0.00 0.00 31.60 2.92
4687 5113 7.530010 TGAGCATTTTAAACTTAGCAGTGATC 58.470 34.615 0.00 0.00 31.60 2.92
4688 5114 7.391554 TCTGAGCATTTTAAACTTAGCAGTGAT 59.608 33.333 0.00 0.00 31.60 3.06
4689 5115 6.710295 TCTGAGCATTTTAAACTTAGCAGTGA 59.290 34.615 0.00 0.00 31.60 3.41
4690 5116 6.902341 TCTGAGCATTTTAAACTTAGCAGTG 58.098 36.000 0.00 0.00 31.60 3.66
4691 5117 7.510549 TTCTGAGCATTTTAAACTTAGCAGT 57.489 32.000 0.00 0.00 33.11 4.40
4692 5118 8.801715 TTTTCTGAGCATTTTAAACTTAGCAG 57.198 30.769 0.00 0.00 0.00 4.24
4693 5119 7.867403 CCTTTTCTGAGCATTTTAAACTTAGCA 59.133 33.333 0.00 0.00 0.00 3.49
4694 5120 7.148738 GCCTTTTCTGAGCATTTTAAACTTAGC 60.149 37.037 0.00 0.00 0.00 3.09
4695 5121 7.329471 GGCCTTTTCTGAGCATTTTAAACTTAG 59.671 37.037 0.00 0.00 0.00 2.18
4696 5122 7.015195 AGGCCTTTTCTGAGCATTTTAAACTTA 59.985 33.333 0.00 0.00 0.00 2.24
4697 5123 5.991606 GGCCTTTTCTGAGCATTTTAAACTT 59.008 36.000 0.00 0.00 0.00 2.66
4698 5124 5.305386 AGGCCTTTTCTGAGCATTTTAAACT 59.695 36.000 0.00 0.00 0.00 2.66
4699 5125 5.541845 AGGCCTTTTCTGAGCATTTTAAAC 58.458 37.500 0.00 0.00 0.00 2.01
4700 5126 5.806654 AGGCCTTTTCTGAGCATTTTAAA 57.193 34.783 0.00 0.00 0.00 1.52
4701 5127 6.909550 TTAGGCCTTTTCTGAGCATTTTAA 57.090 33.333 12.58 0.00 0.00 1.52
4702 5128 6.909550 TTTAGGCCTTTTCTGAGCATTTTA 57.090 33.333 12.58 0.00 0.00 1.52
4703 5129 5.806654 TTTAGGCCTTTTCTGAGCATTTT 57.193 34.783 12.58 0.00 0.00 1.82
4704 5130 5.806654 TTTTAGGCCTTTTCTGAGCATTT 57.193 34.783 12.58 0.00 0.00 2.32
4705 5131 5.806654 TTTTTAGGCCTTTTCTGAGCATT 57.193 34.783 12.58 0.00 0.00 3.56
4706 5132 6.364568 AATTTTTAGGCCTTTTCTGAGCAT 57.635 33.333 12.58 0.00 0.00 3.79
4707 5133 5.806654 AATTTTTAGGCCTTTTCTGAGCA 57.193 34.783 12.58 0.00 0.00 4.26
4708 5134 5.409520 CCAAATTTTTAGGCCTTTTCTGAGC 59.590 40.000 12.58 0.00 0.00 4.26
4709 5135 6.758254 TCCAAATTTTTAGGCCTTTTCTGAG 58.242 36.000 12.58 0.00 0.00 3.35
4710 5136 6.739331 TCCAAATTTTTAGGCCTTTTCTGA 57.261 33.333 12.58 1.01 0.00 3.27
4711 5137 5.409520 GCTCCAAATTTTTAGGCCTTTTCTG 59.590 40.000 12.58 0.00 0.00 3.02
4712 5138 5.071653 TGCTCCAAATTTTTAGGCCTTTTCT 59.928 36.000 12.58 0.00 0.00 2.52
