Multiple sequence alignment - TraesCS2D01G254300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G254300 chr2D 100.000 6436 0 0 1 6436 306488858 306495293 0.000000e+00 11886.0
1 TraesCS2D01G254300 chr2D 98.026 2431 43 3 1892 4319 549939752 549937324 0.000000e+00 4218.0
2 TraesCS2D01G254300 chr2D 94.382 89 5 0 602 690 353317511 353317423 3.130000e-28 137.0
3 TraesCS2D01G254300 chr7D 98.438 2432 34 2 1892 4319 412677001 412679432 0.000000e+00 4277.0
4 TraesCS2D01G254300 chr7D 98.027 2433 43 3 1890 4319 572636536 572638966 0.000000e+00 4222.0
5 TraesCS2D01G254300 chr7D 80.483 497 82 10 5928 6417 326509254 326508766 3.670000e-97 366.0
6 TraesCS2D01G254300 chr7D 88.112 143 14 3 5544 5685 548883397 548883537 3.990000e-37 167.0
7 TraesCS2D01G254300 chr7D 93.750 48 2 1 370 417 619010148 619010102 3.220000e-08 71.3
8 TraesCS2D01G254300 chr5D 98.274 2433 36 3 1891 4319 432502526 432500096 0.000000e+00 4255.0
9 TraesCS2D01G254300 chr5D 97.984 2431 40 7 1892 4319 477305816 477303392 0.000000e+00 4209.0
10 TraesCS2D01G254300 chr5D 96.133 2431 91 1 1892 4319 310501383 310498953 0.000000e+00 3965.0
11 TraesCS2D01G254300 chr7A 97.082 2433 67 2 1892 4320 80977340 80974908 0.000000e+00 4096.0
12 TraesCS2D01G254300 chr7A 79.919 493 88 8 5928 6415 449241432 449241918 1.030000e-92 351.0
13 TraesCS2D01G254300 chr7A 99.194 124 1 0 5716 5839 638508076 638508199 2.340000e-54 224.0
14 TraesCS2D01G254300 chr7A 99.194 124 1 0 5716 5839 708245216 708245093 2.340000e-54 224.0
15 TraesCS2D01G254300 chr7A 93.182 88 6 0 602 689 6342154 6342241 5.240000e-26 130.0
16 TraesCS2D01G254300 chr7A 100.000 32 0 0 5686 5717 60173657 60173688 6.970000e-05 60.2
17 TraesCS2D01G254300 chr4D 97.038 2431 48 3 1892 4319 464987123 464984714 0.000000e+00 4069.0
18 TraesCS2D01G254300 chr4D 81.585 467 73 9 5928 6389 258679836 258680294 2.190000e-99 374.0
19 TraesCS2D01G254300 chr4D 100.000 32 0 0 5686 5717 123470784 123470753 6.970000e-05 60.2
20 TraesCS2D01G254300 chr4D 100.000 32 0 0 5686 5717 123638041 123638072 6.970000e-05 60.2
21 TraesCS2D01G254300 chr4A 94.084 2434 138 3 1892 4319 159496654 159499087 0.000000e+00 3692.0
22 TraesCS2D01G254300 chr4A 95.556 90 4 0 5839 5928 618233906 618233817 1.870000e-30 145.0
23 TraesCS2D01G254300 chr2B 92.389 1708 82 18 168 1867 374684182 374685849 0.000000e+00 2390.0
24 TraesCS2D01G254300 chr2B 95.982 672 17 6 4424 5093 374686038 374686701 0.000000e+00 1083.0
25 TraesCS2D01G254300 chr2B 91.176 170 7 4 1 167 374683964 374684128 2.340000e-54 224.0
26 TraesCS2D01G254300 chr2B 93.333 90 6 0 5839 5928 235504191 235504102 4.050000e-27 134.0
27 TraesCS2D01G254300 chr2B 92.222 90 7 0 5839 5928 138085345 138085434 1.880000e-25 128.0
28 TraesCS2D01G254300 chr2B 92.222 90 7 0 5839 5928 309114444 309114355 1.880000e-25 128.0
29 TraesCS2D01G254300 chr2B 87.879 99 9 3 5588 5685 309114536 309114440 5.270000e-21 113.0
30 TraesCS2D01G254300 chr2A 95.025 804 19 9 1073 1867 386056617 386057408 0.000000e+00 1243.0
31 TraesCS2D01G254300 chr2A 96.965 626 15 3 4424 5047 386057604 386058227 0.000000e+00 1048.0
32 TraesCS2D01G254300 chr2A 89.286 672 66 3 329 998 386008686 386009353 0.000000e+00 837.0
33 TraesCS2D01G254300 chr2A 89.888 356 16 5 5042 5377 386058481 386058836 2.130000e-119 440.0
34 TraesCS2D01G254300 chr2A 95.528 246 9 1 5301 5544 386058817 386059062 6.050000e-105 392.0
35 TraesCS2D01G254300 chr2A 94.545 165 4 1 168 332 385981038 385981197 3.850000e-62 250.0
36 TraesCS2D01G254300 chr2A 86.782 174 16 3 1 167 385980812 385980985 3.060000e-43 187.0
37 TraesCS2D01G254300 chr2A 94.382 89 4 1 990 1077 386011376 386011464 1.130000e-27 135.0
38 TraesCS2D01G254300 chr2A 93.258 89 5 1 990 1077 386011916 386012004 5.240000e-26 130.0
39 TraesCS2D01G254300 chr3B 81.262 507 85 6 5931 6432 333587190 333586689 1.010000e-107 401.0
40 TraesCS2D01G254300 chr3B 99.200 125 1 0 5716 5840 39876667 39876543 6.490000e-55 226.0
41 TraesCS2D01G254300 chr3B 94.444 90 5 0 602 691 471474222 471474311 8.700000e-29 139.0
42 TraesCS2D01G254300 chr3B 94.318 88 5 0 602 689 154824053 154824140 1.130000e-27 135.0
43 TraesCS2D01G254300 chr3B 94.318 88 5 0 602 689 699177772 699177859 1.130000e-27 135.0
44 TraesCS2D01G254300 chr3B 90.909 99 8 1 596 693 16915108 16915010 1.460000e-26 132.0
45 TraesCS2D01G254300 chr1D 81.504 492 80 7 5932 6417 180252064 180252550 1.680000e-105 394.0
46 TraesCS2D01G254300 chr1D 90.805 87 8 0 602 688 136947551 136947637 4.080000e-22 117.0
47 TraesCS2D01G254300 chr1D 90.110 91 6 3 602 690 491415879 491415968 1.470000e-21 115.0
48 TraesCS2D01G254300 chr1D 90.698 86 7 1 602 687 205511063 205510979 5.270000e-21 113.0
49 TraesCS2D01G254300 chr1D 89.011 91 9 1 602 691 439085804 439085894 1.900000e-20 111.0
50 TraesCS2D01G254300 chr1D 89.655 87 9 0 604 690 475907330 475907416 1.900000e-20 111.0
51 TraesCS2D01G254300 chr1D 89.655 87 8 1 602 688 326785868 326785783 6.820000e-20 110.0
52 TraesCS2D01G254300 chr1D 89.535 86 8 1 604 689 106293023 106293107 2.450000e-19 108.0
53 TraesCS2D01G254300 chr1D 89.412 85 6 3 612 694 8926680 8926597 3.170000e-18 104.0
54 TraesCS2D01G254300 chr1D 87.912 91 7 2 602 692 26204419 26204505 3.170000e-18 104.0
55 TraesCS2D01G254300 chr1D 87.500 88 11 0 602 689 18807288 18807375 1.140000e-17 102.0
56 TraesCS2D01G254300 chr1D 100.000 32 0 0 5686 5717 351094374 351094405 6.970000e-05 60.2
57 TraesCS2D01G254300 chr7B 81.028 506 82 10 5931 6431 323413345 323413841 2.180000e-104 390.0
58 TraesCS2D01G254300 chr7B 99.194 124 1 0 5716 5839 54049691 54049814 2.340000e-54 224.0
59 TraesCS2D01G254300 chr7B 99.194 124 1 0 5716 5839 54050277 54050400 2.340000e-54 224.0
60 TraesCS2D01G254300 chr7B 93.258 89 6 0 602 690 453114865 453114953 1.460000e-26 132.0
61 TraesCS2D01G254300 chr7B 93.333 90 5 1 602 690 567993821 567993732 1.460000e-26 132.0
62 TraesCS2D01G254300 chr7B 92.308 91 7 0 602 692 735986972 735987062 5.240000e-26 130.0
63 TraesCS2D01G254300 chr6A 80.684 497 82 10 5928 6417 189682462 189682951 2.190000e-99 374.0
64 TraesCS2D01G254300 chr6A 100.000 32 0 0 5686 5717 9656806 9656775 6.970000e-05 60.2
65 TraesCS2D01G254300 chr6A 100.000 32 0 0 5686 5717 9700928 9700897 6.970000e-05 60.2
66 TraesCS2D01G254300 chr3D 80.204 490 83 9 5932 6415 223096812 223096331 7.940000e-94 355.0
67 TraesCS2D01G254300 chr3D 91.753 97 6 2 596 690 537282918 537282822 4.050000e-27 134.0
68 TraesCS2D01G254300 chr3D 93.750 48 3 0 369 416 579045137 579045090 8.950000e-09 73.1
69 TraesCS2D01G254300 chr6D 79.878 492 85 8 5932 6417 205836793 205836310 1.330000e-91 348.0
70 TraesCS2D01G254300 chr6D 95.506 89 4 0 602 690 143958530 143958442 6.730000e-30 143.0
71 TraesCS2D01G254300 chr6D 91.011 89 8 0 603 691 8343823 8343735 3.150000e-23 121.0
72 TraesCS2D01G254300 chr6D 93.750 80 5 0 610 689 59783115 59783194 3.150000e-23 121.0
73 TraesCS2D01G254300 chr6D 90.909 88 8 0 602 689 456296540 456296627 1.130000e-22 119.0
74 TraesCS2D01G254300 chrUn 99.194 124 1 0 5716 5839 432741942 432741819 2.340000e-54 224.0
75 TraesCS2D01G254300 chrUn 95.455 88 4 0 5839 5926 143907812 143907899 2.420000e-29 141.0
76 TraesCS2D01G254300 chrUn 87.640 89 8 1 602 690 224305623 224305538 4.110000e-17 100.0
77 TraesCS2D01G254300 chrUn 87.640 89 8 1 602 690 375623352 375623267 4.110000e-17 100.0
78 TraesCS2D01G254300 chrUn 89.189 74 6 2 604 677 271013416 271013487 2.470000e-14 91.6
79 TraesCS2D01G254300 chrUn 89.189 74 6 2 604 677 280884103 280884174 2.470000e-14 91.6
80 TraesCS2D01G254300 chrUn 94.444 54 3 0 636 689 48998623 48998570 4.140000e-12 84.2
81 TraesCS2D01G254300 chrUn 92.727 55 4 0 610 664 213221169 213221223 5.350000e-11 80.5
82 TraesCS2D01G254300 chrUn 92.727 55 4 0 610 664 213240541 213240595 5.350000e-11 80.5
83 TraesCS2D01G254300 chrUn 100.000 32 0 0 5686 5717 182449995 182449964 6.970000e-05 60.2
84 TraesCS2D01G254300 chrUn 100.000 32 0 0 5686 5717 222880292 222880261 6.970000e-05 60.2
85 TraesCS2D01G254300 chrUn 100.000 32 0 0 5686 5717 281718710 281718741 6.970000e-05 60.2
86 TraesCS2D01G254300 chr6B 99.194 124 1 0 5716 5839 596602269 596602392 2.340000e-54 224.0
