Multiple sequence alignment - TraesCS2D01G252700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G252700 chr2D 100.000 6564 0 0 1233 7796 304655980 304662543 0.000000e+00 12122.0
1 TraesCS2D01G252700 chr2D 100.000 1086 0 0 1 1086 304654748 304655833 0.000000e+00 2006.0
2 TraesCS2D01G252700 chr2A 95.831 6333 175 34 1233 7506 382814186 382820488 0.000000e+00 10150.0
3 TraesCS2D01G252700 chr2A 86.585 574 54 11 533 1086 382813576 382814146 5.170000e-171 612.0
4 TraesCS2D01G252700 chr2A 86.919 344 32 7 6 338 382813229 382813570 2.660000e-99 374.0
5 TraesCS2D01G252700 chr2A 95.000 120 5 1 7486 7605 382821490 382821608 3.710000e-43 187.0
6 TraesCS2D01G252700 chr2B 97.303 2929 46 7 3710 6631 373311294 373314196 0.000000e+00 4940.0
7 TraesCS2D01G252700 chr2B 96.467 2434 68 12 1237 3666 373308877 373311296 0.000000e+00 4002.0
8 TraesCS2D01G252700 chr2B 92.438 648 23 11 6682 7316 373314347 373314981 0.000000e+00 902.0
9 TraesCS2D01G252700 chr2B 95.238 210 5 1 809 1018 373308249 373308453 2.100000e-85 327.0
10 TraesCS2D01G252700 chr2B 95.429 175 8 0 372 546 713695959 713695785 5.960000e-71 279.0
11 TraesCS2D01G252700 chr2B 85.714 189 16 7 644 823 373308041 373308227 1.030000e-43 189.0
12 TraesCS2D01G252700 chr2B 96.364 55 1 1 7439 7492 373317792 373317846 1.080000e-13 89.8
13 TraesCS2D01G252700 chr2B 90.769 65 3 3 7377 7441 373317712 373317773 5.010000e-12 84.2
14 TraesCS2D01G252700 chr7D 98.802 167 2 0 368 534 18809316 18809482 1.640000e-76 298.0
15 TraesCS2D01G252700 chr7D 95.349 172 8 0 368 539 121683296 121683125 2.770000e-69 274.0
16 TraesCS2D01G252700 chr1D 98.795 166 2 0 372 537 23004237 23004072 5.910000e-76 296.0
17 TraesCS2D01G252700 chr1D 82.609 69 8 4 333 401 31301667 31301603 3.040000e-04 58.4
18 TraesCS2D01G252700 chr6D 98.193 166 3 0 372 537 90890282 90890447 2.750000e-74 291.0
19 TraesCS2D01G252700 chr6D 97.368 38 1 0 333 370 262264368 262264331 1.820000e-06 65.8
20 TraesCS2D01G252700 chr7B 98.171 164 3 0 371 534 115373864 115374027 3.560000e-73 287.0
21 TraesCS2D01G252700 chr7B 95.906 171 7 0 370 540 497576788 497576618 2.140000e-70 278.0
22 TraesCS2D01G252700 chr7B 95.556 45 0 1 333 377 487811830 487811872 3.900000e-08 71.3
23 TraesCS2D01G252700 chr3D 97.546 163 4 0 372 534 604180683 604180845 5.960000e-71 279.0
24 TraesCS2D01G252700 chr3D 97.368 38 1 0 333 370 380844674 380844711 1.820000e-06 65.8
25 TraesCS2D01G252700 chr6B 93.011 186 13 0 349 534 35822489 35822674 9.970000e-69 272.0
26 TraesCS2D01G252700 chr5D 93.023 43 1 1 333 375 498669788 498669748 2.350000e-05 62.1
27 TraesCS2D01G252700 chr5D 85.484 62 4 4 337 397 278275137 278275080 8.450000e-05 60.2
28 TraesCS2D01G252700 chr5B 84.848 66 4 2 337 396 218214309 218214374 2.350000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G252700 chr2D 304654748 304662543 7795 False 7064.000000 12122 100.000000 1 7796 2 chr2D.!!$F1 7795
1 TraesCS2D01G252700 chr2A 382813229 382821608 8379 False 2830.750000 10150 91.083750 6 7605 4 chr2A.!!$F1 7599
2 TraesCS2D01G252700 chr2B 373308041 373317846 9805 False 1504.857143 4940 93.470429 644 7492 7 chr2B.!!$F1 6848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
608 618 0.919710 AATCCCTGGCCTTCCTACAC 59.080 55.000 3.32 0.00 0.00 2.90 F
713 724 1.485397 CGCTCAGAGACAATCCGATG 58.515 55.000 0.00 0.00 0.00 3.84 F
1495 1782 1.588082 GTGGCATGGGCTTTCTGTG 59.412 57.895 0.00 0.00 40.87 3.66 F
2146 2436 0.245539 ATGTTGCTTCACATGCTGCC 59.754 50.000 0.00 0.00 35.97 4.85 F
3889 4186 0.396060 CCTGGAGAGGGAATAGCTGC 59.604 60.000 0.00 0.00 35.40 5.25 F
4663 4984 0.776810 TGGATGGGTTGCTGAAGGAA 59.223 50.000 0.00 0.00 0.00 3.36 F
4667 4988 0.843309 TGGGTTGCTGAAGGAACAGA 59.157 50.000 15.35 0.00 46.34 3.41 F
4668 4989 1.239347 GGGTTGCTGAAGGAACAGAC 58.761 55.000 15.35 3.08 46.34 3.51 F
4669 4990 1.476833 GGGTTGCTGAAGGAACAGACA 60.477 52.381 15.35 0.00 46.34 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 1732 0.037326 TCTGACGAATTCGCTGGCTT 60.037 50.000 27.03 6.94 44.43 4.35 R
1575 1862 1.267806 CTCGGTGAAGCTGTGCAAAAT 59.732 47.619 0.00 0.00 0.00 1.82 R
3333 3624 0.251634 TGCCATACATCCACGCAAGA 59.748 50.000 0.00 0.00 43.62 3.02 R
4066 4363 0.393537 CCAGCTCCCCACACAGAATC 60.394 60.000 0.00 0.00 0.00 2.52 R
4815 5136 2.026822 CAGATCTATTCCCATTCCCCCG 60.027 54.545 0.00 0.00 0.00 5.73 R
6326 6652 1.205655 TCTCCATTCGTTGCTCCTGAG 59.794 52.381 0.00 0.00 0.00 3.35 R
6612 6938 6.216456 AGGTTGGATCTCTAAGAAATGGAAGT 59.784 38.462 0.00 0.00 0.00 3.01 R
6683 7099 4.373156 AAACCAGGAAATCTGCAGTACT 57.627 40.909 14.67 0.00 42.05 2.73 R
6952 7382 8.324163 ACAATGCTTAACTTATTCGTCTTCTT 57.676 30.769 0.00 0.00 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 5.339008 TGTAGATGTCAATAGTGGTGTCC 57.661 43.478 0.00 0.00 0.00 4.02
94 95 3.526931 AGATGTCAATAGTGGTGTCCG 57.473 47.619 0.00 0.00 0.00 4.79
101 102 5.243507 TGTCAATAGTGGTGTCCGTTACTAA 59.756 40.000 0.00 0.00 0.00 2.24
108 109 4.209911 GTGGTGTCCGTTACTAAGTTTGAC 59.790 45.833 0.00 0.00 0.00 3.18
120 121 9.565213 GTTACTAAGTTTGACTAATCGAAGCTA 57.435 33.333 0.00 0.00 0.00 3.32
128 129 7.525688 TTGACTAATCGAAGCTACAGAAATG 57.474 36.000 0.00 0.00 0.00 2.32
130 131 7.492524 TGACTAATCGAAGCTACAGAAATGAT 58.507 34.615 0.00 0.00 0.00 2.45
137 138 9.764363 ATCGAAGCTACAGAAATGATATTAACA 57.236 29.630 0.00 0.00 0.00 2.41
161 162 7.226918 ACAGTAGAAAGTGAAAAGGTAAGAAGC 59.773 37.037 0.00 0.00 0.00 3.86
166 167 3.323979 AGTGAAAAGGTAAGAAGCGGAGA 59.676 43.478 0.00 0.00 0.00 3.71
170 171 0.976590 AGGTAAGAAGCGGAGACCCC 60.977 60.000 0.00 0.00 0.00 4.95
175 184 1.376037 GAAGCGGAGACCCCAAGTG 60.376 63.158 0.00 0.00 34.14 3.16
195 204 2.507886 TGTTGGGGACTTCTCTTGTGAA 59.492 45.455 0.00 0.00 0.00 3.18
223 233 3.529533 CTGCAACTGATGTAAGAGAGGG 58.470 50.000 0.00 0.00 0.00 4.30
229 239 2.762887 CTGATGTAAGAGAGGGTCAGCA 59.237 50.000 0.00 0.00 0.00 4.41
230 240 2.762887 TGATGTAAGAGAGGGTCAGCAG 59.237 50.000 0.00 0.00 0.00 4.24
233 243 1.754226 GTAAGAGAGGGTCAGCAGAGG 59.246 57.143 0.00 0.00 0.00 3.69
273 283 9.137459 TCTCCTCATATCTCTTTACTTAACTGG 57.863 37.037 0.00 0.00 0.00 4.00
274 284 8.251383 TCCTCATATCTCTTTACTTAACTGGG 57.749 38.462 0.00 0.00 0.00 4.45
282 292 8.064336 TCTCTTTACTTAACTGGGACATACTC 57.936 38.462 0.00 0.00 38.20 2.59
283 293 7.123847 TCTCTTTACTTAACTGGGACATACTCC 59.876 40.741 0.00 0.00 38.20 3.85
284 294 5.587388 TTACTTAACTGGGACATACTCCG 57.413 43.478 0.00 0.00 40.56 4.63
291 301 2.484651 CTGGGACATACTCCGTCTATCG 59.515 54.545 0.00 0.00 40.56 2.92
303 313 3.446161 TCCGTCTATCGTTTTGAGTGGAT 59.554 43.478 0.00 0.00 37.94 3.41
308 318 5.520649 GTCTATCGTTTTGAGTGGATTCCTC 59.479 44.000 3.95 0.00 0.00 3.71
316 326 3.000819 TGGATTCCTCCCACGCGT 61.001 61.111 5.58 5.58 41.29 6.01
319 329 2.046314 ATTCCTCCCACGCGTTGG 60.046 61.111 22.71 22.71 46.47 3.77
338 348 4.062677 TGGCACAAGTTAGTTACGTTCT 57.937 40.909 0.00 0.00 31.92 3.01
339 349 4.444536 TGGCACAAGTTAGTTACGTTCTT 58.555 39.130 0.00 0.00 31.92 2.52
340 350 5.599732 TGGCACAAGTTAGTTACGTTCTTA 58.400 37.500 0.00 0.00 31.92 2.10
341 351 6.225318 TGGCACAAGTTAGTTACGTTCTTAT 58.775 36.000 0.00 0.00 31.92 1.73
342 352 7.377398 TGGCACAAGTTAGTTACGTTCTTATA 58.623 34.615 0.00 0.00 31.92 0.98
343 353 8.036575 TGGCACAAGTTAGTTACGTTCTTATAT 58.963 33.333 0.00 0.00 31.92 0.86
344 354 8.876790 GGCACAAGTTAGTTACGTTCTTATATT 58.123 33.333 0.00 0.00 0.00 1.28
352 362 9.897744 TTAGTTACGTTCTTATATTATGGGACG 57.102 33.333 0.00 9.33 0.00 4.79
353 363 7.373493 AGTTACGTTCTTATATTATGGGACGG 58.627 38.462 0.00 1.76 0.00 4.79
354 364 7.231317 AGTTACGTTCTTATATTATGGGACGGA 59.769 37.037 0.00 5.63 0.00 4.69
355 365 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
356 366 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
357 367 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
358 368 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
359 369 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
371 381 3.890147 GACGGAGGGAGTACTTCACATAT 59.110 47.826 2.92 0.00 0.00 1.78
372 382 5.057843 ACGGAGGGAGTACTTCACATATA 57.942 43.478 2.92 0.00 0.00 0.86
373 383 4.826183 ACGGAGGGAGTACTTCACATATAC 59.174 45.833 2.92 0.00 0.00 1.47