4713 5139 5.304778 TGCTCCAAATTTTTAGGCCTTTTC 58.695 37.500 12.58 0.00 0.00 2.29
4714 5140 5.303259 TGCTCCAAATTTTTAGGCCTTTT 57.697 34.783 12.58 0.97 0.00 2.27
4715 5141 4.972751 TGCTCCAAATTTTTAGGCCTTT 57.027 36.364 12.58 0.00 0.00 3.11
4716 5142 4.592778 TCTTGCTCCAAATTTTTAGGCCTT 59.407 37.500 12.58 0.00 0.00 4.35
4717 5143 4.159557 TCTTGCTCCAAATTTTTAGGCCT 58.840 39.130 11.78 11.78 0.00 5.19
4718 5144 4.535526 TCTTGCTCCAAATTTTTAGGCC 57.464 40.909 0.00 0.00 0.00 5.19
4719 5145 5.296748 TGTTCTTGCTCCAAATTTTTAGGC 58.703 37.500 0.00 0.00 0.00 3.93
4720 5146 7.967890 AATGTTCTTGCTCCAAATTTTTAGG 57.032 32.000 0.00 0.00 0.00 2.69
4721 5147 9.044150 TGAAATGTTCTTGCTCCAAATTTTTAG 57.956 29.630 0.00 0.00 0.00 1.85
4722 5148 8.954950 TGAAATGTTCTTGCTCCAAATTTTTA 57.045 26.923 0.00 0.00 0.00 1.52
4723 5149 7.862512 TGAAATGTTCTTGCTCCAAATTTTT 57.137 28.000 0.00 0.00 0.00 1.94
4724 5150 7.862512 TTGAAATGTTCTTGCTCCAAATTTT 57.137 28.000 0.00 0.00 0.00 1.82
4725 5151 7.862512 TTTGAAATGTTCTTGCTCCAAATTT 57.137 28.000 0.00 0.00 0.00 1.82
4726 5152 8.454570 AATTTGAAATGTTCTTGCTCCAAATT 57.545 26.923 0.00 0.00 37.82 1.82
4727 5153 8.454570 AAATTTGAAATGTTCTTGCTCCAAAT 57.545 26.923 0.00 0.00 35.34 2.32
4728 5154 7.862512 AAATTTGAAATGTTCTTGCTCCAAA 57.137 28.000 0.00 0.00 0.00 3.28
4729 5155 7.171337 GCTAAATTTGAAATGTTCTTGCTCCAA 59.829 33.333 0.00 0.00 0.00 3.53
4730 5156 6.646240 GCTAAATTTGAAATGTTCTTGCTCCA 59.354 34.615 0.00 0.00 0.00 3.86
4731 5157 6.870439 AGCTAAATTTGAAATGTTCTTGCTCC 59.130 34.615 0.00 0.00 0.00 4.70
4732 5158 7.148689 CCAGCTAAATTTGAAATGTTCTTGCTC 60.149 37.037 0.00 0.00 0.00 4.26
4733 5159 6.647895 CCAGCTAAATTTGAAATGTTCTTGCT 59.352 34.615 0.00 0.00 0.00 3.91
4734 5160 6.619232 GCCAGCTAAATTTGAAATGTTCTTGC 60.619 38.462 0.00 0.00 0.00 4.01
4735 5161 6.424509 TGCCAGCTAAATTTGAAATGTTCTTG 59.575 34.615 0.00 0.00 0.00 3.02
4736 5162 6.523840 TGCCAGCTAAATTTGAAATGTTCTT 58.476 32.000 0.00 0.00 0.00 2.52
4737 5163 6.100404 TGCCAGCTAAATTTGAAATGTTCT 57.900 33.333 0.00 0.00 0.00 3.01
4738 5164 5.163923 GCTGCCAGCTAAATTTGAAATGTTC 60.164 40.000 10.04 0.00 38.45 3.18
4739 5165 4.692155 GCTGCCAGCTAAATTTGAAATGTT 59.308 37.500 10.04 0.00 38.45 2.71