87 TraesCS2D01G254300 chr6B 99.194 124 1 0 5716 5839 715991748 715991871 2.340000e-54 224.0
88 TraesCS2D01G254300 chr6B 94.444 90 5 0 5839 5928 23452608 23452697 8.700000e-29 139.0
89 TraesCS2D01G254300 chr6B 94.444 90 5 0 602 691 33970953 33971042 8.700000e-29 139.0
90 TraesCS2D01G254300 chr6B 93.333 90 5 1 602 690 41766500 41766589 1.460000e-26 132.0
91 TraesCS2D01G254300 chr6B 93.258 89 6 0 602 690 502012218 502012130 1.460000e-26 132.0
92 TraesCS2D01G254300 chr6B 93.333 90 5 1 602 690 702221796 702221885 1.460000e-26 132.0
93 TraesCS2D01G254300 chr6B 92.308 91 6 1 602 691 119823518 119823608 1.880000e-25 128.0
94 TraesCS2D01G254300 chr1A 99.194 124 1 0 5716 5839 94580484 94580361 2.340000e-54 224.0
95 TraesCS2D01G254300 chr1A 93.902 82 4 1 610 690 520944588 520944669 8.760000e-24 122.0
96 TraesCS2D01G254300 chr1A 89.130 92 8 1 602 691 21607520 21607611 5.270000e-21 113.0
97 TraesCS2D01G254300 chr4B 94.444 90 4 1 5839 5928 91119225 91119137 3.130000e-28 137.0
98 TraesCS2D01G254300 chr4B 93.182 88 6 0 602 689 330748914 330748827 5.240000e-26 130.0
99 TraesCS2D01G254300 chr4B 90.722 97 7 2 596 690 408974851 408974947 1.880000e-25 128.0
100 TraesCS2D01G254300 chr4B 92.135 89 7 0 5840 5928 348951164 348951076 6.770000e-25 126.0
101 TraesCS2D01G254300 chr4B 95.000 80 4 0 610 689 546575674 546575595 6.770000e-25 126.0
102 TraesCS2D01G254300 chr4B 95.000 80 4 0 610 689 546598041 546597962 6.770000e-25 126.0
103 TraesCS2D01G254300 chr4B 92.135 89 7 0 602 690 617392809 617392721 6.770000e-25 126.0
104 TraesCS2D01G254300 chr4B 91.111 90 7 1 602 690 16082412 16082501 3.150000e-23 121.0
105 TraesCS2D01G254300 chr5B 91.753 97 6 2 602 697 445179526 445179621 4.050000e-27 134.0
106 TraesCS2D01G254300 chr5B 93.407 91 5 1 602 692 511291507 511291596 4.050000e-27 134.0
107 TraesCS2D01G254300 chr5B 94.253 87 5 0 602 688 643149495 643149581 4.050000e-27 134.0
108 TraesCS2D01G254300 chr1B 93.333 90 6 0 5839 5928 533866599 533866510 4.050000e-27 134.0
109 TraesCS2D01G254300 chr1B 93.407 91 5 1 602 691 595351802 595351892 4.050000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G254300 chr2D 306488858 306495293 6435 False 11886.000000 11886 100.000000 1 6436 1 chr2D.!!$F1 6435
1 TraesCS2D01G254300 chr2D 549937324 549939752 2428 True 4218.000000 4218 98.026000 1892 4319 1 chr2D.!!$R2 2427
2 TraesCS2D01G254300 chr7D 412677001 412679432 2431 False 4277.000000 4277 98.438000 1892 4319 1 chr7D.!!$F1 2427
3 TraesCS2D01G254300 chr7D 572636536 572638966 2430 False 4222.000000 4222 98.027000 1890 4319 1 chr7D.!!$F3 2429
4 TraesCS2D01G254300 chr5D 432500096 432502526 2430 True 4255.000000 4255 98.274000 1891 4319 1 chr5D.!!$R2 2428
5 TraesCS2D01G254300 chr5D 477303392 477305816 2424 True 4209.000000 4209 97.984000 1892 4319 1 chr5D.!!$R3 2427
6 TraesCS2D01G254300 chr5D 310498953 310501383 2430 True 3965.000000 3965 96.133000 1892 4319 1 chr5D.!!$R1 2427
7 TraesCS2D01G254300 chr7A 80974908 80977340 2432 True 4096.000000 4096 97.082000 1892 4320 1 chr7A.!!$R1 2428
8 TraesCS2D01G254300 chr4D 464984714 464987123 2409 True 4069.000000 4069 97.038000 1892 4319 1 chr4D.!!$R2 2427
9 TraesCS2D01G254300 chr4A 159496654 159499087 2433 False 3692.000000 3692 94.084000 1892 4319 1 chr4A.!!$F1 2427
10 TraesCS2D01G254300 chr2B 374683964 374686701 2737 False 1232.333333 2390 93.182333 1 5093 3 chr2B.!!$F2 5092
11 TraesCS2D01G254300 chr2A 386056617 386059062 2445 False 780.750000 1243 94.351500 1073 5544 4 chr2A.!!$F3 4471
12 TraesCS2D01G254300 chr2A 386008686 386012004 3318 False 367.333333 837 92.308667 329 1077 3 chr2A.!!$F2 748
13 TraesCS2D01G254300 chr3B 333586689 333587190 501 True 401.000000 401 81.262000 5931 6432 1 chr3B.!!$R3 501
14 TraesCS2D01G254300 chr7B 54049691 54050400 709 False 224.000000 224 99.194000 5716 5839 2 chr7B.!!$F4 123

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
160 164 0.108138 GAGTCAGCGGCTACATTGGT 60.108 55.000 0.26 0.00 0.00 3.67 F
1440 4085 0.388649 CCGTGTGGAAGGAACGAGAG 60.389 60.000 0.00 0.00 39.64 3.20 F
1804 4458 0.456628 GGTGGAGGTACGCTCTTCTC 59.543 60.000 10.11 0.00 0.00 2.87 F
1809 4463 0.626916 AGGTACGCTCTTCTCCTCCT 59.373 55.000 0.00 0.00 0.00 3.69 F
1815 4469 0.746659 GCTCTTCTCCTCCTCTGCTC 59.253 60.000 0.00 0.00 0.00 4.26 F
1816 4470 1.024271 CTCTTCTCCTCCTCTGCTCG 58.976 60.000 0.00 0.00 0.00 5.03 F
1817 4471 1.034838 TCTTCTCCTCCTCTGCTCGC 61.035 60.000 0.00 0.00 0.00 5.03 F
1886 4540 1.075601 AGAAAAGCTCCACATGGGGA 58.924 50.000 17.84 17.84 38.16 4.81 F
1887 4541 1.642762 AGAAAAGCTCCACATGGGGAT 59.357 47.619 19.38 0.75 38.16 3.85 F
1888 4542 1.753073 GAAAAGCTCCACATGGGGATG 59.247 52.381 19.38 12.91 38.16 3.51 F
1917 4571 2.538132 CGAAAAGGGGCGCTTTATTACG 60.538 50.000 26.94 23.10 0.00 3.18 F
4411 7148 3.196901 TGGGTGTAAGTGATCGCAACTAT 59.803 43.478 9.33 0.00 0.00 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 4525 0.257039 GACATCCCCATGTGGAGCTT 59.743 55.000 2.58 0.0 43.79 3.74 R
2649 5309 5.395657 GGAACCTTCATGGGAATGGAAAATC 60.396 44.000 0.00 0.0 41.11 2.17 R
3764 6427 0.956633 GTGACTCGGTATCGCCCATA 59.043 55.000 0.00 0.0 36.13 2.74 R
3858 6521 6.238103 CGTGCTATGATCCATAGTTTCGTTTT 60.238 38.462 13.53 0.0 43.89 2.43 R
4140 6803 8.957466 ACCTATTTGCCTTCTTAATGTTAGTTC 58.043 33.333 0.00 0.0 0.00 3.01 R
4232 6896 3.482436 TGGCCAACTAGAATTGTTTCGT 58.518 40.909 0.61 0.0 36.93 3.85 R
4321 6985 7.386059 TGAGTACTTGATAAGACATCAAAGCA 58.614 34.615 0.00 0.0 37.55 3.91 R
4390 7054 2.094762 AGTTGCGATCACTTACACCC 57.905 50.000 0.00 0.0 0.00 4.61 R
4397 7061 4.159693 TCCAACACTATAGTTGCGATCACT 59.840 41.667 1.56 0.0 45.73 3.41 R
4444 7211 7.234782 TGAATAGAATCCTATACCAACACGGAT 59.765 37.037 0.00 0.0 34.72 4.18 R
4477 7246 1.975407 GGCTGTGGCAGACAAGCAT 60.975 57.895 11.23 0.0 39.71 3.79 R
6355 9744 0.032403 TGGACACAAACGAGTACGGG 59.968 55.000 0.00 0.0 44.46 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.878547 TTTATTCATGATGACAACATAGGCA 57.121 32.000 0.00 0.00 36.82 4.75
33 34 8.467963 TTTATTCATGATGACAACATAGGCAT 57.532 30.769 0.00 0.00 36.82 4.40
34 35 6.570672 ATTCATGATGACAACATAGGCATC 57.429 37.500 0.00 2.90 36.82 3.91
52 53 4.472702 GACTAAGCGTCGTCACCC 57.527 61.111 0.00 0.00 32.04 4.61
146 150 0.787084 AGTGAGGGGAAGAGGAGTCA 59.213 55.000 0.00 0.00 0.00 3.41
148 152 0.616111 TGAGGGGAAGAGGAGTCAGC 60.616 60.000 0.00 0.00 0.00 4.26
155 159 0.612174 AAGAGGAGTCAGCGGCTACA 60.612 55.000 0.26 0.00 0.00 2.74
160 164 0.108138 GAGTCAGCGGCTACATTGGT 60.108 55.000 0.26 0.00 0.00 3.67
179 236 2.288886 GGTGTAGGATTCGTATCTGGCC 60.289 54.545 0.00 0.00 0.00 5.36
205 262 7.202016 ACCACAACACAAGTTATGTCATAAG 57.798 36.000 5.49 0.00 41.46 1.73
243 300 5.527582 TCACTAGCAAAAGAGGAAAGTTGTC 59.472 40.000 0.00 0.00 0.00 3.18
306 363 8.886719 TCATCAGAAACTTATGTGATGTTGATC 58.113 33.333 12.34 0.00 44.41 2.92
355 412 0.401738 CATTGGTGTCTGTGAGGGGT 59.598 55.000 0.00 0.00 0.00 4.95
417 478 4.581824 GCACATACACTCATCCCAATGAAT 59.418 41.667 0.00 0.00 41.33 2.57
418 479 5.506815 GCACATACACTCATCCCAATGAATG 60.507 44.000 0.00 0.00 43.20 2.67
419 480 4.581824 ACATACACTCATCCCAATGAATGC 59.418 41.667 0.00 0.00 41.70 3.56
420 481 3.090210 ACACTCATCCCAATGAATGCA 57.910 42.857 0.00 0.00 41.70 3.96
451 512 6.126652 ACACACCCTTATCTTATGAGCATCTT 60.127 38.462 0.00 0.00 34.92 2.40
455 516 5.866633 CCCTTATCTTATGAGCATCTTCGAC 59.133 44.000 0.00 0.00 34.92 4.20
481 542 4.141846 ACTGAGCCGACACATCATCTTAAT 60.142 41.667 0.00 0.00 0.00 1.40
487 548 7.164122 AGCCGACACATCATCTTAATATTGAT 58.836 34.615 0.00 0.00 0.00 2.57
504 565 1.209128 GATGAAGTCGCCACATACGG 58.791 55.000 0.00 0.00 0.00 4.02
537 598 2.235402 ACGGGTACATTTACTCCCACTG 59.765 50.000 0.00 0.00 39.87 3.66
556 617 1.234821 GAACGCACATCACCCAAAGA 58.765 50.000 0.00 0.00 0.00 2.52
557 618 1.197721 GAACGCACATCACCCAAAGAG 59.802 52.381 0.00 0.00 0.00 2.85
564 625 2.887152 ACATCACCCAAAGAGCTGAAAC 59.113 45.455 0.00 0.00 0.00 2.78
571 632 3.493002 CCCAAAGAGCTGAAACAAATGCA 60.493 43.478 0.00 0.00 0.00 3.96
598 660 2.068519 TGCGAGCATTAGTGTCAAGTG 58.931 47.619 0.00 0.00 0.00 3.16
605 667 6.459710 CGAGCATTAGTGTCAAGTGTAGGATA 60.460 42.308 0.00 0.00 0.00 2.59