374 384 5.071370 CGGAGGGAGTACTTCACATATACT 58.929 45.833 2.92 0.00 31.79 2.12
375 385 5.181622 CGGAGGGAGTACTTCACATATACTC 59.818 48.000 2.92 0.00 42.69 2.59
380 390 6.578163 GAGTACTTCACATATACTCCCTCC 57.422 45.833 0.00 0.00 39.18 4.30
381 391 5.071370 AGTACTTCACATATACTCCCTCCG 58.929 45.833 0.00 0.00 0.00 4.63
382 392 3.912248 ACTTCACATATACTCCCTCCGT 58.088 45.455 0.00 0.00 0.00 4.69
383 393 4.287552 ACTTCACATATACTCCCTCCGTT 58.712 43.478 0.00 0.00 0.00 4.44
384 394 4.341520 ACTTCACATATACTCCCTCCGTTC 59.658 45.833 0.00 0.00 0.00 3.95
385 395 3.228453 TCACATATACTCCCTCCGTTCC 58.772 50.000 0.00 0.00 0.00 3.62
386 396 3.117246 TCACATATACTCCCTCCGTTCCT 60.117 47.826 0.00 0.00 0.00 3.36
387 397 4.105217 TCACATATACTCCCTCCGTTCCTA 59.895 45.833 0.00 0.00 0.00 2.94
388 398 4.831155 CACATATACTCCCTCCGTTCCTAA 59.169 45.833 0.00 0.00 0.00 2.69
389 399 5.303589 CACATATACTCCCTCCGTTCCTAAA 59.696 44.000 0.00 0.00 0.00 1.85
390 400 6.014499 CACATATACTCCCTCCGTTCCTAAAT 60.014 42.308 0.00 0.00 0.00 1.40
391 401 4.957684 ATACTCCCTCCGTTCCTAAATG 57.042 45.455 0.00 0.00 0.00 2.32
392 402 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
393 403 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
394 404 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
395 405 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
396 406 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
397 407 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
398 408 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
399 409 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
400 410 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
401 411 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
402 412 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
403 413 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
404 414 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
405 415 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
406 416 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
407 417 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
413 423 8.779354 AATGTAAGTCTTTGTAGAGATTCCAC 57.221 34.615 0.00 0.00 0.00 4.02
414 424 7.540474 TGTAAGTCTTTGTAGAGATTCCACT 57.460 36.000 0.00 0.00 0.00 4.00
415 425 8.645814 TGTAAGTCTTTGTAGAGATTCCACTA 57.354 34.615 0.00 0.00 0.00 2.74
416 426 9.085645 TGTAAGTCTTTGTAGAGATTCCACTAA 57.914 33.333 0.00 0.00 0.00 2.24
417 427 9.924650 GTAAGTCTTTGTAGAGATTCCACTAAA 57.075 33.333 0.00 0.00 0.00 1.85
419 429 9.442047 AAGTCTTTGTAGAGATTCCACTAAATG 57.558 33.333 0.00 0.00 0.00 2.32
434 444 4.982916 CACTAAATGGACTACATACGGAGC 59.017 45.833 0.00 0.00 39.40 4.70
435 445 4.647853 ACTAAATGGACTACATACGGAGCA 59.352 41.667 0.00 0.00 39.40 4.26
436 446 4.481368 AAATGGACTACATACGGAGCAA 57.519 40.909 0.00 0.00 39.40 3.91
437 447 4.481368 AATGGACTACATACGGAGCAAA 57.519 40.909 0.00 0.00 39.40 3.68
438 448 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
439 449 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
440 450 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
441 451 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
442 452 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
443 453 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
444 454 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
445 455 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
446 456 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
447 457 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
448 458 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
449 459 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
450 460 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
451 461 6.757897 ACGGAGCAAAATGAATGAATCTAA 57.242 33.333 0.00 0.00 0.00 2.10
452 462 7.156876 ACGGAGCAAAATGAATGAATCTAAA 57.843 32.000 0.00 0.00 0.00 1.85
453 463 7.029563 ACGGAGCAAAATGAATGAATCTAAAC 58.970 34.615 0.00 0.00 0.00 2.01
454 464 7.094205 ACGGAGCAAAATGAATGAATCTAAACT 60.094 33.333 0.00 0.00 0.00 2.66
455 465 7.756722 CGGAGCAAAATGAATGAATCTAAACTT 59.243 33.333 0.00 0.00 0.00 2.66
478 488 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
483 493 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
484 494 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
485 495 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
486 496 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
487 497 7.764443 GCATCTATATACATCCGTATGTGGTTT 59.236 37.037 3.56 0.00 45.99 3.27
494 504 8.786826 ATACATCCGTATGTGGTTTATAATGG 57.213 34.615 3.56 0.00 45.99 3.16
495 505 6.833041 ACATCCGTATGTGGTTTATAATGGA 58.167 36.000 0.00 0.00 44.79 3.41
496 506 7.284074 ACATCCGTATGTGGTTTATAATGGAA 58.716 34.615 0.00 0.00 44.79 3.53
497 507 7.942341 ACATCCGTATGTGGTTTATAATGGAAT 59.058 33.333 0.00 0.00 44.79 3.01
498 508 7.972832 TCCGTATGTGGTTTATAATGGAATC 57.027 36.000 0.00 0.00 0.00 2.52
499 509 7.741785 TCCGTATGTGGTTTATAATGGAATCT 58.258 34.615 0.00 0.00 0.00 2.40
500 510 7.876068 TCCGTATGTGGTTTATAATGGAATCTC 59.124 37.037 0.00 0.00 0.00 2.75
501 511 7.878127 CCGTATGTGGTTTATAATGGAATCTCT 59.122 37.037 0.00 0.00 0.00 3.10
502 512 9.923143 CGTATGTGGTTTATAATGGAATCTCTA 57.077 33.333 0.00 0.00 0.00 2.43
506 516 9.967451 TGTGGTTTATAATGGAATCTCTACAAA 57.033 29.630 0.00 0.00 0.00 2.83
516 526 9.965902 AATGGAATCTCTACAAAGACTTACATT 57.034 29.630 0.00 0.00 30.67 2.71
517 527 9.965902 ATGGAATCTCTACAAAGACTTACATTT 57.034 29.630 0.00 0.00 0.00 2.32
523 533 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
524 534 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
525 535 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
526 536 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
527 537 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
528 538 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
529 539 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
530 540 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
531 541 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
551 561 9.570488 GAGGGAGTATAATAAAGTATTACTGCG 57.430 37.037 0.00 0.00 33.80 5.18
559 569 1.947642 GTATTACTGCGCGACGGGG 60.948 63.158 12.10 0.27 0.00 5.73
562 572 1.947597 ATTACTGCGCGACGGGGTTA 61.948 55.000 12.10 0.00 0.00 2.85
574 584 4.440663 GCGACGGGGTTAGATAACTAAAGT 60.441 45.833 0.00 0.00 39.81 2.66
601 611 6.159751 TGACTAAGTTATAAATCCCTGGCCTT 59.840 38.462 3.32 0.00 0.00 4.35
603 613 4.455070 AGTTATAAATCCCTGGCCTTCC 57.545 45.455 3.32 0.00 0.00 3.46
608 618 0.919710 AATCCCTGGCCTTCCTACAC 59.080 55.000 3.32 0.00 0.00 2.90
685 695 3.259064 CAAGAATGCAAATGAAGCAGGG 58.741 45.455 0.00 0.00 46.36 4.45
713 724 1.485397 CGCTCAGAGACAATCCGATG 58.515 55.000 0.00 0.00 0.00 3.84
724 735 7.440556 CAGAGACAATCCGATGTATTTCTTGAT 59.559 37.037 0.00 0.00 32.57 2.57
754 765 9.934190 CATCCCAGAATAAACTTTTTGTTTTTG 57.066 29.630 0.00 0.00 45.69 2.44
853 931 3.208436 TGGAAACAACAAAGCCGAAGGT 61.208 45.455 0.00 0.00 46.46 3.50
987 1065 2.202892 GAACCCGCATCGAGGTCC 60.203 66.667 0.00 0.00 34.45 4.46
1339 1622 2.096013 GGTGCTCCGTGCTAAGAAATTC 59.904 50.000 0.00 0.00 43.37 2.17
1342 1625 2.223135 GCTCCGTGCTAAGAAATTCTGC 60.223 50.000 0.00 0.00 38.95 4.26
1445 1732 2.264109 CGAGCTTAACTTCTCGCTGA 57.736 50.000 0.00 0.00 44.30 4.26
1495 1782 1.588082 GTGGCATGGGCTTTCTGTG 59.412 57.895 0.00 0.00 40.87 3.66
1502 1789 2.991540 GGCTTTCTGTGGTGGGGC 60.992 66.667 0.00 0.00 0.00 5.80
1575 1862 5.504853 TGTGCACTCATGGTATAAATTGGA 58.495 37.500 19.41 0.00 0.00 3.53
1658 1945 3.689649 GTCTGGTTTCAGTGTTCTGTTGT 59.310 43.478 0.00 0.00 41.91 3.32
2146 2436 0.245539 ATGTTGCTTCACATGCTGCC 59.754 50.000 0.00 0.00 35.97 4.85
2303 2593 6.181206 AGGTTGCTTCTTCTCTCTTAAACT 57.819 37.500 0.00 0.00 0.00 2.66
2387 2677 9.203421 ACCTTTCAGTTTAGAACAAAAGTTTTG 57.797 29.630 23.65 23.65 35.97 2.44
2465 2755 6.064060 TGTTGGTCATTTCAATCTCAGTCTT 58.936 36.000 0.00 0.00 0.00 3.01
2582 2872 6.935208 ACAGACCAAGTTAGGAAACACTTATC 59.065 38.462 0.00 0.00 38.12 1.75
2592 2882 5.109903 AGGAAACACTTATCGTGACTATGC 58.890 41.667 0.00 0.00 46.81 3.14