4740 5166 4.248058 GCTGCCAGCTAAATTTGAAATGT 58.752 39.130 10.04 0.00 38.45 2.71
4741 5167 4.247258 TGCTGCCAGCTAAATTTGAAATG 58.753 39.130 18.96 0.00 42.97 2.32
4742 5168 4.540359 TGCTGCCAGCTAAATTTGAAAT 57.460 36.364 18.96 0.00 42.97 2.17
4743 5169 4.540359 ATGCTGCCAGCTAAATTTGAAA 57.460 36.364 18.96 0.00 42.97 2.69
4744 5170 4.021280 TGAATGCTGCCAGCTAAATTTGAA 60.021 37.500 18.96 0.00 42.97 2.69
4745 5171 3.510753 TGAATGCTGCCAGCTAAATTTGA 59.489 39.130 18.96 0.00 42.97 2.69
4746 5172 3.852286 TGAATGCTGCCAGCTAAATTTG 58.148 40.909 18.96 0.00 42.97 2.32
4747 5173 3.118884 CCTGAATGCTGCCAGCTAAATTT 60.119 43.478 18.96 3.88 42.97 1.82
4748 5174 2.429610 CCTGAATGCTGCCAGCTAAATT 59.570 45.455 18.96 9.35 42.97 1.82
4749 5175 2.029623 CCTGAATGCTGCCAGCTAAAT 58.970 47.619 18.96 0.00 42.97 1.40
4750 5176 1.466856 CCTGAATGCTGCCAGCTAAA 58.533 50.000 18.96 0.00 42.97 1.85
4751 5177 1.033746 GCCTGAATGCTGCCAGCTAA 61.034 55.000 18.96 0.00 42.97 3.09
4752 5178 1.452651 GCCTGAATGCTGCCAGCTA 60.453 57.895 18.96 4.73 42.97 3.32
4753 5179 2.754658 GCCTGAATGCTGCCAGCT 60.755 61.111 18.96 0.00 42.97 4.24
4754 5180 2.642254 TTGCCTGAATGCTGCCAGC 61.642 57.895 10.45 10.45 42.82 4.85
4755 5181 1.214589 GTTGCCTGAATGCTGCCAG 59.785 57.895 0.00 0.00 0.00 4.85
4756 5182 2.277591 GGTTGCCTGAATGCTGCCA 61.278 57.895 0.00 0.00 0.00 4.92
4757 5183 1.818959 TTGGTTGCCTGAATGCTGCC 61.819 55.000 0.00 0.00 0.00 4.85
4758 5184 0.668401 GTTGGTTGCCTGAATGCTGC 60.668 55.000 0.00 0.00 0.00 5.25
4759 5185 0.675083 TGTTGGTTGCCTGAATGCTG 59.325 50.000 0.00 0.00 0.00 4.41
4760 5186 1.412079 TTGTTGGTTGCCTGAATGCT 58.588 45.000 0.00 0.00 0.00 3.79
4761 5187 2.070783 CATTGTTGGTTGCCTGAATGC 58.929 47.619 0.00 0.00 0.00 3.56
4762 5188 3.389925 ACATTGTTGGTTGCCTGAATG 57.610 42.857 0.00 0.00 0.00 2.67
4763 5189 5.743636 ATAACATTGTTGGTTGCCTGAAT 57.256 34.783 12.30 0.00 0.00 2.57
4764 5190 6.849085 ATATAACATTGTTGGTTGCCTGAA 57.151 33.333 12.30 0.00 0.00 3.02
4765 5191 6.435591 TCAATATAACATTGTTGGTTGCCTGA 59.564 34.615 12.30 3.57 0.00 3.86
4766 5192 6.629128 TCAATATAACATTGTTGGTTGCCTG 58.371 36.000 12.30 1.49 0.00 4.85
4767 5193 6.849085 TCAATATAACATTGTTGGTTGCCT 57.151 33.333 12.30 0.00 0.00 4.75
