Multiple sequence alignment - TraesCS2D01G253400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G253400 chr2D 100.000 5711 0 0 1 5711 305863081 305868791 0.000000e+00 10547.0
1 TraesCS2D01G253400 chr2D 80.672 476 61 14 2644 3115 87787709 87787261 1.970000e-89 340.0
2 TraesCS2D01G253400 chr2D 84.574 188 29 0 651 838 543815424 543815237 2.720000e-43 187.0
3 TraesCS2D01G253400 chr2D 90.476 63 6 0 3192 3254 305866242 305866304 3.670000e-12 84.2
4 TraesCS2D01G253400 chr2D 90.476 63 6 0 3162 3224 305866272 305866334 3.670000e-12 84.2
5 TraesCS2D01G253400 chr2A 94.379 1779 69 8 3192 4951 384678240 384680006 0.000000e+00 2702.0
6 TraesCS2D01G253400 chr2A 93.588 967 41 11 1293 2246 384675847 384676805 0.000000e+00 1423.0
7 TraesCS2D01G253400 chr2A 90.203 837 33 13 2414 3224 384677488 384678301 0.000000e+00 1046.0
8 TraesCS2D01G253400 chr2A 97.500 440 8 3 4937 5374 384680023 384680461 0.000000e+00 749.0
9 TraesCS2D01G253400 chr2A 95.474 464 12 1 848 1302 384675211 384675674 0.000000e+00 732.0
10 TraesCS2D01G253400 chr2A 86.607 336 21 11 5373 5705 384686129 384686443 3.270000e-92 350.0
11 TraesCS2D01G253400 chr2A 86.310 336 22 11 5373 5705 384681044 384681358 1.520000e-90 344.0
12 TraesCS2D01G253400 chr2A 86.350 337 21 11 5373 5705 384683414 384683729 1.520000e-90 344.0
13 TraesCS2D01G253400 chr2A 84.354 294 43 2 558 850 778843801 778843510 9.370000e-73 285.0
14 TraesCS2D01G253400 chr2A 92.810 153 10 1 2414 2565 611937149 611936997 2.680000e-53 220.0
15 TraesCS2D01G253400 chr2A 94.406 143 6 2 2276 2417 384677321 384677462 9.630000e-53 219.0
16 TraesCS2D01G253400 chr2A 79.817 218 38 6 2635 2850 651978457 651978244 2.760000e-33 154.0
17 TraesCS2D01G253400 chr2A 82.143 140 13 2 5578 5706 771517285 771517147 6.050000e-20 110.0
18 TraesCS2D01G253400 chr2B 95.586 1586 47 9 848 2417 373980897 373982475 0.000000e+00 2519.0
19 TraesCS2D01G253400 chr2B 95.292 701 30 3 2525 3224 373982517 373983215 0.000000e+00 1109.0
20 TraesCS2D01G253400 chr2B 96.078 663 22 2 3192 3853 373983153 373983812 0.000000e+00 1077.0
21 TraesCS2D01G253400 chr2B 81.673 562 97 6 1 558 423777486 423778045 4.030000e-126 462.0
22 TraesCS2D01G253400 chr2B 85.488 379 22 10 5335 5711 373984054 373984401 1.170000e-96 364.0
23 TraesCS2D01G253400 chr2B 80.471 297 53 3 561 853 646127778 646127483 7.450000e-54 222.0
24 TraesCS2D01G253400 chr2B 81.070 243 42 4 2626 2867 23970172 23969933 2.100000e-44 191.0
25 TraesCS2D01G253400 chr2B 90.816 98 6 3 5578 5673 602996300 602996396 1.670000e-25 128.0
26 TraesCS2D01G253400 chr4D 95.552 562 25 0 1 562 16352623 16353184 0.000000e+00 900.0
27 TraesCS2D01G253400 chr4D 95.374 562 26 0 1 562 16270471 16271032 0.000000e+00 894.0
28 TraesCS2D01G253400 chr4D 95.374 562 26 0 1 562 16312346 16312907 0.000000e+00 894.0
29 TraesCS2D01G253400 chr4D 94.558 147 7 1 2414 2559 482703590 482703444 5.760000e-55 226.0
30 TraesCS2D01G253400 chr4D 87.027 185 21 3 2414 2596 478512222 478512405 7.500000e-49 206.0
31 TraesCS2D01G253400 chrUn 95.374 562 26 0 1 562 375777751 375778312 0.000000e+00 894.0
32 TraesCS2D01G253400 chrUn 97.222 216 4 2 869 1082 95809010 95808795 1.170000e-96 364.0
33 TraesCS2D01G253400 chr5B 86.981 530 51 4 29 558 184805846 184806357 1.070000e-161 580.0
34 TraesCS2D01G253400 chr3B 83.124 557 90 4 3 558 375168630 375168077 6.600000e-139 505.0
35 TraesCS2D01G253400 chr3B 83.459 266 38 6 2869 3131 55360459 55360197 5.720000e-60 243.0
36 TraesCS2D01G253400 chr3B 84.211 133 16 3 5578 5705 106421326 106421194 2.160000e-24 124.0
37 TraesCS2D01G253400 chr7B 82.765 557 93 3 3 559 361789620 361790173 1.430000e-135 494.0
38 TraesCS2D01G253400 chr7B 78.125 288 60 3 564 849 591596817 591597103 4.550000e-41 180.0
39 TraesCS2D01G253400 chr1A 94.649 299 13 3 558 853 560254347 560254049 1.450000e-125 460.0
40 TraesCS2D01G253400 chr1A 86.589 343 42 4 2773 3113 495715987 495716327 5.400000e-100 375.0
41 TraesCS2D01G253400 chr1A 77.824 239 47 6 2626 2861 507983038 507982803 5.960000e-30 143.0
42 TraesCS2D01G253400 chr1A 90.123 81 7 1 5578 5657 155857706 155857786 2.810000e-18 104.0
43 TraesCS2D01G253400 chr4B 81.283 561 97 8 1 556 525238997 525238440 1.130000e-121 448.0
44 TraesCS2D01G253400 chr1B 92.977 299 20 1 558 856 478537614 478537911 8.790000e-118 435.0
45 TraesCS2D01G253400 chr1B 83.158 285 48 0 558 842 683215584 683215300 1.580000e-65 261.0
46 TraesCS2D01G253400 chr1B 91.358 162 11 2 2414 2572 402146903 402147064 9.630000e-53 219.0
47 TraesCS2D01G253400 chr1B 91.579 95 7 1 5577 5671 491242177 491242084 4.640000e-26 130.0
48 TraesCS2D01G253400 chr1B 90.625 96 8 1 5578 5672 646931258 646931163 6.010000e-25 126.0
49 TraesCS2D01G253400 chr1D 87.725 334 39 2 2780 3113 399042863 399043194 6.940000e-104 388.0
50 TraesCS2D01G253400 chr1D 87.500 336 37 5 2780 3113 398987334 398987666 3.230000e-102 383.0
51 TraesCS2D01G253400 chr1D 78.838 241 41 9 2626 2861 411363541 411363306 2.760000e-33 154.0
52 TraesCS2D01G253400 chr1D 91.579 95 7 1 5578 5671 366243681 366243775 4.640000e-26 130.0
53 TraesCS2D01G253400 chr1D 90.526 95 9 0 5578 5672 468265415 468265321 6.010000e-25 126.0
54 TraesCS2D01G253400 chr6B 80.744 457 53 24 2662 3111 552398221 552398649 1.980000e-84 324.0
55 TraesCS2D01G253400 chr6B 92.857 154 9 2 2414 2565 503547060 503546907 7.450000e-54 222.0
56 TraesCS2D01G253400 chr5A 89.453 256 27 0 4457 4712 608965999 608965744 1.980000e-84 324.0
57 TraesCS2D01G253400 chr3D 84.412 340 42 11 2645 2976 478641470 478641806 1.980000e-84 324.0
58 TraesCS2D01G253400 chr3D 84.118 340 40 13 2645 2976 478644639 478644972 3.320000e-82 316.0
59 TraesCS2D01G253400 chr3D 81.788 302 49 6 558 857 451156695 451156992 1.230000e-61 248.0
60 TraesCS2D01G253400 chr3D 94.558 147 7 1 2414 2559 422517759 422517613 5.760000e-55 226.0
61 TraesCS2D01G253400 chr3D 89.873 79 8 0 5575 5653 170537796 170537874 1.010000e-17 102.0
62 TraesCS2D01G253400 chr5D 89.062 256 28 0 4457 4712 488223212 488222957 9.230000e-83 318.0
63 TraesCS2D01G253400 chr5D 79.597 397 53 10 2719 3115 104604626 104604994 5.680000e-65 259.0
64 TraesCS2D01G253400 chr5D 82.971 276 39 7 2840 3114 5005680 5005948 5.720000e-60 243.0
65 TraesCS2D01G253400 chr3A 79.733 449 80 10 2670 3112 27801225 27800782 1.190000e-81 315.0
66 TraesCS2D01G253400 chr4A 95.238 147 6 1 2414 2559 681712949 681713095 1.240000e-56 231.0
67 TraesCS2D01G253400 chr4A 78.746 287 59 2 564 849 181703675 181703390 2.100000e-44 191.0
68 TraesCS2D01G253400 chr7A 95.745 141 6 0 2414 2554 83784869 83785009 1.600000e-55 228.0
69 TraesCS2D01G253400 chr7A 90.000 170 15 2 2414 2581 15838071 15837902 9.630000e-53 219.0
70 TraesCS2D01G253400 chr7A 88.750 80 9 0 5575 5654 375877668 375877589 1.310000e-16 99.0
71 TraesCS2D01G253400 chr6A 87.629 97 12 0 5578 5674 243958431 243958335 4.680000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G253400 chr2D 305863081 305868791 5710 False 3571.800000 10547 93.650667 1 5711 3 chr2D.!!$F1 5710
1 TraesCS2D01G253400 chr2A 384675211 384686443 11232 False 878.777778 2702 91.646333 848 5705 9 chr2A.!!$F1 4857
2 TraesCS2D01G253400 chr2B 373980897 373984401 3504 False 1267.250000 2519 93.111000 848 5711 4 chr2B.!!$F3 4863
3 TraesCS2D01G253400 chr2B 423777486 423778045 559 False 462.000000 462 81.673000 1 558 1 chr2B.!!$F1 557
4 TraesCS2D01G253400 chr4D 16352623 16353184 561 False 900.000000 900 95.552000 1 562 1 chr4D.!!$F3 561
5 TraesCS2D01G253400 chr4D 16270471 16271032 561 False 894.000000 894 95.374000 1 562 1 chr4D.!!$F1 561
6 TraesCS2D01G253400 chr4D 16312346 16312907 561 False 894.000000 894 95.374000 1 562 1 chr4D.!!$F2 561
7 TraesCS2D01G253400 chrUn 375777751 375778312 561 False 894.000000 894 95.374000 1 562 1 chrUn.!!$F1 561