2797 3087 6.939163 AGTGATGATTTTCTTGTAAGTCTGCT 59.061 34.615 0.00 0.00 0.00 4.24
2801 3091 9.122613 GATGATTTTCTTGTAAGTCTGCTTTTC 57.877 33.333 0.00 0.00 36.22 2.29
2838 3128 5.304101 TGGTGGTGCTGAATAAGACATTTTT 59.696 36.000 0.00 0.00 0.00 1.94
2885 3175 3.558505 CTTGCATTATTCGTGCCTATGC 58.441 45.455 0.00 0.00 41.83 3.14
2897 3187 3.744238 TGCCTATGCGCAGTTAAGATA 57.256 42.857 18.32 0.00 41.78 1.98
3204 3495 0.911769 CCTGCTGAAGGTATGTCCCA 59.088 55.000 0.00 0.00 41.74 4.37
3212 3503 3.587061 TGAAGGTATGTCCCATGTCAGTT 59.413 43.478 0.00 0.00 36.75 3.16
3225 3516 6.322456 TCCCATGTCAGTTAAATTTTGTCACA 59.678 34.615 0.00 0.00 0.00 3.58
3486 3777 4.630644 AGAGGAGCTTTGATTTGACTGA 57.369 40.909 0.00 0.00 0.00 3.41
3681 3975 2.233271 CAGATATGGCCATGTGGGTTC 58.767 52.381 29.04 14.00 39.65 3.62
3682 3976 1.852309 AGATATGGCCATGTGGGTTCA 59.148 47.619 29.04 5.67 39.65 3.18
3689 3983 2.424812 GGCCATGTGGGTTCATTCCTAT 60.425 50.000 0.00 0.00 39.65 2.57
3727 4021 7.667557 TCTACCTGATGTTACTTATGCCATAC 58.332 38.462 0.00 0.00 0.00 2.39
3889 4186 0.396060 CCTGGAGAGGGAATAGCTGC 59.604 60.000 0.00 0.00 35.40 5.25
4048 4345 3.755378 GGAGTCAGCAGATTGAACATGTT 59.245 43.478 11.78 11.78 0.00 2.71
4064 4361 8.365060 TGAACATGTTTTATCCCAATCAATCT 57.635 30.769 13.36 0.00 0.00 2.40
4066 4363 7.031226 ACATGTTTTATCCCAATCAATCTCG 57.969 36.000 0.00 0.00 0.00 4.04
4100 4397 4.566907 GGGAGCTGGGTTACAAAACAGATA 60.567 45.833 0.00 0.00 37.34 1.98
4101 4398 5.007682 GGAGCTGGGTTACAAAACAGATAA 58.992 41.667 0.00 0.00 37.34 1.75
4121 4418 8.562892 CAGATAATACAACAGGAATTGATGTCC 58.437 37.037 0.00 0.00 41.33 4.02
4190 4487 6.537355 TCATTTATCCTCTTCATGATGACCC 58.463 40.000 7.19 0.00 0.00 4.46
4380 4677 4.521146 CCTCAGCTGAACCAGATAAATGT 58.479 43.478 18.85 0.00 32.44 2.71
4661 4982 1.479323 CAATGGATGGGTTGCTGAAGG 59.521 52.381 0.00 0.00 0.00 3.46
4662 4983 1.002069 ATGGATGGGTTGCTGAAGGA 58.998 50.000 0.00 0.00 0.00 3.36
4663 4984 0.776810 TGGATGGGTTGCTGAAGGAA 59.223 50.000 0.00 0.00 0.00 3.36
4664 4985 1.177401 GGATGGGTTGCTGAAGGAAC 58.823 55.000 6.18 6.18 44.24 3.62
4665 4986 1.547675 GGATGGGTTGCTGAAGGAACA 60.548 52.381 15.35 0.00 46.34 3.18
4666 4987 1.815003 GATGGGTTGCTGAAGGAACAG 59.185 52.381 15.35 0.00 46.34 3.16
4667 4988 0.843309 TGGGTTGCTGAAGGAACAGA 59.157 50.000 15.35 0.00 46.34 3.41
4668 4989 1.239347 GGGTTGCTGAAGGAACAGAC 58.761 55.000 15.35 3.08 46.34 3.51
4669 4990 1.476833 GGGTTGCTGAAGGAACAGACA 60.477 52.381 15.35 0.00 46.34 3.41
4670 4991 1.876156 GGTTGCTGAAGGAACAGACAG 59.124 52.381 15.35 0.00 46.34 3.51
4671 4992 2.485479 GGTTGCTGAAGGAACAGACAGA 60.485 50.000 15.35 0.00 46.34 3.41
4672 4993 3.206150 GTTGCTGAAGGAACAGACAGAA 58.794 45.455 9.53 0.00 44.35 3.02
4673 4994 3.558931 TGCTGAAGGAACAGACAGAAA 57.441 42.857 0.00 0.00 39.94 2.52
4674 4995 3.206150 TGCTGAAGGAACAGACAGAAAC 58.794 45.455 0.00 0.00 39.94 2.78
4675 4996 3.206150 GCTGAAGGAACAGACAGAAACA 58.794 45.455 0.00 0.00 39.94 2.83
4676 4997 3.627577 GCTGAAGGAACAGACAGAAACAA 59.372 43.478 0.00 0.00 39.94 2.83
4677 4998 4.276926 GCTGAAGGAACAGACAGAAACAAT 59.723 41.667 0.00 0.00 39.94 2.71
4678 4999 5.755813 CTGAAGGAACAGACAGAAACAATG 58.244 41.667 0.00 0.00 39.94 2.82
4679 5000 4.036734 TGAAGGAACAGACAGAAACAATGC 59.963 41.667 0.00 0.00 0.00 3.56
4680 5001 3.825328 AGGAACAGACAGAAACAATGCT 58.175 40.909 0.00 0.00 0.00 3.79
4681 5002 3.567164 AGGAACAGACAGAAACAATGCTG 59.433 43.478 0.00 0.00 38.10 4.41
4682 5003 3.565482 GGAACAGACAGAAACAATGCTGA 59.435 43.478 0.00 0.00 36.07 4.26
4683 5004 4.036734 GGAACAGACAGAAACAATGCTGAA 59.963 41.667 0.00 0.00 36.07 3.02
4684 5005 4.825546 ACAGACAGAAACAATGCTGAAG 57.174 40.909 0.00 0.00 36.07 3.02
4815 5136 6.925165 TCTCAATGCCTGAAAATTTCAAGAAC 59.075 34.615 9.85 0.81 39.58 3.01
4817 5138 3.976169 TGCCTGAAAATTTCAAGAACGG 58.024 40.909 9.85 8.03 39.58 4.44
4821 5142 3.567397 TGAAAATTTCAAGAACGGGGGA 58.433 40.909 5.87 0.00 36.59 4.81
5007 5328 2.093658 AGGAACTGTAATTGACCGCGAT 60.094 45.455 8.23 0.00 37.18 4.58
5157 5478 5.011431 TGAGCTGGATATAGATGTCAACAGG 59.989 44.000 0.00 0.00 0.00 4.00
5491 5812 3.603532 CTCAATGCAGAAACAGCTCCTA 58.396 45.455 0.00 0.00 0.00 2.94
5805 6126 3.587797 ACTAAAGCTGATTCGGTCGAA 57.412 42.857 8.27 8.27 38.59 3.71
6037 6360 7.901029 TGCCTGATTTTGTTGAACCATATTAA 58.099 30.769 0.00 0.00 0.00 1.40
6245 6569 9.817365 CTATACTCGGATGCTGATTAATTTTTG 57.183 33.333 0.00 0.00 0.00 2.44
6683 7099 0.894141 AAACAACAAGCTGGTGCACA 59.106 45.000 20.43 3.92 39.04 4.57
6741 7171 2.559668 ACCACATGTTTTGCAGGATGAG 59.440 45.455 0.00 0.00 39.69 2.90
6882 7312 6.416415 ACTGATGCAAATCTGAAGAGATCTT 58.584 36.000 0.00 0.00 38.03 2.40
6959 7389 1.916697 GCAAGCAGGCGGAAGAAGAC 61.917 60.000 0.00 0.00 0.00 3.01
7177 7613 6.183361 TGTCTGTTGTCATTTACTCCACCTTA 60.183 38.462 0.00 0.00 0.00 2.69
7189 7625 4.828829 ACTCCACCTTAATTTGGTACTCG 58.171 43.478 3.01 0.00 35.80 4.18
7272 7710 3.071602 GCTTCAGCACCCTTGATATCCTA 59.928 47.826 0.00 0.00 41.59 2.94
7296 7734 3.067106 AGTTGTCGCTGATTTGGTACTG 58.933 45.455 0.00 0.00 0.00 2.74
7354 10522 7.275123 GGAGTATTTTCTGTACTTGGTAGAACG 59.725 40.741 0.00 0.00 32.77 3.95
7356 10524 8.146412 AGTATTTTCTGTACTTGGTAGAACGTT 58.854 33.333 0.00 0.00 30.76 3.99
7367 10535 7.163441 ACTTGGTAGAACGTTTTATACACCAT 58.837 34.615 10.88 0.00 34.93 3.55
7368 10536 8.313292 ACTTGGTAGAACGTTTTATACACCATA 58.687 33.333 10.88 3.84 34.93 2.74
7369 10537 8.477984 TTGGTAGAACGTTTTATACACCATAC 57.522 34.615 10.88 0.00 34.93 2.39
7370 10538 7.839907 TGGTAGAACGTTTTATACACCATACT 58.160 34.615 0.46 0.00 32.00 2.12
7371 10539 8.965819 TGGTAGAACGTTTTATACACCATACTA 58.034 33.333 0.46 0.00 32.00 1.82
7372 10540 9.455847 GGTAGAACGTTTTATACACCATACTAG 57.544 37.037 0.46 0.00 32.00 2.57
7395 10563 7.487822 AGTACATGATATGAGAAGGGTATGG 57.512 40.000 0.00 0.00 0.00 2.74
7398 10566 7.579940 ACATGATATGAGAAGGGTATGGATT 57.420 36.000 0.00 0.00 0.00 3.01
7509 11721 7.369803 TCATTTTCTGAATGAGACTAAGCAC 57.630 36.000 0.00 0.00 33.20 4.40
7545 11757 3.865684 GCCCTTGGTTCATGTTTCCAATG 60.866 47.826 15.13 13.08 39.91 2.82
7571 11783 3.564511 CCGAAACTGCAAACGATTCATT 58.435 40.909 0.00 0.00 0.00 2.57
7605 11817 8.436200 CGATAGAAAATATTCCCGAAATCACTC 58.564 37.037 0.00 0.00 36.12 3.51
7606 11818 9.273016 GATAGAAAATATTCCCGAAATCACTCA 57.727 33.333 0.00 0.00 36.12 3.41
7607 11819 9.799106 ATAGAAAATATTCCCGAAATCACTCAT 57.201 29.630 0.00 0.00 36.12 2.90
7608 11820 8.525290 AGAAAATATTCCCGAAATCACTCATT 57.475 30.769 0.00 0.00 36.12 2.57
7609 11821 8.971073 AGAAAATATTCCCGAAATCACTCATTT 58.029 29.630 0.00 0.00 35.35 2.32
7610 11822 9.237846 GAAAATATTCCCGAAATCACTCATTTC 57.762 33.333 0.00 0.00 45.01 2.17
7639 11851 9.884465 GATAGAAAATATTTCCGAAATCACTGG 57.116 33.333 9.67 0.00 32.38 4.00
7640 11852 7.703058 AGAAAATATTTCCGAAATCACTGGT 57.297 32.000 9.67 0.00 32.38 4.00
7641 11853 7.538575 AGAAAATATTTCCGAAATCACTGGTG 58.461 34.615 9.67 0.00 32.38 4.17
7642 11854 6.834168 AAATATTTCCGAAATCACTGGTGT 57.166 33.333 9.67 0.00 32.38 4.16
7643 11855 6.834168 AATATTTCCGAAATCACTGGTGTT 57.166 33.333 9.67 0.00 32.38 3.32
7644 11856 3.980646 TTTCCGAAATCACTGGTGTTG 57.019 42.857 0.53 0.00 0.00 3.33
7645 11857 2.631160 TCCGAAATCACTGGTGTTGT 57.369 45.000 0.53 0.00 0.00 3.32
7646 11858 2.489971 TCCGAAATCACTGGTGTTGTC 58.510 47.619 0.53 0.00 0.00 3.18
7647 11859 2.158885 TCCGAAATCACTGGTGTTGTCA 60.159 45.455 0.53 0.00 0.00 3.58
7648 11860 2.616376 CCGAAATCACTGGTGTTGTCAA 59.384 45.455 0.53 0.00 0.00 3.18
7649 11861 3.303990 CCGAAATCACTGGTGTTGTCAAG 60.304 47.826 0.53 0.00 0.00 3.02
7650 11862 3.303990 CGAAATCACTGGTGTTGTCAAGG 60.304 47.826 0.53 0.00 0.00 3.61
7651 11863 2.276732 ATCACTGGTGTTGTCAAGGG 57.723 50.000 0.53 0.00 0.00 3.95
7652 11864 0.916086 TCACTGGTGTTGTCAAGGGT 59.084 50.000 0.53 0.00 0.00 4.34
7653 11865 2.120312 TCACTGGTGTTGTCAAGGGTA 58.880 47.619 0.53 0.00 0.00 3.69
7654 11866 2.158871 TCACTGGTGTTGTCAAGGGTAC 60.159 50.000 0.53 0.00 0.00 3.34
7672 11884 4.668289 GGTACCCTTTGCAACAATTATCG 58.332 43.478 0.00 0.00 0.00 2.92
7673 11885 4.157105 GGTACCCTTTGCAACAATTATCGT 59.843 41.667 0.00 0.00 0.00 3.73
7674 11886 4.173036 ACCCTTTGCAACAATTATCGTG 57.827 40.909 0.00 0.00 0.00 4.35