4768 5194 7.010367 CACATCAATATAACATTGTTGGTTGCC 59.990 37.037 12.30 0.00 34.66 4.52
4769 5195 7.010367 CCACATCAATATAACATTGTTGGTTGC 59.990 37.037 12.30 0.00 34.66 4.17
4770 5196 7.492020 CCCACATCAATATAACATTGTTGGTTG 59.508 37.037 12.30 12.72 34.66 3.77
4771 5197 7.180051 ACCCACATCAATATAACATTGTTGGTT 59.820 33.333 12.30 1.86 34.66 3.67
4772 5198 6.667414 ACCCACATCAATATAACATTGTTGGT 59.333 34.615 12.30 3.49 34.66 3.67
4773 5199 7.111247 ACCCACATCAATATAACATTGTTGG 57.889 36.000 12.30 1.46 34.66 3.77
4774 5200 7.147932 TGGACCCACATCAATATAACATTGTTG 60.148 37.037 12.30 6.53 35.79 3.33
4775 5201 6.894654 TGGACCCACATCAATATAACATTGTT 59.105 34.615 7.30 7.30 0.00 2.83
4776 5202 6.321181 GTGGACCCACATCAATATAACATTGT 59.679 38.462 13.92 0.00 45.53 2.71
4777 5203 6.738114 GTGGACCCACATCAATATAACATTG 58.262 40.000 13.92 0.00 45.53 2.82
4778 5204 6.959639 GTGGACCCACATCAATATAACATT 57.040 37.500 13.92 0.00 45.53 2.71
4792 5218 2.586648 ATTCCTCAAAGTGGACCCAC 57.413 50.000 11.08 11.08 46.50 4.61
4793 5219 5.130477 GTCTATATTCCTCAAAGTGGACCCA 59.870 44.000 0.00 0.00 32.65 4.51
4794 5220 5.367060 AGTCTATATTCCTCAAAGTGGACCC 59.633 44.000 0.00 0.00 32.65 4.46
4795 5221 6.284459 CAGTCTATATTCCTCAAAGTGGACC 58.716 44.000 0.00 0.00 32.65 4.46
4796 5222 5.755861 GCAGTCTATATTCCTCAAAGTGGAC 59.244 44.000 0.00 0.00 32.65 4.02
4797 5223 5.663106 AGCAGTCTATATTCCTCAAAGTGGA 59.337 40.000 0.00 0.00 0.00 4.02
4798 5224 5.923204 AGCAGTCTATATTCCTCAAAGTGG 58.077 41.667 0.00 0.00 0.00 4.00
4799 5225 6.577103 TGAGCAGTCTATATTCCTCAAAGTG 58.423 40.000 0.00 0.00 0.00 3.16
4800 5226 6.798427 TGAGCAGTCTATATTCCTCAAAGT 57.202 37.500 0.00 0.00 0.00 2.66
4801 5227 7.930325 TCATTGAGCAGTCTATATTCCTCAAAG 59.070 37.037 5.17 1.92 41.09 2.77
4802 5228 7.712639 GTCATTGAGCAGTCTATATTCCTCAAA 59.287 37.037 5.17 0.00 41.09 2.69
4803 5229 7.147672 TGTCATTGAGCAGTCTATATTCCTCAA 60.148 37.037 0.00 0.00 41.70 3.02
4804 5230 6.324770 TGTCATTGAGCAGTCTATATTCCTCA 59.675 38.462 0.00 0.00 0.00 3.86
4805 5231 6.753180 TGTCATTGAGCAGTCTATATTCCTC 58.247 40.000 0.00 0.00 0.00 3.71
4806 5232 6.326064 ACTGTCATTGAGCAGTCTATATTCCT 59.674 38.462 12.97 0.00 41.58 3.36
