AutoCloner

Multiple sequence alignment - TraesCS2D01G251700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G251700	chr2D	100.000	3848	0	0	1	3848	301760556	301764403	0.000000e+00	7107.0
1	TraesCS2D01G251700	chr2D	89.796	392	32	7	18	405	16365138	16365525	2.670000e-136	496.0
2	TraesCS2D01G251700	chr2D	90.289	381	30	7	18	394	94347659	94348036	3.450000e-135	492.0
3	TraesCS2D01G251700	chr2D	87.019	416	40	9	11	418	382335207	382335616	1.260000e-124	457.0
4	TraesCS2D01G251700	chr2D	86.179	123	15	1	2870	2992	301816686	301816806	8.670000e-27	132.0
5	TraesCS2D01G251700	chr2B	90.527	1119	52	23	437	1528	356581737	356582828	0.000000e+00	1430.0
6	TraesCS2D01G251700	chr2B	89.600	1000	47	24	1872	2855	356582834	356583792	0.000000e+00	1218.0
7	TraesCS2D01G251700	chr2B	89.474	380	32	8	18	393	28667919	28668294	1.250000e-129	473.0
8	TraesCS2D01G251700	chr2B	83.942	137	18	3	2857	2992	539461519	539461652	1.120000e-25	128.0
9	TraesCS2D01G251700	chr2B	85.950	121	11	5	2874	2992	372225835	372225951	1.450000e-24	124.0
10	TraesCS2D01G251700	chr2B	86.957	92	8	4	1784	1873	427574372	427574283	2.450000e-17	100.0
11	TraesCS2D01G251700	chr2A	92.139	1005	50	15	1867	2855	378848782	378849773	0.000000e+00	1391.0
12	TraesCS2D01G251700	chr2A	91.856	528	22	10	437	959	378846417	378846928	0.000000e+00	717.0
13	TraesCS2D01G251700	chr2A	83.569	566	21	25	1239	1785	378848271	378848783	7.530000e-127	464.0
14	TraesCS2D01G251700	chr2A	90.351	228	7	6	1035	1247	378846950	378847177	6.290000e-73	285.0
15	TraesCS2D01G251700	chr7B	89.889	989	77	13	2878	3848	535452162	535453145	0.000000e+00	1251.0
16	TraesCS2D01G251700	chr7B	85.211	142	15	5	2857	2997	444173048	444173184	1.440000e-29	141.0
17	TraesCS2D01G251700	chr7B	84.158	101	11	5	1771	1868	65752890	65752988	4.090000e-15	93.5
18	TraesCS2D01G251700	chr7D	89.395	1009	84	12	2857	3848	626497676	626498678	0.000000e+00	1249.0
19	TraesCS2D01G251700	chr7D	88.867	997	83	12	2874	3848	394023179	394024169	0.000000e+00	1201.0
20	TraesCS2D01G251700	chr7D	88.725	612	51	9	2874	3469	91115978	91115369	0.000000e+00	732.0
21	TraesCS2D01G251700	chr4D	89.307	1010	83	16	2857	3848	462754090	462755092	0.000000e+00	1243.0
22	TraesCS2D01G251700	chr4D	88.536	977	97	11	2879	3848	484631862	484632830	0.000000e+00	1170.0
23	TraesCS2D01G251700	chr4D	89.791	382	32	7	18	395	501683641	501684019	2.080000e-132	483.0
24	TraesCS2D01G251700	chr4D	92.683	41	1	2	415	454	238301458	238301497	1.490000e-04	58.4
25	TraesCS2D01G251700	chr5D	89.336	994	82	10	2874	3848	432766946	432767934	0.000000e+00	1227.0
26	TraesCS2D01G251700	chr5D	90.212	378	25	11	18	389	484225548	484225919	2.080000e-132	483.0
27	TraesCS2D01G251700	chr5D	87.624	404	41	6	18	420	531424615	531424220	9.740000e-126	460.0
28	TraesCS2D01G251700	chr5D	89.888	89	4	5	1784	1870	416973500	416973415	4.060000e-20	110.0