7675 11887 3.823873 ACCCTTTGCAACAATTATCGTGA 59.176 39.130 0.00 0.00 0.00 4.35
7676 11888 4.279671 ACCCTTTGCAACAATTATCGTGAA 59.720 37.500 0.00 0.00 0.00 3.18
7677 11889 5.221342 ACCCTTTGCAACAATTATCGTGAAA 60.221 36.000 0.00 0.00 0.00 2.69
7678 11890 5.118510 CCCTTTGCAACAATTATCGTGAAAC 59.881 40.000 0.00 0.00 0.00 2.78
7679 11891 5.920273 CCTTTGCAACAATTATCGTGAAACT 59.080 36.000 0.00 0.00 31.75 2.66
7680 11892 6.088085 CCTTTGCAACAATTATCGTGAAACTC 59.912 38.462 0.00 0.00 31.75 3.01
7681 11893 5.940192 TGCAACAATTATCGTGAAACTCT 57.060 34.783 0.00 0.00 31.75 3.24
7682 11894 5.688823 TGCAACAATTATCGTGAAACTCTG 58.311 37.500 0.00 0.00 31.75 3.35
7683 11895 4.554973 GCAACAATTATCGTGAAACTCTGC 59.445 41.667 0.00 0.00 31.75 4.26
7684 11896 5.617751 GCAACAATTATCGTGAAACTCTGCT 60.618 40.000 0.00 0.00 31.75 4.24
7685 11897 5.536554 ACAATTATCGTGAAACTCTGCTG 57.463 39.130 0.00 0.00 31.75 4.41
7686 11898 4.142816 ACAATTATCGTGAAACTCTGCTGC 60.143 41.667 0.00 0.00 31.75 5.25
7687 11899 3.319137 TTATCGTGAAACTCTGCTGCT 57.681 42.857 0.00 0.00 31.75 4.24
7688 11900 4.450082 TTATCGTGAAACTCTGCTGCTA 57.550 40.909 0.00 0.00 31.75 3.49
7689 11901 2.812358 TCGTGAAACTCTGCTGCTAA 57.188 45.000 0.00 0.00 31.75 3.09
7690 11902 2.677199 TCGTGAAACTCTGCTGCTAAG 58.323 47.619 0.00 0.55 31.75 2.18
7691 11903 1.728971 CGTGAAACTCTGCTGCTAAGG 59.271 52.381 0.00 0.00 31.75 2.69
7692 11904 2.772287 GTGAAACTCTGCTGCTAAGGT 58.228 47.619 0.00 0.00 0.00 3.50
7693 11905 2.481952 GTGAAACTCTGCTGCTAAGGTG 59.518 50.000 0.00 0.00 0.00 4.00
7694 11906 2.104792 TGAAACTCTGCTGCTAAGGTGT 59.895 45.455 0.00 0.00 0.00 4.16
7695 11907 3.323691 TGAAACTCTGCTGCTAAGGTGTA 59.676 43.478 0.00 0.00 0.00 2.90
7696 11908 4.020218 TGAAACTCTGCTGCTAAGGTGTAT 60.020 41.667 0.00 0.00 0.00 2.29
7697 11909 3.810310 ACTCTGCTGCTAAGGTGTATC 57.190 47.619 0.00 0.00 0.00 2.24
7698 11910 3.370104 ACTCTGCTGCTAAGGTGTATCT 58.630 45.455 0.00 0.00 0.00 1.98
7699 11911 3.383185 ACTCTGCTGCTAAGGTGTATCTC 59.617 47.826 0.00 0.00 0.00 2.75
7700 11912 3.636300 CTCTGCTGCTAAGGTGTATCTCT 59.364 47.826 0.00 0.00 0.00 3.10
7701 11913 3.382865 TCTGCTGCTAAGGTGTATCTCTG 59.617 47.826 0.00 0.00 0.00 3.35
7702 11914 3.365472 TGCTGCTAAGGTGTATCTCTGA 58.635 45.455 0.00 0.00 0.00 3.27
7703 11915 3.131223 TGCTGCTAAGGTGTATCTCTGAC 59.869 47.826 0.00 0.00 0.00 3.51
7704 11916 3.793801 GCTGCTAAGGTGTATCTCTGACG 60.794 52.174 0.00 0.00 0.00 4.35
7705 11917 2.688446 TGCTAAGGTGTATCTCTGACGG 59.312 50.000 0.00 0.00 0.00 4.79
7706 11918 2.950309 GCTAAGGTGTATCTCTGACGGA 59.050 50.000 0.00 0.00 0.00 4.69
7707 11919 3.570550 GCTAAGGTGTATCTCTGACGGAT 59.429 47.826 0.00 0.00 0.00 4.18
7708 11920 4.320641 GCTAAGGTGTATCTCTGACGGATC 60.321 50.000 0.00 0.00 0.00 3.36
7709 11921 3.586470 AGGTGTATCTCTGACGGATCT 57.414 47.619 0.00 0.00 0.00 2.75
7710 11922 3.482436 AGGTGTATCTCTGACGGATCTC 58.518 50.000 0.00 0.00 0.00 2.75
7711 11923 2.224549 GGTGTATCTCTGACGGATCTCG 59.775 54.545 0.00 0.00 45.88 4.04
7712 11924 1.874231 TGTATCTCTGACGGATCTCGC 59.126 52.381 3.85 0.00 43.89 5.03
7713 11925 1.136197 GTATCTCTGACGGATCTCGCG 60.136 57.143 0.00 0.00 43.89 5.87
7714 11926 1.511318 ATCTCTGACGGATCTCGCGG 61.511 60.000 6.13 0.00 43.89 6.46
7715 11927 2.124860 TCTGACGGATCTCGCGGA 60.125 61.111 6.13 2.40 43.89 5.54
7716 11928 1.715862 CTCTGACGGATCTCGCGGAA 61.716 60.000 6.13 0.00 43.89 4.30
7717 11929 1.101635 TCTGACGGATCTCGCGGAAT 61.102 55.000 6.13 0.00 43.89 3.01
7718 11930 0.249073 CTGACGGATCTCGCGGAATT 60.249 55.000 6.13 0.00 43.89 2.17
7719 11931 0.174845 TGACGGATCTCGCGGAATTT 59.825 50.000 6.13 0.00 43.89 1.82
7720 11932 0.577269 GACGGATCTCGCGGAATTTG 59.423 55.000 6.13 0.00 43.89 2.32
7721 11933 0.174845 ACGGATCTCGCGGAATTTGA 59.825 50.000 6.13 0.00 43.89 2.69
7722 11934 1.202533 ACGGATCTCGCGGAATTTGAT 60.203 47.619 6.13 0.82 43.89 2.57
7723 11935 1.867233 CGGATCTCGCGGAATTTGATT 59.133 47.619 6.13 0.00 0.00 2.57
7724 11936 3.057019 CGGATCTCGCGGAATTTGATTA 58.943 45.455 6.13 0.00 0.00 1.75
7725 11937 3.121944 CGGATCTCGCGGAATTTGATTAG 59.878 47.826 6.13 0.00 0.00 1.73
7726 11938 4.058817 GGATCTCGCGGAATTTGATTAGT 58.941 43.478 6.13 0.00 0.00 2.24
7727 11939 4.084328 GGATCTCGCGGAATTTGATTAGTG 60.084 45.833 6.13 0.00 0.00 2.74
7728 11940 2.607635 TCTCGCGGAATTTGATTAGTGC 59.392 45.455 6.13 0.00 0.00 4.40
7729 11941 2.609459 CTCGCGGAATTTGATTAGTGCT 59.391 45.455 6.13 0.00 0.00 4.40
7730 11942 2.351418 TCGCGGAATTTGATTAGTGCTG 59.649 45.455 6.13 0.00 0.00 4.41
7731 11943 2.539547 CGCGGAATTTGATTAGTGCTGG 60.540 50.000 0.00 0.00 0.00 4.85
7732 11944 2.423538 GCGGAATTTGATTAGTGCTGGT 59.576 45.455 0.00 0.00 0.00 4.00
7733 11945 3.487544 GCGGAATTTGATTAGTGCTGGTC 60.488 47.826 0.00 0.00 0.00 4.02
7734 11946 3.941483 CGGAATTTGATTAGTGCTGGTCT 59.059 43.478 0.00 0.00 0.00 3.85
7735 11947 4.396166 CGGAATTTGATTAGTGCTGGTCTT 59.604 41.667 0.00 0.00 0.00 3.01
7736 11948 5.106157 CGGAATTTGATTAGTGCTGGTCTTT 60.106 40.000 0.00 0.00 0.00 2.52
7737 11949 6.095377 GGAATTTGATTAGTGCTGGTCTTTG 58.905 40.000 0.00 0.00 0.00 2.77
7738 11950 6.071952 GGAATTTGATTAGTGCTGGTCTTTGA 60.072 38.462 0.00 0.00 0.00 2.69
7739 11951 7.363268 GGAATTTGATTAGTGCTGGTCTTTGAT 60.363 37.037 0.00 0.00 0.00 2.57
7740 11952 5.885230 TTGATTAGTGCTGGTCTTTGATG 57.115 39.130 0.00 0.00 0.00 3.07
7741 11953 3.691118 TGATTAGTGCTGGTCTTTGATGC 59.309 43.478 0.00 0.00 0.00 3.91
7742 11954 2.857186 TAGTGCTGGTCTTTGATGCA 57.143 45.000 0.00 0.00 0.00 3.96
7743 11955 2.211250 AGTGCTGGTCTTTGATGCAT 57.789 45.000 0.00 0.00 36.04 3.96
7744 11956 2.089980 AGTGCTGGTCTTTGATGCATC 58.910 47.619 20.14 20.14 36.04 3.91
7745 11957 2.089980 GTGCTGGTCTTTGATGCATCT 58.910 47.619 26.32 0.00 36.04 2.90
7746 11958 3.054875 AGTGCTGGTCTTTGATGCATCTA 60.055 43.478 26.32 17.25 36.04 1.98
7747 11959 3.881688 GTGCTGGTCTTTGATGCATCTAT 59.118 43.478 26.32 0.00 36.04 1.98
7748 11960 4.337555 GTGCTGGTCTTTGATGCATCTATT 59.662 41.667 26.32 0.00 36.04 1.73
7749 11961 4.951715 TGCTGGTCTTTGATGCATCTATTT 59.048 37.500 26.32 0.00 0.00 1.40
7750 11962 5.163591 TGCTGGTCTTTGATGCATCTATTTG 60.164 40.000 26.32 12.58 0.00 2.32
7751 11963 5.066893 GCTGGTCTTTGATGCATCTATTTGA 59.933 40.000 26.32 14.41 0.00 2.69
7752 11964 6.405065 GCTGGTCTTTGATGCATCTATTTGAA 60.405 38.462 26.32 9.34 0.00 2.69
7753 11965 7.649533 TGGTCTTTGATGCATCTATTTGAAT 57.350 32.000 26.32 0.00 0.00 2.57
7754 11966 7.709947 TGGTCTTTGATGCATCTATTTGAATC 58.290 34.615 26.32 12.93 32.95 2.52
7755 11967 7.558807 TGGTCTTTGATGCATCTATTTGAATCT 59.441 33.333 26.32 0.00 33.43 2.40
7756 11968 8.074972 GGTCTTTGATGCATCTATTTGAATCTC 58.925 37.037 26.32 0.00 33.43 2.75
7757 11969 7.797587 GTCTTTGATGCATCTATTTGAATCTCG 59.202 37.037 26.32 2.71 33.43 4.04
7758 11970 7.496920 TCTTTGATGCATCTATTTGAATCTCGT 59.503 33.333 26.32 0.00 33.43 4.18
7759 11971 6.775939 TGATGCATCTATTTGAATCTCGTC 57.224 37.500 26.32 0.00 33.43 4.20
7760 11972 6.519382 TGATGCATCTATTTGAATCTCGTCT 58.481 36.000 26.32 0.00 33.43 4.18
7761 11973 6.988580 TGATGCATCTATTTGAATCTCGTCTT 59.011 34.615 26.32 0.00 33.43 3.01
7762 11974 7.496920 TGATGCATCTATTTGAATCTCGTCTTT 59.503 33.333 26.32 0.00 33.43 2.52
7763 11975 7.008440 TGCATCTATTTGAATCTCGTCTTTG 57.992 36.000 0.00 0.00 0.00 2.77
7764 11976 5.906285 GCATCTATTTGAATCTCGTCTTTGC 59.094 40.000 0.00 0.00 0.00 3.68
7765 11977 6.238320 GCATCTATTTGAATCTCGTCTTTGCT 60.238 38.462 0.00 0.00 0.00 3.91
7766 11978 6.893958 TCTATTTGAATCTCGTCTTTGCTC 57.106 37.500 0.00 0.00 0.00 4.26
7767 11979 6.398095 TCTATTTGAATCTCGTCTTTGCTCA 58.602 36.000 0.00 0.00 0.00 4.26
7768 11980 7.044181 TCTATTTGAATCTCGTCTTTGCTCAT 58.956 34.615 0.00 0.00 0.00 2.90
7769 11981 5.536554 TTTGAATCTCGTCTTTGCTCATC 57.463 39.130 0.00 0.00 0.00 2.92
7770 11982 4.462508 TGAATCTCGTCTTTGCTCATCT 57.537 40.909 0.00 0.00 0.00 2.90
7771 11983 4.825422 TGAATCTCGTCTTTGCTCATCTT 58.175 39.130 0.00 0.00 0.00 2.40
7772 11984 5.240891 TGAATCTCGTCTTTGCTCATCTTT 58.759 37.500 0.00 0.00 0.00 2.52
7773 11985 6.398095 TGAATCTCGTCTTTGCTCATCTTTA 58.602 36.000 0.00 0.00 0.00 1.85
7774 11986 7.044181 TGAATCTCGTCTTTGCTCATCTTTAT 58.956 34.615 0.00 0.00 0.00 1.40
7775 11987 7.550551 TGAATCTCGTCTTTGCTCATCTTTATT 59.449 33.333 0.00 0.00 0.00 1.40