4807 5233 6.423302 CACTGTCATTGAGCAGTCTATATTCC 59.577 42.308 14.83 0.00 43.27 3.01
4808 5234 7.205992 TCACTGTCATTGAGCAGTCTATATTC 58.794 38.462 14.83 0.00 43.27 1.75
4809 5235 7.117285 TCACTGTCATTGAGCAGTCTATATT 57.883 36.000 14.83 0.00 43.27 1.28
4810 5236 6.721704 TCACTGTCATTGAGCAGTCTATAT 57.278 37.500 14.83 0.00 43.27 0.86
4811 5237 6.071391 TGTTCACTGTCATTGAGCAGTCTATA 60.071 38.462 14.83 6.09 43.27 1.31
4812 5238 5.174395 GTTCACTGTCATTGAGCAGTCTAT 58.826 41.667 14.83 0.00 43.27 1.98
4813 5239 4.039124 TGTTCACTGTCATTGAGCAGTCTA 59.961 41.667 14.83 7.42 43.27 2.59
4814 5240 3.181462 TGTTCACTGTCATTGAGCAGTCT 60.181 43.478 14.83 0.00 43.27 3.24
4815 5241 3.059325 GTGTTCACTGTCATTGAGCAGTC 60.059 47.826 9.51 8.28 43.27 3.51
4816 5242 2.874701 GTGTTCACTGTCATTGAGCAGT 59.125 45.455 9.51 12.97 45.69 4.40
4817 5243 2.874086 TGTGTTCACTGTCATTGAGCAG 59.126 45.455 9.51 12.03 35.20 4.24
4818 5244 2.916640 TGTGTTCACTGTCATTGAGCA 58.083 42.857 5.75 5.75 32.43 4.26
4819 5245 3.969117 TTGTGTTCACTGTCATTGAGC 57.031 42.857 4.59 0.77 0.00 4.26
4820 5246 5.179929 TGCTATTGTGTTCACTGTCATTGAG 59.820 40.000 4.59 0.00 0.00 3.02
4821 5247 5.062528 TGCTATTGTGTTCACTGTCATTGA 58.937 37.500 4.59 0.00 0.00 2.57
4822 5248 5.179929 TCTGCTATTGTGTTCACTGTCATTG 59.820 40.000 4.59 0.00 0.00 2.82
4823 5249 5.308014 TCTGCTATTGTGTTCACTGTCATT 58.692 37.500 4.59 0.00 0.00 2.57
4824 5250 4.898320 TCTGCTATTGTGTTCACTGTCAT 58.102 39.130 4.59 0.00 0.00 3.06
4825 5251 4.039124 TCTCTGCTATTGTGTTCACTGTCA 59.961 41.667 4.59 0.00 0.00 3.58
4826 5252 4.560128 TCTCTGCTATTGTGTTCACTGTC 58.440 43.478 4.59 0.00 0.00 3.51
4827 5253 4.607293 TCTCTGCTATTGTGTTCACTGT 57.393 40.909 4.59 0.00 0.00 3.55
4828 5254 5.929697 TTTCTCTGCTATTGTGTTCACTG 57.070 39.130 4.59 0.00 0.00 3.66
4829 5255 5.106396 GCATTTCTCTGCTATTGTGTTCACT 60.106 40.000 4.59 0.00 39.12 3.41
4830 5256 5.091431 GCATTTCTCTGCTATTGTGTTCAC 58.909 41.667 0.00 0.00 39.12 3.18
4831 5257 5.300969 GCATTTCTCTGCTATTGTGTTCA 57.699 39.130 0.00 0.00 39.12 3.18
4842 5268 2.816087 TGTTCCTTGAGCATTTCTCTGC 59.184 45.455 0.00 0.00 42.38 4.26
4843 5269 6.318144 ACATATGTTCCTTGAGCATTTCTCTG 59.682 38.462 1.41 0.00 42.38 3.35