608 670 7.069950 AGCATTAGTGTCAAGTGTAGGATATGA 59.930 37.037 0.00 0.00 0.00 2.15
665 727 8.986847 GTACTGTCATGATTGAAGATGAATAGG 58.013 37.037 0.00 0.00 32.48 2.57
681 743 4.219070 TGAATAGGTCGGAAGTTTTCTCGA 59.781 41.667 0.00 0.00 32.61 4.04
682 744 4.796038 ATAGGTCGGAAGTTTTCTCGAA 57.204 40.909 0.00 0.00 35.34 3.71
752 814 4.215613 GTCCTCTTAACCATTCAACCACAC 59.784 45.833 0.00 0.00 0.00 3.82
778 840 7.333423 CGTTGATTCACTTAGTATCCCTTTTCA 59.667 37.037 0.00 0.00 0.00 2.69
819 881 1.227764 CCTAGACATGCGGCATGCT 60.228 57.895 35.80 31.92 44.80 3.79
864 930 3.948473 TCCGTGGTCAACAATTTTTCTCA 59.052 39.130 0.00 0.00 0.00 3.27
872 938 6.405842 GGTCAACAATTTTTCTCAAGTGGAGT 60.406 38.462 0.00 0.00 44.40 3.85
874 940 7.545615 GTCAACAATTTTTCTCAAGTGGAGTTT 59.454 33.333 0.00 0.00 44.40 2.66
890 956 8.463930 AGTGGAGTTTTCAGTTGAATATTTGA 57.536 30.769 0.00 0.00 33.54 2.69
944 1010 8.390921 TGATTTTCTCTTTGGGGTAAGTCTATT 58.609 33.333 0.00 0.00 0.00 1.73
1413 4058 3.199677 CGCAATCCGGTACCATTTCTTA 58.800 45.455 13.54 0.00 0.00 2.10
1426 4071 4.261801 CCATTTCTTACCATTCTCCGTGT 58.738 43.478 0.00 0.00 0.00 4.49
1440 4085 0.388649 CCGTGTGGAAGGAACGAGAG 60.389 60.000 0.00 0.00 39.64 3.20
1787 4440 0.470456 TCAGGAACCACTACCACGGT 60.470 55.000 0.00 0.00 36.98 4.83
1795 4448 0.529378 CACTACCACGGTGGAGGTAC 59.471 60.000 32.72 0.00 40.96 3.34
1804 4458 0.456628 GGTGGAGGTACGCTCTTCTC 59.543 60.000 10.11 0.00 0.00 2.87
1807 4461 1.026584 GGAGGTACGCTCTTCTCCTC 58.973 60.000 10.11 0.00 41.76 3.71
1808 4462 1.026584 GAGGTACGCTCTTCTCCTCC 58.973 60.000 0.00 0.00 38.81 4.30
1809 4463 0.626916 AGGTACGCTCTTCTCCTCCT 59.373 55.000 0.00 0.00 0.00 3.69
1810 4464 1.026584 GGTACGCTCTTCTCCTCCTC 58.973 60.000 0.00 0.00 0.00 3.71
1811 4465 1.409101 GGTACGCTCTTCTCCTCCTCT 60.409 57.143 0.00 0.00 0.00 3.69
1812 4466 1.673920 GTACGCTCTTCTCCTCCTCTG 59.326 57.143 0.00 0.00 0.00 3.35
1813 4467 1.319614 ACGCTCTTCTCCTCCTCTGC 61.320 60.000 0.00 0.00 0.00 4.26
1814 4468 1.037030 CGCTCTTCTCCTCCTCTGCT 61.037 60.000 0.00 0.00 0.00 4.24
1815 4469 0.746659 GCTCTTCTCCTCCTCTGCTC 59.253 60.000 0.00 0.00 0.00 4.26
1816 4470 1.024271 CTCTTCTCCTCCTCTGCTCG 58.976 60.000 0.00 0.00 0.00 5.03
1817 4471 1.034838 TCTTCTCCTCCTCTGCTCGC 61.035 60.000 0.00 0.00 0.00 5.03
1862 4516 9.447279 TCCTATTCTTATTCTTAGATGGTTGGA 57.553 33.333 0.00 0.00 0.00 3.53
1863 4517 9.717942 CCTATTCTTATTCTTAGATGGTTGGAG 57.282 37.037 0.00 0.00 0.00 3.86
1873 4527 9.672673 TTCTTAGATGGTTGGAGAATAGAAAAG 57.327 33.333 0.00 0.00 0.00 2.27
1874 4528 7.770897 TCTTAGATGGTTGGAGAATAGAAAAGC 59.229 37.037 0.00 0.00 0.00 3.51
1875 4529 6.072199 AGATGGTTGGAGAATAGAAAAGCT 57.928 37.500 0.00 0.00 0.00 3.74
1876 4530 6.118852 AGATGGTTGGAGAATAGAAAAGCTC 58.881 40.000 0.00 0.00 0.00 4.09
1877 4531 4.589908 TGGTTGGAGAATAGAAAAGCTCC 58.410 43.478 0.00 0.00 45.59 4.70
1882 4536 5.747951 GGAGAATAGAAAAGCTCCACATG 57.252 43.478 0.00 0.00 44.91 3.21
1883 4537 4.578105 GGAGAATAGAAAAGCTCCACATGG 59.422 45.833 0.00 0.00 44.91 3.66
1884 4538 4.530875 AGAATAGAAAAGCTCCACATGGG 58.469 43.478 0.00 0.00 35.41 4.00
1885 4539 2.806945 TAGAAAAGCTCCACATGGGG 57.193 50.000 8.05 8.05 39.22 4.96
1886 4540 1.075601 AGAAAAGCTCCACATGGGGA 58.924 50.000 17.84 17.84 38.16 4.81
1887 4541 1.642762 AGAAAAGCTCCACATGGGGAT 59.357 47.619 19.38 0.75 38.16 3.85
1888 4542 1.753073 GAAAAGCTCCACATGGGGATG 59.247 52.381 19.38 12.91 38.16 3.51
1917 4571 2.538132 CGAAAAGGGGCGCTTTATTACG 60.538 50.000 26.94 23.10 0.00 3.18
1923 4577 3.374988 AGGGGCGCTTTATTACGTAAAAC 59.625 43.478 12.81 0.00 32.14 2.43
2119 4779 3.905678 CCTCGCCGTAGCCTCCAG 61.906 72.222 0.00 0.00 34.57 3.86
2649 5309 5.568423 GCTCTATACATGGAATCCACTGAGG 60.568 48.000 3.09 0.00 35.80 3.86
2940 5600 7.937700 TCCTTAATTGAGAAGGATCCATAGT 57.062 36.000 15.82 0.00 46.08 2.12
3458 6121 5.060427 TCCCCAAATATGTGATCGGAAAT 57.940 39.130 0.00 0.00 0.00 2.17
3764 6427 6.986817 GCATATCCGCCACTATATTGAATAGT 59.013 38.462 0.00 0.00 35.39 2.12
4140 6803 5.957796 GTCGCAACCTTCGTGAATATTTTAG 59.042 40.000 0.00 0.00 0.00 1.85
4320 6984 5.241728 ACTTCCCAAAAGTGCTGATAGAAAC 59.758 40.000 0.00 0.00 0.00 2.78
4321 6985 4.985538 TCCCAAAAGTGCTGATAGAAACT 58.014 39.130 0.00 0.00 0.00 2.66
4322 6986 4.761739 TCCCAAAAGTGCTGATAGAAACTG 59.238 41.667 0.00 0.00 0.00 3.16
4323 6987 4.479619 CCAAAAGTGCTGATAGAAACTGC 58.520 43.478 0.00 0.00 0.00 4.40
4324 6988 4.217118 CCAAAAGTGCTGATAGAAACTGCT 59.783 41.667 0.00 0.00 34.27 4.24
4325 6989 5.278660 CCAAAAGTGCTGATAGAAACTGCTT 60.279 40.000 0.00 0.00 34.27 3.91
4326 6990 6.211515 CAAAAGTGCTGATAGAAACTGCTTT 58.788 36.000 0.00 0.00 34.27 3.51
4327 6991 5.368256 AAGTGCTGATAGAAACTGCTTTG 57.632 39.130 0.00 0.00 34.27 2.77
4347 7011 7.547019 TGCTTTGATGTCTTATCAAGTACTCAG 59.453 37.037 0.00 0.00 38.98 3.35
4348 7012 7.761704 GCTTTGATGTCTTATCAAGTACTCAGA 59.238 37.037 0.00 0.00 38.98 3.27
4350 7014 7.946381 TGATGTCTTATCAAGTACTCAGACT 57.054 36.000 14.91 6.09 33.28 3.24
4358 7022 8.526667 TTATCAAGTACTCAGACTATCTTGCT 57.473 34.615 0.00 0.00 34.30 3.91
4361 7025 6.209589 TCAAGTACTCAGACTATCTTGCTGTT 59.790 38.462 0.00 0.00 34.30 3.16
4363 7027 6.626302 AGTACTCAGACTATCTTGCTGTTTC 58.374 40.000 0.00 0.00 0.00 2.78
4370 7034 6.016777 CAGACTATCTTGCTGTTTCTGGTTTT 60.017 38.462 0.00 0.00 0.00 2.43
4371 7035 6.205658 AGACTATCTTGCTGTTTCTGGTTTTC 59.794 38.462 0.00 0.00 0.00 2.29
4390 7054 8.610896 TGGTTTTCTAAAAACTGCATTTCAATG 58.389 29.630 13.28 0.00 36.56 2.82
4397 7061 5.543507 AAACTGCATTTCAATGGGTGTAA 57.456 34.783 1.77 0.00 36.90 2.41
4403 7140 5.105797 TGCATTTCAATGGGTGTAAGTGATC 60.106 40.000 1.77 0.00 36.90 2.92
4411 7148 3.196901 TGGGTGTAAGTGATCGCAACTAT 59.803 43.478 9.33 0.00 0.00 2.12
4414 7151 5.451520 GGGTGTAAGTGATCGCAACTATAGT 60.452 44.000 9.33 0.00 0.00 2.12
4415 7152 5.459107 GGTGTAAGTGATCGCAACTATAGTG 59.541 44.000 6.06 2.23 0.00 2.74
4477 7246 8.262601 TGGTATAGGATTCTATTCAGCTTGAA 57.737 34.615 0.00 1.85 41.09 2.69
4518 7287 3.543680 ATGCACCTCGTTGCTAGTTAT 57.456 42.857 0.00 0.00 43.41 1.89
4930 7699 2.112279 AGTGGTACCCCTTTCACTGA 57.888 50.000 10.07 0.00 38.80 3.41
4939 7708 3.077359 CCCCTTTCACTGAGTGACAATC 58.923 50.000 15.94 0.00 42.60 2.67
5001 7770 3.414269 GGGTTGACGTCCCTTTTAATGA 58.586 45.455 14.12 0.00 41.58 2.57
5003 7772 4.082949 GGGTTGACGTCCCTTTTAATGAAG 60.083 45.833 14.12 0.00 41.58 3.02
5067 8095 9.961265 AGCACATATTTCTTCATCATATGTTTG 57.039 29.630 1.90 2.59 40.57 2.93
5093 8121 8.720562 GTGGCATGAGCAAGTTTAAATTTTTAT 58.279 29.630 0.00 0.00 44.61 1.40
5154 8182 5.720371 AGCCTGTAATCTAGCTAGTGATG 57.280 43.478 20.10 7.29 32.73 3.07
5169 8215 5.980116 GCTAGTGATGAATCGATGTGTAACT 59.020 40.000 0.00 3.69 38.04 2.24
5179 8225 9.810545 TGAATCGATGTGTAACTATAACAATGA 57.189 29.630 0.00 0.00 38.04 2.57
5183 8229 9.594478 TCGATGTGTAACTATAACAATGATGTT 57.406 29.630 0.00 0.00 45.04 2.71
5184 8230 9.849607 CGATGTGTAACTATAACAATGATGTTC 57.150 33.333 0.00 0.00 43.14 3.18
5290 8336 5.649782 AATTTCATGATCTTTCGCCTGTT 57.350 34.783 0.00 0.00 0.00 3.16
5299 8345 1.495584 TTTCGCCTGTTGTGTCGCTC 61.496 55.000 0.00 0.00 0.00 5.03
5414 8521 7.967854 CGTTGTATTTGCAGATCCTTTTGAATA 59.032 33.333 0.00 0.00 0.00 1.75
5418 8525 5.824904 TTGCAGATCCTTTTGAATAGAGC 57.175 39.130 0.00 0.00 0.00 4.09
5518 8625 4.499865 GGTTTTCTTCTTGAGTTTGGAGGC 60.500 45.833 0.00 0.00 0.00 4.70
5528 8635 2.229784 GAGTTTGGAGGCTTGGACAATG 59.770 50.000 0.00 0.00 0.00 2.82
5534 8641 0.112995 AGGCTTGGACAATGAGGCAA 59.887 50.000 0.00 0.00 38.33 4.52
5551 8658 2.405892 CAAGTTTTGCTCGGAAGTGG 57.594 50.000 0.00 0.00 0.00 4.00
5552 8659 1.946768 CAAGTTTTGCTCGGAAGTGGA 59.053 47.619 0.00 0.00 0.00 4.02
5553 8660 2.554032 CAAGTTTTGCTCGGAAGTGGAT 59.446 45.455 0.00 0.00 0.00 3.41
5554 8661 2.427506 AGTTTTGCTCGGAAGTGGATC 58.572 47.619 0.00 0.00 0.00 3.36
5555 8662 1.468914 GTTTTGCTCGGAAGTGGATCC 59.531 52.381 4.20 4.20 36.05 3.36
5556 8663 0.984230 TTTGCTCGGAAGTGGATCCT 59.016 50.000 14.23 0.00 37.34 3.24
5557 8664 0.537188 TTGCTCGGAAGTGGATCCTC 59.463 55.000 14.23 9.81 37.34 3.71
5558 8665 0.324738 TGCTCGGAAGTGGATCCTCT 60.325 55.000 14.23 12.34 37.34 3.69
5559 8666 1.063942 TGCTCGGAAGTGGATCCTCTA 60.064 52.381 16.52 0.55 37.34 2.43