7776 11988 6.893958 TCTCGTCTTTGCTCATCTTTATTC 57.106 37.500 0.00 0.00 0.00 1.75
7777 11989 6.398095 TCTCGTCTTTGCTCATCTTTATTCA 58.602 36.000 0.00 0.00 0.00 2.57
7778 11990 6.311445 TCTCGTCTTTGCTCATCTTTATTCAC 59.689 38.462 0.00 0.00 0.00 3.18
7779 11991 5.062183 TCGTCTTTGCTCATCTTTATTCACG 59.938 40.000 0.00 0.00 0.00 4.35
7780 11992 5.163953 CGTCTTTGCTCATCTTTATTCACGT 60.164 40.000 0.00 0.00 0.00 4.49
7781 11993 6.017933 GTCTTTGCTCATCTTTATTCACGTG 58.982 40.000 9.94 9.94 0.00 4.49
7782 11994 5.700832 TCTTTGCTCATCTTTATTCACGTGT 59.299 36.000 16.51 0.00 0.00 4.49
7783 11995 5.530519 TTGCTCATCTTTATTCACGTGTC 57.469 39.130 16.51 0.00 0.00 3.67
7784 11996 4.820897 TGCTCATCTTTATTCACGTGTCT 58.179 39.130 16.51 6.65 0.00 3.41
7785 11997 5.961272 TGCTCATCTTTATTCACGTGTCTA 58.039 37.500 16.51 5.62 0.00 2.59
7786 11998 6.573434 TGCTCATCTTTATTCACGTGTCTAT 58.427 36.000 16.51 10.19 0.00 1.98
7787 11999 7.712797 TGCTCATCTTTATTCACGTGTCTATA 58.287 34.615 16.51 9.22 0.00 1.31
7788 12000 7.862873 TGCTCATCTTTATTCACGTGTCTATAG 59.137 37.037 16.51 12.03 0.00 1.31
7789 12001 7.327275 GCTCATCTTTATTCACGTGTCTATAGG 59.673 40.741 16.51 8.81 0.00 2.57
7790 12002 8.234136 TCATCTTTATTCACGTGTCTATAGGT 57.766 34.615 16.51 6.51 0.00 3.08
7791 12003 8.692710 TCATCTTTATTCACGTGTCTATAGGTT 58.307 33.333 16.51 2.95 0.00 3.50
7792 12004 8.755941 CATCTTTATTCACGTGTCTATAGGTTG 58.244 37.037 16.51 9.83 0.00 3.77
7793 12005 7.262772 TCTTTATTCACGTGTCTATAGGTTGG 58.737 38.462 16.51 0.00 0.00 3.77
7794 12006 6.778834 TTATTCACGTGTCTATAGGTTGGA 57.221 37.500 16.51 0.00 0.00 3.53
7795 12007 5.871396 ATTCACGTGTCTATAGGTTGGAT 57.129 39.130 16.51 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 3.575256 AGTAACGGACACCACTATTGACA 59.425 43.478 0.00 0.00 0.00 3.58
93 94 7.272948 AGCTTCGATTAGTCAAACTTAGTAACG 59.727 37.037 0.00 0.00 0.00 3.18
94 95 8.463456 AGCTTCGATTAGTCAAACTTAGTAAC 57.537 34.615 0.00 0.00 0.00 2.50
101 102 6.268825 TCTGTAGCTTCGATTAGTCAAACT 57.731 37.500 0.00 0.00 0.00 2.66
137 138 6.424207 CGCTTCTTACCTTTTCACTTTCTACT 59.576 38.462 0.00 0.00 0.00 2.57
161 162 4.379174 CAACACTTGGGGTCTCCG 57.621 61.111 0.00 0.00 38.76 4.63
170 171 2.880890 CAAGAGAAGTCCCCAACACTTG 59.119 50.000 0.00 0.00 34.10 3.16
175 184 2.930826 TCACAAGAGAAGTCCCCAAC 57.069 50.000 0.00 0.00 0.00 3.77
195 204 4.580167 TCTTACATCAGTTGCAGCAAAACT 59.420 37.500 10.11 0.83 38.40 2.66
239 249 9.243105 GTAAAGAGATATGAGGAGAGCTATTCT 57.757 37.037 0.00 0.00 39.43 2.40
241 251 9.600432 AAGTAAAGAGATATGAGGAGAGCTATT 57.400 33.333 0.00 0.00 0.00 1.73
250 260 8.145122 GTCCCAGTTAAGTAAAGAGATATGAGG 58.855 40.741 0.00 0.00 0.00 3.86
283 293 7.653227 GAGGAATCCACTCAAAACGATAGACG 61.653 46.154 0.61 0.00 40.12 4.18
284 294 5.420409 AGGAATCCACTCAAAACGATAGAC 58.580 41.667 0.61 0.00 41.38 2.59
291 301 3.154827 TGGGAGGAATCCACTCAAAAC 57.845 47.619 0.61 0.00 36.70 2.43
316 326 4.444536 AGAACGTAACTAACTTGTGCCAA 58.555 39.130 0.00 0.00 0.00 4.52
326 336 9.897744 CGTCCCATAATATAAGAACGTAACTAA 57.102 33.333 0.00 0.00 0.00 2.24
328 338 7.231317 TCCGTCCCATAATATAAGAACGTAACT 59.769 37.037 0.00 0.00 0.00 2.24
329 339 7.370383 TCCGTCCCATAATATAAGAACGTAAC 58.630 38.462 0.00 0.00 0.00 2.50
330 340 7.309377 CCTCCGTCCCATAATATAAGAACGTAA 60.309 40.741 0.00 0.00 0.00 3.18
332 342 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
333 343 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
334 344 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
335 345 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
336 346 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
337 347 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
338 348 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
339 349 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
340 350 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
341 351 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
342 352 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
343 353 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
344 354 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
345 355 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
346 356 0.324091 GAAGTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
347 357 0.324091 TGAAGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
348 358 0.816373 GTGAAGTACTCCCTCCGTCC 59.184 60.000 0.00 0.00 0.00 4.79
349 359 1.542492 TGTGAAGTACTCCCTCCGTC 58.458 55.000 0.00 0.00 0.00 4.79
350 360 2.233305 ATGTGAAGTACTCCCTCCGT 57.767 50.000 0.00 0.00 0.00 4.69
351 361 5.071370 AGTATATGTGAAGTACTCCCTCCG 58.929 45.833 0.00 0.00 0.00 4.63
352 362 6.578163 GAGTATATGTGAAGTACTCCCTCC 57.422 45.833 0.00 0.00 38.77 4.30
357 367 5.181622 CGGAGGGAGTATATGTGAAGTACTC 59.818 48.000 0.00 3.76 42.14 2.59
358 368 5.071370 CGGAGGGAGTATATGTGAAGTACT 58.929 45.833 0.00 0.00 0.00 2.73
359 369 4.826183 ACGGAGGGAGTATATGTGAAGTAC 59.174 45.833 0.00 0.00 0.00 2.73
371 381 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
372 382 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
373 383 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
374 384 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
375 385 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
376 386 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
377 387 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
378 388 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
379 389 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
380 390 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
381 391 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
387 397 9.220767 GTGGAATCTCTACAAAGACTTACATTT 57.779 33.333 0.00 0.00 0.00 2.32
388 398 8.598041 AGTGGAATCTCTACAAAGACTTACATT 58.402 33.333 0.00 0.00 29.47 2.71
389 399 8.140112 AGTGGAATCTCTACAAAGACTTACAT 57.860 34.615 0.00 0.00 29.47 2.29
390 400 7.540474 AGTGGAATCTCTACAAAGACTTACA 57.460 36.000 0.00 0.00 29.47 2.41
391 401 9.924650 TTTAGTGGAATCTCTACAAAGACTTAC 57.075 33.333 0.00 0.00 29.47 2.34
393 403 9.442047 CATTTAGTGGAATCTCTACAAAGACTT 57.558 33.333 0.00 0.00 29.47 3.01
411 421 4.982916 GCTCCGTATGTAGTCCATTTAGTG 59.017 45.833 0.00 0.00 34.86 2.74
412 422 4.647853 TGCTCCGTATGTAGTCCATTTAGT 59.352 41.667 0.00 0.00 34.86 2.24
413 423 5.196341 TGCTCCGTATGTAGTCCATTTAG 57.804 43.478 0.00 0.00 34.86 1.85
414 424 5.601583 TTGCTCCGTATGTAGTCCATTTA 57.398 39.130 0.00 0.00 34.86 1.40
415 425 4.481368 TTGCTCCGTATGTAGTCCATTT 57.519 40.909 0.00 0.00 34.86 2.32
416 426 4.481368 TTTGCTCCGTATGTAGTCCATT 57.519 40.909 0.00 0.00 34.86 3.16
417 427 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
418 428 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
419 429 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
420 430 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
421 431 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
422 432 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
423 433 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
424 434 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
425 435 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
426 436 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
427 437 7.857734 TTAGATTCATTCATTTTGCTCCGTA 57.142 32.000 0.00 0.00 0.00 4.02
428 438 6.757897 TTAGATTCATTCATTTTGCTCCGT 57.242 33.333 0.00 0.00 0.00 4.69
429 439 7.253422 AGTTTAGATTCATTCATTTTGCTCCG 58.747 34.615 0.00 0.00 0.00 4.63
430 440 8.992835 AAGTTTAGATTCATTCATTTTGCTCC 57.007 30.769 0.00 0.00 0.00 4.70
452 462 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
456 466 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
457 467 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
458 468 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
459 469 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
460 470 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
461 471 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
468 478 9.878667 CCATTATAAACCACATACGGATGTATA 57.121 33.333 14.23 4.47 44.82 1.47