8 TraesCS2D01G253400 chr5B 184805846 184806357 511 False 580.000000 580 86.981000 29 558 1 chr5B.!!$F1 529
9 TraesCS2D01G253400 chr3B 375168077 375168630 553 True 505.000000 505 83.124000 3 558 1 chr3B.!!$R3 555
10 TraesCS2D01G253400 chr7B 361789620 361790173 553 False 494.000000 494 82.765000 3 559 1 chr7B.!!$F1 556
11 TraesCS2D01G253400 chr4B 525238440 525238997 557 True 448.000000 448 81.283000 1 556 1 chr4B.!!$R1 555
12 TraesCS2D01G253400 chr3D 478641470 478644972 3502 False 320.000000 324 84.265000 2645 2976 2 chr3D.!!$F3 331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
663 666 0.107643 TGGACGTCAAAGTGATGGCA 59.892 50.0 18.91 0.0 43.20 4.92 F
2088 2299 0.178873 AGGAGCCACCCCTCAACTTA 60.179 55.0 0.00 0.0 40.05 2.24 F
2496 3222 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.0 0.00 0.0 39.22 3.86 F
2509 3235 0.252057 TCCAGGACTCGAACCCATGA 60.252 55.0 0.00 0.0 0.00 3.07 F
2510 3236 0.833287 CCAGGACTCGAACCCATGAT 59.167 55.0 0.00 0.0 0.00 2.45 F
4180 5556 0.957888 GTGGTCTGGCTTGGCTCTTC 60.958 60.0 0.00 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2513 3239 0.038892 GCTGTTGCCTTGTGACCATG 60.039 55.000 0.00 0.00 0.00 3.66 R
3173 4090 2.039216 TGCAACCCAAGACTCGGAAATA 59.961 45.455 0.00 0.00 0.00 1.40 R
4440 5816 0.909133 TGTCATACCTGCAGAGCCCA 60.909 55.000 17.39 0.83 0.00 5.36 R
4491 5867 1.271817 TGCACATACATCTTGCCACCA 60.272 47.619 0.00 0.00 35.26 4.17 R
4517 5893 4.133820 CTCATCACTGTACTCCTCGATCT 58.866 47.826 0.00 0.00 0.00 2.75 R
5171 6706 1.514678 TTGCATGTCCAGGAACGCAC 61.515 55.000 7.98 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 160 4.565564 GCATCTTTGCTTCATGGAAATCAC 59.434 41.667 0.00 0.00 45.77 3.06
430 431 7.050970 ACATCGATTTATGAGTAGTTAGGCA 57.949 36.000 0.00 0.00 0.00 4.75
579 582 8.856490 AAAATGTTATCTTCAATACGGATTGC 57.144 30.769 15.93 0.26 42.01 3.56
580 583 6.560253 ATGTTATCTTCAATACGGATTGCC 57.440 37.500 15.93 0.00 42.01 4.52
581 584 5.680619 TGTTATCTTCAATACGGATTGCCT 58.319 37.500 15.93 2.68 42.01 4.75
582 585 5.758296 TGTTATCTTCAATACGGATTGCCTC 59.242 40.000 15.93 2.75 42.01 4.70
583 586 4.696479 ATCTTCAATACGGATTGCCTCT 57.304 40.909 15.93 0.00 42.01 3.69
584 587 4.060038 TCTTCAATACGGATTGCCTCTC 57.940 45.455 15.93 0.00 42.01 3.20
585 588 2.509052 TCAATACGGATTGCCTCTCG 57.491 50.000 15.93 0.00 42.01 4.04
586 589 1.068588 TCAATACGGATTGCCTCTCGG 59.931 52.381 15.93 0.00 42.01 4.63
587 590 1.120530 AATACGGATTGCCTCTCGGT 58.879 50.000 0.00 0.00 0.00 4.69
588 591 0.389391 ATACGGATTGCCTCTCGGTG 59.611 55.000 0.00 0.00 0.00 4.94
589 592 0.681887 TACGGATTGCCTCTCGGTGA 60.682 55.000 0.00 0.00 0.00 4.02
590 593 1.330655 ACGGATTGCCTCTCGGTGAT 61.331 55.000 0.00 0.00 0.00 3.06
591 594 0.877649 CGGATTGCCTCTCGGTGATG 60.878 60.000 0.00 0.00 0.00 3.07
592 595 1.162800 GGATTGCCTCTCGGTGATGC 61.163 60.000 1.15 1.15 36.94 3.91
593 596 0.462581 GATTGCCTCTCGGTGATGCA 60.463 55.000 6.02 6.02 42.93 3.96
594 597 0.463295 ATTGCCTCTCGGTGATGCAG 60.463 55.000 9.36 0.00 44.70 4.41
595 598 2.894387 GCCTCTCGGTGATGCAGC 60.894 66.667 0.00 0.00 36.52 5.25
602 605 3.266964 GGTGATGCAGCGCTTGAA 58.733 55.556 16.00 0.00 0.00 2.69
603 606 1.580942 GGTGATGCAGCGCTTGAAA 59.419 52.632 16.00 0.00 0.00 2.69
604 607 0.171903 GGTGATGCAGCGCTTGAAAT 59.828 50.000 16.00 0.00 0.00 2.17
605 608 1.542544 GTGATGCAGCGCTTGAAATC 58.457 50.000 7.50 9.27 0.00 2.17
606 609 1.131883 GTGATGCAGCGCTTGAAATCT 59.868 47.619 7.50 0.00 0.00 2.40
607 610 1.814394 TGATGCAGCGCTTGAAATCTT 59.186 42.857 7.50 0.00 0.00 2.40
608 611 2.159476 TGATGCAGCGCTTGAAATCTTC 60.159 45.455 7.50 1.75 0.00 2.87
609 612 1.527034 TGCAGCGCTTGAAATCTTCT 58.473 45.000 7.50 0.00 0.00 2.85
610 613 1.881973 TGCAGCGCTTGAAATCTTCTT 59.118 42.857 7.50 0.00 0.00 2.52
611 614 2.095567 TGCAGCGCTTGAAATCTTCTTC 60.096 45.455 7.50 0.00 0.00 2.87
612 615 2.161211 GCAGCGCTTGAAATCTTCTTCT 59.839 45.455 7.50 0.00 0.00 2.85
613 616 3.372206 GCAGCGCTTGAAATCTTCTTCTA 59.628 43.478 7.50 0.00 0.00 2.10
614 617 4.493872 GCAGCGCTTGAAATCTTCTTCTAG 60.494 45.833 7.50 0.00 33.11 2.43
615 618 4.629200 CAGCGCTTGAAATCTTCTTCTAGT 59.371 41.667 7.50 0.00 32.72 2.57
616 619 4.629200 AGCGCTTGAAATCTTCTTCTAGTG 59.371 41.667 2.64 4.64 39.86 2.74
617 620 4.627467 GCGCTTGAAATCTTCTTCTAGTGA 59.373 41.667 0.00 0.00 39.50 3.41
618 621 5.445275 GCGCTTGAAATCTTCTTCTAGTGAC 60.445 44.000 0.00 1.91 39.50 3.67
619 622 5.062809 CGCTTGAAATCTTCTTCTAGTGACC 59.937 44.000 3.32 0.00 39.50 4.02
620 623 5.062809 GCTTGAAATCTTCTTCTAGTGACCG 59.937 44.000 0.00 0.00 32.72 4.79
621 624 4.495422 TGAAATCTTCTTCTAGTGACCGC 58.505 43.478 0.00 0.00 0.00 5.68
622 625 4.220821 TGAAATCTTCTTCTAGTGACCGCT 59.779 41.667 0.00 0.00 0.00 5.52
623 626 4.379339 AATCTTCTTCTAGTGACCGCTC 57.621 45.455 0.00 0.00 0.00 5.03
624 627 1.738350 TCTTCTTCTAGTGACCGCTCG 59.262 52.381 0.00 0.00 0.00 5.03
625 628 0.809385 TTCTTCTAGTGACCGCTCGG 59.191 55.000 6.79 6.79 42.03 4.63
635 638 2.183555 CCGCTCGGTGGTAGGTTC 59.816 66.667 0.00 0.00 0.00 3.62
636 639 2.348888 CCGCTCGGTGGTAGGTTCT 61.349 63.158 0.00 0.00 0.00 3.01
637 640 1.033746 CCGCTCGGTGGTAGGTTCTA 61.034 60.000 0.00 0.00 0.00 2.10
638 641 1.030457 CGCTCGGTGGTAGGTTCTAT 58.970 55.000 0.00 0.00 0.00 1.98
639 642 1.407979 CGCTCGGTGGTAGGTTCTATT 59.592 52.381 0.00 0.00 0.00 1.73
640 643 2.543238 CGCTCGGTGGTAGGTTCTATTC 60.543 54.545 0.00 0.00 0.00 1.75
641 644 2.694109 GCTCGGTGGTAGGTTCTATTCT 59.306 50.000 0.00 0.00 0.00 2.40
642 645 3.132467 GCTCGGTGGTAGGTTCTATTCTT 59.868 47.826 0.00 0.00 0.00 2.52
643 646 4.340381 GCTCGGTGGTAGGTTCTATTCTTA 59.660 45.833 0.00 0.00 0.00 2.10
644 647 5.010820 GCTCGGTGGTAGGTTCTATTCTTAT 59.989 44.000 0.00 0.00 0.00 1.73
645 648 6.401047 TCGGTGGTAGGTTCTATTCTTATG 57.599 41.667 0.00 0.00 0.00 1.90
646 649 5.303589 TCGGTGGTAGGTTCTATTCTTATGG 59.696 44.000 0.00 0.00 0.00 2.74
647 650 5.303589 CGGTGGTAGGTTCTATTCTTATGGA 59.696 44.000 0.00 0.00 0.00 3.41
648 651 6.522946 GGTGGTAGGTTCTATTCTTATGGAC 58.477 44.000 0.00 0.00 0.00 4.02
649 652 6.214399 GTGGTAGGTTCTATTCTTATGGACG 58.786 44.000 0.00 0.00 0.00 4.79
650 653 5.895534 TGGTAGGTTCTATTCTTATGGACGT 59.104 40.000 0.00 0.00 0.00 4.34
651 654 6.040166 TGGTAGGTTCTATTCTTATGGACGTC 59.960 42.308 7.13 7.13 0.00 4.34
652 655 6.040166 GGTAGGTTCTATTCTTATGGACGTCA 59.960 42.308 18.91 3.91 0.00 4.35
653 656 6.540438 AGGTTCTATTCTTATGGACGTCAA 57.460 37.500 18.91 6.46 0.00 3.18
654 657 6.942976 AGGTTCTATTCTTATGGACGTCAAA 58.057 36.000 18.91 5.15 0.00 2.69
655 658 7.042335 AGGTTCTATTCTTATGGACGTCAAAG 58.958 38.462 18.91 16.44 0.00 2.77
656 659 6.817140 GGTTCTATTCTTATGGACGTCAAAGT 59.183 38.462 18.91 5.58 0.00 2.66
657 660 7.201530 GGTTCTATTCTTATGGACGTCAAAGTG 60.202 40.741 18.91 4.39 0.00 3.16
658 661 7.165460 TCTATTCTTATGGACGTCAAAGTGA 57.835 36.000 18.91 6.79 0.00 3.41
659 662 7.782049 TCTATTCTTATGGACGTCAAAGTGAT 58.218 34.615 18.91 15.64 0.00 3.06
660 663 6.668541 ATTCTTATGGACGTCAAAGTGATG 57.331 37.500 18.91 0.00 39.24 3.07
661 664 4.503910 TCTTATGGACGTCAAAGTGATGG 58.496 43.478 18.91 0.00 37.70 3.51
662 665 1.453155 ATGGACGTCAAAGTGATGGC 58.547 50.000 18.91 0.00 40.69 4.40
663 666 0.107643 TGGACGTCAAAGTGATGGCA 59.892 50.000 18.91 0.00 43.20 4.92
664 667 1.234821 GGACGTCAAAGTGATGGCAA 58.765 50.000 18.91 0.00 43.20 4.52
665 668 1.606668 GGACGTCAAAGTGATGGCAAA 59.393 47.619 18.91 0.00 43.20 3.68
666 669 2.228822 GGACGTCAAAGTGATGGCAAAT 59.771 45.455 18.91 0.00 43.20 2.32
667 670 3.236816 GACGTCAAAGTGATGGCAAATG 58.763 45.455 11.55 0.00 41.08 2.32
668 671 2.030007 ACGTCAAAGTGATGGCAAATGG 60.030 45.455 0.00 0.00 37.70 3.16
669 672 2.030007 CGTCAAAGTGATGGCAAATGGT 60.030 45.455 0.00 0.00 29.96 3.55
670 673 3.578688 GTCAAAGTGATGGCAAATGGTC 58.421 45.455 0.00 0.00 0.00 4.02