5560 8667 2.032620 GCTCGGAAGTGGATCCTCTAA 58.967 52.381 16.52 3.00 37.34 2.10
5561 8668 2.630580 GCTCGGAAGTGGATCCTCTAAT 59.369 50.000 16.52 2.19 37.34 1.73
5562 8669 3.827302 GCTCGGAAGTGGATCCTCTAATA 59.173 47.826 16.52 2.97 37.34 0.98
5563 8670 4.464597 GCTCGGAAGTGGATCCTCTAATAT 59.535 45.833 16.52 1.06 37.34 1.28
5564 8671 5.393678 GCTCGGAAGTGGATCCTCTAATATC 60.394 48.000 16.52 10.16 37.34 1.63
5565 8672 5.641155 TCGGAAGTGGATCCTCTAATATCA 58.359 41.667 16.52 0.00 37.34 2.15
5566 8673 6.075315 TCGGAAGTGGATCCTCTAATATCAA 58.925 40.000 16.52 1.21 37.34 2.57
5567 8674 6.209589 TCGGAAGTGGATCCTCTAATATCAAG 59.790 42.308 16.52 8.57 37.34 3.02
5568 8675 6.209589 CGGAAGTGGATCCTCTAATATCAAGA 59.790 42.308 16.52 0.00 37.34 3.02
5569 8676 7.255977 CGGAAGTGGATCCTCTAATATCAAGAA 60.256 40.741 16.52 0.00 37.34 2.52
5570 8677 8.093927 GGAAGTGGATCCTCTAATATCAAGAAG 58.906 40.741 16.52 0.00 36.50 2.85
5571 8678 8.789767 AAGTGGATCCTCTAATATCAAGAAGA 57.210 34.615 16.52 0.00 0.00 2.87
5572 8679 8.789767 AGTGGATCCTCTAATATCAAGAAGAA 57.210 34.615 14.73 0.00 0.00 2.52
5573 8680 9.218525 AGTGGATCCTCTAATATCAAGAAGAAA 57.781 33.333 14.73 0.00 0.00 2.52
5574 8681 9.838339 GTGGATCCTCTAATATCAAGAAGAAAA 57.162 33.333 14.23 0.00 0.00 2.29
5579 8686 9.877178 TCCTCTAATATCAAGAAGAAAAGTCAC 57.123 33.333 0.00 0.00 0.00 3.67
5580 8687 9.103861 CCTCTAATATCAAGAAGAAAAGTCACC 57.896 37.037 0.00 0.00 0.00 4.02
5581 8688 9.883142 CTCTAATATCAAGAAGAAAAGTCACCT 57.117 33.333 0.00 0.00 0.00 4.00
5584 8691 8.480643 AATATCAAGAAGAAAAGTCACCTACG 57.519 34.615 0.00 0.00 0.00 3.51
5585 8692 4.056050 TCAAGAAGAAAAGTCACCTACGC 58.944 43.478 0.00 0.00 0.00 4.42
5586 8693 4.058817 CAAGAAGAAAAGTCACCTACGCT 58.941 43.478 0.00 0.00 0.00 5.07
5587 8694 5.010314 TCAAGAAGAAAAGTCACCTACGCTA 59.990 40.000 0.00 0.00 0.00 4.26
5588 8695 4.807443 AGAAGAAAAGTCACCTACGCTAC 58.193 43.478 0.00 0.00 0.00 3.58
5589 8696 4.280174 AGAAGAAAAGTCACCTACGCTACA 59.720 41.667 0.00 0.00 0.00 2.74
5590 8697 4.175787 AGAAAAGTCACCTACGCTACAG 57.824 45.455 0.00 0.00 0.00 2.74
5591 8698 3.573110 AGAAAAGTCACCTACGCTACAGT 59.427 43.478 0.00 0.00 0.00 3.55
5592 8699 3.299340 AAAGTCACCTACGCTACAGTG 57.701 47.619 0.00 0.00 0.00 3.66
5593 8700 0.526662 AGTCACCTACGCTACAGTGC 59.473 55.000 0.00 0.00 0.00 4.40
5594 8701 0.242825 GTCACCTACGCTACAGTGCA 59.757 55.000 0.00 0.00 0.00 4.57
5595 8702 0.963225 TCACCTACGCTACAGTGCAA 59.037 50.000 0.00 0.00 0.00 4.08
5596 8703 1.341852 TCACCTACGCTACAGTGCAAA 59.658 47.619 0.00 0.00 0.00 3.68
5597 8704 1.459592 CACCTACGCTACAGTGCAAAC 59.540 52.381 0.00 0.00 0.00 2.93
5598 8705 1.343465 ACCTACGCTACAGTGCAAACT 59.657 47.619 0.00 0.00 0.00 2.66
5599 8706 2.559668 ACCTACGCTACAGTGCAAACTA 59.440 45.455 0.00 0.00 0.00 2.24
5600 8707 3.179830 CCTACGCTACAGTGCAAACTAG 58.820 50.000 0.00 0.00 0.00 2.57
5601 8708 2.814280 ACGCTACAGTGCAAACTAGT 57.186 45.000 0.00 0.00 0.00 2.57
5602 8709 2.404215 ACGCTACAGTGCAAACTAGTG 58.596 47.619 0.00 0.00 0.00 2.74
5603 8710 2.223971 ACGCTACAGTGCAAACTAGTGT 60.224 45.455 0.00 0.00 35.90 3.55
5604 8711 3.005050 ACGCTACAGTGCAAACTAGTGTA 59.995 43.478 0.00 0.78 33.91 2.90
5605 8712 3.985279 CGCTACAGTGCAAACTAGTGTAA 59.015 43.478 0.00 0.00 34.53 2.41
5606 8713 4.446385 CGCTACAGTGCAAACTAGTGTAAA 59.554 41.667 0.00 0.00 34.53 2.01
5607 8714 5.050634 CGCTACAGTGCAAACTAGTGTAAAA 60.051 40.000 0.00 0.00 34.53 1.52
5608 8715 6.134061 GCTACAGTGCAAACTAGTGTAAAAC 58.866 40.000 0.00 0.00 34.53 2.43
5609 8716 6.238266 GCTACAGTGCAAACTAGTGTAAAACA 60.238 38.462 0.00 0.00 34.53 2.83
5610 8717 6.119144 ACAGTGCAAACTAGTGTAAAACAG 57.881 37.500 0.00 0.00 30.29 3.16
5611 8718 5.878116 ACAGTGCAAACTAGTGTAAAACAGA 59.122 36.000 0.00 0.00 30.29 3.41
5612 8719 6.373216 ACAGTGCAAACTAGTGTAAAACAGAA 59.627 34.615 0.00 0.00 30.29 3.02
5613 8720 7.094549 ACAGTGCAAACTAGTGTAAAACAGAAA 60.095 33.333 0.00 0.00 30.29 2.52
5614 8721 7.753132 CAGTGCAAACTAGTGTAAAACAGAAAA 59.247 33.333 0.00 0.00 0.00 2.29
5615 8722 7.968405 AGTGCAAACTAGTGTAAAACAGAAAAG 59.032 33.333 0.00 0.00 0.00 2.27
5616 8723 7.220108 GTGCAAACTAGTGTAAAACAGAAAAGG 59.780 37.037 0.00 0.00 0.00 3.11
5617 8724 7.121463 TGCAAACTAGTGTAAAACAGAAAAGGA 59.879 33.333 0.00 0.00 0.00 3.36
5618 8725 7.971722 GCAAACTAGTGTAAAACAGAAAAGGAA 59.028 33.333 0.00 0.00 0.00 3.36
5619 8726 9.849166 CAAACTAGTGTAAAACAGAAAAGGAAA 57.151 29.630 0.00 0.00 0.00 3.13
5621 8728 8.803397 ACTAGTGTAAAACAGAAAAGGAAAGT 57.197 30.769 0.00 0.00 0.00 2.66
5622 8729 8.890718 ACTAGTGTAAAACAGAAAAGGAAAGTC 58.109 33.333 0.00 0.00 0.00 3.01
5623 8730 7.696992 AGTGTAAAACAGAAAAGGAAAGTCA 57.303 32.000 0.00 0.00 0.00 3.41
5624 8731 7.535997 AGTGTAAAACAGAAAAGGAAAGTCAC 58.464 34.615 0.00 0.00 0.00 3.67
5625 8732 6.468000 GTGTAAAACAGAAAAGGAAAGTCACG 59.532 38.462 0.00 0.00 0.00 4.35
5626 8733 4.632538 AAACAGAAAAGGAAAGTCACGG 57.367 40.909 0.00 0.00 0.00 4.94
5627 8734 2.572290 ACAGAAAAGGAAAGTCACGGG 58.428 47.619 0.00 0.00 0.00 5.28
5628 8735 2.092592 ACAGAAAAGGAAAGTCACGGGT 60.093 45.455 0.00 0.00 0.00 5.28
5629 8736 3.135167 ACAGAAAAGGAAAGTCACGGGTA 59.865 43.478 0.00 0.00 0.00 3.69
5630 8737 3.497262 CAGAAAAGGAAAGTCACGGGTAC 59.503 47.826 0.00 0.00 0.00 3.34
5631 8738 3.390311 AGAAAAGGAAAGTCACGGGTACT 59.610 43.478 0.00 0.00 0.00 2.73
5632 8739 4.590222 AGAAAAGGAAAGTCACGGGTACTA 59.410 41.667 0.00 0.00 0.00 1.82
5633 8740 5.247792 AGAAAAGGAAAGTCACGGGTACTAT 59.752 40.000 0.00 0.00 0.00 2.12
5634 8741 6.438425 AGAAAAGGAAAGTCACGGGTACTATA 59.562 38.462 0.00 0.00 0.00 1.31
5635 8742 5.848833 AAGGAAAGTCACGGGTACTATAG 57.151 43.478 0.00 0.00 0.00 1.31
5636 8743 3.635836 AGGAAAGTCACGGGTACTATAGC 59.364 47.826 0.00 0.00 0.00 2.97
5637 8744 3.382546 GGAAAGTCACGGGTACTATAGCA 59.617 47.826 0.00 0.00 0.00 3.49
5638 8745 4.142093 GGAAAGTCACGGGTACTATAGCAA 60.142 45.833 0.00 0.00 0.00 3.91
5639 8746 5.410355 AAAGTCACGGGTACTATAGCAAA 57.590 39.130 0.00 0.00 0.00 3.68
5640 8747 4.382345 AGTCACGGGTACTATAGCAAAC 57.618 45.455 0.00 0.00 0.00 2.93
5641 8748 3.765511 AGTCACGGGTACTATAGCAAACA 59.234 43.478 0.00 0.00 0.00 2.83
5642 8749 3.861689 GTCACGGGTACTATAGCAAACAC 59.138 47.826 0.00 0.00 0.00 3.32
5643 8750 3.765511 TCACGGGTACTATAGCAAACACT 59.234 43.478 0.00 0.00 0.00 3.55
5644 8751 3.863424 CACGGGTACTATAGCAAACACTG 59.137 47.826 0.00 0.00 0.00 3.66
5645 8752 3.512724 ACGGGTACTATAGCAAACACTGT 59.487 43.478 0.00 0.00 0.00 3.55
5646 8753 4.706476 ACGGGTACTATAGCAAACACTGTA 59.294 41.667 0.00 0.00 0.00 2.74
5647 8754 5.361857 ACGGGTACTATAGCAAACACTGTAT 59.638 40.000 0.00 0.00 0.00 2.29
5648 8755 6.127253 ACGGGTACTATAGCAAACACTGTATT 60.127 38.462 0.00 0.00 0.00 1.89
5649 8756 6.759827 CGGGTACTATAGCAAACACTGTATTT 59.240 38.462 0.00 0.00 0.00 1.40
5650 8757 7.922278 CGGGTACTATAGCAAACACTGTATTTA 59.078 37.037 0.00 0.00 0.00 1.40
5651 8758 9.774413 GGGTACTATAGCAAACACTGTATTTAT 57.226 33.333 0.00 0.00 0.00 1.40
5660 8767 9.938280 AGCAAACACTGTATTTATCTACTGTAA 57.062 29.630 0.00 0.00 33.59 2.41
5661 8768 9.968743 GCAAACACTGTATTTATCTACTGTAAC 57.031 33.333 0.00 0.00 33.59 2.50
5664 8771 9.871238 AACACTGTATTTATCTACTGTAACAGG 57.129 33.333 14.53 8.42 37.89 4.00
5665 8772 9.032624 ACACTGTATTTATCTACTGTAACAGGT 57.967 33.333 14.53 8.86 37.89 4.00
5675 8782 7.764141 TCTACTGTAACAGGTATTGTACACA 57.236 36.000 0.00 0.00 39.73 3.72
5680 8787 8.236084 CTGTAACAGGTATTGTACACAGTTAC 57.764 38.462 16.28 16.28 42.43 2.50
5681 8788 7.954835 TGTAACAGGTATTGTACACAGTTACT 58.045 34.615 20.34 5.25 39.73 2.24
5682 8789 7.868922 TGTAACAGGTATTGTACACAGTTACTG 59.131 37.037 20.34 11.21 39.73 2.74
5683 8790 6.415206 ACAGGTATTGTACACAGTTACTGT 57.585 37.500 12.76 12.76 41.17 3.55
5684 8791 6.823497 ACAGGTATTGTACACAGTTACTGTT 58.177 36.000 16.06 9.87 39.56 3.16
5685 8792 6.927381 ACAGGTATTGTACACAGTTACTGTTC 59.073 38.462 16.06 9.73 39.56 3.18
5686 8793 7.152645 CAGGTATTGTACACAGTTACTGTTCT 58.847 38.462 16.06 6.48 42.59 3.01
5687 8794 8.301720 CAGGTATTGTACACAGTTACTGTTCTA 58.698 37.037 16.06 5.49 42.59 2.10
5688 8795 8.521176 AGGTATTGTACACAGTTACTGTTCTAG 58.479 37.037 16.06 7.13 42.59 2.43
5689 8796 8.517878 GGTATTGTACACAGTTACTGTTCTAGA 58.482 37.037 16.06 4.21 42.59 2.43
5695 8802 9.570488 GTACACAGTTACTGTTCTAGATTAAGG 57.430 37.037 16.06 2.59 42.59 2.69