469 479 8.598916 TCCATTATAAACCACATACGGATGTAT 58.401 33.333 14.23 5.54 44.82 2.29
470 480 7.964624 TCCATTATAAACCACATACGGATGTA 58.035 34.615 14.23 0.00 44.82 2.29
472 482 7.737972 TTCCATTATAAACCACATACGGATG 57.262 36.000 5.94 5.94 39.16 3.51
473 483 8.383175 AGATTCCATTATAAACCACATACGGAT 58.617 33.333 0.00 0.00 0.00 4.18
474 484 7.741785 AGATTCCATTATAAACCACATACGGA 58.258 34.615 0.00 0.00 0.00 4.69
475 485 7.878127 AGAGATTCCATTATAAACCACATACGG 59.122 37.037 0.00 0.00 0.00 4.02
476 486 8.833231 AGAGATTCCATTATAAACCACATACG 57.167 34.615 0.00 0.00 0.00 3.06
480 490 9.967451 TTTGTAGAGATTCCATTATAAACCACA 57.033 29.630 0.00 0.00 0.00 4.17
490 500 9.965902 AATGTAAGTCTTTGTAGAGATTCCATT 57.034 29.630 0.00 0.00 0.00 3.16
491 501 9.965902 AAATGTAAGTCTTTGTAGAGATTCCAT 57.034 29.630 0.00 0.00 0.00 3.41
497 507 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
498 508 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
499 509 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
500 510 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
501 511 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
502 512 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
503 513 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
504 514 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
505 515 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
506 516 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
507 517 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
508 518 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
509 519 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
510 520 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
511 521 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
512 522 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
513 523 4.957684 ATACTCCCTCCGTTCCTAAATG 57.042 45.455 0.00 0.00 0.00 2.32
514 524 8.731591 TTATTATACTCCCTCCGTTCCTAAAT 57.268 34.615 0.00 0.00 0.00 1.40
515 525 8.551682 TTTATTATACTCCCTCCGTTCCTAAA 57.448 34.615 0.00 0.00 0.00 1.85
516 526 7.786464 ACTTTATTATACTCCCTCCGTTCCTAA 59.214 37.037 0.00 0.00 0.00 2.69
517 527 7.300658 ACTTTATTATACTCCCTCCGTTCCTA 58.699 38.462 0.00 0.00 0.00 2.94
518 528 6.141790 ACTTTATTATACTCCCTCCGTTCCT 58.858 40.000 0.00 0.00 0.00 3.36
519 529 6.416631 ACTTTATTATACTCCCTCCGTTCC 57.583 41.667 0.00 0.00 0.00 3.62
522 532 9.819754 AGTAATACTTTATTATACTCCCTCCGT 57.180 33.333 0.00 0.00 33.60 4.69
524 534 9.872721 GCAGTAATACTTTATTATACTCCCTCC 57.127 37.037 0.00 0.00 33.60 4.30
525 535 9.570488 CGCAGTAATACTTTATTATACTCCCTC 57.430 37.037 0.00 0.00 33.60 4.30
526 536 8.033626 GCGCAGTAATACTTTATTATACTCCCT 58.966 37.037 0.30 0.00 33.60 4.20
527 537 7.008992 CGCGCAGTAATACTTTATTATACTCCC 59.991 40.741 8.75 0.00 33.60 4.30
528 538 7.752239 TCGCGCAGTAATACTTTATTATACTCC 59.248 37.037 8.75 0.00 33.60 3.85
529 539 8.573801 GTCGCGCAGTAATACTTTATTATACTC 58.426 37.037 8.75 0.00 33.60 2.59
530 540 7.269937 CGTCGCGCAGTAATACTTTATTATACT 59.730 37.037 8.75 0.00 33.60 2.12
531 541 7.371267 CGTCGCGCAGTAATACTTTATTATAC 58.629 38.462 8.75 0.00 33.60 1.47
551 561 3.715628 TTAGTTATCTAACCCCGTCGC 57.284 47.619 0.00 0.00 36.88 5.19
574 584 7.516209 AGGCCAGGGATTTATAACTTAGTCATA 59.484 37.037 5.01 0.00 0.00 2.15
601 611 3.188159 ACAAAACAAGCTCGTGTAGGA 57.812 42.857 0.00 0.00 0.00 2.94
626 636 8.680039 TTAAACCTCGAGAAAATAAAGGAACA 57.320 30.769 15.71 0.00 0.00 3.18
637 647 9.405587 CTGCAAAATTTATTAAACCTCGAGAAA 57.594 29.630 15.71 4.77 0.00 2.52
641 651 6.682746 TGCTGCAAAATTTATTAAACCTCGA 58.317 32.000 0.00 0.00 0.00 4.04
642 652 6.942886 TGCTGCAAAATTTATTAAACCTCG 57.057 33.333 0.00 0.00 0.00 4.63
685 695 1.067669 TGTCTCTGAGCGCATATGTCC 59.932 52.381 11.47 0.00 0.00 4.02
771 782 9.600646 GTTGCTAAAAACAAAACAAGCTAAAAA 57.399 25.926 0.00 0.00 0.00 1.94
772 783 8.774586 TGTTGCTAAAAACAAAACAAGCTAAAA 58.225 25.926 0.00 0.00 37.12 1.52
773 784 8.311650 TGTTGCTAAAAACAAAACAAGCTAAA 57.688 26.923 0.00 0.00 37.12 1.85
774 785 7.891183 TGTTGCTAAAAACAAAACAAGCTAA 57.109 28.000 0.00 0.00 37.12 3.09
775 786 7.223777 GGATGTTGCTAAAAACAAAACAAGCTA 59.776 33.333 0.00 0.00 42.98 3.32
776 787 6.037062 GGATGTTGCTAAAAACAAAACAAGCT 59.963 34.615 0.00 0.00 42.98 3.74
777 788 6.191661 GGATGTTGCTAAAAACAAAACAAGC 58.808 36.000 0.00 0.00 42.98 4.01
778 789 6.314896 TGGGATGTTGCTAAAAACAAAACAAG 59.685 34.615 0.00 0.00 42.98 3.16
779 790 6.173339 TGGGATGTTGCTAAAAACAAAACAA 58.827 32.000 0.00 0.00 42.98 2.83
780 791 5.734720 TGGGATGTTGCTAAAAACAAAACA 58.265 33.333 0.00 0.00 42.98 2.83
781 792 6.045955 TCTGGGATGTTGCTAAAAACAAAAC 58.954 36.000 0.00 0.00 42.98 2.43
782 793 6.227298 TCTGGGATGTTGCTAAAAACAAAA 57.773 33.333 0.00 0.00 42.98 2.44
783 794 5.860941 TCTGGGATGTTGCTAAAAACAAA 57.139 34.783 0.00 0.00 42.98 2.83
784 795 5.860941 TTCTGGGATGTTGCTAAAAACAA 57.139 34.783 0.00 0.00 42.98 2.83
785 796 7.531857 TTATTCTGGGATGTTGCTAAAAACA 57.468 32.000 0.00 0.00 43.82 2.83
786 797 7.061789 CGTTTATTCTGGGATGTTGCTAAAAAC 59.938 37.037 0.00 0.00 0.00 2.43
794 834 4.261801 AGTCCGTTTATTCTGGGATGTTG 58.738 43.478 0.00 0.00 0.00 3.33
1242 1525 0.622665 ACAGGGCAGAAAGCTAGCAT 59.377 50.000 18.83 0.65 44.79 3.79
1443 1730 0.320334 TGACGAATTCGCTGGCTTCA 60.320 50.000 27.03 18.35 44.43 3.02
1445 1732 0.037326 TCTGACGAATTCGCTGGCTT 60.037 50.000 27.03 6.94 44.43 4.35
1575 1862 1.267806 CTCGGTGAAGCTGTGCAAAAT 59.732 47.619 0.00 0.00 0.00 1.82
1658 1945 5.827797 AGACAGTAAATGCTTTGGAAGTTGA 59.172 36.000 0.00 0.00 0.00 3.18
1715 2002 9.228949 CCAAAATTGGTTCATTTCCATATTTGA 57.771 29.630 16.82 0.00 43.43 2.69
1872 2162 7.596494 ACACTTGATGAATTCACCATAACTTG 58.404 34.615 11.07 3.05 32.84 3.16
2146 2436 5.069781 AGCATTAGTACTAAGAGAAGGCTGG 59.930 44.000 19.58 2.27 0.00 4.85
2303 2593 8.832521 ACTCGATCACAAATTTAAAGTTACACA 58.167 29.630 0.00 0.00 0.00 3.72
2387 2677 9.436957 TTCAGTTATTCTAAACATTCCTCTGAC 57.563 33.333 0.00 0.00 0.00 3.51
2484 2774 4.746535 TCGAGGGCACAAGTGATAATTA 57.253 40.909 4.04 0.00 0.00 1.40
2582 2872 4.105486 TCATTTTCTCTCGCATAGTCACG 58.895 43.478 0.00 0.00 0.00 4.35
2592 2882 5.287170 TGCACATTTCTCATTTTCTCTCG 57.713 39.130 0.00 0.00 0.00 4.04
2838 3128 4.688879 CACAGATGCTGAAAGGTACGTTAA 59.311 41.667 0.43 0.00 35.18 2.01
2862 3152 0.378257 AGGCACGAATAATGCAAGCG 59.622 50.000 0.00 0.00 45.27 4.68
2876 3166 1.651987 TCTTAACTGCGCATAGGCAC 58.348 50.000 12.24 0.00 41.24 5.01
2885 3175 9.855361 CAATTTTCTACAGATATCTTAACTGCG 57.145 33.333 1.33 0.00 35.38 5.18
2897 3187 8.306761 GGGAAAACATGACAATTTTCTACAGAT 58.693 33.333 19.68 0.00 42.13 2.90
3011 3302 3.609853 ACTGTGATGCCATTTATCGTGT 58.390 40.909 0.00 0.00 0.00 4.49
3094 3385 1.908299 GTTCACCCAGCCCCTTTGG 60.908 63.158 0.00 0.00 35.41 3.28
3121 3412 4.827304 TGAGTCGCATTCAATTTTGTCA 57.173 36.364 0.00 0.00 0.00 3.58
3204 3495 6.215845 GCCTGTGACAAAATTTAACTGACAT 58.784 36.000 0.00 0.00 0.00 3.06
3212 3503 5.136828 TGAGAAGGCCTGTGACAAAATTTA 58.863 37.500 5.69 0.00 0.00 1.40
3225 3516 3.425162 AATTCGAAACTGAGAAGGCCT 57.575 42.857 0.00 0.00 0.00 5.19
3333 3624 0.251634 TGCCATACATCCACGCAAGA 59.748 50.000 0.00 0.00 43.62 3.02
3334 3625 1.002142 CATGCCATACATCCACGCAAG 60.002 52.381 0.00 0.00 36.64 4.01
3434 3725 9.722056 CAGCTAATAGGAAAAATATTCACACAC 57.278 33.333 0.00 0.00 0.00 3.82
3486 3777 2.413837 GGTCAGCGTGAACACTTGTAT 58.586 47.619 3.51 0.00 33.38 2.29
3681 3975 9.057089 GGTAGAACTGTGGAAATTATAGGAATG 57.943 37.037 0.00 0.00 0.00 2.67
3682 3976 9.004231 AGGTAGAACTGTGGAAATTATAGGAAT 57.996 33.333 0.00 0.00 0.00 3.01
3689 3983 7.016153 ACATCAGGTAGAACTGTGGAAATTA 57.984 36.000 0.00 0.00 39.48 1.40
3754 4048 5.757320 CAGCCCAAAATGTGTCAAATTGTAA 59.243 36.000 0.00 0.00 0.00 2.41
3835 4132 0.588233 GCGATGCATCAAGCTGTTCG 60.588 55.000 25.70 11.54 45.94 3.95
4048 4345 7.227314 CACAGAATCGAGATTGATTGGGATAAA 59.773 37.037 2.72 0.00 38.65 1.40
4064 4361 0.904865 AGCTCCCCACACAGAATCGA 60.905 55.000 0.00 0.00 0.00 3.59
4066 4363 0.393537 CCAGCTCCCCACACAGAATC 60.394 60.000 0.00 0.00 0.00 2.52
4100 4397 6.891361 TGATGGACATCAATTCCTGTTGTATT 59.109 34.615 12.27 0.00 44.14 1.89
4101 4398 6.425735 TGATGGACATCAATTCCTGTTGTAT 58.574 36.000 12.27 0.00 44.14 2.29