671 674 3.256631 GTCAAAGTGATGGCAAATGGTCT 59.743 43.478 0.00 0.00 0.00 3.85
672 675 3.896888 TCAAAGTGATGGCAAATGGTCTT 59.103 39.130 0.00 0.00 0.00 3.01
673 676 4.344679 TCAAAGTGATGGCAAATGGTCTTT 59.655 37.500 0.00 0.00 0.00 2.52
674 677 4.525912 AAGTGATGGCAAATGGTCTTTC 57.474 40.909 0.00 0.00 0.00 2.62
675 678 3.771216 AGTGATGGCAAATGGTCTTTCT 58.229 40.909 0.00 0.00 0.00 2.52
676 679 4.154942 AGTGATGGCAAATGGTCTTTCTT 58.845 39.130 0.00 0.00 0.00 2.52
677 680 4.219288 AGTGATGGCAAATGGTCTTTCTTC 59.781 41.667 0.00 0.00 0.00 2.87
678 681 4.219288 GTGATGGCAAATGGTCTTTCTTCT 59.781 41.667 0.00 0.00 0.00 2.85
679 682 4.219070 TGATGGCAAATGGTCTTTCTTCTG 59.781 41.667 0.00 0.00 0.00 3.02
680 683 2.297033 TGGCAAATGGTCTTTCTTCTGC 59.703 45.455 0.00 0.00 0.00 4.26
681 684 2.297033 GGCAAATGGTCTTTCTTCTGCA 59.703 45.455 0.00 0.00 0.00 4.41
682 685 3.243839 GGCAAATGGTCTTTCTTCTGCAA 60.244 43.478 0.00 0.00 0.00 4.08
683 686 3.737774 GCAAATGGTCTTTCTTCTGCAAC 59.262 43.478 0.00 0.00 0.00 4.17
684 687 4.500375 GCAAATGGTCTTTCTTCTGCAACT 60.500 41.667 0.00 0.00 0.00 3.16
685 688 5.594926 CAAATGGTCTTTCTTCTGCAACTT 58.405 37.500 0.00 0.00 0.00 2.66
686 689 5.859205 AATGGTCTTTCTTCTGCAACTTT 57.141 34.783 0.00 0.00 0.00 2.66
687 690 4.900635 TGGTCTTTCTTCTGCAACTTTC 57.099 40.909 0.00 0.00 0.00 2.62
688 691 3.632145 TGGTCTTTCTTCTGCAACTTTCC 59.368 43.478 0.00 0.00 0.00 3.13
689 692 3.632145 GGTCTTTCTTCTGCAACTTTCCA 59.368 43.478 0.00 0.00 0.00 3.53
690 693 4.261363 GGTCTTTCTTCTGCAACTTTCCAG 60.261 45.833 0.00 0.00 0.00 3.86
691 694 3.316308 TCTTTCTTCTGCAACTTTCCAGC 59.684 43.478 0.00 0.00 0.00 4.85
692 695 2.346766 TCTTCTGCAACTTTCCAGCA 57.653 45.000 0.00 0.00 36.72 4.41
693 696 2.867624 TCTTCTGCAACTTTCCAGCAT 58.132 42.857 0.00 0.00 37.68 3.79
694 697 2.555325 TCTTCTGCAACTTTCCAGCATG 59.445 45.455 0.00 0.00 37.68 4.06
695 698 1.985473 TCTGCAACTTTCCAGCATGT 58.015 45.000 0.00 0.00 37.68 3.21
696 699 2.309613 TCTGCAACTTTCCAGCATGTT 58.690 42.857 0.00 0.00 37.68 2.71
697 700 2.294233 TCTGCAACTTTCCAGCATGTTC 59.706 45.455 0.00 0.00 37.68 3.18
698 701 1.001487 TGCAACTTTCCAGCATGTTCG 60.001 47.619 0.00 0.00 32.55 3.95
699 702 1.001378 GCAACTTTCCAGCATGTTCGT 60.001 47.619 0.00 0.00 0.00 3.85
700 703 2.918131 GCAACTTTCCAGCATGTTCGTC 60.918 50.000 0.00 0.00 0.00 4.20
701 704 1.148310 ACTTTCCAGCATGTTCGTCG 58.852 50.000 0.00 0.00 0.00 5.12
702 705 0.443869 CTTTCCAGCATGTTCGTCGG 59.556 55.000 0.00 0.00 0.00 4.79
703 706 1.573829 TTTCCAGCATGTTCGTCGGC 61.574 55.000 0.00 0.00 0.00 5.54
704 707 2.723586 TTCCAGCATGTTCGTCGGCA 62.724 55.000 0.00 0.00 0.00 5.69
705 708 2.743752 CCAGCATGTTCGTCGGCAG 61.744 63.158 0.00 0.00 0.00 4.85
706 709 2.029288 CAGCATGTTCGTCGGCAGT 61.029 57.895 0.00 0.00 0.00 4.40
707 710 0.735978 CAGCATGTTCGTCGGCAGTA 60.736 55.000 0.00 0.00 0.00 2.74
708 711 0.736325 AGCATGTTCGTCGGCAGTAC 60.736 55.000 0.00 0.00 0.00 2.73
709 712 1.011968 GCATGTTCGTCGGCAGTACA 61.012 55.000 0.00 0.00 0.00 2.90
710 713 1.424403 CATGTTCGTCGGCAGTACAA 58.576 50.000 0.00 0.00 0.00 2.41
711 714 1.999735 CATGTTCGTCGGCAGTACAAT 59.000 47.619 0.00 0.00 0.00 2.71
712 715 1.424403 TGTTCGTCGGCAGTACAATG 58.576 50.000 0.00 0.00 0.00 2.82
713 716 1.269883 TGTTCGTCGGCAGTACAATGT 60.270 47.619 0.00 0.00 0.00 2.71
714 717 1.796459 GTTCGTCGGCAGTACAATGTT 59.204 47.619 0.00 0.00 0.00 2.71
715 718 2.157834 TCGTCGGCAGTACAATGTTT 57.842 45.000 0.00 0.00 0.00 2.83
716 719 2.485903 TCGTCGGCAGTACAATGTTTT 58.514 42.857 0.00 0.00 0.00 2.43
717 720 3.651206 TCGTCGGCAGTACAATGTTTTA 58.349 40.909 0.00 0.00 0.00 1.52
718 721 3.676172 TCGTCGGCAGTACAATGTTTTAG 59.324 43.478 0.00 0.00 0.00 1.85
719 722 3.723835 CGTCGGCAGTACAATGTTTTAGC 60.724 47.826 0.00 0.00 0.00 3.09
720 723 3.435671 GTCGGCAGTACAATGTTTTAGCT 59.564 43.478 0.00 0.00 0.00 3.32
721 724 4.069304 TCGGCAGTACAATGTTTTAGCTT 58.931 39.130 0.00 0.00 0.00 3.74
722 725 5.121142 GTCGGCAGTACAATGTTTTAGCTTA 59.879 40.000 0.00 0.00 0.00 3.09
723 726 5.878116 TCGGCAGTACAATGTTTTAGCTTAT 59.122 36.000 0.00 0.00 0.00 1.73
724 727 5.965334 CGGCAGTACAATGTTTTAGCTTATG 59.035 40.000 0.00 0.00 0.00 1.90
725 728 6.403200 CGGCAGTACAATGTTTTAGCTTATGT 60.403 38.462 0.00 0.00 0.00 2.29
726 729 6.967199 GGCAGTACAATGTTTTAGCTTATGTC 59.033 38.462 0.00 0.00 0.00 3.06
727 730 7.148239 GGCAGTACAATGTTTTAGCTTATGTCT 60.148 37.037 0.00 0.00 0.00 3.41
728 731 8.237267 GCAGTACAATGTTTTAGCTTATGTCTT 58.763 33.333 0.00 0.00 0.00 3.01
731 734 9.704098 GTACAATGTTTTAGCTTATGTCTTAGC 57.296 33.333 0.00 0.00 37.66 3.09
733 736 9.667107 ACAATGTTTTAGCTTATGTCTTAGCTA 57.333 29.630 0.00 0.00 45.46 3.32
742 745 8.934023 AGCTTATGTCTTAGCTAGATCTAGTT 57.066 34.615 26.73 23.91 45.46 2.24
743 746 9.362151 AGCTTATGTCTTAGCTAGATCTAGTTT 57.638 33.333 26.73 18.76 45.46 2.66
744 747 9.405587 GCTTATGTCTTAGCTAGATCTAGTTTG 57.594 37.037 26.73 17.93 34.79 2.93
747 750 7.033530 TGTCTTAGCTAGATCTAGTTTGAGC 57.966 40.000 26.73 16.48 34.79 4.26
748 751 6.831353 TGTCTTAGCTAGATCTAGTTTGAGCT 59.169 38.462 26.73 21.86 42.64 4.09
749 752 7.012894 TGTCTTAGCTAGATCTAGTTTGAGCTC 59.987 40.741 26.73 6.82 40.58 4.09
750 753 7.228706 GTCTTAGCTAGATCTAGTTTGAGCTCT 59.771 40.741 26.73 16.33 40.58 4.09
751 754 8.433599 TCTTAGCTAGATCTAGTTTGAGCTCTA 58.566 37.037 26.73 15.48 40.58 2.43
752 755 6.877611 AGCTAGATCTAGTTTGAGCTCTAC 57.122 41.667 26.73 12.84 35.38 2.59
753 756 6.601332 AGCTAGATCTAGTTTGAGCTCTACT 58.399 40.000 26.73 20.68 35.38 2.57
754 757 7.741785 AGCTAGATCTAGTTTGAGCTCTACTA 58.258 38.462 26.73 19.07 35.38 1.82
755 758 7.878127 AGCTAGATCTAGTTTGAGCTCTACTAG 59.122 40.741 30.57 30.57 41.61 2.57
756 759 7.660208 GCTAGATCTAGTTTGAGCTCTACTAGT 59.340 40.741 32.42 25.65 41.22 2.57
757 760 9.204570 CTAGATCTAGTTTGAGCTCTACTAGTC 57.795 40.741 32.42 28.83 41.22 2.59
758 761 6.996282 AGATCTAGTTTGAGCTCTACTAGTCC 59.004 42.308 32.42 27.38 41.22 3.85
759 762 6.063496 TCTAGTTTGAGCTCTACTAGTCCA 57.937 41.667 32.42 21.92 41.22 4.02
760 763 6.664714 TCTAGTTTGAGCTCTACTAGTCCAT 58.335 40.000 32.42 13.87 41.22 3.41
761 764 5.590530 AGTTTGAGCTCTACTAGTCCATG 57.409 43.478 16.19 0.00 0.00 3.66
762 765 5.020132 AGTTTGAGCTCTACTAGTCCATGT 58.980 41.667 16.19 0.00 0.00 3.21
763 766 6.188407 AGTTTGAGCTCTACTAGTCCATGTA 58.812 40.000 16.19 0.00 0.00 2.29
764 767 6.836527 AGTTTGAGCTCTACTAGTCCATGTAT 59.163 38.462 16.19 0.00 0.00 2.29
765 768 7.343316 AGTTTGAGCTCTACTAGTCCATGTATT 59.657 37.037 16.19 0.00 0.00 1.89
766 769 7.661536 TTGAGCTCTACTAGTCCATGTATTT 57.338 36.000 16.19 0.00 0.00 1.40
767 770 7.661536 TGAGCTCTACTAGTCCATGTATTTT 57.338 36.000 16.19 0.00 0.00 1.82
768 771 8.079211 TGAGCTCTACTAGTCCATGTATTTTT 57.921 34.615 16.19 0.00 0.00 1.94
769 772 8.198109 TGAGCTCTACTAGTCCATGTATTTTTC 58.802 37.037 16.19 0.00 0.00 2.29
770 773 8.079211 AGCTCTACTAGTCCATGTATTTTTCA 57.921 34.615 0.00 0.00 0.00 2.69
771 774 8.709308 AGCTCTACTAGTCCATGTATTTTTCAT 58.291 33.333 0.00 0.00 0.00 2.57
772 775 9.331282 GCTCTACTAGTCCATGTATTTTTCATT 57.669 33.333 0.00 0.00 0.00 2.57
774 777 9.529325 TCTACTAGTCCATGTATTTTTCATTCG 57.471 33.333 0.00 0.00 0.00 3.34
775 778 7.553881 ACTAGTCCATGTATTTTTCATTCGG 57.446 36.000 0.00 0.00 0.00 4.30
776 779 5.248870 AGTCCATGTATTTTTCATTCGGC 57.751 39.130 0.00 0.00 0.00 5.54
777 780 4.949856 AGTCCATGTATTTTTCATTCGGCT 59.050 37.500 0.00 0.00 0.00 5.52
778 781 5.066505 AGTCCATGTATTTTTCATTCGGCTC 59.933 40.000 0.00 0.00 0.00 4.70
779 782 4.338118 TCCATGTATTTTTCATTCGGCTCC 59.662 41.667 0.00 0.00 0.00 4.70
780 783 4.282068 CATGTATTTTTCATTCGGCTCCG 58.718 43.478 1.14 1.14 41.35 4.63
781 784 2.680841 TGTATTTTTCATTCGGCTCCGG 59.319 45.455 8.59 0.00 40.25 5.14
782 785 2.122783 ATTTTTCATTCGGCTCCGGA 57.877 45.000 2.93 2.93 40.25 5.14