4844 5270 6.421485 ACATATGTTCCTTGAGCATTTCTCT 58.579 36.000 1.41 0.00 42.38 3.10
4845 5271 6.690194 ACATATGTTCCTTGAGCATTTCTC 57.310 37.500 1.41 0.00 42.23 2.87
4846 5272 8.579850 TTAACATATGTTCCTTGAGCATTTCT 57.420 30.769 24.00 0.00 39.31 2.52
4847 5273 9.638239 TTTTAACATATGTTCCTTGAGCATTTC 57.362 29.630 24.00 0.00 39.31 2.17
4848 5274 9.423061 GTTTTAACATATGTTCCTTGAGCATTT 57.577 29.630 24.00 0.00 39.31 2.32
4849 5275 8.806146 AGTTTTAACATATGTTCCTTGAGCATT 58.194 29.630 24.00 0.00 39.31 3.56
4850 5276 8.353423 AGTTTTAACATATGTTCCTTGAGCAT 57.647 30.769 24.00 0.00 39.31 3.79
4851 5277 7.759489 AGTTTTAACATATGTTCCTTGAGCA 57.241 32.000 24.00 1.83 39.31 4.26
4852 5278 8.515414 AGAAGTTTTAACATATGTTCCTTGAGC 58.485 33.333 24.00 10.65 39.31 4.26
4865 5291 8.826765 TCTCTGGAAGGATAGAAGTTTTAACAT 58.173 33.333 0.00 0.00 0.00 2.71
4866 5292 8.202461 TCTCTGGAAGGATAGAAGTTTTAACA 57.798 34.615 0.00 0.00 0.00 2.41
4867 5293 9.674068 ATTCTCTGGAAGGATAGAAGTTTTAAC 57.326 33.333 0.00 0.00 34.70 2.01
4868 5294 9.892130 GATTCTCTGGAAGGATAGAAGTTTTAA 57.108 33.333 0.00 0.00 34.70 1.52
4869 5295 9.273137 AGATTCTCTGGAAGGATAGAAGTTTTA 57.727 33.333 0.00 0.00 34.70 1.52
4870 5296 8.046107 CAGATTCTCTGGAAGGATAGAAGTTTT 58.954 37.037 0.00 0.00 40.71 2.43
4871 5297 7.563906 CAGATTCTCTGGAAGGATAGAAGTTT 58.436 38.462 0.00 0.00 40.71 2.66
4872 5298 7.123355 CAGATTCTCTGGAAGGATAGAAGTT 57.877 40.000 0.00 0.00 40.71 2.66
4873 5299 6.729690 CAGATTCTCTGGAAGGATAGAAGT 57.270 41.667 0.00 0.00 40.71 3.01
4887 5313 5.312079 CCCTTTGTCTTCAACAGATTCTCT 58.688 41.667 0.00 0.00 39.58 3.10
4888 5314 4.083057 GCCCTTTGTCTTCAACAGATTCTC 60.083 45.833 0.00 0.00 39.58 2.87
4889 5315 3.823304 GCCCTTTGTCTTCAACAGATTCT 59.177 43.478 0.00 0.00 39.58 2.40
4890 5316 3.569701 TGCCCTTTGTCTTCAACAGATTC 59.430 43.478 0.00 0.00 39.58 2.52
4891 5317 3.565307 TGCCCTTTGTCTTCAACAGATT 58.435 40.909 0.00 0.00 39.58 2.40
4892 5318 3.228188 TGCCCTTTGTCTTCAACAGAT 57.772 42.857 0.00 0.00 39.58 2.90
4893 5319 2.687935 GTTGCCCTTTGTCTTCAACAGA 59.312 45.455 0.00 0.00 39.58 3.41
4894 5320 2.426738 TGTTGCCCTTTGTCTTCAACAG 59.573 45.455 0.00 0.00 41.12 3.16
4895 5321 2.451490 TGTTGCCCTTTGTCTTCAACA 58.549 42.857 0.00 0.00 42.95 3.33