4121 4418 2.743664 TGCAGGTTTCGTCTTGATGATG 59.256 45.455 0.00 0.00 0.00 3.07
4174 4471 4.338879 ACAAAAGGGTCATCATGAAGAGG 58.661 43.478 0.00 0.00 0.00 3.69
4380 4677 0.392998 GATGCTCAGGAAAGCGGGAA 60.393 55.000 0.00 0.00 45.54 3.97
4661 4982 4.818534 TCAGCATTGTTTCTGTCTGTTC 57.181 40.909 0.00 0.00 0.00 3.18
4662 4983 4.037208 CCTTCAGCATTGTTTCTGTCTGTT 59.963 41.667 0.00 0.00 0.00 3.16
4663 4984 3.567164 CCTTCAGCATTGTTTCTGTCTGT 59.433 43.478 0.00 0.00 0.00 3.41
4664 4985 3.817084 TCCTTCAGCATTGTTTCTGTCTG 59.183 43.478 0.00 0.00 0.00 3.51
4665 4986 3.817647 GTCCTTCAGCATTGTTTCTGTCT 59.182 43.478 0.00 0.00 0.00 3.41
4666 4987 3.364366 CGTCCTTCAGCATTGTTTCTGTC 60.364 47.826 0.00 0.00 0.00 3.51
4667 4988 2.549754 CGTCCTTCAGCATTGTTTCTGT 59.450 45.455 0.00 0.00 0.00 3.41
4668 4989 2.549754 ACGTCCTTCAGCATTGTTTCTG 59.450 45.455 0.00 0.00 0.00 3.02
4669 4990 2.549754 CACGTCCTTCAGCATTGTTTCT 59.450 45.455 0.00 0.00 0.00 2.52
4670 4991 2.548057 TCACGTCCTTCAGCATTGTTTC 59.452 45.455 0.00 0.00 0.00 2.78
4671 4992 2.571212 TCACGTCCTTCAGCATTGTTT 58.429 42.857 0.00 0.00 0.00 2.83
4672 4993 2.254546 TCACGTCCTTCAGCATTGTT 57.745 45.000 0.00 0.00 0.00 2.83
4673 4994 2.079158 CATCACGTCCTTCAGCATTGT 58.921 47.619 0.00 0.00 0.00 2.71
4674 4995 2.349590 TCATCACGTCCTTCAGCATTG 58.650 47.619 0.00 0.00 0.00 2.82
4675 4996 2.625737 CTCATCACGTCCTTCAGCATT 58.374 47.619 0.00 0.00 0.00 3.56
4676 4997 1.134580 CCTCATCACGTCCTTCAGCAT 60.135 52.381 0.00 0.00 0.00 3.79
4677 4998 0.247460 CCTCATCACGTCCTTCAGCA 59.753 55.000 0.00 0.00 0.00 4.41
4678 4999 1.086634 GCCTCATCACGTCCTTCAGC 61.087 60.000 0.00 0.00 0.00 4.26
4679 5000 0.247460 TGCCTCATCACGTCCTTCAG 59.753 55.000 0.00 0.00 0.00 3.02
4680 5001 0.904649 ATGCCTCATCACGTCCTTCA 59.095 50.000 0.00 0.00 0.00 3.02
4681 5002 1.293924 CATGCCTCATCACGTCCTTC 58.706 55.000 0.00 0.00 0.00 3.46
4682 5003 0.745845 GCATGCCTCATCACGTCCTT 60.746 55.000 6.36 0.00 0.00 3.36
4683 5004 1.153289 GCATGCCTCATCACGTCCT 60.153 57.895 6.36 0.00 0.00 3.85
4684 5005 1.450134 TGCATGCCTCATCACGTCC 60.450 57.895 16.68 0.00 0.00 4.79
4815 5136 2.026822 CAGATCTATTCCCATTCCCCCG 60.027 54.545 0.00 0.00 0.00 5.73
4817 5138 4.537688 TCATCAGATCTATTCCCATTCCCC 59.462 45.833 0.00 0.00 0.00 4.81
4821 5142 5.486775 ACCGATCATCAGATCTATTCCCATT 59.513 40.000 0.00 0.00 46.84 3.16
5007 5328 3.692593 CAGCATCATCAACTTCATCACCA 59.307 43.478 0.00 0.00 0.00 4.17
5157 5478 3.942115 GACCCTCTTTAGATGGCTCAAAC 59.058 47.826 1.49 0.00 33.76 2.93
5491 5812 4.944317 GCTAAGTTGATCCCTAGCAAAAGT 59.056 41.667 7.29 0.00 31.70 2.66
5805 6126 2.544721 TGGCTCATCTTCTCTCCACTT 58.455 47.619 0.00 0.00 0.00 3.16
6245 6569 5.294060 ACACAAAACACAAAATTCAGCATCC 59.706 36.000 0.00 0.00 0.00 3.51
6313 6639 4.206375 TGCTCCTGAGAAACAAATGACAA 58.794 39.130 0.00 0.00 0.00 3.18
6314 6640 3.819368 TGCTCCTGAGAAACAAATGACA 58.181 40.909 0.00 0.00 0.00 3.58
6326 6652 1.205655 TCTCCATTCGTTGCTCCTGAG 59.794 52.381 0.00 0.00 0.00 3.35
6612 6938 6.216456 AGGTTGGATCTCTAAGAAATGGAAGT 59.784 38.462 0.00 0.00 0.00 3.01
6683 7099 4.373156 AAACCAGGAAATCTGCAGTACT 57.627 40.909 14.67 0.00 42.05 2.73
6952 7382 8.324163 ACAATGCTTAACTTATTCGTCTTCTT 57.676 30.769 0.00 0.00 0.00 2.52
7106 7542 1.274167 CCAAATGTTGCTCACTGGCAT 59.726 47.619 0.00 0.00 42.09 4.40
7116 7552 3.317150 GGTTAACTCAGCCAAATGTTGC 58.683 45.455 5.42 0.00 0.00 4.17
7177 7613 1.677820 CGGAAGGGCGAGTACCAAATT 60.678 52.381 0.00 0.00 0.00 1.82
7267 7703 5.760253 CCAAATCAGCGACAACTAATAGGAT 59.240 40.000 0.00 0.00 0.00 3.24
7272 7710 5.351465 CAGTACCAAATCAGCGACAACTAAT 59.649 40.000 0.00 0.00 0.00 1.73
7296 7734 2.358003 AGCTGTCGCTGACTTGGC 60.358 61.111 9.49 10.21 46.86 4.52
7368 10536 9.249053 CATACCCTTCTCATATCATGTACTAGT 57.751 37.037 0.00 0.00 0.00 2.57
7369 10537 8.690884 CCATACCCTTCTCATATCATGTACTAG 58.309 40.741 0.00 0.00 0.00 2.57
7370 10538 8.398743 TCCATACCCTTCTCATATCATGTACTA 58.601 37.037 0.00 0.00 0.00 1.82
7371 10539 7.248976 TCCATACCCTTCTCATATCATGTACT 58.751 38.462 0.00 0.00 0.00 2.73
7372 10540 7.482169 TCCATACCCTTCTCATATCATGTAC 57.518 40.000 0.00 0.00 0.00 2.90
7395 10563 1.617740 GCAAGCGCCAGTTTGTAATC 58.382 50.000 2.29 0.00 40.16 1.75
7545 11757 1.539776 CGTTTGCAGTTTCGGCTTGC 61.540 55.000 0.00 0.00 0.00 4.01
7571 11783 7.929245 TCGGGAATATTTTCTATCGTGAAATGA 59.071 33.333 0.00 0.00 36.07 2.57
7613 11825 9.884465 CCAGTGATTTCGGAAATATTTTCTATC 57.116 33.333 15.50 4.59 0.00 2.08
7614 11826 9.408648 ACCAGTGATTTCGGAAATATTTTCTAT 57.591 29.630 15.50 0.00 0.00 1.98
7615 11827 8.673711 CACCAGTGATTTCGGAAATATTTTCTA 58.326 33.333 15.50 0.00 0.00 2.10
7616 11828 7.176690 ACACCAGTGATTTCGGAAATATTTTCT 59.823 33.333 15.50 7.47 0.00 2.52
7617 11829 7.312899 ACACCAGTGATTTCGGAAATATTTTC 58.687 34.615 15.50 5.18 0.00 2.29
7618 11830 7.227049 ACACCAGTGATTTCGGAAATATTTT 57.773 32.000 15.50 0.00 0.00 1.82
7619 11831 6.834168 ACACCAGTGATTTCGGAAATATTT 57.166 33.333 15.50 0.00 0.00 1.40
7620 11832 6.208599 ACAACACCAGTGATTTCGGAAATATT 59.791 34.615 15.50 2.58 0.00 1.28
7621 11833 5.710099 ACAACACCAGTGATTTCGGAAATAT 59.290 36.000 15.50 3.18 0.00 1.28
7622 11834 5.067273 ACAACACCAGTGATTTCGGAAATA 58.933 37.500 15.50 2.90 0.00 1.40
7623 11835 3.888930 ACAACACCAGTGATTTCGGAAAT 59.111 39.130 15.45 15.45 0.00 2.17
7624 11836 3.283751 ACAACACCAGTGATTTCGGAAA 58.716 40.909 5.52 5.52 0.00 3.13
7625 11837 2.875933 GACAACACCAGTGATTTCGGAA 59.124 45.455 4.48 0.00 0.00 4.30
7626 11838 2.158885 TGACAACACCAGTGATTTCGGA 60.159 45.455 4.48 0.00 0.00 4.55
7627 11839 2.217750 TGACAACACCAGTGATTTCGG 58.782 47.619 4.48 0.00 0.00 4.30
7628 11840 3.303990 CCTTGACAACACCAGTGATTTCG 60.304 47.826 4.48 0.00 0.00 3.46
7629 11841 3.004734 CCCTTGACAACACCAGTGATTTC 59.995 47.826 4.48 0.00 0.00 2.17
7630 11842 2.958355 CCCTTGACAACACCAGTGATTT 59.042 45.455 4.48 0.00 0.00 2.17
7631 11843 2.091885 ACCCTTGACAACACCAGTGATT 60.092 45.455 4.48 0.00 0.00 2.57
7632 11844 1.494721 ACCCTTGACAACACCAGTGAT 59.505 47.619 4.48 0.00 0.00 3.06
7633 11845 0.916086 ACCCTTGACAACACCAGTGA 59.084 50.000 4.48 0.00 0.00 3.41
7634 11846 2.218603 GTACCCTTGACAACACCAGTG 58.781 52.381 0.00 0.00 0.00 3.66
7635 11847 1.142262 GGTACCCTTGACAACACCAGT 59.858 52.381 0.00 0.00 0.00 4.00
7636 11848 1.892209 GGTACCCTTGACAACACCAG 58.108 55.000 0.00 0.00 0.00 4.00
7651 11863 5.092781 CACGATAATTGTTGCAAAGGGTAC 58.907 41.667 0.00 0.00 0.00 3.34
7652 11864 5.004448 TCACGATAATTGTTGCAAAGGGTA 58.996 37.500 0.00 0.00 0.00 3.69
7653 11865 3.823873 TCACGATAATTGTTGCAAAGGGT 59.176 39.130 0.00 0.00 0.00 4.34
7654 11866 4.433186 TCACGATAATTGTTGCAAAGGG 57.567 40.909 0.00 0.00 0.00 3.95
7655 11867 5.920273 AGTTTCACGATAATTGTTGCAAAGG 59.080 36.000 0.00 0.00 0.00 3.11
7656 11868 6.857964 AGAGTTTCACGATAATTGTTGCAAAG 59.142 34.615 0.00 0.00 0.00 2.77
7657 11869 6.636447 CAGAGTTTCACGATAATTGTTGCAAA 59.364 34.615 0.00 0.00 0.00 3.68
7658 11870 6.142139 CAGAGTTTCACGATAATTGTTGCAA 58.858 36.000 0.00 0.00 0.00 4.08
7659 11871 5.688823 CAGAGTTTCACGATAATTGTTGCA 58.311 37.500 0.00 0.00 0.00 4.08
7660 11872 4.554973 GCAGAGTTTCACGATAATTGTTGC 59.445 41.667 0.00 0.00 0.00 4.17
7661 11873 5.791974 CAGCAGAGTTTCACGATAATTGTTG 59.208 40.000 0.00 0.00 0.00 3.33
7662 11874 5.617751 GCAGCAGAGTTTCACGATAATTGTT 60.618 40.000 0.00 0.00 0.00 2.83
7663 11875 4.142816 GCAGCAGAGTTTCACGATAATTGT 60.143 41.667 0.00 0.00 0.00 2.71
7664 11876 4.093998 AGCAGCAGAGTTTCACGATAATTG 59.906 41.667 0.00 0.00 0.00 2.32
7665 11877 4.256920 AGCAGCAGAGTTTCACGATAATT 58.743 39.130 0.00 0.00 0.00 1.40
7666 11878 3.866651 AGCAGCAGAGTTTCACGATAAT 58.133 40.909 0.00 0.00 0.00 1.28
7667 11879 3.319137 AGCAGCAGAGTTTCACGATAA 57.681 42.857 0.00 0.00 0.00 1.75
7668 11880 4.424626 CTTAGCAGCAGAGTTTCACGATA 58.575 43.478 0.00 0.00 0.00 2.92
7669 11881 3.257393 CTTAGCAGCAGAGTTTCACGAT 58.743 45.455 0.00 0.00 0.00 3.73
7670 11882 2.610479 CCTTAGCAGCAGAGTTTCACGA 60.610 50.000 0.00 0.00 0.00 4.35
7671 11883 1.728971 CCTTAGCAGCAGAGTTTCACG 59.271 52.381 0.00 0.00 0.00 4.35
7672 11884 2.481952 CACCTTAGCAGCAGAGTTTCAC 59.518 50.000 0.00 0.00 0.00 3.18
7673 11885 2.104792 ACACCTTAGCAGCAGAGTTTCA 59.895 45.455 0.00 0.00 0.00 2.69