783 786 2.122783 TTTTTCATTCGGCTCCGGAT 57.877 45.000 3.57 1.85 38.32 4.18
784 787 2.122783 TTTTCATTCGGCTCCGGATT 57.877 45.000 3.57 0.00 35.13 3.01
785 788 1.378531 TTTCATTCGGCTCCGGATTG 58.621 50.000 3.57 0.00 35.13 2.67
786 789 1.095228 TTCATTCGGCTCCGGATTGC 61.095 55.000 3.57 5.72 35.13 3.56
787 790 1.819208 CATTCGGCTCCGGATTGCA 60.819 57.895 16.67 0.00 35.13 4.08
788 791 1.149174 ATTCGGCTCCGGATTGCAT 59.851 52.632 16.67 0.20 33.20 3.96
789 792 0.886490 ATTCGGCTCCGGATTGCATC 60.886 55.000 16.67 0.62 33.20 3.91
790 793 2.940890 TTCGGCTCCGGATTGCATCC 62.941 60.000 16.67 5.67 46.22 3.51
797 800 4.464262 GGATTGCATCCGGGAGAC 57.536 61.111 0.00 0.00 40.13 3.36
798 801 1.832912 GGATTGCATCCGGGAGACT 59.167 57.895 0.00 0.00 40.13 3.24
799 802 0.250081 GGATTGCATCCGGGAGACTC 60.250 60.000 0.00 0.00 40.13 3.36
800 803 0.755686 GATTGCATCCGGGAGACTCT 59.244 55.000 0.00 0.00 0.00 3.24
801 804 1.139853 GATTGCATCCGGGAGACTCTT 59.860 52.381 0.00 0.00 0.00 2.85
802 805 0.984230 TTGCATCCGGGAGACTCTTT 59.016 50.000 0.00 0.00 0.00 2.52
803 806 0.250234 TGCATCCGGGAGACTCTTTG 59.750 55.000 0.00 0.00 0.00 2.77
804 807 0.250513 GCATCCGGGAGACTCTTTGT 59.749 55.000 0.00 0.00 0.00 2.83
805 808 1.480954 GCATCCGGGAGACTCTTTGTA 59.519 52.381 0.00 0.00 0.00 2.41
806 809 2.093658 GCATCCGGGAGACTCTTTGTAA 60.094 50.000 0.00 0.00 0.00 2.41
807 810 3.618997 GCATCCGGGAGACTCTTTGTAAA 60.619 47.826 0.00 0.00 0.00 2.01
808 811 4.770795 CATCCGGGAGACTCTTTGTAAAT 58.229 43.478 0.00 0.00 0.00 1.40
809 812 4.903045 TCCGGGAGACTCTTTGTAAATT 57.097 40.909 0.00 0.00 0.00 1.82
810 813 5.237236 TCCGGGAGACTCTTTGTAAATTT 57.763 39.130 0.00 0.00 0.00 1.82
811 814 5.001232 TCCGGGAGACTCTTTGTAAATTTG 58.999 41.667 0.00 0.00 0.00 2.32
812 815 4.760204 CCGGGAGACTCTTTGTAAATTTGT 59.240 41.667 0.00 0.00 0.00 2.83
813 816 5.240844 CCGGGAGACTCTTTGTAAATTTGTT 59.759 40.000 0.00 0.00 0.00 2.83
814 817 6.142817 CGGGAGACTCTTTGTAAATTTGTTG 58.857 40.000 0.00 0.00 0.00 3.33
815 818 6.447162 GGGAGACTCTTTGTAAATTTGTTGG 58.553 40.000 0.00 0.00 0.00 3.77
816 819 6.040504 GGGAGACTCTTTGTAAATTTGTTGGT 59.959 38.462 0.00 0.00 0.00 3.67
817 820 7.417456 GGGAGACTCTTTGTAAATTTGTTGGTT 60.417 37.037 0.00 0.00 0.00 3.67
818 821 7.435192 GGAGACTCTTTGTAAATTTGTTGGTTG 59.565 37.037 0.00 0.00 0.00 3.77
819 822 8.062065 AGACTCTTTGTAAATTTGTTGGTTGA 57.938 30.769 0.00 0.00 0.00 3.18
820 823 8.695456 AGACTCTTTGTAAATTTGTTGGTTGAT 58.305 29.630 0.00 0.00 0.00 2.57
821 824 8.871686 ACTCTTTGTAAATTTGTTGGTTGATC 57.128 30.769 0.00 0.00 0.00 2.92
822 825 8.474025 ACTCTTTGTAAATTTGTTGGTTGATCA 58.526 29.630 0.00 0.00 0.00 2.92
823 826 9.311916 CTCTTTGTAAATTTGTTGGTTGATCAA 57.688 29.630 3.38 3.38 0.00 2.57
824 827 9.829507 TCTTTGTAAATTTGTTGGTTGATCAAT 57.170 25.926 12.12 0.00 0.00 2.57
831 834 8.831715 AATTTGTTGGTTGATCAATAAAGACC 57.168 30.769 12.12 8.23 39.69 3.85
832 835 5.621197 TGTTGGTTGATCAATAAAGACCG 57.379 39.130 12.12 0.00 0.00 4.79
833 836 5.309638 TGTTGGTTGATCAATAAAGACCGA 58.690 37.500 12.12 4.61 0.00 4.69
834 837 5.180492 TGTTGGTTGATCAATAAAGACCGAC 59.820 40.000 19.37 19.37 40.42 4.79
835 838 3.930229 TGGTTGATCAATAAAGACCGACG 59.070 43.478 12.12 0.00 0.00 5.12
836 839 3.930848 GGTTGATCAATAAAGACCGACGT 59.069 43.478 12.12 0.00 0.00 4.34
837 840 4.390909 GGTTGATCAATAAAGACCGACGTT 59.609 41.667 12.12 0.00 0.00 3.99
838 841 5.445540 GGTTGATCAATAAAGACCGACGTTC 60.446 44.000 12.12 0.00 0.00 3.95
839 842 3.855379 TGATCAATAAAGACCGACGTTCG 59.145 43.478 0.00 0.00 40.07 3.95
840 843 1.987770 TCAATAAAGACCGACGTTCGC 59.012 47.619 0.00 0.00 38.82 4.70
841 844 1.990563 CAATAAAGACCGACGTTCGCT 59.009 47.619 0.00 0.00 38.82 4.93
842 845 3.119884 TCAATAAAGACCGACGTTCGCTA 60.120 43.478 0.00 0.00 38.82 4.26
843 846 2.987413 TAAAGACCGACGTTCGCTAA 57.013 45.000 0.00 0.00 38.82 3.09
844 847 2.138596 AAAGACCGACGTTCGCTAAA 57.861 45.000 0.00 0.00 38.82 1.85
845 848 2.138596 AAGACCGACGTTCGCTAAAA 57.861 45.000 0.00 0.00 38.82 1.52
846 849 2.138596 AGACCGACGTTCGCTAAAAA 57.861 45.000 0.00 0.00 38.82 1.94
995 1000 1.695893 CCGCAAGCACGTGATCGATT 61.696 55.000 22.23 0.00 40.62 3.34
1264 1278 0.245266 TTCGATCTGCGTTGGCACTA 59.755 50.000 0.00 0.00 46.21 2.74
1344 1542 2.507058 TGGAAACCAGCAGATAGAGCAT 59.493 45.455 0.00 0.00 0.00 3.79
1365 1563 3.728845 TCCTGCTAGTTGAACTGTTGAC 58.271 45.455 8.33 0.00 0.00 3.18
1370 1568 3.368236 GCTAGTTGAACTGTTGACGGATC 59.632 47.826 8.33 0.00 0.00 3.36
1448 1646 6.711277 TCATATCTTTGCCTGACTTAGTTGT 58.289 36.000 0.00 0.00 0.00 3.32
1493 1691 0.767375 ATATCCCGCTCAGCATTGGT 59.233 50.000 0.00 0.00 0.00 3.67
1515 1713 2.858745 AGTTACCGCCAAACAGATGTT 58.141 42.857 0.00 0.00 40.50 2.71
1595 1806 5.048713 GGCAGGATATGACTTATTTTTCCCG 60.049 44.000 0.00 0.00 32.26 5.14
1606 1817 7.881232 TGACTTATTTTTCCCGAATGAAGTACT 59.119 33.333 0.00 0.00 0.00 2.73
1923 2134 5.836024 TTGTTCAGGGTAATAACTCCTGT 57.164 39.130 8.24 0.00 41.33 4.00
2003 2214 4.385825 ACGAAGAAGGTCTTTTGCATGTA 58.614 39.130 0.00 0.00 36.73 2.29
2088 2299 0.178873 AGGAGCCACCCCTCAACTTA 60.179 55.000 0.00 0.00 40.05 2.24
2112 2323 0.399075 AACCAAAGGGACCCTACACG 59.601 55.000 15.29 4.33 38.05 4.49
2251 2462 4.077982 TCATTCCTCCAGTAAGTATCCCCT 60.078 45.833 0.00 0.00 0.00 4.79
2252 2463 3.614568 TCCTCCAGTAAGTATCCCCTC 57.385 52.381 0.00 0.00 0.00 4.30
2443 3169 0.396811 AGAAGGGTCCGACCACTTTG 59.603 55.000 19.43 0.00 41.02 2.77
2469 3195 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
2496 3222 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
2497 3223 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
2498 3224 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
2499 3225 0.980423 AGAGGCTGTTTCCAGGACTC 59.020 55.000 0.00 0.00 39.22 3.36
2500 3226 0.390472 GAGGCTGTTTCCAGGACTCG 60.390 60.000 0.00 0.00 39.22 4.18
2501 3227 0.832135 AGGCTGTTTCCAGGACTCGA 60.832 55.000 0.00 0.00 39.22 4.04
2503 3229 1.149148 GCTGTTTCCAGGACTCGAAC 58.851 55.000 0.00 0.00 39.22 3.95
2504 3230 1.797025 CTGTTTCCAGGACTCGAACC 58.203 55.000 0.00 0.64 34.90 3.62
2505 3231 0.395312 TGTTTCCAGGACTCGAACCC 59.605 55.000 0.00 0.12 0.00 4.11
2506 3232 0.395312 GTTTCCAGGACTCGAACCCA 59.605 55.000 5.66 0.00 0.00 4.51
2507 3233 1.003233 GTTTCCAGGACTCGAACCCAT 59.997 52.381 5.66 0.00 0.00 4.00
2508 3234 0.613260 TTCCAGGACTCGAACCCATG 59.387 55.000 5.66 0.00 0.00 3.66
2509 3235 0.252057 TCCAGGACTCGAACCCATGA 60.252 55.000 0.00 0.00 0.00 3.07
2510 3236 0.833287 CCAGGACTCGAACCCATGAT 59.167 55.000 0.00 0.00 0.00 2.45
2511 3237 1.202580 CCAGGACTCGAACCCATGATC 60.203 57.143 0.00 0.00 0.00 2.92
2512 3238 1.759445 CAGGACTCGAACCCATGATCT 59.241 52.381 0.00 0.00 0.00 2.75
2513 3239 2.035632 AGGACTCGAACCCATGATCTC 58.964 52.381 0.00 0.00 0.00 2.75
2514 3240 1.757118 GGACTCGAACCCATGATCTCA 59.243 52.381 0.00 0.00 0.00 3.27
2515 3241 2.366916 GGACTCGAACCCATGATCTCAT 59.633 50.000 0.00 0.00 36.96 2.90
2677 3426 4.019950 TGGAGCTCTCACATTCAATTGAGA 60.020 41.667 14.64 10.18 44.80 3.27
2835 3592 4.234574 GGATTTGGTTCACGATTTTGACC 58.765 43.478 0.00 0.00 0.00 4.02
2899 3656 9.864034 CATCGACATCCACAATACTAAATAAAC 57.136 33.333 0.00 0.00 0.00 2.01
2949 3706 6.987992 TGATTCTAATGGTACCGGTTTGATAC 59.012 38.462 15.04 3.58 0.00 2.24
3018 3776 4.380841 GGTTTGACTTTTCGGAAAACCT 57.619 40.909 11.68 0.61 44.10 3.50
3118 4034 5.593502 CGTCCAACCCTTCTAGTATAAGAGT 59.406 44.000 0.00 0.00 0.00 3.24
3214 4131 9.076596 GGTTGCAAAATCTAGTGTTTATGATTC 57.923 33.333 0.00 0.00 0.00 2.52
3215 4132 9.846248 GTTGCAAAATCTAGTGTTTATGATTCT 57.154 29.630 0.00 0.00 0.00 2.40
3217 4134 9.844790 TGCAAAATCTAGTGTTTATGATTCTTG 57.155 29.630 0.00 0.00 0.00 3.02
3218 4135 9.294030 GCAAAATCTAGTGTTTATGATTCTTGG 57.706 33.333 0.00 0.00 0.00 3.61
3219 4136 9.793252 CAAAATCTAGTGTTTATGATTCTTGGG 57.207 33.333 0.00 0.00 0.00 4.12