5696 8803 8.191534 ACACAGTTACTGTTCTAGATTAAGGT 57.808 34.615 16.06 3.22 42.59 3.50
5697 8804 9.305555 ACACAGTTACTGTTCTAGATTAAGGTA 57.694 33.333 16.06 0.00 42.59 3.08
5698 8805 9.570488 CACAGTTACTGTTCTAGATTAAGGTAC 57.430 37.037 16.06 0.00 42.59 3.34
5699 8806 9.305555 ACAGTTACTGTTCTAGATTAAGGTACA 57.694 33.333 12.76 0.00 42.59 2.90
5705 8812 9.668497 ACTGTTCTAGATTAAGGTACAAAATCC 57.332 33.333 0.00 0.00 33.88 3.01
5706 8813 9.110502 CTGTTCTAGATTAAGGTACAAAATCCC 57.889 37.037 0.00 0.00 33.88 3.85
5707 8814 8.832735 TGTTCTAGATTAAGGTACAAAATCCCT 58.167 33.333 0.00 0.00 33.88 4.20
5708 8815 9.682465 GTTCTAGATTAAGGTACAAAATCCCTT 57.318 33.333 0.00 0.00 41.38 3.95
5714 8821 9.557061 GATTAAGGTACAAAATCCCTTACTAGG 57.443 37.037 0.00 0.00 39.82 3.02
5811 8918 0.114954 TCAATTGGCTGGCTTCCCTT 59.885 50.000 5.42 0.00 0.00 3.95
5840 8947 2.262915 GTGTCGCCACCTCTCCTG 59.737 66.667 0.00 0.00 35.44 3.86
5841 8948 2.203640 TGTCGCCACCTCTCCTGT 60.204 61.111 0.00 0.00 0.00 4.00
5842 8949 1.837051 TGTCGCCACCTCTCCTGTT 60.837 57.895 0.00 0.00 0.00 3.16
5843 8950 1.374758 GTCGCCACCTCTCCTGTTG 60.375 63.158 0.00 0.00 0.00 3.33
5844 8951 1.533033 TCGCCACCTCTCCTGTTGA 60.533 57.895 0.00 0.00 0.00 3.18
5845 8952 0.904865 TCGCCACCTCTCCTGTTGAT 60.905 55.000 0.00 0.00 0.00 2.57
5846 8953 0.824109 CGCCACCTCTCCTGTTGATA 59.176 55.000 0.00 0.00 0.00 2.15
5847 8954 1.414181 CGCCACCTCTCCTGTTGATAT 59.586 52.381 0.00 0.00 0.00 1.63
5850 8957 4.442893 CGCCACCTCTCCTGTTGATATAAA 60.443 45.833 0.00 0.00 0.00 1.40
5851 8958 5.625150 GCCACCTCTCCTGTTGATATAAAT 58.375 41.667 0.00 0.00 0.00 1.40
5853 8960 7.224297 GCCACCTCTCCTGTTGATATAAATAA 58.776 38.462 0.00 0.00 0.00 1.40
5854 8961 7.719633 GCCACCTCTCCTGTTGATATAAATAAA 59.280 37.037 0.00 0.00 0.00 1.40
5855 8962 9.799106 CCACCTCTCCTGTTGATATAAATAAAT 57.201 33.333 0.00 0.00 0.00 1.40
5972 9105 5.192522 ACAAGAAGGATGGACATTGGAGTAT 59.807 40.000 0.00 0.00 0.00 2.12
5981 9114 2.283298 ACATTGGAGTATGAGCAAGCG 58.717 47.619 0.00 0.00 0.00 4.68
5988 9121 1.759445 AGTATGAGCAAGCGTGGAGAT 59.241 47.619 0.79 0.00 0.00 2.75
5991 9124 0.321346 TGAGCAAGCGTGGAGATGAA 59.679 50.000 0.79 0.00 0.00 2.57
5995 9128 0.392193 CAAGCGTGGAGATGAAGGCT 60.392 55.000 0.00 0.00 39.08 4.58
6000 9133 0.247736 GTGGAGATGAAGGCTCACGT 59.752 55.000 0.00 0.00 33.30 4.49
6003 9136 1.066858 GGAGATGAAGGCTCACGTGAA 60.067 52.381 20.49 3.48 33.30 3.18
6009 9339 0.472471 AAGGCTCACGTGAAGGGAAA 59.528 50.000 20.49 0.00 0.00 3.13
6012 9342 1.266989 GGCTCACGTGAAGGGAAAAAG 59.733 52.381 20.49 5.50 0.00 2.27
6015 9345 3.548214 GCTCACGTGAAGGGAAAAAGAAC 60.548 47.826 20.49 0.00 0.00 3.01
6041 9371 0.400213 TCCGGTGGAGTTTTCAGCAT 59.600 50.000 0.00 0.00 33.34 3.79
6046 9376 3.490761 CGGTGGAGTTTTCAGCATTTTGT 60.491 43.478 0.00 0.00 33.34 2.83
6052 9389 5.473039 GAGTTTTCAGCATTTTGTAGCCAT 58.527 37.500 0.00 0.00 0.00 4.40
6061 9398 4.980434 GCATTTTGTAGCCATCATGATGAC 59.020 41.667 32.71 23.76 41.20 3.06
6074 9411 7.201705 GCCATCATGATGACATATAAGGACATG 60.202 40.741 32.71 13.56 41.20 3.21
6077 9414 7.389232 TCATGATGACATATAAGGACATGGAC 58.611 38.462 0.00 0.00 35.89 4.02
6080 9417 5.453567 TGACATATAAGGACATGGACGAG 57.546 43.478 0.00 0.00 0.00 4.18
6086 9423 8.904834 ACATATAAGGACATGGACGAGATATAC 58.095 37.037 0.00 0.00 0.00 1.47
6087 9424 6.777213 ATAAGGACATGGACGAGATATACC 57.223 41.667 0.00 0.00 0.00 2.73
6089 9426 4.678256 AGGACATGGACGAGATATACCAT 58.322 43.478 0.00 0.00 42.83 3.55
6093 9430 6.321435 GGACATGGACGAGATATACCATATGA 59.679 42.308 3.65 0.00 40.55 2.15
6155 9543 2.256306 CACCTTATTTTTGGGCCAGGT 58.744 47.619 6.23 5.85 34.86 4.00
6160 9548 2.938428 ATTTTTGGGCCAGGTCCATA 57.062 45.000 15.58 6.32 37.08 2.74
6168 9556 5.671463 TGGGCCAGGTCCATATAATTTTA 57.329 39.130 9.47 0.00 29.54 1.52
6174 9562 9.923143 GGCCAGGTCCATATAATTTTAAAATAC 57.077 33.333 13.68 6.54 0.00 1.89
6175 9563 9.620660 GCCAGGTCCATATAATTTTAAAATACG 57.379 33.333 13.68 1.92 0.00 3.06
6200 9588 7.095187 CGTTTTCATAGGCTGTTTTTAGAGTCT 60.095 37.037 0.00 0.00 0.00 3.24
6206 9594 9.817809 CATAGGCTGTTTTTAGAGTCTGTATTA 57.182 33.333 1.86 0.00 0.00 0.98
6224 9612 6.278363 TGTATTATAGGGAAAACGACTCAGC 58.722 40.000 0.00 0.00 0.00 4.26
6237 9625 2.476619 CGACTCAGCAGGTGTTTTAGTG 59.523 50.000 0.00 0.00 0.00 2.74
6247 9635 1.681264 GTGTTTTAGTGCCACCTTGCT 59.319 47.619 0.00 0.00 0.00 3.91
6264 9652 4.530875 CTTGCTAAGGGTGGATGAAATCT 58.469 43.478 0.00 0.00 44.71 2.40
6290 9679 6.183361 CCTCCCTTTTCCCTATAAATACAGCT 60.183 42.308 0.00 0.00 0.00 4.24
6291 9680 7.220890 TCCCTTTTCCCTATAAATACAGCTT 57.779 36.000 0.00 0.00 0.00 3.74
6292 9681 8.339720 TCCCTTTTCCCTATAAATACAGCTTA 57.660 34.615 0.00 0.00 0.00 3.09
6293 9682 8.783903 TCCCTTTTCCCTATAAATACAGCTTAA 58.216 33.333 0.00 0.00 0.00 1.85
6294 9683 9.067986 CCCTTTTCCCTATAAATACAGCTTAAG 57.932 37.037 0.00 0.00 0.00 1.85
6339 9728 9.516314 ACTTGAGTTTTGTTTAGATTAAAGTGC 57.484 29.630 0.00 0.00 0.00 4.40
6340 9729 8.555166 TTGAGTTTTGTTTAGATTAAAGTGCG 57.445 30.769 0.00 0.00 0.00 5.34
6341 9730 6.635239 TGAGTTTTGTTTAGATTAAAGTGCGC 59.365 34.615 0.00 0.00 0.00 6.09
6342 9731 5.918576 AGTTTTGTTTAGATTAAAGTGCGCC 59.081 36.000 4.18 0.00 0.00 6.53
6343 9732 3.733024 TGTTTAGATTAAAGTGCGCCG 57.267 42.857 4.18 0.00 0.00 6.46
6344 9733 3.068560 TGTTTAGATTAAAGTGCGCCGT 58.931 40.909 4.18 0.00 0.00 5.68
6345 9734 4.244066 TGTTTAGATTAAAGTGCGCCGTA 58.756 39.130 4.18 0.00 0.00 4.02
6346 9735 4.327898 TGTTTAGATTAAAGTGCGCCGTAG 59.672 41.667 4.18 0.00 0.00 3.51
6347 9736 2.667473 AGATTAAAGTGCGCCGTAGT 57.333 45.000 4.18 0.00 0.00 2.73
6348 9737 2.968675 AGATTAAAGTGCGCCGTAGTT 58.031 42.857 4.18 0.00 0.00 2.24
6349 9738 2.671396 AGATTAAAGTGCGCCGTAGTTG 59.329 45.455 4.18 0.00 0.00 3.16
6350 9739 0.513820 TTAAAGTGCGCCGTAGTTGC 59.486 50.000 4.18 0.00 0.00 4.17
6351 9740 0.600518 TAAAGTGCGCCGTAGTTGCA 60.601 50.000 4.18 0.00 36.02 4.08
6353 9742 2.113131 AAGTGCGCCGTAGTTGCAAC 62.113 55.000 22.17 22.17 40.83 4.17
6354 9743 2.280524 TGCGCCGTAGTTGCAACT 60.281 55.556 32.97 32.97 42.91 3.16
6355 9744 2.314647 TGCGCCGTAGTTGCAACTC 61.315 57.895 34.29 23.07 40.37 3.01
6356 9745 3.023591 GCGCCGTAGTTGCAACTCC 62.024 63.158 34.29 23.08 40.37 3.85
6357 9746 2.388232 CGCCGTAGTTGCAACTCCC 61.388 63.158 34.29 23.70 40.37 4.30
6359 9748 1.005394 CCGTAGTTGCAACTCCCGT 60.005 57.895 34.29 14.22 40.37 5.28
6361 9750 1.343506 CGTAGTTGCAACTCCCGTAC 58.656 55.000 34.29 24.14 40.37 3.67
6372 9764 1.000938 ACTCCCGTACTCGTTTGTGTC 60.001 52.381 0.00 0.00 35.01 3.67
6374 9766 0.032403 CCCGTACTCGTTTGTGTCCA 59.968 55.000 0.00 0.00 35.01 4.02
6377 9769 2.195096 CGTACTCGTTTGTGTCCAACA 58.805 47.619 0.00 0.00 36.85 3.33
6391 9783 2.054799 TCCAACAACTAGGCCAAGACT 58.945 47.619 5.01 0.00 0.00 3.24
6393 9785 3.117663 TCCAACAACTAGGCCAAGACTTT 60.118 43.478 5.01 0.00 0.00 2.66
6394 9786 3.253432 CCAACAACTAGGCCAAGACTTTC 59.747 47.826 5.01 0.00 0.00 2.62
6395 9787 3.141767 ACAACTAGGCCAAGACTTTCC 57.858 47.619 5.01 0.00 0.00 3.13
6405 9797 2.230660 CAAGACTTTCCAGAACCCCAC 58.769 52.381 0.00 0.00 0.00 4.61
6412 9804 2.879103 TCCAGAACCCCACTTTCATC 57.121 50.000 0.00 0.00 0.00 2.92
6419 9811 6.155049 CCAGAACCCCACTTTCATCAATAAAT 59.845 38.462 0.00 0.00 0.00 1.40
6422 9814 7.340487 AGAACCCCACTTTCATCAATAAATCTC 59.660 37.037 0.00 0.00 0.00 2.75
6423 9815 6.493166 ACCCCACTTTCATCAATAAATCTCA 58.507 36.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 9.460906 GTGTCTAGGTATAGGATTAGTTTTTCG 57.539 37.037 0.00 0.00 0.00 3.46
79 80 2.102588 GGAGCCCGCTTTCTTCTATACA 59.897 50.000 0.00 0.00 0.00 2.29
118 119 0.984230 TTCCCCTCACTCATCGCTTT 59.016 50.000 0.00 0.00 0.00 3.51
119 120 0.539051 CTTCCCCTCACTCATCGCTT 59.461 55.000 0.00 0.00 0.00 4.68
130 134 1.671901 CGCTGACTCCTCTTCCCCTC 61.672 65.000 0.00 0.00 0.00 4.30
131 135 1.684049 CGCTGACTCCTCTTCCCCT 60.684 63.158 0.00 0.00 0.00 4.79
155 159 4.503296 GCCAGATACGAATCCTACACCAAT 60.503 45.833 0.00 0.00 31.98 3.16
160 164 2.958818 AGGCCAGATACGAATCCTACA 58.041 47.619 5.01 0.00 31.98 2.74
174 231 3.746114 TAACTTGTGTTGTGGTAGGCCAG 60.746 47.826 5.01 0.00 40.35 4.85
179 236 6.801539 ATGACATAACTTGTGTTGTGGTAG 57.198 37.500 9.67 0.00 45.56 3.18