4896 5322 3.518634 TTGTTGCCCTTTGTCTTCAAC 57.481 42.857 0.00 0.00 37.94 3.18
4897 5323 4.751767 AATTGTTGCCCTTTGTCTTCAA 57.248 36.364 0.00 0.00 0.00 2.69
4898 5324 4.280677 CCTAATTGTTGCCCTTTGTCTTCA 59.719 41.667 0.00 0.00 0.00 3.02
4899 5325 4.280929 ACCTAATTGTTGCCCTTTGTCTTC 59.719 41.667 0.00 0.00 0.00 2.87
4900 5326 4.039124 CACCTAATTGTTGCCCTTTGTCTT 59.961 41.667 0.00 0.00 0.00 3.01
4901 5327 3.573967 CACCTAATTGTTGCCCTTTGTCT 59.426 43.478 0.00 0.00 0.00 3.41
4902 5328 3.306019 CCACCTAATTGTTGCCCTTTGTC 60.306 47.826 0.00 0.00 0.00 3.18
4903 5329 2.632512 CCACCTAATTGTTGCCCTTTGT 59.367 45.455 0.00 0.00 0.00 2.83
4904 5330 2.028203 CCCACCTAATTGTTGCCCTTTG 60.028 50.000 0.00 0.00 0.00 2.77
4905 5331 2.256306 CCCACCTAATTGTTGCCCTTT 58.744 47.619 0.00 0.00 0.00 3.11
4906 5332 1.149077 ACCCACCTAATTGTTGCCCTT 59.851 47.619 0.00 0.00 0.00 3.95
4907 5333 0.783850 ACCCACCTAATTGTTGCCCT 59.216 50.000 0.00 0.00 0.00 5.19
4908 5334 1.639722 AACCCACCTAATTGTTGCCC 58.360 50.000 0.00 0.00 0.00 5.36
4909 5335 4.875561 TTTAACCCACCTAATTGTTGCC 57.124 40.909 0.00 0.00 0.00 4.52
4910 5336 6.148645 CCAAATTTAACCCACCTAATTGTTGC 59.851 38.462 0.00 0.00 0.00 4.17
4911 5337 7.445945 TCCAAATTTAACCCACCTAATTGTTG 58.554 34.615 0.00 0.00 0.00 3.33
4912 5338 7.511028 TCTCCAAATTTAACCCACCTAATTGTT 59.489 33.333 0.00 0.00 0.00 2.83
4913 5339 7.013834 TCTCCAAATTTAACCCACCTAATTGT 58.986 34.615 0.00 0.00 0.00 2.71
4914 5340 7.475137 TCTCCAAATTTAACCCACCTAATTG 57.525 36.000 0.00 0.00 0.00 2.32
4915 5341 8.679344 AATCTCCAAATTTAACCCACCTAATT 57.321 30.769 0.00 0.00 0.00 1.40
4916 5342 9.777008 TTAATCTCCAAATTTAACCCACCTAAT 57.223 29.630 0.00 0.00 0.00 1.73
4917 5343 9.603189 TTTAATCTCCAAATTTAACCCACCTAA 57.397 29.630 0.00 0.00 0.00 2.69
4918 5344 9.603189 TTTTAATCTCCAAATTTAACCCACCTA 57.397 29.630 0.00 0.00 0.00 3.08
4919 5345 8.372459 GTTTTAATCTCCAAATTTAACCCACCT 58.628 33.333 0.00 0.00 0.00 4.00
4920 5346 8.372459 AGTTTTAATCTCCAAATTTAACCCACC 58.628 33.333 0.00 0.00 0.00 4.61
4921 5347 9.419297 GAGTTTTAATCTCCAAATTTAACCCAC 57.581 33.333 0.00 0.00 0.00 4.61
4922 5348 9.374711 AGAGTTTTAATCTCCAAATTTAACCCA 57.625 29.630 0.00 0.00 32.93 4.51