3220 4137 9.533831 AAAATCTAGTGTTTATGATTCTTGGGT 57.466 29.630 0.00 0.00 0.00 4.51
3221 4138 9.533831 AAATCTAGTGTTTATGATTCTTGGGTT 57.466 29.630 0.00 0.00 0.00 4.11
3222 4139 7.921786 TCTAGTGTTTATGATTCTTGGGTTG 57.078 36.000 0.00 0.00 0.00 3.77
3223 4140 5.391312 AGTGTTTATGATTCTTGGGTTGC 57.609 39.130 0.00 0.00 0.00 4.17
3224 4141 4.832266 AGTGTTTATGATTCTTGGGTTGCA 59.168 37.500 0.00 0.00 0.00 4.08
3225 4142 5.304101 AGTGTTTATGATTCTTGGGTTGCAA 59.696 36.000 0.00 0.00 0.00 4.08
3226 4143 5.988561 GTGTTTATGATTCTTGGGTTGCAAA 59.011 36.000 0.00 0.00 0.00 3.68
3227 4144 6.481644 GTGTTTATGATTCTTGGGTTGCAAAA 59.518 34.615 0.00 0.00 0.00 2.44
3228 4145 7.173047 GTGTTTATGATTCTTGGGTTGCAAAAT 59.827 33.333 0.00 0.00 0.00 1.82
3229 4146 7.387397 TGTTTATGATTCTTGGGTTGCAAAATC 59.613 33.333 0.00 6.52 0.00 2.17
3230 4147 5.750352 ATGATTCTTGGGTTGCAAAATCT 57.250 34.783 16.29 4.23 0.00 2.40
3231 4148 6.855763 ATGATTCTTGGGTTGCAAAATCTA 57.144 33.333 16.29 7.11 0.00 1.98
3232 4149 6.271488 TGATTCTTGGGTTGCAAAATCTAG 57.729 37.500 16.29 9.28 0.00 2.43
3233 4150 5.774690 TGATTCTTGGGTTGCAAAATCTAGT 59.225 36.000 16.29 0.00 0.00 2.57
3234 4151 5.452078 TTCTTGGGTTGCAAAATCTAGTG 57.548 39.130 0.00 0.00 0.00 2.74
3235 4152 4.469657 TCTTGGGTTGCAAAATCTAGTGT 58.530 39.130 0.00 0.00 0.00 3.55
3236 4153 4.892934 TCTTGGGTTGCAAAATCTAGTGTT 59.107 37.500 0.00 0.00 0.00 3.32
3237 4154 5.362430 TCTTGGGTTGCAAAATCTAGTGTTT 59.638 36.000 0.00 0.00 0.00 2.83
3238 4155 6.547880 TCTTGGGTTGCAAAATCTAGTGTTTA 59.452 34.615 0.00 0.00 0.00 2.01
3239 4156 6.909550 TGGGTTGCAAAATCTAGTGTTTAT 57.090 33.333 0.00 0.00 0.00 1.40
3240 4157 6.686630 TGGGTTGCAAAATCTAGTGTTTATG 58.313 36.000 0.00 0.00 0.00 1.90
3241 4158 6.491745 TGGGTTGCAAAATCTAGTGTTTATGA 59.508 34.615 0.00 0.00 0.00 2.15
3242 4159 7.178274 TGGGTTGCAAAATCTAGTGTTTATGAT 59.822 33.333 0.00 0.00 0.00 2.45
3243 4160 8.034804 GGGTTGCAAAATCTAGTGTTTATGATT 58.965 33.333 0.00 0.00 0.00 2.57
3486 4792 3.523374 AAAGAAACCTGGGGCCCCG 62.523 63.158 36.00 28.11 39.42 5.73
3858 5183 4.995487 ACTCTGAAAAAGATACACCCGTTC 59.005 41.667 0.00 0.00 33.29 3.95
3865 5190 9.451002 TGAAAAAGATACACCCGTTCAATATTA 57.549 29.630 0.00 0.00 0.00 0.98
3895 5220 6.737254 TCTCGTCTTCTGTTTTCAGTTTTT 57.263 33.333 0.00 0.00 46.98 1.94
3899 5224 7.681903 TCGTCTTCTGTTTTCAGTTTTTACTC 58.318 34.615 0.00 0.00 46.98 2.59
3943 5268 4.220693 TGCATAGGCTGTGAACATAGTT 57.779 40.909 16.02 0.00 41.91 2.24
3964 5324 7.734924 AGTTTATGTGTCATGGCATATACTG 57.265 36.000 15.42 0.00 37.95 2.74
4144 5520 4.566759 CGTCGTATGTTCATGGAAGATGTT 59.433 41.667 0.00 0.00 28.66 2.71
4145 5521 5.063438 CGTCGTATGTTCATGGAAGATGTTT 59.937 40.000 0.00 0.00 28.66 2.83
4180 5556 0.957888 GTGGTCTGGCTTGGCTCTTC 60.958 60.000 0.00 0.00 0.00 2.87
4265 5641 7.337942 AGCAGTATCCAGAAAATTTCAGGTTAG 59.662 37.037 15.30 4.37 37.57 2.34
4322 5698 9.979578 GTTTGCCCAATGATATTATTGTGAATA 57.020 29.630 16.48 0.00 36.54 1.75
4336 5712 8.958119 TTATTGTGAATACTATGGTCCAGTTC 57.042 34.615 0.00 0.00 0.00 3.01
4372 5748 7.148355 ACTTGTGTAGTTAAGAGCTCTACTC 57.852 40.000 20.06 13.71 38.82 2.59
4410 5786 3.654414 CTTGACTTGAGTAAAGCCGACT 58.346 45.455 0.00 0.00 39.76 4.18
4424 5800 3.070018 AGCCGACTGATTCTTGTTTGAG 58.930 45.455 0.00 0.00 0.00 3.02
4491 5867 2.222027 CGGGAGCAGAAAAACAAGAGT 58.778 47.619 0.00 0.00 0.00 3.24
4517 5893 2.749076 GCAAGATGTATGTGCAGGACAA 59.251 45.455 0.00 0.00 38.36 3.18
4539 5915 4.133820 AGATCGAGGAGTACAGTGATGAG 58.866 47.826 0.00 0.00 0.00 2.90
4601 5977 1.114627 GGTTTGAAGGGGATGATGCC 58.885 55.000 0.00 0.00 0.00 4.40
4654 6030 0.877743 GCAAAGAGGTGAGAGTTGGC 59.122 55.000 0.00 0.00 0.00 4.52
4727 6103 4.473477 ACTAGGTTACAATGGCTGAGAC 57.527 45.455 0.00 0.00 0.00 3.36
4844 6344 4.142364 GTGCGTCGCATGATTAATAAAACG 59.858 41.667 24.65 0.00 41.91 3.60
4906 6406 5.195940 ACTCCTGTCCATTTTACATGATGG 58.804 41.667 0.00 1.74 43.36 3.51
4910 6410 5.187576 CCTGTCCATTTTACATGATGGGTTT 59.812 40.000 10.41 0.00 42.47 3.27
4953 6487 7.555965 TGCTGTTTAGTACATGTCACTATGAT 58.444 34.615 0.00 0.00 35.85 2.45
5006 6540 6.931840 GTGTAGCATCTCCCTTTATCTTTAGG 59.068 42.308 0.00 0.00 0.00 2.69
5141 6676 8.630037 AGTTAGGTTCAGGTTTTTGTATTCTTG 58.370 33.333 0.00 0.00 0.00 3.02
5171 6706 7.359595 TCTCATCATTGTTTTACTTTTCCACG 58.640 34.615 0.00 0.00 0.00 4.94
5189 6724 1.965930 GTGCGTTCCTGGACATGCA 60.966 57.895 16.57 16.57 0.00 3.96
5350 6886 4.380531 ACATGTTCAGGTGTTCTGTAGTG 58.619 43.478 0.00 0.00 43.76 2.74
5368 6904 8.575589 TCTGTAGTGAATTTAGGTAACGTGTAA 58.424 33.333 0.00 0.00 46.39 2.41
5396 9886 5.363580 TCAGCTTCCCTTTTTGTTCATTTCT 59.636 36.000 0.00 0.00 0.00 2.52
5478 9968 5.576447 TCAAAAGACTCTTTTGGTTCCAC 57.424 39.130 30.83 0.00 39.25 4.02
5480 9970 2.256117 AGACTCTTTTGGTTCCACCG 57.744 50.000 0.00 0.00 42.58 4.94
5494 9984 3.985019 TCCACCGCCTTAATTTCTACA 57.015 42.857 0.00 0.00 0.00 2.74
5543 10036 4.920640 TTTGCGGGTAAAACTCATTTCA 57.079 36.364 0.00 0.00 32.27 2.69
5544 10037 5.461032 TTTGCGGGTAAAACTCATTTCAT 57.539 34.783 0.00 0.00 32.27 2.57
5545 10038 6.576662 TTTGCGGGTAAAACTCATTTCATA 57.423 33.333 0.00 0.00 32.27 2.15
5698 12956 9.061610 CAAAACATCTTATATTTGTGAACGGAC 57.938 33.333 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.226859 TGTAGCATGCCGTCGTAGC 60.227 57.895 15.66 0.00 0.00 3.58
150 151 4.685447 CGGTGACCGTGATTTCCA 57.315 55.556 17.28 0.00 42.73 3.53
380 381 1.171308 CCAACACCAGCTTCATCCTG 58.829 55.000 0.00 0.00 0.00 3.86
381 382 0.038744 CCCAACACCAGCTTCATCCT 59.961 55.000 0.00 0.00 0.00 3.24
430 431 7.062749 TCACTCAACACCTAAACAATACTCT 57.937 36.000 0.00 0.00 0.00 3.24
562 565 4.636249 GAGAGGCAATCCGTATTGAAGAT 58.364 43.478 4.72 0.00 44.50 2.40
563 566 3.490933 CGAGAGGCAATCCGTATTGAAGA 60.491 47.826 4.72 0.00 44.50 2.87
564 567 2.797156 CGAGAGGCAATCCGTATTGAAG 59.203 50.000 4.72 0.00 44.50 3.02
565 568 2.821546 CGAGAGGCAATCCGTATTGAA 58.178 47.619 4.72 0.00 44.50 2.69
566 569 2.509052 CGAGAGGCAATCCGTATTGA 57.491 50.000 4.72 0.00 44.50 2.57
580 583 3.260483 GCGCTGCATCACCGAGAG 61.260 66.667 0.00 0.00 0.00 3.20
581 584 3.300934 AAGCGCTGCATCACCGAGA 62.301 57.895 12.58 0.00 0.00 4.04
582 585 2.816958 AAGCGCTGCATCACCGAG 60.817 61.111 12.58 0.00 0.00 4.63
583 586 3.120385 CAAGCGCTGCATCACCGA 61.120 61.111 12.58 0.00 0.00 4.69
584 587 2.186350 TTTCAAGCGCTGCATCACCG 62.186 55.000 12.58 0.00 0.00 4.94
585 588 0.171903 ATTTCAAGCGCTGCATCACC 59.828 50.000 12.58 0.00 0.00 4.02
586 589 1.131883 AGATTTCAAGCGCTGCATCAC 59.868 47.619 12.58 1.85 0.00 3.06
587 590 1.456296 AGATTTCAAGCGCTGCATCA 58.544 45.000 12.58 0.00 0.00 3.07
588 591 2.097142 AGAAGATTTCAAGCGCTGCATC 59.903 45.455 12.58 10.42 0.00 3.91
589 592 2.089980 AGAAGATTTCAAGCGCTGCAT 58.910 42.857 12.58 0.00 0.00 3.96
590 593 1.527034 AGAAGATTTCAAGCGCTGCA 58.473 45.000 12.58 0.00 0.00 4.41
591 594 2.161211 AGAAGAAGATTTCAAGCGCTGC 59.839 45.455 12.58 0.00 0.00 5.25
592 595 4.629200 ACTAGAAGAAGATTTCAAGCGCTG 59.371 41.667 12.58 5.47 0.00 5.18
593 596 4.629200 CACTAGAAGAAGATTTCAAGCGCT 59.371 41.667 2.64 2.64 0.00 5.92
594 597 4.627467 TCACTAGAAGAAGATTTCAAGCGC 59.373 41.667 0.00 0.00 0.00 5.92
595 598 5.062809 GGTCACTAGAAGAAGATTTCAAGCG 59.937 44.000 0.00 0.00 0.00 4.68
596 599 5.062809 CGGTCACTAGAAGAAGATTTCAAGC 59.937 44.000 0.00 0.00 0.00 4.01
597 600 5.062809 GCGGTCACTAGAAGAAGATTTCAAG 59.937 44.000 0.00 0.00 0.00 3.02
598 601 4.929808 GCGGTCACTAGAAGAAGATTTCAA 59.070 41.667 0.00 0.00 0.00 2.69
599 602 4.220821 AGCGGTCACTAGAAGAAGATTTCA 59.779 41.667 0.00 0.00 0.00 2.69
600 603 4.749976 AGCGGTCACTAGAAGAAGATTTC 58.250 43.478 0.00 0.00 0.00 2.17
601 604 4.675671 CGAGCGGTCACTAGAAGAAGATTT 60.676 45.833 15.89 0.00 0.00 2.17
602 605 3.181495 CGAGCGGTCACTAGAAGAAGATT 60.181 47.826 15.89 0.00 0.00 2.40