205 262 3.729966 GCTAGTGAAGCCTTGTATACCC 58.270 50.000 0.00 0.00 46.25 3.69
243 300 1.519234 TGTTATGCGCTGCCTCTCG 60.519 57.895 9.73 0.00 0.00 4.04
284 341 7.961283 CACAGATCAACATCACATAAGTTTCTG 59.039 37.037 0.00 0.00 36.72 3.02
306 363 1.059692 CGAAGCAGAACATACGCACAG 59.940 52.381 0.00 0.00 0.00 3.66
417 478 2.595009 TAAGGGTGTGTGTGCGTGCA 62.595 55.000 0.00 0.00 0.00 4.57
418 479 1.234615 ATAAGGGTGTGTGTGCGTGC 61.235 55.000 0.00 0.00 0.00 5.34
419 480 0.796312 GATAAGGGTGTGTGTGCGTG 59.204 55.000 0.00 0.00 0.00 5.34
420 481 0.685097 AGATAAGGGTGTGTGTGCGT 59.315 50.000 0.00 0.00 0.00 5.24
451 512 0.596600 GTGTCGGCTCAGTTTGTCGA 60.597 55.000 0.00 0.00 0.00 4.20
455 516 1.511850 TGATGTGTCGGCTCAGTTTG 58.488 50.000 0.00 0.00 0.00 2.93
481 542 4.048504 CGTATGTGGCGACTTCATCAATA 58.951 43.478 0.00 0.00 0.00 1.90
487 548 1.447140 GCCGTATGTGGCGACTTCA 60.447 57.895 0.00 0.00 46.75 3.02
514 575 1.477700 TGGGAGTAAATGTACCCGTCG 59.522 52.381 0.00 0.00 44.70 5.12
537 598 1.197721 CTCTTTGGGTGATGTGCGTTC 59.802 52.381 0.00 0.00 0.00 3.95
556 617 4.405116 TTTTCCTGCATTTGTTTCAGCT 57.595 36.364 0.00 0.00 0.00 4.24
557 618 4.612033 GCATTTTCCTGCATTTGTTTCAGC 60.612 41.667 0.00 0.00 41.87 4.26
564 625 1.657094 GCTCGCATTTTCCTGCATTTG 59.343 47.619 0.00 0.00 42.40 2.32
571 632 3.347216 ACACTAATGCTCGCATTTTCCT 58.653 40.909 20.69 0.71 43.32 3.36
632 694 6.873605 TCTTCAATCATGACAGTACAACGAAT 59.126 34.615 0.00 0.00 34.61 3.34
716 778 6.829298 TGGTTAAGAGGACAGTAGTATCTCTG 59.171 42.308 0.00 0.00 38.02 3.35
719 781 7.839705 TGAATGGTTAAGAGGACAGTAGTATCT 59.160 37.037 0.00 0.00 0.00 1.98
752 814 7.333423 TGAAAAGGGATACTAAGTGAATCAACG 59.667 37.037 0.00 0.00 0.00 4.10
778 840 6.497259 AGGGAGTATACAATGTATCGACCATT 59.503 38.462 9.43 6.37 32.88 3.16
819 881 1.173444 AACAAAATGGGCGCACGGTA 61.173 50.000 10.83 0.00 0.00 4.02
864 930 8.912988 TCAAATATTCAACTGAAAACTCCACTT 58.087 29.630 0.00 0.00 37.61 3.16
952 1018 7.920682 CCATCAAATATAAACTTGCCCTGTTAC 59.079 37.037 0.00 0.00 0.00 2.50
1413 4058 0.324943 CCTTCCACACGGAGAATGGT 59.675 55.000 0.00 0.00 44.10 3.55
1426 4071 3.231818 AGAACTTCTCTCGTTCCTTCCA 58.768 45.455 0.00 0.00 41.19 3.53
1440 4085 5.704978 AGCAAGAAATCAGAGGAAGAACTTC 59.295 40.000 6.06 6.06 38.80 3.01
1497 4150 4.705519 CGGCAAAGGCAACGGCAG 62.706 66.667 0.00 0.00 43.71 4.85
1500 4153 3.737172 CTCCGGCAAAGGCAACGG 61.737 66.667 0.00 0.00 43.53 4.44
1501 4154 1.982073 GATCTCCGGCAAAGGCAACG 61.982 60.000 0.00 0.00 43.71 4.10
1502 4155 1.803289 GATCTCCGGCAAAGGCAAC 59.197 57.895 0.00 0.00 43.71 4.17
1503 4156 1.745115 CGATCTCCGGCAAAGGCAA 60.745 57.895 0.00 0.00 43.71 4.52
1504 4157 2.125147 CGATCTCCGGCAAAGGCA 60.125 61.111 0.00 0.00 43.71 4.75
1505 4158 3.577313 GCGATCTCCGGCAAAGGC 61.577 66.667 0.00 0.00 39.04 4.35
1506 4159 3.264897 CGCGATCTCCGGCAAAGG 61.265 66.667 0.00 0.00 39.04 3.11
1507 4160 3.264897 CCGCGATCTCCGGCAAAG 61.265 66.667 8.23 0.00 39.22 2.77
1787 4440 0.331954 AGGAGAAGAGCGTACCTCCA 59.668 55.000 13.88 0.00 45.73 3.86
1790 4443 0.626916 AGGAGGAGAAGAGCGTACCT 59.373 55.000 0.00 0.00 0.00 3.08
1795 4448 1.037030 AGCAGAGGAGGAGAAGAGCG 61.037 60.000 0.00 0.00 0.00 5.03
1804 4458 1.447489 CTTGTGCGAGCAGAGGAGG 60.447 63.158 0.00 0.00 0.00 4.30
1807 4461 1.287730 GACACTTGTGCGAGCAGAGG 61.288 60.000 0.00 0.00 0.00 3.69
1808 4462 0.598419 TGACACTTGTGCGAGCAGAG 60.598 55.000 0.00 2.50 0.00 3.35
1809 4463 0.875908 GTGACACTTGTGCGAGCAGA 60.876 55.000 0.00 0.00 0.00 4.26
1810 4464 0.877649 AGTGACACTTGTGCGAGCAG 60.878 55.000 1.07 0.00 0.00 4.24
1811 4465 1.143838 AGTGACACTTGTGCGAGCA 59.856 52.632 1.07 0.00 0.00 4.26
1812 4466 0.875908 TCAGTGACACTTGTGCGAGC 60.876 55.000 5.04 0.00 0.00 5.03
1813 4467 0.855349 GTCAGTGACACTTGTGCGAG 59.145 55.000 18.54 0.00 32.09 5.03
1814 4468 0.459899 AGTCAGTGACACTTGTGCGA 59.540 50.000 24.73 0.00 34.60 5.10
1815 4469 2.054363 CTAGTCAGTGACACTTGTGCG 58.946 52.381 24.73 0.00 34.60 5.34
1816 4470 3.053455 GACTAGTCAGTGACACTTGTGC 58.947 50.000 24.73 4.20 34.21 4.57
1817 4471 3.319405 AGGACTAGTCAGTGACACTTGTG 59.681 47.826 24.73 10.04 34.21 3.33
1862 4516 4.530875 CCCATGTGGAGCTTTTCTATTCT 58.469 43.478 0.00 0.00 37.39 2.40
1863 4517 3.633986 CCCCATGTGGAGCTTTTCTATTC 59.366 47.826 0.00 0.00 37.39 1.75
1864 4518 3.269381 TCCCCATGTGGAGCTTTTCTATT 59.731 43.478 0.00 0.00 37.39 1.73
1865 4519 2.852449 TCCCCATGTGGAGCTTTTCTAT 59.148 45.455 0.00 0.00 37.39 1.98
1866 4520 2.274542 TCCCCATGTGGAGCTTTTCTA 58.725 47.619 0.00 0.00 37.39 2.10
1867 4521 1.075601 TCCCCATGTGGAGCTTTTCT 58.924 50.000 0.00 0.00 37.39 2.52
1868 4522 1.753073 CATCCCCATGTGGAGCTTTTC 59.247 52.381 2.58 0.00 37.96 2.29
1869 4523 1.077663 ACATCCCCATGTGGAGCTTTT 59.922 47.619 2.58 0.00 42.05 2.27
1870 4524 0.706433 ACATCCCCATGTGGAGCTTT 59.294 50.000 2.58 0.00 42.05 3.51
1871 4525 0.257039 GACATCCCCATGTGGAGCTT 59.743 55.000 2.58 0.00 43.79 3.74
1872 4526 0.622738 AGACATCCCCATGTGGAGCT 60.623 55.000 2.58 0.00 43.79 4.09
1873 4527 0.257039 AAGACATCCCCATGTGGAGC 59.743 55.000 2.58 0.00 43.79 4.70
1874 4528 2.814805 AAAGACATCCCCATGTGGAG 57.185 50.000 2.58 0.00 43.79 3.86
1875 4529 3.430453 GAAAAAGACATCCCCATGTGGA 58.570 45.455 0.00 0.00 43.79 4.02
1876 4530 2.164219 CGAAAAAGACATCCCCATGTGG 59.836 50.000 0.00 0.00 43.79 4.17
1877 4531 3.081061 TCGAAAAAGACATCCCCATGTG 58.919 45.455 0.00 0.00 43.79 3.21
1878 4532 3.433306 TCGAAAAAGACATCCCCATGT 57.567 42.857 0.00 0.00 46.64 3.21
1879 4533 4.782019 TTTCGAAAAAGACATCCCCATG 57.218 40.909 8.44 0.00 35.92 3.66
1880 4534 4.220602 CCTTTTCGAAAAAGACATCCCCAT 59.779 41.667 22.67 0.00 0.00 4.00
1881 4535 3.572255 CCTTTTCGAAAAAGACATCCCCA 59.428 43.478 22.67 0.00 0.00 4.96
1882 4536 3.056821 CCCTTTTCGAAAAAGACATCCCC 60.057 47.826 22.67 0.00 0.00 4.81
1883 4537 3.056821 CCCCTTTTCGAAAAAGACATCCC 60.057 47.826 22.67 0.00 0.00 3.85
1884 4538 3.614150 GCCCCTTTTCGAAAAAGACATCC 60.614 47.826 22.67 5.84 0.00 3.51
1885 4539 3.575630 GCCCCTTTTCGAAAAAGACATC 58.424 45.455 22.67 7.84 0.00 3.06
1886 4540 2.030274 CGCCCCTTTTCGAAAAAGACAT 60.030 45.455 22.67 0.00 0.00 3.06
1887 4541 1.335496 CGCCCCTTTTCGAAAAAGACA 59.665 47.619 22.67 2.00 0.00 3.41
1888 4542 1.929038 GCGCCCCTTTTCGAAAAAGAC 60.929 52.381 22.67 11.98 0.00 3.01
1917 4571 6.528774 CCGGGTGTAATGCTTAAATGTTTTAC 59.471 38.462 0.00 0.00 0.00 2.01
1923 4577 2.223711 GGCCGGGTGTAATGCTTAAATG 60.224 50.000 2.18 0.00 0.00 2.32
2649 5309 5.395657 GGAACCTTCATGGGAATGGAAAATC 60.396 44.000 0.00 0.00 41.11 2.17
2754 5414 9.506018 TGTGACATTCAGAAGAGATTTAATTGA 57.494 29.630 0.00 0.00 0.00 2.57
3458 6121 2.283821 GGATGCAGGTTGGGCCAA 60.284 61.111 16.66 16.66 40.61 4.52
3764 6427 0.956633 GTGACTCGGTATCGCCCATA 59.043 55.000 0.00 0.00 36.13 2.74
3858 6521 6.238103 CGTGCTATGATCCATAGTTTCGTTTT 60.238 38.462 13.53 0.00 43.89 2.43
4140 6803 8.957466 ACCTATTTGCCTTCTTAATGTTAGTTC 58.043 33.333 0.00 0.00 0.00 3.01
4232 6896 3.482436 TGGCCAACTAGAATTGTTTCGT 58.518 40.909 0.61 0.00 36.93 3.85
4320 6984 7.547019 TGAGTACTTGATAAGACATCAAAGCAG 59.453 37.037 0.00 0.00 37.55 4.24
4321 6985 7.386059 TGAGTACTTGATAAGACATCAAAGCA 58.614 34.615 0.00 0.00 37.55 3.91
4322 6986 7.761704 TCTGAGTACTTGATAAGACATCAAAGC 59.238 37.037 0.00 0.00 37.55 3.51
4323 6987 9.081997 GTCTGAGTACTTGATAAGACATCAAAG 57.918 37.037 0.00 0.00 37.55 2.77
4324 6988 8.807118 AGTCTGAGTACTTGATAAGACATCAAA 58.193 33.333 17.99 0.00 37.55 2.69
4325 6989 8.354711 AGTCTGAGTACTTGATAAGACATCAA 57.645 34.615 17.99 0.22 37.18 2.57
4326 6990 7.946381 AGTCTGAGTACTTGATAAGACATCA 57.054 36.000 17.99 1.46 37.18 3.07
4347 7011 5.948992 AAACCAGAAACAGCAAGATAGTC 57.051 39.130 0.00 0.00 0.00 2.59
4348 7012 6.064717 AGAAAACCAGAAACAGCAAGATAGT 58.935 36.000 0.00 0.00 0.00 2.12
4350 7014 8.458573 TTTAGAAAACCAGAAACAGCAAGATA 57.541 30.769 0.00 0.00 0.00 1.98
4358 7022 6.692486 TGCAGTTTTTAGAAAACCAGAAACA 58.308 32.000 11.46 1.49 31.36 2.83
4361 7025 8.037758 TGAAATGCAGTTTTTAGAAAACCAGAA 58.962 29.630 0.00 2.26 0.00 3.02
4363 7027 7.769272 TGAAATGCAGTTTTTAGAAAACCAG 57.231 32.000 0.00 7.13 0.00 4.00
4370 7034 6.183360 ACACCCATTGAAATGCAGTTTTTAGA 60.183 34.615 0.00 0.00 35.08 2.10
4371 7035 5.990996 ACACCCATTGAAATGCAGTTTTTAG 59.009 36.000 0.00 0.00 35.08 1.85