4940 5366 9.950680 CTTTGCTTGAAAGAACATAGAGTTTTA 57.049 29.630 0.00 0.00 43.50 1.52
4941 5367 7.922811 CCTTTGCTTGAAAGAACATAGAGTTTT 59.077 33.333 0.00 0.00 43.50 2.43
4942 5368 7.428826 CCTTTGCTTGAAAGAACATAGAGTTT 58.571 34.615 0.00 0.00 43.50 2.66
4943 5369 6.515696 GCCTTTGCTTGAAAGAACATAGAGTT 60.516 38.462 0.00 0.00 43.50 3.01
4944 5370 5.048434 GCCTTTGCTTGAAAGAACATAGAGT 60.048 40.000 0.00 0.00 43.50 3.24
4945 5371 5.397326 GCCTTTGCTTGAAAGAACATAGAG 58.603 41.667 0.00 0.00 43.50 2.43
4946 5372 4.218417 GGCCTTTGCTTGAAAGAACATAGA 59.782 41.667 0.00 0.00 43.50 1.98
4947 5373 4.022068 TGGCCTTTGCTTGAAAGAACATAG 60.022 41.667 3.32 0.00 43.50 2.23
4948 5374 3.894427 TGGCCTTTGCTTGAAAGAACATA 59.106 39.130 3.32 0.00 43.50 2.29
4949 5375 2.699846 TGGCCTTTGCTTGAAAGAACAT 59.300 40.909 3.32 0.00 43.50 2.71
4950 5376 2.106566 TGGCCTTTGCTTGAAAGAACA 58.893 42.857 3.32 0.00 43.50 3.18
4951 5377 2.473816 GTGGCCTTTGCTTGAAAGAAC 58.526 47.619 3.32 0.00 43.50 3.01
4952 5378 1.412343 GGTGGCCTTTGCTTGAAAGAA 59.588 47.619 3.32 0.00 43.50 2.52
4953 5379 1.039856 GGTGGCCTTTGCTTGAAAGA 58.960 50.000 3.32 0.00 43.50 2.52
4954 5380 0.752054 TGGTGGCCTTTGCTTGAAAG 59.248 50.000 3.32 0.00 40.86 2.62
4955 5381 1.344114 GATGGTGGCCTTTGCTTGAAA 59.656 47.619 3.32 0.00 37.74 2.69
4956 5382 0.968405 GATGGTGGCCTTTGCTTGAA 59.032 50.000 3.32 0.00 37.74 2.69
4957 5383 0.178967 TGATGGTGGCCTTTGCTTGA 60.179 50.000 3.32 0.00 37.74 3.02
4958 5384 0.680618 TTGATGGTGGCCTTTGCTTG 59.319 50.000 3.32 0.00 37.74 4.01
4959 5385 1.422531 TTTGATGGTGGCCTTTGCTT 58.577 45.000 3.32 0.00 37.74 3.91
4960 5386 1.648116 ATTTGATGGTGGCCTTTGCT 58.352 45.000 3.32 0.00 37.74 3.91
4961 5387 2.233431 TGTATTTGATGGTGGCCTTTGC 59.767 45.455 3.32 0.00 0.00 3.68
4962 5388 3.763360 TCTGTATTTGATGGTGGCCTTTG 59.237 43.478 3.32 0.00 0.00 2.77
4963 5389 3.763897 GTCTGTATTTGATGGTGGCCTTT 59.236 43.478 3.32 0.00 0.00 3.11
4964 5390 3.245229 TGTCTGTATTTGATGGTGGCCTT 60.245 43.478 3.32 0.00 0.00 4.35
4965 5391 2.308570 TGTCTGTATTTGATGGTGGCCT 59.691 45.455 3.32 0.00 0.00 5.19
4966 5392 2.722094 TGTCTGTATTTGATGGTGGCC 58.278 47.619 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.