603 606 2.356382 CGAGCGGTCACTAGAAGAAGAT 59.644 50.000 15.89 0.00 0.00 2.40
604 607 1.738350 CGAGCGGTCACTAGAAGAAGA 59.262 52.381 15.89 0.00 0.00 2.87
605 608 1.202200 CCGAGCGGTCACTAGAAGAAG 60.202 57.143 15.89 0.00 0.00 2.85
606 609 0.809385 CCGAGCGGTCACTAGAAGAA 59.191 55.000 15.89 0.00 0.00 2.52
607 610 2.478989 CCGAGCGGTCACTAGAAGA 58.521 57.895 15.89 0.00 0.00 2.87
618 621 1.033746 TAGAACCTACCACCGAGCGG 61.034 60.000 7.48 7.48 42.03 5.52
619 622 1.030457 ATAGAACCTACCACCGAGCG 58.970 55.000 0.00 0.00 0.00 5.03
620 623 2.694109 AGAATAGAACCTACCACCGAGC 59.306 50.000 0.00 0.00 0.00 5.03
621 624 6.448006 CATAAGAATAGAACCTACCACCGAG 58.552 44.000 0.00 0.00 0.00 4.63
622 625 5.303589 CCATAAGAATAGAACCTACCACCGA 59.696 44.000 0.00 0.00 0.00 4.69
623 626 5.303589 TCCATAAGAATAGAACCTACCACCG 59.696 44.000 0.00 0.00 0.00 4.94
624 627 6.522946 GTCCATAAGAATAGAACCTACCACC 58.477 44.000 0.00 0.00 0.00 4.61
625 628 6.183360 ACGTCCATAAGAATAGAACCTACCAC 60.183 42.308 0.00 0.00 0.00 4.16
626 629 5.895534 ACGTCCATAAGAATAGAACCTACCA 59.104 40.000 0.00 0.00 0.00 3.25
627 630 6.040166 TGACGTCCATAAGAATAGAACCTACC 59.960 42.308 14.12 0.00 0.00 3.18
628 631 7.035840 TGACGTCCATAAGAATAGAACCTAC 57.964 40.000 14.12 0.00 0.00 3.18
629 632 7.649533 TTGACGTCCATAAGAATAGAACCTA 57.350 36.000 14.12 0.00 0.00 3.08
630 633 6.540438 TTGACGTCCATAAGAATAGAACCT 57.460 37.500 14.12 0.00 0.00 3.50
631 634 6.817140 ACTTTGACGTCCATAAGAATAGAACC 59.183 38.462 21.62 0.00 0.00 3.62
632 635 7.544566 TCACTTTGACGTCCATAAGAATAGAAC 59.455 37.037 21.62 0.00 0.00 3.01
633 636 7.608153 TCACTTTGACGTCCATAAGAATAGAA 58.392 34.615 21.62 1.76 0.00 2.10
634 637 7.165460 TCACTTTGACGTCCATAAGAATAGA 57.835 36.000 21.62 13.48 0.00 1.98
635 638 7.042456 CCATCACTTTGACGTCCATAAGAATAG 60.042 40.741 21.62 7.23 0.00 1.73
636 639 6.761242 CCATCACTTTGACGTCCATAAGAATA 59.239 38.462 21.62 11.07 0.00 1.75
637 640 5.586243 CCATCACTTTGACGTCCATAAGAAT 59.414 40.000 21.62 14.17 0.00 2.40
638 641 4.935205 CCATCACTTTGACGTCCATAAGAA 59.065 41.667 21.62 13.02 0.00 2.52
639 642 4.503910 CCATCACTTTGACGTCCATAAGA 58.496 43.478 21.62 12.39 0.00 2.10
640 643 3.063997 GCCATCACTTTGACGTCCATAAG 59.936 47.826 14.12 15.39 0.00 1.73
641 644 3.006940 GCCATCACTTTGACGTCCATAA 58.993 45.455 14.12 3.97 0.00 1.90
642 645 2.027653 TGCCATCACTTTGACGTCCATA 60.028 45.455 14.12 0.00 0.00 2.74
643 646 1.271325 TGCCATCACTTTGACGTCCAT 60.271 47.619 14.12 0.00 0.00 3.41
644 647 0.107643 TGCCATCACTTTGACGTCCA 59.892 50.000 14.12 0.00 0.00 4.02
645 648 1.234821 TTGCCATCACTTTGACGTCC 58.765 50.000 14.12 0.00 0.00 4.79
646 649 3.236816 CATTTGCCATCACTTTGACGTC 58.763 45.455 9.11 9.11 0.00 4.34
647 650 2.030007 CCATTTGCCATCACTTTGACGT 60.030 45.455 0.00 0.00 0.00 4.34
648 651 2.030007 ACCATTTGCCATCACTTTGACG 60.030 45.455 0.00 0.00 0.00 4.35
649 652 3.256631 AGACCATTTGCCATCACTTTGAC 59.743 43.478 0.00 0.00 0.00 3.18
650 653 3.499338 AGACCATTTGCCATCACTTTGA 58.501 40.909 0.00 0.00 0.00 2.69
651 654 3.947910 AGACCATTTGCCATCACTTTG 57.052 42.857 0.00 0.00 0.00 2.77
652 655 4.590222 AGAAAGACCATTTGCCATCACTTT 59.410 37.500 0.00 0.00 0.00 2.66
653 656 4.154942 AGAAAGACCATTTGCCATCACTT 58.845 39.130 0.00 0.00 0.00 3.16
654 657 3.771216 AGAAAGACCATTTGCCATCACT 58.229 40.909 0.00 0.00 0.00 3.41
655 658 4.219288 AGAAGAAAGACCATTTGCCATCAC 59.781 41.667 0.00 0.00 0.00 3.06
656 659 4.219070 CAGAAGAAAGACCATTTGCCATCA 59.781 41.667 0.00 0.00 0.00 3.07
657 660 4.741342 CAGAAGAAAGACCATTTGCCATC 58.259 43.478 0.00 0.00 0.00 3.51
658 661 3.056322 GCAGAAGAAAGACCATTTGCCAT 60.056 43.478 0.00 0.00 0.00 4.40
659 662 2.297033 GCAGAAGAAAGACCATTTGCCA 59.703 45.455 0.00 0.00 0.00 4.92
660 663 2.297033 TGCAGAAGAAAGACCATTTGCC 59.703 45.455 0.00 0.00 0.00 4.52
661 664 3.648339 TGCAGAAGAAAGACCATTTGC 57.352 42.857 0.00 0.00 0.00 3.68
662 665 5.192327 AGTTGCAGAAGAAAGACCATTTG 57.808 39.130 0.00 0.00 0.00 2.32
663 666 5.859205 AAGTTGCAGAAGAAAGACCATTT 57.141 34.783 0.00 0.00 0.00 2.32
664 667 5.221322 GGAAAGTTGCAGAAGAAAGACCATT 60.221 40.000 0.00 0.00 0.00 3.16
665 668 4.279420 GGAAAGTTGCAGAAGAAAGACCAT 59.721 41.667 0.00 0.00 0.00 3.55
666 669 3.632145 GGAAAGTTGCAGAAGAAAGACCA 59.368 43.478 0.00 0.00 0.00 4.02
667 670 3.632145 TGGAAAGTTGCAGAAGAAAGACC 59.368 43.478 0.00 0.00 0.00 3.85
668 671 4.900635 TGGAAAGTTGCAGAAGAAAGAC 57.099 40.909 0.00 0.00 0.00 3.01
678 681 1.001487 CGAACATGCTGGAAAGTTGCA 60.001 47.619 0.00 0.00 41.13 4.08
679 682 1.001378 ACGAACATGCTGGAAAGTTGC 60.001 47.619 0.00 0.00 0.00 4.17
680 683 2.662791 CGACGAACATGCTGGAAAGTTG 60.663 50.000 0.00 0.00 0.00 3.16
681 684 1.531149 CGACGAACATGCTGGAAAGTT 59.469 47.619 0.00 0.00 0.00 2.66
682 685 1.148310 CGACGAACATGCTGGAAAGT 58.852 50.000 0.00 0.00 0.00 2.66
683 686 0.443869 CCGACGAACATGCTGGAAAG 59.556 55.000 0.00 0.00 0.00 2.62
684 687 1.573829 GCCGACGAACATGCTGGAAA 61.574 55.000 0.00 0.00 0.00 3.13
685 688 2.032634 GCCGACGAACATGCTGGAA 61.033 57.895 0.00 0.00 0.00 3.53
686 689 2.434185 GCCGACGAACATGCTGGA 60.434 61.111 0.00 0.00 0.00 3.86
687 690 2.741985 TGCCGACGAACATGCTGG 60.742 61.111 0.00 0.00 0.00 4.85
688 691 0.735978 TACTGCCGACGAACATGCTG 60.736 55.000 0.00 0.00 0.00 4.41
689 692 0.736325 GTACTGCCGACGAACATGCT 60.736 55.000 0.00 0.00 0.00 3.79
690 693 1.011968 TGTACTGCCGACGAACATGC 61.012 55.000 0.00 0.00 0.00 4.06
691 694 1.424403 TTGTACTGCCGACGAACATG 58.576 50.000 0.00 0.00 0.00 3.21
692 695 1.999735 CATTGTACTGCCGACGAACAT 59.000 47.619 0.00 0.00 0.00 2.71
693 696 1.269883 ACATTGTACTGCCGACGAACA 60.270 47.619 0.00 0.00 0.00 3.18
694 697 1.425412 ACATTGTACTGCCGACGAAC 58.575 50.000 0.00 0.00 0.00 3.95
695 698 2.157834 AACATTGTACTGCCGACGAA 57.842 45.000 0.00 0.00 0.00 3.85
696 699 2.157834 AAACATTGTACTGCCGACGA 57.842 45.000 0.00 0.00 0.00 4.20
697 700 2.961522 AAAACATTGTACTGCCGACG 57.038 45.000 0.00 0.00 0.00 5.12
698 701 3.435671 AGCTAAAACATTGTACTGCCGAC 59.564 43.478 0.00 0.00 0.00 4.79
699 702 3.670625 AGCTAAAACATTGTACTGCCGA 58.329 40.909 0.00 0.00 0.00 5.54
700 703 4.419522 AAGCTAAAACATTGTACTGCCG 57.580 40.909 0.00 0.00 0.00 5.69
701 704 6.852664 ACATAAGCTAAAACATTGTACTGCC 58.147 36.000 0.00 0.00 0.00 4.85
702 705 7.752695 AGACATAAGCTAAAACATTGTACTGC 58.247 34.615 0.00 0.00 0.00 4.40
705 708 9.704098 GCTAAGACATAAGCTAAAACATTGTAC 57.296 33.333 0.00 0.00 35.80 2.90
718 721 9.405587 CAAACTAGATCTAGCTAAGACATAAGC 57.594 37.037 26.50 0.00 36.93 3.09
721 724 8.788806 GCTCAAACTAGATCTAGCTAAGACATA 58.211 37.037 26.50 5.14 36.93 2.29
722 725 7.505585 AGCTCAAACTAGATCTAGCTAAGACAT 59.494 37.037 26.50 4.71 38.48 3.06
723 726 6.831353 AGCTCAAACTAGATCTAGCTAAGACA 59.169 38.462 26.50 6.44 38.48 3.41
724 727 7.228706 AGAGCTCAAACTAGATCTAGCTAAGAC 59.771 40.741 26.50 14.02 40.35 3.01
725 728 7.287061 AGAGCTCAAACTAGATCTAGCTAAGA 58.713 38.462 26.50 18.08 40.35 2.10
726 729 7.510549 AGAGCTCAAACTAGATCTAGCTAAG 57.489 40.000 26.50 19.09 40.35 2.18
727 730 8.215050 AGTAGAGCTCAAACTAGATCTAGCTAA 58.785 37.037 26.50 10.53 43.23 3.09
728 731 7.741785 AGTAGAGCTCAAACTAGATCTAGCTA 58.258 38.462 26.50 15.02 43.23 3.32
729 732 6.601332 AGTAGAGCTCAAACTAGATCTAGCT 58.399 40.000 26.50 20.21 43.23 3.32
730 733 6.877611 AGTAGAGCTCAAACTAGATCTAGC 57.122 41.667 26.50 15.98 43.23 3.42
731 734 9.204570 GACTAGTAGAGCTCAAACTAGATCTAG 57.795 40.741 37.53 25.26 43.23 2.43
732 735 8.152246 GGACTAGTAGAGCTCAAACTAGATCTA 58.848 40.741 37.53 18.35 43.49 1.98
733 736 6.996282 GGACTAGTAGAGCTCAAACTAGATCT 59.004 42.308 37.53 26.08 43.49 2.75
734 737 6.768861 TGGACTAGTAGAGCTCAAACTAGATC 59.231 42.308 37.53 31.22 43.49 2.75
735 738 6.664714 TGGACTAGTAGAGCTCAAACTAGAT 58.335 40.000 37.53 28.26 43.49 1.98
736 739 6.063496 TGGACTAGTAGAGCTCAAACTAGA 57.937 41.667 37.53 24.56 43.49 2.43
737 740 6.320164 ACATGGACTAGTAGAGCTCAAACTAG 59.680 42.308 33.35 33.35 45.33 2.57