7674 11886 2.772287 ACACCTTAGCAGCAGAGTTTC 58.228 47.619 0.00 0.00 0.00 2.78
7675 11887 2.938956 ACACCTTAGCAGCAGAGTTT 57.061 45.000 0.00 0.00 0.00 2.66
7676 11888 3.772025 AGATACACCTTAGCAGCAGAGTT 59.228 43.478 0.00 0.00 0.00 3.01
7677 11889 3.370104 AGATACACCTTAGCAGCAGAGT 58.630 45.455 0.00 0.00 0.00 3.24
7678 11890 3.636300 AGAGATACACCTTAGCAGCAGAG 59.364 47.826 0.00 0.00 0.00 3.35
7679 11891 3.382865 CAGAGATACACCTTAGCAGCAGA 59.617 47.826 0.00 0.00 0.00 4.26
7680 11892 3.382865 TCAGAGATACACCTTAGCAGCAG 59.617 47.826 0.00 0.00 0.00 4.24
7681 11893 3.131223 GTCAGAGATACACCTTAGCAGCA 59.869 47.826 0.00 0.00 0.00 4.41
7682 11894 3.712187 GTCAGAGATACACCTTAGCAGC 58.288 50.000 0.00 0.00 0.00 5.25
7683 11895 3.243234 CCGTCAGAGATACACCTTAGCAG 60.243 52.174 0.00 0.00 0.00 4.24
7684 11896 2.688446 CCGTCAGAGATACACCTTAGCA 59.312 50.000 0.00 0.00 0.00 3.49
7685 11897 2.950309 TCCGTCAGAGATACACCTTAGC 59.050 50.000 0.00 0.00 0.00 3.09
7686 11898 5.067273 AGATCCGTCAGAGATACACCTTAG 58.933 45.833 0.00 0.00 0.00 2.18
7687 11899 5.050126 AGATCCGTCAGAGATACACCTTA 57.950 43.478 0.00 0.00 0.00 2.69
7688 11900 3.886505 GAGATCCGTCAGAGATACACCTT 59.113 47.826 0.00 0.00 0.00 3.50
7689 11901 3.482436 GAGATCCGTCAGAGATACACCT 58.518 50.000 0.00 0.00 0.00 4.00
7690 11902 2.224549 CGAGATCCGTCAGAGATACACC 59.775 54.545 0.00 0.00 0.00 4.16
7691 11903 2.350007 GCGAGATCCGTCAGAGATACAC 60.350 54.545 5.66 0.00 41.15 2.90
7692 11904 1.874231 GCGAGATCCGTCAGAGATACA 59.126 52.381 5.66 0.00 41.15 2.29
7693 11905 1.136197 CGCGAGATCCGTCAGAGATAC 60.136 57.143 0.00 0.00 41.15 2.24
7694 11906 1.149148 CGCGAGATCCGTCAGAGATA 58.851 55.000 0.00 0.00 41.15 1.98
7695 11907 1.511318 CCGCGAGATCCGTCAGAGAT 61.511 60.000 8.23 0.00 41.15 2.75
7696 11908 2.180862 CCGCGAGATCCGTCAGAGA 61.181 63.158 8.23 0.00 41.15 3.10
7697 11909 1.715862 TTCCGCGAGATCCGTCAGAG 61.716 60.000 8.23 0.00 41.15 3.35
7698 11910 1.101635 ATTCCGCGAGATCCGTCAGA 61.102 55.000 8.23 0.00 41.15 3.27
7699 11911 0.249073 AATTCCGCGAGATCCGTCAG 60.249 55.000 8.23 0.00 41.15 3.51
7700 11912 0.174845 AAATTCCGCGAGATCCGTCA 59.825 50.000 8.23 0.00 41.15 4.35
7701 11913 0.577269 CAAATTCCGCGAGATCCGTC 59.423 55.000 8.23 0.00 41.15 4.79
7702 11914 0.174845 TCAAATTCCGCGAGATCCGT 59.825 50.000 8.23 0.00 41.15 4.69
7703 11915 1.502231 ATCAAATTCCGCGAGATCCG 58.498 50.000 8.23 0.00 42.21 4.18
7704 11916 4.058817 ACTAATCAAATTCCGCGAGATCC 58.941 43.478 8.23 0.00 0.00 3.36
7705 11917 4.609336 GCACTAATCAAATTCCGCGAGATC 60.609 45.833 8.23 0.00 0.00 2.75
7706 11918 3.248602 GCACTAATCAAATTCCGCGAGAT 59.751 43.478 8.23 0.00 0.00 2.75
7707 11919 2.607635 GCACTAATCAAATTCCGCGAGA 59.392 45.455 8.23 0.00 0.00 4.04
7708 11920 2.609459 AGCACTAATCAAATTCCGCGAG 59.391 45.455 8.23 0.00 0.00 5.03
7709 11921 2.351418 CAGCACTAATCAAATTCCGCGA 59.649 45.455 8.23 0.00 0.00 5.87
7710 11922 2.539547 CCAGCACTAATCAAATTCCGCG 60.540 50.000 0.00 0.00 0.00 6.46
7711 11923 2.423538 ACCAGCACTAATCAAATTCCGC 59.576 45.455 0.00 0.00 0.00 5.54
7712 11924 3.941483 AGACCAGCACTAATCAAATTCCG 59.059 43.478 0.00 0.00 0.00 4.30
7713 11925 5.904362 AAGACCAGCACTAATCAAATTCC 57.096 39.130 0.00 0.00 0.00 3.01
7714 11926 6.913170 TCAAAGACCAGCACTAATCAAATTC 58.087 36.000 0.00 0.00 0.00 2.17
7715 11927 6.899393 TCAAAGACCAGCACTAATCAAATT 57.101 33.333 0.00 0.00 0.00 1.82
7716 11928 6.626623 GCATCAAAGACCAGCACTAATCAAAT 60.627 38.462 0.00 0.00 0.00 2.32
7717 11929 5.335897 GCATCAAAGACCAGCACTAATCAAA 60.336 40.000 0.00 0.00 0.00 2.69
7718 11930 4.156556 GCATCAAAGACCAGCACTAATCAA 59.843 41.667 0.00 0.00 0.00 2.57
7719 11931 3.691118 GCATCAAAGACCAGCACTAATCA 59.309 43.478 0.00 0.00 0.00 2.57
7720 11932 3.691118 TGCATCAAAGACCAGCACTAATC 59.309 43.478 0.00 0.00 0.00 1.75
7721 11933 3.689347 TGCATCAAAGACCAGCACTAAT 58.311 40.909 0.00 0.00 0.00 1.73
7722 11934 3.138884 TGCATCAAAGACCAGCACTAA 57.861 42.857 0.00 0.00 0.00 2.24
7723 11935 2.857186 TGCATCAAAGACCAGCACTA 57.143 45.000 0.00 0.00 0.00 2.74
7724 11936 2.089980 GATGCATCAAAGACCAGCACT 58.910 47.619 21.92 0.00 38.12 4.40
7725 11937 2.089980 AGATGCATCAAAGACCAGCAC 58.910 47.619 27.81 0.00 38.12 4.40
7726 11938 2.502142 AGATGCATCAAAGACCAGCA 57.498 45.000 27.81 0.00 39.79 4.41
7727 11939 5.066893 TCAAATAGATGCATCAAAGACCAGC 59.933 40.000 27.81 0.00 0.00 4.85
7728 11940 6.688637 TCAAATAGATGCATCAAAGACCAG 57.311 37.500 27.81 10.08 0.00 4.00
7729 11941 7.558807 AGATTCAAATAGATGCATCAAAGACCA 59.441 33.333 27.81 7.87 0.00 4.02
7730 11942 7.938715 AGATTCAAATAGATGCATCAAAGACC 58.061 34.615 27.81 11.78 0.00 3.85
7731 11943 7.797587 CGAGATTCAAATAGATGCATCAAAGAC 59.202 37.037 27.81 9.97 0.00 3.01
7732 11944 7.496920 ACGAGATTCAAATAGATGCATCAAAGA 59.503 33.333 27.81 14.72 0.00 2.52
7733 11945 7.637229 ACGAGATTCAAATAGATGCATCAAAG 58.363 34.615 27.81 12.78 0.00 2.77
7734 11946 7.496920 AGACGAGATTCAAATAGATGCATCAAA 59.503 33.333 27.81 15.99 0.00 2.69
7735 11947 6.988580 AGACGAGATTCAAATAGATGCATCAA 59.011 34.615 27.81 12.86 0.00 2.57
7736 11948 6.519382 AGACGAGATTCAAATAGATGCATCA 58.481 36.000 27.81 14.42 0.00 3.07
7737 11949 7.418840 AAGACGAGATTCAAATAGATGCATC 57.581 36.000 19.37 19.37 0.00 3.91
7738 11950 7.637229 CAAAGACGAGATTCAAATAGATGCAT 58.363 34.615 0.00 0.00 0.00 3.96
7739 11951 6.457392 GCAAAGACGAGATTCAAATAGATGCA 60.457 38.462 0.00 0.00 0.00 3.96
7740 11952 5.906285 GCAAAGACGAGATTCAAATAGATGC 59.094 40.000 0.00 0.00 0.00 3.91
7741 11953 7.010830 TGAGCAAAGACGAGATTCAAATAGATG 59.989 37.037 0.00 0.00 0.00 2.90
7742 11954 7.044181 TGAGCAAAGACGAGATTCAAATAGAT 58.956 34.615 0.00 0.00 0.00 1.98
7743 11955 6.398095 TGAGCAAAGACGAGATTCAAATAGA 58.602 36.000 0.00 0.00 0.00 1.98
7744 11956 6.653273 TGAGCAAAGACGAGATTCAAATAG 57.347 37.500 0.00 0.00 0.00 1.73
7745 11957 7.044181 AGATGAGCAAAGACGAGATTCAAATA 58.956 34.615 0.00 0.00 0.00 1.40
7746 11958 5.879223 AGATGAGCAAAGACGAGATTCAAAT 59.121 36.000 0.00 0.00 0.00 2.32
7747 11959 5.240891 AGATGAGCAAAGACGAGATTCAAA 58.759 37.500 0.00 0.00 0.00 2.69
7748 11960 4.825422 AGATGAGCAAAGACGAGATTCAA 58.175 39.130 0.00 0.00 0.00 2.69
7749 11961 4.462508 AGATGAGCAAAGACGAGATTCA 57.537 40.909 0.00 0.00 0.00 2.57
7750 11962 5.793026 AAAGATGAGCAAAGACGAGATTC 57.207 39.130 0.00 0.00 0.00 2.52
7751 11963 7.550551 TGAATAAAGATGAGCAAAGACGAGATT 59.449 33.333 0.00 0.00 0.00 2.40
7752 11964 7.010923 GTGAATAAAGATGAGCAAAGACGAGAT 59.989 37.037 0.00 0.00 0.00 2.75
7753 11965 6.311445 GTGAATAAAGATGAGCAAAGACGAGA 59.689 38.462 0.00 0.00 0.00 4.04
7754 11966 6.473521 GTGAATAAAGATGAGCAAAGACGAG 58.526 40.000 0.00 0.00 0.00 4.18
7755 11967 5.062183 CGTGAATAAAGATGAGCAAAGACGA 59.938 40.000 0.00 0.00 0.00 4.20
7756 11968 5.163953 ACGTGAATAAAGATGAGCAAAGACG 60.164 40.000 0.00 0.00 0.00 4.18
7757 11969 6.017933 CACGTGAATAAAGATGAGCAAAGAC 58.982 40.000 10.90 0.00 0.00 3.01
7758 11970 5.700832 ACACGTGAATAAAGATGAGCAAAGA 59.299 36.000 25.01 0.00 0.00 2.52
7759 11971 5.931532 ACACGTGAATAAAGATGAGCAAAG 58.068 37.500 25.01 0.00 0.00 2.77
7760 11972 5.700832 AGACACGTGAATAAAGATGAGCAAA 59.299 36.000 25.01 0.00 0.00 3.68
7761 11973 5.237815 AGACACGTGAATAAAGATGAGCAA 58.762 37.500 25.01 0.00 0.00 3.91
7762 11974 4.820897 AGACACGTGAATAAAGATGAGCA 58.179 39.130 25.01 0.00 0.00 4.26
7763 11975 7.327275 CCTATAGACACGTGAATAAAGATGAGC 59.673 40.741 25.01 0.00 0.00 4.26
7764 11976 8.353684 ACCTATAGACACGTGAATAAAGATGAG 58.646 37.037 25.01 5.64 0.00 2.90
7765 11977 8.234136 ACCTATAGACACGTGAATAAAGATGA 57.766 34.615 25.01 0.00 0.00 2.92
7766 11978 8.755941 CAACCTATAGACACGTGAATAAAGATG 58.244 37.037 25.01 11.48 0.00 2.90
7767 11979 7.926555 CCAACCTATAGACACGTGAATAAAGAT 59.073 37.037 25.01 7.68 0.00 2.40
7768 11980 7.123098 TCCAACCTATAGACACGTGAATAAAGA 59.877 37.037 25.01 0.00 0.00 2.52
7769 11981 7.262772 TCCAACCTATAGACACGTGAATAAAG 58.737 38.462 25.01 13.04 0.00 1.85
7770 11982 7.172868 TCCAACCTATAGACACGTGAATAAA 57.827 36.000 25.01 3.51 0.00 1.40
7771 11983 6.778834 TCCAACCTATAGACACGTGAATAA 57.221 37.500 25.01 4.78 0.00 1.40
7772 11984 6.971726 ATCCAACCTATAGACACGTGAATA 57.028 37.500 25.01 14.39 0.00 1.75
7773 11985 5.871396 ATCCAACCTATAGACACGTGAAT 57.129 39.130 25.01 14.47 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.