4390 7054 2.094762 AGTTGCGATCACTTACACCC 57.905 50.000 0.00 0.00 0.00 4.61
4397 7061 4.159693 TCCAACACTATAGTTGCGATCACT 59.840 41.667 1.56 0.00 45.73 3.41
4444 7211 7.234782 TGAATAGAATCCTATACCAACACGGAT 59.765 37.037 0.00 0.00 34.72 4.18
4477 7246 1.975407 GGCTGTGGCAGACAAGCAT 60.975 57.895 11.23 0.00 39.71 3.79
4518 7287 9.350357 GTTATTCAAAGTGTCGTATTCTAGTGA 57.650 33.333 0.00 0.00 0.00 3.41
4529 7298 5.451908 ACAAGCATGTTATTCAAAGTGTCG 58.548 37.500 0.00 0.00 35.91 4.35
4930 7699 0.815734 CCGACTACCCGATTGTCACT 59.184 55.000 0.00 0.00 33.13 3.41
4939 7708 2.417516 CCTGCATCCGACTACCCG 59.582 66.667 0.00 0.00 0.00 5.28
5067 8095 6.544038 AAAATTTAAACTTGCTCATGCCAC 57.456 33.333 0.00 0.00 38.71 5.01
5117 8145 1.669779 CAGGCTAGCATGTTCTTCAGC 59.330 52.381 20.93 0.00 0.00 4.26
5149 8177 9.244799 TGTTATAGTTACACATCGATTCATCAC 57.755 33.333 0.00 0.00 0.00 3.06
5169 8215 7.503230 AGTGCATGGATGAACATCATTGTTATA 59.497 33.333 15.22 1.34 46.01 0.98
5179 8225 1.402968 GCGAAGTGCATGGATGAACAT 59.597 47.619 0.52 0.00 45.45 2.71
5237 8283 2.880890 GCCGAGGCACTGATCAAAATAT 59.119 45.455 9.58 0.00 41.55 1.28
5240 8286 1.298157 CGCCGAGGCACTGATCAAAA 61.298 55.000 15.03 0.00 41.55 2.44
5263 8309 7.094205 ACAGGCGAAAGATCATGAAATTAAGTT 60.094 33.333 0.00 0.00 0.00 2.66
5290 8336 3.124560 TGAAAATACAACGAGCGACACA 58.875 40.909 0.00 0.00 0.00 3.72
5299 8345 7.067116 ACAGTTTACGTGATGAAAATACAACG 58.933 34.615 0.00 0.00 0.00 4.10
5384 8491 2.285834 GGATCTGCAAATACAACGAGCG 60.286 50.000 0.00 0.00 0.00 5.03
5389 8496 9.294030 CTATTCAAAAGGATCTGCAAATACAAC 57.706 33.333 0.00 0.00 0.00 3.32
5392 8499 7.859875 GCTCTATTCAAAAGGATCTGCAAATAC 59.140 37.037 0.00 0.00 0.00 1.89
5414 8521 5.237344 GCATTTATTCTACCATCAACGCTCT 59.763 40.000 0.00 0.00 0.00 4.09
5418 8525 6.038161 TCAAGGCATTTATTCTACCATCAACG 59.962 38.462 0.00 0.00 0.00 4.10
5454 8561 5.067413 ACGGTACACAGATACAATCTTCGAT 59.933 40.000 0.00 0.00 37.58 3.59
5518 8625 4.053295 CAAAACTTGCCTCATTGTCCAAG 58.947 43.478 0.00 0.00 40.26 3.61
5534 8641 2.427506 GATCCACTTCCGAGCAAAACT 58.572 47.619 0.00 0.00 0.00 2.66
5544 8651 7.546250 TCTTGATATTAGAGGATCCACTTCC 57.454 40.000 17.39 3.59 33.66 3.46
5545 8652 8.865090 TCTTCTTGATATTAGAGGATCCACTTC 58.135 37.037 17.39 9.10 33.66 3.01
5546 8653 8.789767 TCTTCTTGATATTAGAGGATCCACTT 57.210 34.615 17.39 2.79 33.66 3.16
5547 8654 8.789767 TTCTTCTTGATATTAGAGGATCCACT 57.210 34.615 16.41 16.41 33.66 4.00
5548 8655 9.838339 TTTTCTTCTTGATATTAGAGGATCCAC 57.162 33.333 15.82 8.01 33.66 4.02
5553 8660 9.877178 GTGACTTTTCTTCTTGATATTAGAGGA 57.123 33.333 0.00 0.00 0.00 3.71
5554 8661 9.103861 GGTGACTTTTCTTCTTGATATTAGAGG 57.896 37.037 0.00 0.00 0.00 3.69
5555 8662 9.883142 AGGTGACTTTTCTTCTTGATATTAGAG 57.117 33.333 0.00 0.00 37.44 2.43
5558 8665 9.582431 CGTAGGTGACTTTTCTTCTTGATATTA 57.418 33.333 0.00 0.00 43.67 0.98
5559 8666 7.064728 GCGTAGGTGACTTTTCTTCTTGATATT 59.935 37.037 0.00 0.00 43.67 1.28
5560 8667 6.535508 GCGTAGGTGACTTTTCTTCTTGATAT 59.464 38.462 0.00 0.00 43.67 1.63
5561 8668 5.867716 GCGTAGGTGACTTTTCTTCTTGATA 59.132 40.000 0.00 0.00 43.67 2.15
5562 8669 4.691216 GCGTAGGTGACTTTTCTTCTTGAT 59.309 41.667 0.00 0.00 43.67 2.57
5563 8670 4.056050 GCGTAGGTGACTTTTCTTCTTGA 58.944 43.478 0.00 0.00 43.67 3.02
5564 8671 4.058817 AGCGTAGGTGACTTTTCTTCTTG 58.941 43.478 0.00 0.00 43.67 3.02
5565 8672 4.338379 AGCGTAGGTGACTTTTCTTCTT 57.662 40.909 0.00 0.00 43.67 2.52
5566 8673 4.280174 TGTAGCGTAGGTGACTTTTCTTCT 59.720 41.667 0.00 0.00 43.67 2.85
5567 8674 4.553323 TGTAGCGTAGGTGACTTTTCTTC 58.447 43.478 0.00 0.00 43.67 2.87
5568 8675 4.038883 ACTGTAGCGTAGGTGACTTTTCTT 59.961 41.667 0.00 0.00 43.67 2.52
5569 8676 3.573110 ACTGTAGCGTAGGTGACTTTTCT 59.427 43.478 0.00 0.00 43.67 2.52
5570 8677 3.673809 CACTGTAGCGTAGGTGACTTTTC 59.326 47.826 0.00 0.00 43.67 2.29
5571 8678 3.650139 CACTGTAGCGTAGGTGACTTTT 58.350 45.455 0.00 0.00 43.67 2.27
5572 8679 2.609737 GCACTGTAGCGTAGGTGACTTT 60.610 50.000 7.01 0.00 43.67 2.66
5573 8680 1.067776 GCACTGTAGCGTAGGTGACTT 60.068 52.381 7.01 0.00 43.67 3.01
5574 8681 2.157433 TGCACTGTAGCGTAGGTGACT 61.157 52.381 7.01 0.00 40.22 3.41
5575 8682 0.242825 TGCACTGTAGCGTAGGTGAC 59.757 55.000 7.01 0.00 40.22 3.67
5576 8683 0.963225 TTGCACTGTAGCGTAGGTGA 59.037 50.000 0.00 0.00 40.22 4.02
5577 8684 1.459592 GTTTGCACTGTAGCGTAGGTG 59.540 52.381 0.00 0.00 40.22 4.00
5578 8685 1.343465 AGTTTGCACTGTAGCGTAGGT 59.657 47.619 0.00 0.00 44.89 3.08
5579 8686 2.080286 AGTTTGCACTGTAGCGTAGG 57.920 50.000 0.00 0.00 37.31 3.18
5580 8687 3.608506 CACTAGTTTGCACTGTAGCGTAG 59.391 47.826 0.00 0.00 37.31 3.51
5581 8688 3.005050 ACACTAGTTTGCACTGTAGCGTA 59.995 43.478 0.00 0.00 37.31 4.42
5582 8689 2.223971 ACACTAGTTTGCACTGTAGCGT 60.224 45.455 0.00 0.00 37.31 5.07
5583 8690 2.404215 ACACTAGTTTGCACTGTAGCG 58.596 47.619 0.00 0.00 37.31 4.26
5584 8691 5.917541 TTTACACTAGTTTGCACTGTAGC 57.082 39.130 0.00 0.00 34.06 3.58
5585 8692 7.223971 TCTGTTTTACACTAGTTTGCACTGTAG 59.776 37.037 0.00 0.00 34.06 2.74
5586 8693 7.042950 TCTGTTTTACACTAGTTTGCACTGTA 58.957 34.615 0.00 0.00 34.06 2.74
5587 8694 5.878116 TCTGTTTTACACTAGTTTGCACTGT 59.122 36.000 0.00 0.00 34.06 3.55
5588 8695 6.358118 TCTGTTTTACACTAGTTTGCACTG 57.642 37.500 0.00 0.00 34.06 3.66
5589 8696 6.995511 TTCTGTTTTACACTAGTTTGCACT 57.004 33.333 0.00 0.00 36.99 4.40
5590 8697 7.220108 CCTTTTCTGTTTTACACTAGTTTGCAC 59.780 37.037 0.00 0.00 0.00 4.57
5591 8698 7.121463 TCCTTTTCTGTTTTACACTAGTTTGCA 59.879 33.333 0.00 0.00 0.00 4.08
5592 8699 7.477494 TCCTTTTCTGTTTTACACTAGTTTGC 58.523 34.615 0.00 0.00 0.00 3.68
5593 8700 9.849166 TTTCCTTTTCTGTTTTACACTAGTTTG 57.151 29.630 0.00 0.00 0.00 2.93
5595 8702 9.239551 ACTTTCCTTTTCTGTTTTACACTAGTT 57.760 29.630 0.00 0.00 0.00 2.24
5596 8703 8.803397 ACTTTCCTTTTCTGTTTTACACTAGT 57.197 30.769 0.00 0.00 0.00 2.57
5597 8704 8.889717 TGACTTTCCTTTTCTGTTTTACACTAG 58.110 33.333 0.00 0.00 0.00 2.57
5598 8705 8.671028 GTGACTTTCCTTTTCTGTTTTACACTA 58.329 33.333 0.00 0.00 0.00 2.74
5599 8706 7.535997 GTGACTTTCCTTTTCTGTTTTACACT 58.464 34.615 0.00 0.00 0.00 3.55
5600 8707 6.468000 CGTGACTTTCCTTTTCTGTTTTACAC 59.532 38.462 0.00 0.00 0.00 2.90
5601 8708 6.403855 CCGTGACTTTCCTTTTCTGTTTTACA 60.404 38.462 0.00 0.00 0.00 2.41
5602 8709 5.969435 CCGTGACTTTCCTTTTCTGTTTTAC 59.031 40.000 0.00 0.00 0.00 2.01
5603 8710 5.066764 CCCGTGACTTTCCTTTTCTGTTTTA 59.933 40.000 0.00 0.00 0.00 1.52
5604 8711 4.142249 CCCGTGACTTTCCTTTTCTGTTTT 60.142 41.667 0.00 0.00 0.00 2.43
5605 8712 3.380320 CCCGTGACTTTCCTTTTCTGTTT 59.620 43.478 0.00 0.00 0.00 2.83
5606 8713 2.949644 CCCGTGACTTTCCTTTTCTGTT 59.050 45.455 0.00 0.00 0.00 3.16
5607 8714 2.092592 ACCCGTGACTTTCCTTTTCTGT 60.093 45.455 0.00 0.00 0.00 3.41
5608 8715 2.572290 ACCCGTGACTTTCCTTTTCTG 58.428 47.619 0.00 0.00 0.00 3.02
5609 8716 3.390311 AGTACCCGTGACTTTCCTTTTCT 59.610 43.478 0.00 0.00 0.00 2.52
5610 8717 3.736720 AGTACCCGTGACTTTCCTTTTC 58.263 45.455 0.00 0.00 0.00 2.29
5611 8718 3.851458 AGTACCCGTGACTTTCCTTTT 57.149 42.857 0.00 0.00 0.00 2.27
5612 8719 5.394993 GCTATAGTACCCGTGACTTTCCTTT 60.395 44.000 0.84 0.00 0.00 3.11
5613 8720 4.099113 GCTATAGTACCCGTGACTTTCCTT 59.901 45.833 0.84 0.00 0.00 3.36
5614 8721 3.635836 GCTATAGTACCCGTGACTTTCCT 59.364 47.826 0.84 0.00 0.00 3.36
5615 8722 3.382546 TGCTATAGTACCCGTGACTTTCC 59.617 47.826 0.84 0.00 0.00 3.13
5616 8723 4.644103 TGCTATAGTACCCGTGACTTTC 57.356 45.455 0.84 0.00 0.00 2.62
5617 8724 5.173664 GTTTGCTATAGTACCCGTGACTTT 58.826 41.667 0.84 0.00 0.00 2.66
5618 8725 4.221262 TGTTTGCTATAGTACCCGTGACTT 59.779 41.667 0.84 0.00 0.00 3.01
5619 8726 3.765511 TGTTTGCTATAGTACCCGTGACT 59.234 43.478 0.84 0.00 0.00 3.41
5620 8727 3.861689 GTGTTTGCTATAGTACCCGTGAC 59.138 47.826 0.84 0.00 0.00 3.67
5621 8728 3.765511 AGTGTTTGCTATAGTACCCGTGA 59.234 43.478 0.84 0.00 0.00 4.35
5622 8729 3.863424 CAGTGTTTGCTATAGTACCCGTG 59.137 47.826 0.84 0.00 0.00 4.94
5623 8730 3.512724 ACAGTGTTTGCTATAGTACCCGT 59.487 43.478 0.84 0.00 0.00 5.28
5624 8731 4.119442 ACAGTGTTTGCTATAGTACCCG 57.881 45.455 0.84 0.00 0.00 5.28
5625 8732 9.774413 ATAAATACAGTGTTTGCTATAGTACCC 57.226 33.333 0.00 0.00 0.00 3.69
5634 8741 9.938280 TTACAGTAGATAAATACAGTGTTTGCT 57.062 29.630 0.00 5.62 29.46 3.91