738 741 6.188407 ACATGGACTAGTAGAGCTCAAACTA 58.812 40.000 17.77 19.92 0.00 2.24
739 742 5.020132 ACATGGACTAGTAGAGCTCAAACT 58.980 41.667 21.20 21.20 0.00 2.66
740 743 5.331876 ACATGGACTAGTAGAGCTCAAAC 57.668 43.478 17.77 13.56 0.00 2.93
741 744 7.661536 AATACATGGACTAGTAGAGCTCAAA 57.338 36.000 17.77 0.00 0.00 2.69
742 745 7.661536 AAATACATGGACTAGTAGAGCTCAA 57.338 36.000 17.77 0.00 0.00 3.02
743 746 7.661536 AAAATACATGGACTAGTAGAGCTCA 57.338 36.000 17.77 0.00 0.00 4.26
744 747 8.198109 TGAAAAATACATGGACTAGTAGAGCTC 58.802 37.037 5.27 5.27 0.00 4.09
745 748 8.079211 TGAAAAATACATGGACTAGTAGAGCT 57.921 34.615 3.59 0.00 0.00 4.09
746 749 8.894768 ATGAAAAATACATGGACTAGTAGAGC 57.105 34.615 3.59 0.00 0.00 4.09
748 751 9.529325 CGAATGAAAAATACATGGACTAGTAGA 57.471 33.333 3.59 0.00 0.00 2.59
749 752 8.765219 CCGAATGAAAAATACATGGACTAGTAG 58.235 37.037 0.00 0.00 0.00 2.57
750 753 7.225931 GCCGAATGAAAAATACATGGACTAGTA 59.774 37.037 0.00 0.00 0.00 1.82
751 754 6.038271 GCCGAATGAAAAATACATGGACTAGT 59.962 38.462 0.00 0.00 0.00 2.57
752 755 6.260936 AGCCGAATGAAAAATACATGGACTAG 59.739 38.462 0.00 0.00 0.00 2.57
753 756 6.119536 AGCCGAATGAAAAATACATGGACTA 58.880 36.000 0.00 0.00 0.00 2.59
754 757 4.949856 AGCCGAATGAAAAATACATGGACT 59.050 37.500 0.00 0.00 0.00 3.85
755 758 5.248870 AGCCGAATGAAAAATACATGGAC 57.751 39.130 0.00 0.00 0.00 4.02
756 759 4.338118 GGAGCCGAATGAAAAATACATGGA 59.662 41.667 0.00 0.00 0.00 3.41
757 760 4.610945 GGAGCCGAATGAAAAATACATGG 58.389 43.478 0.00 0.00 0.00 3.66
758 761 4.282068 CGGAGCCGAATGAAAAATACATG 58.718 43.478 2.00 0.00 42.83 3.21
759 762 3.315191 CCGGAGCCGAATGAAAAATACAT 59.685 43.478 11.05 0.00 42.83 2.29
760 763 2.680841 CCGGAGCCGAATGAAAAATACA 59.319 45.455 11.05 0.00 42.83 2.29
761 764 2.940410 TCCGGAGCCGAATGAAAAATAC 59.060 45.455 11.05 0.00 42.83 1.89
762 765 3.269538 TCCGGAGCCGAATGAAAAATA 57.730 42.857 11.05 0.00 42.83 1.40
763 766 2.122783 TCCGGAGCCGAATGAAAAAT 57.877 45.000 11.05 0.00 42.83 1.82
764 767 2.122783 ATCCGGAGCCGAATGAAAAA 57.877 45.000 11.34 0.00 42.83 1.94
765 768 1.742831 CAATCCGGAGCCGAATGAAAA 59.257 47.619 11.34 0.00 42.83 2.29
766 769 1.378531 CAATCCGGAGCCGAATGAAA 58.621 50.000 11.34 0.00 42.83 2.69
767 770 1.095228 GCAATCCGGAGCCGAATGAA 61.095 55.000 11.34 0.00 42.83 2.57
768 771 1.523711 GCAATCCGGAGCCGAATGA 60.524 57.895 11.34 0.00 42.83 2.57
769 772 1.168407 ATGCAATCCGGAGCCGAATG 61.168 55.000 11.34 7.27 42.83 2.67
770 773 0.886490 GATGCAATCCGGAGCCGAAT 60.886 55.000 11.34 0.00 37.38 3.34
771 774 1.523711 GATGCAATCCGGAGCCGAA 60.524 57.895 11.34 0.00 37.38 4.30
772 775 2.108976 GATGCAATCCGGAGCCGA 59.891 61.111 11.34 0.00 37.38 5.54
781 784 0.755686 AGAGTCTCCCGGATGCAATC 59.244 55.000 0.73 0.00 44.55 2.67
782 785 1.207791 AAGAGTCTCCCGGATGCAAT 58.792 50.000 0.73 0.00 0.00 3.56
783 786 0.984230 AAAGAGTCTCCCGGATGCAA 59.016 50.000 0.73 0.00 0.00 4.08
784 787 0.250234 CAAAGAGTCTCCCGGATGCA 59.750 55.000 0.73 0.00 0.00 3.96
785 788 0.250513 ACAAAGAGTCTCCCGGATGC 59.749 55.000 0.73 0.00 0.00 3.91
786 789 3.887621 TTACAAAGAGTCTCCCGGATG 57.112 47.619 0.73 0.00 0.00 3.51
787 790 5.437191 AATTTACAAAGAGTCTCCCGGAT 57.563 39.130 0.73 0.00 0.00 4.18
788 791 4.903045 AATTTACAAAGAGTCTCCCGGA 57.097 40.909 0.73 0.00 0.00 5.14
789 792 4.760204 ACAAATTTACAAAGAGTCTCCCGG 59.240 41.667 0.00 0.00 0.00 5.73
790 793 5.941948 ACAAATTTACAAAGAGTCTCCCG 57.058 39.130 0.00 0.00 0.00 5.14
791 794 6.040504 ACCAACAAATTTACAAAGAGTCTCCC 59.959 38.462 0.00 0.00 0.00 4.30
792 795 7.039313 ACCAACAAATTTACAAAGAGTCTCC 57.961 36.000 0.00 0.00 0.00 3.71
793 796 8.188139 TCAACCAACAAATTTACAAAGAGTCTC 58.812 33.333 0.00 0.00 0.00 3.36
794 797 8.062065 TCAACCAACAAATTTACAAAGAGTCT 57.938 30.769 0.00 0.00 0.00 3.24
795 798 8.871686 ATCAACCAACAAATTTACAAAGAGTC 57.128 30.769 0.00 0.00 0.00 3.36
796 799 8.474025 TGATCAACCAACAAATTTACAAAGAGT 58.526 29.630 0.00 0.00 0.00 3.24
797 800 8.870160 TGATCAACCAACAAATTTACAAAGAG 57.130 30.769 0.00 0.00 0.00 2.85
798 801 9.829507 ATTGATCAACCAACAAATTTACAAAGA 57.170 25.926 11.07 0.00 0.00 2.52
805 808 9.271828 GGTCTTTATTGATCAACCAACAAATTT 57.728 29.630 11.07 0.00 0.00 1.82
806 809 7.598493 CGGTCTTTATTGATCAACCAACAAATT 59.402 33.333 11.07 0.00 0.00 1.82
807 810 7.040062 TCGGTCTTTATTGATCAACCAACAAAT 60.040 33.333 11.07 0.00 0.00 2.32
808 811 6.263392 TCGGTCTTTATTGATCAACCAACAAA 59.737 34.615 11.07 5.72 0.00 2.83
809 812 5.765677 TCGGTCTTTATTGATCAACCAACAA 59.234 36.000 11.07 0.00 0.00 2.83
810 813 5.180492 GTCGGTCTTTATTGATCAACCAACA 59.820 40.000 11.07 0.00 0.00 3.33
811 814 5.628134 GTCGGTCTTTATTGATCAACCAAC 58.372 41.667 11.07 0.00 0.00 3.77
812 815 4.390603 CGTCGGTCTTTATTGATCAACCAA 59.609 41.667 11.07 5.25 0.00 3.67
813 816 3.930229 CGTCGGTCTTTATTGATCAACCA 59.070 43.478 11.07 0.00 0.00 3.67
814 817 3.930848 ACGTCGGTCTTTATTGATCAACC 59.069 43.478 11.07 6.09 0.00 3.77
815 818 5.526010 AACGTCGGTCTTTATTGATCAAC 57.474 39.130 11.07 0.00 0.00 3.18
816 819 4.325204 CGAACGTCGGTCTTTATTGATCAA 59.675 41.667 11.26 11.26 36.00 2.57
817 820 3.855379 CGAACGTCGGTCTTTATTGATCA 59.145 43.478 8.93 0.00 36.00 2.92
818 821 3.301643 GCGAACGTCGGTCTTTATTGATC 60.302 47.826 8.93 0.00 40.84 2.92
819 822 2.601763 GCGAACGTCGGTCTTTATTGAT 59.398 45.455 8.93 0.00 40.84 2.57
820 823 1.987770 GCGAACGTCGGTCTTTATTGA 59.012 47.619 8.93 0.00 40.84 2.57
821 824 2.414768 GCGAACGTCGGTCTTTATTG 57.585 50.000 8.93 0.00 40.84 1.90
844 847 2.997303 GGTGAACGCCAACTTTGTTTTT 59.003 40.909 0.00 0.00 0.00 1.94
845 848 2.612604 GGTGAACGCCAACTTTGTTTT 58.387 42.857 0.00 0.00 0.00 2.43
846 849 1.134936 GGGTGAACGCCAACTTTGTTT 60.135 47.619 6.73 0.00 31.66 2.83
857 860 2.960129 CGCTATCGGGGTGAACGC 60.960 66.667 0.00 0.00 0.00 4.84
1243 1257 2.032634 TGCCAACGCAGATCGAACC 61.033 57.895 0.00 0.00 41.12 3.62
1344 1542 3.728845 GTCAACAGTTCAACTAGCAGGA 58.271 45.455 0.00 0.00 0.00 3.86
1365 1563 2.002586 ACACATTTCGCTTCAGATCCG 58.997 47.619 0.00 0.00 0.00 4.18
1370 1568 2.912967 GCAATCACACATTTCGCTTCAG 59.087 45.455 0.00 0.00 0.00 3.02
1422 1620 7.831193 ACAACTAAGTCAGGCAAAGATATGATT 59.169 33.333 0.00 0.00 0.00 2.57
1448 1646 4.334552 TGCAAAGTAAGCAATGGAGATGA 58.665 39.130 0.00 0.00 39.39 2.92
1493 1691 4.010667 ACATCTGTTTGGCGGTAACTTA 57.989 40.909 0.00 0.00 0.00 2.24
1574 1776 8.217799 TCATTCGGGAAAAATAAGTCATATCCT 58.782 33.333 0.00 0.00 0.00 3.24
1595 1806 9.303537 GGTGTGAGTCTAATTAGTACTTCATTC 57.696 37.037 12.19 0.00 0.00 2.67
1606 1817 6.636454 ATTTCCCAGGTGTGAGTCTAATTA 57.364 37.500 0.00 0.00 0.00 1.40
1923 2134 9.120538 GCTAATTTTCCAGTCCATGACTTATTA 57.879 33.333 0.00 0.00 41.37 0.98
2088 2299 3.658705 TGTAGGGTCCCTTTGGTTTGTAT 59.341 43.478 17.94 0.00 34.61 2.29
2112 2323 0.804989 CAACGGAGACAATTGAGGCC 59.195 55.000 13.59 8.62 0.00 5.19
2331 3028 3.868077 CACTAGCGATCAAAGGAAAGGAG 59.132 47.826 0.00 0.00 0.00 3.69
2338 3035 4.631377 TCAACATTCACTAGCGATCAAAGG 59.369 41.667 0.00 0.00 0.00 3.11
2340 3037 5.874261 TGATCAACATTCACTAGCGATCAAA 59.126 36.000 0.00 0.00 35.95 2.69
2443 3169 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
2455 3181 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
2469 3195 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
2506 3232 2.240414 TGCCTTGTGACCATGAGATCAT 59.760 45.455 0.00 0.00 36.96 2.45
2507 3233 1.629861 TGCCTTGTGACCATGAGATCA 59.370 47.619 0.00 0.00 0.00 2.92
2508 3234 2.408271 TGCCTTGTGACCATGAGATC 57.592 50.000 0.00 0.00 0.00 2.75
2509 3235 2.224843 TGTTGCCTTGTGACCATGAGAT 60.225 45.455 0.00 0.00 0.00 2.75
2510 3236 1.142667 TGTTGCCTTGTGACCATGAGA 59.857 47.619 0.00 0.00 0.00 3.27
2511 3237 1.538512 CTGTTGCCTTGTGACCATGAG 59.461 52.381 0.00 0.00 0.00 2.90
2512 3238 1.608055 CTGTTGCCTTGTGACCATGA 58.392 50.000 0.00 0.00 0.00 3.07
2513 3239 0.038892 GCTGTTGCCTTGTGACCATG 60.039 55.000 0.00 0.00 0.00 3.66
2514 3240 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
2515 3241 0.395586 AAGCTGTTGCCTTGTGACCA 60.396 50.000 0.00 0.00 40.80 4.02
2516 3242 0.746659 AAAGCTGTTGCCTTGTGACC 59.253 50.000 0.00 0.00 40.80 4.02
2517 3243 2.287608 GGTAAAGCTGTTGCCTTGTGAC 60.288 50.000 7.98 0.00 40.80 3.67
2518 3244 1.953686 GGTAAAGCTGTTGCCTTGTGA 59.046 47.619 7.98 0.00 40.80 3.58
2519 3245 1.334960 CGGTAAAGCTGTTGCCTTGTG 60.335 52.381 11.70 0.00 40.80 3.33
2520 3246 0.951558 CGGTAAAGCTGTTGCCTTGT 59.048 50.000 11.70 0.00 40.80 3.16
2521 3247 0.387239 GCGGTAAAGCTGTTGCCTTG 60.387 55.000 11.70 2.30 40.80 3.61
2522 3248 1.956802 GCGGTAAAGCTGTTGCCTT 59.043 52.632 11.70 0.00 40.80 4.35
2523 3249 3.668386 GCGGTAAAGCTGTTGCCT 58.332 55.556 11.70 0.00 40.80 4.75
2591 3318 9.148879 TGATGGTTTAAATTTCTGACCCTTTTA 57.851 29.630 12.40 0.00 0.00 1.52
2677 3426 5.067805 GGCGACCCAATTCTAAATTGAAGAT 59.932 40.000 12.73 0.00 0.00 2.40
2835 3592 6.994868 TTGATTTGAAAAATCGTTAACCCG 57.005 33.333 0.00 0.00 0.00 5.28
2927 3684 6.549433 AGTATCAAACCGGTACCATTAGAA 57.451 37.500 8.00 0.00 0.00 2.10
3041 3799 7.484959 GGGTTTTCATAATTTTTCTACTCGCAG 59.515 37.037 0.00 0.00 0.00 5.18
3044 3802 9.124807 GTTGGGTTTTCATAATTTTTCTACTCG 57.875 33.333 0.00 0.00 0.00 4.18
3173 4090 2.039216 TGCAACCCAAGACTCGGAAATA 59.961 45.455 0.00 0.00 0.00 1.40
3214 4131 4.853924 ACACTAGATTTTGCAACCCAAG 57.146 40.909 0.00 0.00 34.34 3.61
3215 4132 5.606348 AAACACTAGATTTTGCAACCCAA 57.394 34.783 0.00 0.00 0.00 4.12
3216 4133 6.491745 TCATAAACACTAGATTTTGCAACCCA 59.508 34.615 0.00 0.00 0.00 4.51
3217 4134 6.919721 TCATAAACACTAGATTTTGCAACCC 58.080 36.000 0.00 0.00 0.00 4.11
3218 4135 8.986477 AATCATAAACACTAGATTTTGCAACC 57.014 30.769 0.00 0.00 0.00 3.77
3219 4136 9.846248 AGAATCATAAACACTAGATTTTGCAAC 57.154 29.630 0.00 0.00 31.35 4.17
3221 4138 9.844790 CAAGAATCATAAACACTAGATTTTGCA 57.155 29.630 0.00 0.00 31.35 4.08
3222 4139 9.294030 CCAAGAATCATAAACACTAGATTTTGC 57.706 33.333 0.00 0.00 31.35 3.68
3223 4140 9.793252 CCCAAGAATCATAAACACTAGATTTTG 57.207 33.333 0.00 0.00 31.35 2.44
3224 4141 9.533831 ACCCAAGAATCATAAACACTAGATTTT 57.466 29.630 0.00 0.00 31.35 1.82
3225 4142 9.533831 AACCCAAGAATCATAAACACTAGATTT 57.466 29.630 0.00 0.00 31.35 2.17
3226 4143 8.960591 CAACCCAAGAATCATAAACACTAGATT 58.039 33.333 0.00 0.00 33.70 2.40
3227 4144 7.067494 GCAACCCAAGAATCATAAACACTAGAT 59.933 37.037 0.00 0.00 0.00 1.98
3228 4145 6.374333 GCAACCCAAGAATCATAAACACTAGA 59.626 38.462 0.00 0.00 0.00 2.43
3229 4146 6.375455 AGCAACCCAAGAATCATAAACACTAG 59.625 38.462 0.00 0.00 0.00 2.57
3230 4147 6.150976 CAGCAACCCAAGAATCATAAACACTA 59.849 38.462 0.00 0.00 0.00 2.74
3231 4148 5.047802 CAGCAACCCAAGAATCATAAACACT 60.048 40.000 0.00 0.00 0.00 3.55
3232 4149 5.048083 TCAGCAACCCAAGAATCATAAACAC 60.048 40.000 0.00 0.00 0.00 3.32
3233 4150 5.048083 GTCAGCAACCCAAGAATCATAAACA 60.048 40.000 0.00 0.00 0.00 2.83
3234 4151 5.048083 TGTCAGCAACCCAAGAATCATAAAC 60.048 40.000 0.00 0.00 0.00 2.01
3235 4152 5.076182 TGTCAGCAACCCAAGAATCATAAA 58.924 37.500 0.00 0.00 0.00 1.40
3236 4153 4.661222 TGTCAGCAACCCAAGAATCATAA 58.339 39.130 0.00 0.00 0.00 1.90
3237 4154 4.299586 TGTCAGCAACCCAAGAATCATA 57.700 40.909 0.00 0.00 0.00 2.15
3238 4155 3.159213 TGTCAGCAACCCAAGAATCAT 57.841 42.857 0.00 0.00 0.00 2.45
3239 4156 2.655090 TGTCAGCAACCCAAGAATCA 57.345 45.000 0.00 0.00 0.00 2.57
3240 4157 5.357878 TCATATTGTCAGCAACCCAAGAATC 59.642 40.000 0.00 0.00 37.44 2.52
3241 4158 5.126061 GTCATATTGTCAGCAACCCAAGAAT 59.874 40.000 0.00 0.00 37.44 2.40
3242 4159 4.458989 GTCATATTGTCAGCAACCCAAGAA 59.541 41.667 0.00 0.00 37.44 2.52
3243 4160 4.009675 GTCATATTGTCAGCAACCCAAGA 58.990 43.478 0.00 0.00 37.44 3.02
3486 4792 6.740411 ATAGAATAGAGTCGGACGGTATTC 57.260 41.667 23.83 23.83 32.50 1.75
3797 5103 3.588842 CCCCATCCTGCCAGATCTATTAA 59.411 47.826 0.00 0.00 0.00 1.40
3858 5183 6.920758 CAGAAGACGAGAAGGTCCTAATATTG 59.079 42.308 0.00 0.00 37.66 1.90
3865 5190 2.296073 ACAGAAGACGAGAAGGTCCT 57.704 50.000 0.00 0.00 37.66 3.85
3906 5231 8.143193 CAGCCTATGCATTAAAAATTCCACATA 58.857 33.333 3.54 0.00 41.13 2.29
3908 5233 6.070881 ACAGCCTATGCATTAAAAATTCCACA 60.071 34.615 3.54 0.00 41.13 4.17
3919 5244 5.928976 ACTATGTTCACAGCCTATGCATTA 58.071 37.500 3.54 0.00 41.13 1.90
3964 5324 7.111179 GCTAAACAGTTAAAGTACAGAAAACGC 59.889 37.037 0.00 0.00 0.00 4.84
3965 5325 8.117988 TGCTAAACAGTTAAAGTACAGAAAACG 58.882 33.333 0.00 0.00 0.00 3.60
3966 5326 9.946165 ATGCTAAACAGTTAAAGTACAGAAAAC 57.054 29.630 0.00 0.00 0.00 2.43
4144 5520 5.067674 CAGACCACCAAACTTGAAAGATGAA 59.932 40.000 0.00 0.00 0.00 2.57
4145 5521 4.580167 CAGACCACCAAACTTGAAAGATGA 59.420 41.667 0.00 0.00 0.00 2.92
4195 5571 1.479730 TCATAGAGCAGGCTGTCAGTG 59.520 52.381 17.16 13.52 0.00 3.66
4313 5689 7.126421 AGAGAACTGGACCATAGTATTCACAAT 59.874 37.037 0.00 0.00 0.00 2.71
4372 5748 6.992063 AGTCAAGCACAAATATAACCAGAG 57.008 37.500 0.00 0.00 0.00 3.35
4406 5782 3.742882 TCAGCTCAAACAAGAATCAGTCG 59.257 43.478 0.00 0.00 0.00 4.18
4424 5800 1.200948 GCCCATGAAACTTGAGTCAGC 59.799 52.381 0.00 0.00 0.00 4.26
4440 5816 0.909133 TGTCATACCTGCAGAGCCCA 60.909 55.000 17.39 0.83 0.00 5.36
4491 5867 1.271817 TGCACATACATCTTGCCACCA 60.272 47.619 0.00 0.00 35.26 4.17
4517 5893 4.133820 CTCATCACTGTACTCCTCGATCT 58.866 47.826 0.00 0.00 0.00 2.75
4539 5915 5.126707 ACCATCATCCAAAAGCTTGAAGATC 59.873 40.000 0.00 0.00 34.14 2.75
4601 5977 1.625315 TGAGTGTGTCCTGAATCCCTG 59.375 52.381 0.00 0.00 0.00 4.45
4727 6103 4.951094 TCCCCGGGAAACAATAATTAACAG 59.049 41.667 26.32 0.00 0.00 3.16
4865 6365 1.098129 GTAAGCTAGCTGCAAGGGCC 61.098 60.000 20.16 0.00 45.94 5.80
4872 6372 1.202475 GGACAGGAGTAAGCTAGCTGC 60.202 57.143 20.16 14.48 43.29 5.25
4906 6406 5.177511 GCAGGAAAAGCTACATTTGAAAACC 59.822 40.000 0.00 0.00 0.00 3.27
4910 6410 4.584325 ACAGCAGGAAAAGCTACATTTGAA 59.416 37.500 0.00 0.00 41.14 2.69
4953 6487 8.978874 TTGCTCTTCTGGATATATTTTTAGCA 57.021 30.769 0.00 0.00 33.62 3.49
5029 6563 8.844244 AGACTTAAGGCATCAATCACATAAATC 58.156 33.333 11.83 0.00 0.00 2.17
5171 6706 1.514678 TTGCATGTCCAGGAACGCAC 61.515 55.000 7.98 0.00 0.00 5.34
5189 6724 4.645535 TCTTCTGCTTGTCATACTGCTTT 58.354 39.130 0.00 0.00 0.00 3.51
5350 6886 7.743400 GCTGAAAGTTACACGTTACCTAAATTC 59.257 37.037 0.00 0.00 35.30 2.17
5368 6904 4.466015 TGAACAAAAAGGGAAGCTGAAAGT 59.534 37.500 0.00 0.00 35.30 2.66
5396 9886 5.247862 TCACAAGATTTGCATGAGAGCTTA 58.752 37.500 0.00 0.00 34.99 3.09
5478 9968 7.012421 AGCTATTCTTTGTAGAAATTAAGGCGG 59.988 37.037 0.00 0.00 43.32 6.13
5480 9970 8.893727 TCAGCTATTCTTTGTAGAAATTAAGGC 58.106 33.333 0.00 0.00 43.32 4.35
5520 10013 5.661458 TGAAATGAGTTTTACCCGCAAAAA 58.339 33.333 0.00 0.00 0.00 1.94
5522 10015 4.920640 TGAAATGAGTTTTACCCGCAAA 57.079 36.364 0.00 0.00 0.00 3.68
5523 10016 6.207810 AGTTATGAAATGAGTTTTACCCGCAA 59.792 34.615 0.00 0.00 0.00 4.85
5524 10017 5.708230 AGTTATGAAATGAGTTTTACCCGCA 59.292 36.000 0.00 0.00 0.00 5.69
5525 10018 6.128117 TGAGTTATGAAATGAGTTTTACCCGC 60.128 38.462 0.00 0.00 0.00 6.13
5526 10019 7.372451 TGAGTTATGAAATGAGTTTTACCCG 57.628 36.000 0.00 0.00 0.00 5.28
5532 10025 9.520515 ACACCTTATGAGTTATGAAATGAGTTT 57.479 29.630 0.00 0.00 0.00 2.66
5542 10035 9.193133 CGGAAAGTATACACCTTATGAGTTATG 57.807 37.037 5.50 0.00 0.00 1.90
5543 10036 8.921205 ACGGAAAGTATACACCTTATGAGTTAT 58.079 33.333 5.50 0.00 0.00 1.89
5544 10037 8.192774 CACGGAAAGTATACACCTTATGAGTTA 58.807 37.037 5.50 0.00 0.00 2.24
5545 10038 7.039882 CACGGAAAGTATACACCTTATGAGTT 58.960 38.462 5.50 0.00 0.00 3.01
5647 12905 4.889409 ACTGAAATGAGTGGACAAACACAT 59.111 37.500 0.00 0.00 43.72 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.