5635 8742 9.968743 GTTACAGTAGATAAATACAGTGTTTGC 57.031 33.333 0.00 0.00 29.46 3.68
5638 8745 9.871238 CCTGTTACAGTAGATAAATACAGTGTT 57.129 33.333 11.68 0.00 32.07 3.32
5639 8746 9.032624 ACCTGTTACAGTAGATAAATACAGTGT 57.967 33.333 11.68 0.00 32.07 3.55
5649 8756 9.465199 TGTGTACAATACCTGTTACAGTAGATA 57.535 33.333 11.68 0.00 39.64 1.98
5650 8757 8.357290 TGTGTACAATACCTGTTACAGTAGAT 57.643 34.615 11.68 0.00 39.64 1.98
5651 8758 7.764141 TGTGTACAATACCTGTTACAGTAGA 57.236 36.000 11.68 0.00 39.64 2.59
5655 8762 8.086522 AGTAACTGTGTACAATACCTGTTACAG 58.913 37.037 27.09 17.45 46.72 2.74
5656 8763 7.868922 CAGTAACTGTGTACAATACCTGTTACA 59.131 37.037 27.09 9.66 40.85 2.41
5657 8764 7.869429 ACAGTAACTGTGTACAATACCTGTTAC 59.131 37.037 22.70 22.70 43.63 2.50
5658 8765 7.954835 ACAGTAACTGTGTACAATACCTGTTA 58.045 34.615 0.00 3.56 43.63 2.41
5659 8766 6.823497 ACAGTAACTGTGTACAATACCTGTT 58.177 36.000 0.00 4.54 43.63 3.16
5660 8767 6.415206 ACAGTAACTGTGTACAATACCTGT 57.585 37.500 0.00 2.89 43.63 4.00
5661 8768 7.152645 AGAACAGTAACTGTGTACAATACCTG 58.847 38.462 0.00 2.25 44.62 4.00
5662 8769 7.299246 AGAACAGTAACTGTGTACAATACCT 57.701 36.000 0.00 0.00 44.62 3.08
5663 8770 8.517878 TCTAGAACAGTAACTGTGTACAATACC 58.482 37.037 0.00 0.00 44.62 2.73
5669 8776 9.570488 CCTTAATCTAGAACAGTAACTGTGTAC 57.430 37.037 0.00 0.00 44.62 2.90
5670 8777 9.305555 ACCTTAATCTAGAACAGTAACTGTGTA 57.694 33.333 0.00 0.00 44.62 2.90
5671 8778 8.191534 ACCTTAATCTAGAACAGTAACTGTGT 57.808 34.615 0.00 0.00 44.62 3.72
5672 8779 9.570488 GTACCTTAATCTAGAACAGTAACTGTG 57.430 37.037 0.00 0.00 44.62 3.66
5679 8786 9.668497 GGATTTTGTACCTTAATCTAGAACAGT 57.332 33.333 0.00 0.00 0.00 3.55
5680 8787 9.110502 GGGATTTTGTACCTTAATCTAGAACAG 57.889 37.037 0.00 0.00 0.00 3.16
5681 8788 8.832735 AGGGATTTTGTACCTTAATCTAGAACA 58.167 33.333 0.00 0.00 38.32 3.18
5693 8800 6.964876 AACCTAGTAAGGGATTTTGTACCT 57.035 37.500 0.00 0.00 46.14 3.08
5706 8813 4.732672 ACGGCTTCCTTAACCTAGTAAG 57.267 45.455 0.00 0.00 0.00 2.34
5707 8814 6.796785 AATACGGCTTCCTTAACCTAGTAA 57.203 37.500 0.00 0.00 0.00 2.24
5708 8815 6.460123 CGAAATACGGCTTCCTTAACCTAGTA 60.460 42.308 0.00 0.00 38.46 1.82
5709 8816 5.668471 GAAATACGGCTTCCTTAACCTAGT 58.332 41.667 0.00 0.00 0.00 2.57
5710 8817 4.743644 CGAAATACGGCTTCCTTAACCTAG 59.256 45.833 0.00 0.00 38.46 3.02
5711 8818 4.685924 CGAAATACGGCTTCCTTAACCTA 58.314 43.478 0.00 0.00 38.46 3.08
5712 8819 3.528532 CGAAATACGGCTTCCTTAACCT 58.471 45.455 0.00 0.00 38.46 3.50
5713 8820 2.031314 GCGAAATACGGCTTCCTTAACC 59.969 50.000 0.00 0.00 42.83 2.85
5714 8821 2.674357 TGCGAAATACGGCTTCCTTAAC 59.326 45.455 0.00 0.00 42.83 2.01
5811 8918 1.595993 GGCGACACCAGTCTGAGCTA 61.596 60.000 0.00 0.00 42.73 3.32
5913 9020 9.668497 GGACCTTCATACTTACAAATCTACTTT 57.332 33.333 0.00 0.00 0.00 2.66
5914 9021 9.047947 AGGACCTTCATACTTACAAATCTACTT 57.952 33.333 0.00 0.00 0.00 2.24
5915 9022 8.611051 AGGACCTTCATACTTACAAATCTACT 57.389 34.615 0.00 0.00 0.00 2.57
5916 9023 9.968870 CTAGGACCTTCATACTTACAAATCTAC 57.031 37.037 0.00 0.00 0.00 2.59
5917 9024 8.639761 GCTAGGACCTTCATACTTACAAATCTA 58.360 37.037 0.00 0.00 0.00 1.98
5919 9026 7.272978 TGCTAGGACCTTCATACTTACAAATC 58.727 38.462 0.00 0.00 0.00 2.17
5920 9027 7.195374 TGCTAGGACCTTCATACTTACAAAT 57.805 36.000 0.00 0.00 0.00 2.32
5921 9028 6.614694 TGCTAGGACCTTCATACTTACAAA 57.385 37.500 0.00 0.00 0.00 2.83
5937 9044 2.832838 TCCTTCTTGTCCATGCTAGGA 58.167 47.619 0.00 0.00 34.64 2.94
5955 9088 3.181451 TGCTCATACTCCAATGTCCATCC 60.181 47.826 0.00 0.00 0.00 3.51
5972 9105 0.321346 TTCATCTCCACGCTTGCTCA 59.679 50.000 0.00 0.00 0.00 4.26
5981 9114 0.247736 ACGTGAGCCTTCATCTCCAC 59.752 55.000 0.00 0.00 35.39 4.02
5988 9121 1.118965 TCCCTTCACGTGAGCCTTCA 61.119 55.000 19.11 1.40 0.00 3.02
5991 9124 0.472471 TTTTCCCTTCACGTGAGCCT 59.528 50.000 19.11 0.00 0.00 4.58
5995 9128 2.610374 CGTTCTTTTTCCCTTCACGTGA 59.390 45.455 15.76 15.76 0.00 4.35
6000 9133 3.570912 ACTCCGTTCTTTTTCCCTTCA 57.429 42.857 0.00 0.00 0.00 3.02
6003 9136 3.220110 GGAAACTCCGTTCTTTTTCCCT 58.780 45.455 1.19 0.00 40.75 4.20
6041 9371 9.571816 TTATATGTCATCATGATGGCTACAAAA 57.428 29.630 33.71 21.84 43.47 2.44
6046 9376 7.180766 TGTCCTTATATGTCATCATGATGGCTA 59.819 37.037 33.71 24.40 43.47 3.93
6052 9389 7.389232 GTCCATGTCCTTATATGTCATCATGA 58.611 38.462 0.00 0.00 35.07 3.07
6061 9398 8.353684 GGTATATCTCGTCCATGTCCTTATATG 58.646 40.741 0.00 0.00 0.00 1.78
6074 9411 6.777213 AAGGTCATATGGTATATCTCGTCC 57.223 41.667 2.13 0.00 0.00 4.79
6109 9446 6.345882 GCGCAACACTTATACTAAGCTATGAC 60.346 42.308 0.30 0.00 0.00 3.06
6120 9458 1.734163 AGGTGGCGCAACACTTATAC 58.266 50.000 18.47 0.00 41.09 1.47
6125 9463 1.616159 AAATAAGGTGGCGCAACACT 58.384 45.000 18.47 8.71 41.09 3.55
6168 9556 8.880878 AAAAACAGCCTATGAAAACGTATTTT 57.119 26.923 0.00 0.00 40.83 1.82
6174 9562 6.899114 ACTCTAAAAACAGCCTATGAAAACG 58.101 36.000 0.00 0.00 0.00 3.60
6175 9563 8.017946 CAGACTCTAAAAACAGCCTATGAAAAC 58.982 37.037 0.00 0.00 0.00 2.43
6176 9564 7.719633 ACAGACTCTAAAAACAGCCTATGAAAA 59.280 33.333 0.00 0.00 0.00 2.29
6177 9565 7.224297 ACAGACTCTAAAAACAGCCTATGAAA 58.776 34.615 0.00 0.00 0.00 2.69
6200 9588 6.127281 TGCTGAGTCGTTTTCCCTATAATACA 60.127 38.462 0.00 0.00 0.00 2.29
6206 9594 2.093447 CCTGCTGAGTCGTTTTCCCTAT 60.093 50.000 0.00 0.00 0.00 2.57
6212 9600 2.038387 AACACCTGCTGAGTCGTTTT 57.962 45.000 0.00 0.00 0.00 2.43
6214 9602 2.038387 AAAACACCTGCTGAGTCGTT 57.962 45.000 0.00 0.00 0.00 3.85
6244 9632 3.117888 GGAGATTTCATCCACCCTTAGCA 60.118 47.826 0.00 0.00 36.79 3.49
6257 9645 3.269034 AGGGAAAAGGGAGGAGATTTCA 58.731 45.455 0.00 0.00 34.31 2.69
6264 9652 6.183361 GCTGTATTTATAGGGAAAAGGGAGGA 60.183 42.308 0.00 0.00 0.00 3.71
6318 9707 5.918576 GGCGCACTTTAATCTAAACAAAACT 59.081 36.000 10.83 0.00 0.00 2.66
6336 9725 2.127383 GTTGCAACTACGGCGCAC 60.127 61.111 22.36 0.00 34.87 5.34
6338 9727 2.474712 GAGTTGCAACTACGGCGC 59.525 61.111 31.20 14.50 39.88 6.53
6339 9728 2.388232 GGGAGTTGCAACTACGGCG 61.388 63.158 30.73 4.80 40.93 6.46
6340 9729 2.388232 CGGGAGTTGCAACTACGGC 61.388 63.158 32.28 21.79 40.93 5.68
6341 9730 0.244450 TACGGGAGTTGCAACTACGG 59.756 55.000 37.44 36.48 43.33 4.02
6342 9731 1.068055 AGTACGGGAGTTGCAACTACG 60.068 52.381 35.31 35.31 43.33 3.51
6343 9732 2.603953 GAGTACGGGAGTTGCAACTAC 58.396 52.381 30.43 30.43 43.33 2.73
6344 9733 1.200716 CGAGTACGGGAGTTGCAACTA 59.799 52.381 31.20 13.46 43.33 2.24
6345 9734 0.038526 CGAGTACGGGAGTTGCAACT 60.039 55.000 31.57 31.57 43.33 3.16
6346 9735 0.319297 ACGAGTACGGGAGTTGCAAC 60.319 55.000 22.17 22.17 43.33 4.17
6347 9736 0.390124 AACGAGTACGGGAGTTGCAA 59.610 50.000 0.00 0.00 43.33 4.08
6348 9737 0.390124 AAACGAGTACGGGAGTTGCA 59.610 50.000 0.00 0.00 43.33 4.08
6349 9738 0.788391 CAAACGAGTACGGGAGTTGC 59.212 55.000 0.00 0.00 43.33 4.17
6350 9739 1.790623 CACAAACGAGTACGGGAGTTG 59.209 52.381 0.00 0.00 43.33 3.16
6351 9740 1.410153 ACACAAACGAGTACGGGAGTT 59.590 47.619 0.00 0.00 43.33 3.01
6353 9742 1.668047 GGACACAAACGAGTACGGGAG 60.668 57.143 0.00 0.00 44.46 4.30
6354 9743 0.314935 GGACACAAACGAGTACGGGA 59.685 55.000 0.00 0.00 44.46 5.14
6355 9744 0.032403 TGGACACAAACGAGTACGGG 59.968 55.000 0.00 0.00 44.46 5.28
6356 9745 1.523934 GTTGGACACAAACGAGTACGG 59.476 52.381 0.00 0.00 44.46 4.02
6357 9746 2.195096 TGTTGGACACAAACGAGTACG 58.805 47.619 0.00 0.00 38.54 3.67
6372 9764 2.568623 AGTCTTGGCCTAGTTGTTGG 57.431 50.000 14.12 0.00 0.00 3.77
6374 9766 3.117663 TGGAAAGTCTTGGCCTAGTTGTT 60.118 43.478 14.12 6.43 0.00 2.83
6377 9769 2.979678 TCTGGAAAGTCTTGGCCTAGTT 59.020 45.455 14.12 1.09 0.00 2.24
6380 9772 2.039879 GGTTCTGGAAAGTCTTGGCCTA 59.960 50.000 3.32 0.00 0.00 3.93
6382 9774 1.248486 GGTTCTGGAAAGTCTTGGCC 58.752 55.000 0.00 0.00 0.00 5.36
6383 9775 1.248486 GGGTTCTGGAAAGTCTTGGC 58.752 55.000 0.00 0.00 0.00 4.52
6391 9783 3.117322 TGATGAAAGTGGGGTTCTGGAAA 60.117 43.478 0.00 0.00 0.00 3.13
6393 9785 2.061848 TGATGAAAGTGGGGTTCTGGA 58.938 47.619 0.00 0.00 0.00 3.86
6394 9786 2.584835 TGATGAAAGTGGGGTTCTGG 57.415 50.000 0.00 0.00 0.00 3.86
6395 9787 6.588719 TTTATTGATGAAAGTGGGGTTCTG 57.411 37.500 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.