29	TraesCS2D01G251700	chr5D	86.022	93	8	5	1784	1873	498655284	498655374	1.140000e-15	95.3
30	TraesCS2D01G251700	chr4A	89.394	990	81	8	2878	3848	195341719	195342703	0.000000e+00	1225.0
31	TraesCS2D01G251700	chr4A	94.737	38	0	2	416	452	636120801	636120837	1.490000e-04	58.4
32	TraesCS2D01G251700	chr4A	94.737	38	0	2	416	451	669085233	669085270	1.490000e-04	58.4
33	TraesCS2D01G251700	chr3D	91.379	870	71	2	2983	3848	63371850	63370981	0.000000e+00	1188.0
34	TraesCS2D01G251700	chr6B	88.687	990	84	16	2878	3848	96682694	96683674	0.000000e+00	1182.0
35	TraesCS2D01G251700	chr5A	86.560	997	122	9	2857	3848	340427745	340426756	0.000000e+00	1088.0
36	TraesCS2D01G251700	chr5A	92.857	42	1	2	416	456	511907241	511907201	4.150000e-05	60.2
37	TraesCS2D01G251700	chr6D	88.293	410	31	10	18	413	423550194	423550600	3.480000e-130	475.0
38	TraesCS2D01G251700	chr6D	90.698	43	2	2	415	456	458389032	458389073	5.370000e-04	56.5
39	TraesCS2D01G251700	chr6D	92.308	39	1	2	415	452	242208116	242208153	2.000000e-03	54.7
40	TraesCS2D01G251700	chr1B	87.345	403	38	10	17	417	601089114	601088723	2.110000e-122	449.0
41	TraesCS2D01G251700	chr1D	86.555	119	16	0	2874	2992	474514946	474514828	8.670000e-27	132.0
42	TraesCS2D01G251700	chr3A	89.474	95	7	3	1777	1868	219794779	219794873	2.430000e-22	117.0
43	TraesCS2D01G251700	chr3A	87.097	93	10	2	1784	1874	710126528	710126620	1.890000e-18	104.0
44	TraesCS2D01G251700	chr5B	86.111	108	11	4	1784	1889	42938930	42939035	3.140000e-21	113.0
45	TraesCS2D01G251700	chr5B	86.957	92	6	6	1784	1872	69812772	69812684	8.800000e-17	99.0
46	TraesCS2D01G251700	chr3B	88.421	95	8	3	1777	1868	256780690	256780784	1.130000e-20	111.0
47	TraesCS2D01G251700	chr3B	89.583	48	3	2	415	460	540810802	540810849	4.150000e-05	60.2
48	TraesCS2D01G251700	chr6A	97.143	35	0	1	415	448	54867415	54867449	1.490000e-04	58.4
49	TraesCS2D01G251700	chr4B	94.595	37	0	2	416	450	643525800	643525836	5.370000e-04	56.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G251700	chr2D	301760556	301764403	3847	False	7107.00	7107	100.00000	1	3848	1	chr2D.!!$F3	3847
1	TraesCS2D01G251700	chr2B	356581737	356583792	2055	False	1324.00	1430	90.06350	437	2855	2	chr2B.!!$F4	2418
2	TraesCS2D01G251700	chr2A	378846417	378849773	3356	False	714.25	1391	89.47875	437	2855	4	chr2A.!!$F1	2418
3	TraesCS2D01G251700	chr7B	535452162	535453145	983	False	1251.00	1251	89.88900	2878	3848	1	chr7B.!!$F3	970
4	TraesCS2D01G251700	chr7D	626497676	626498678	1002	False	1249.00	1249	89.39500	2857	3848	1	chr7D.!!$F2	991
5	TraesCS2D01G251700	chr7D	394023179	394024169	990	False	1201.00	1201	88.86700	2874	3848	1	chr7D.!!$F1	974
6	TraesCS2D01G251700	chr7D	91115369	91115978	609	True	732.00	732	88.72500	2874	3469	1	chr7D.!!$R1	595
7	TraesCS2D01G251700	chr4D	462754090	462755092	1002	False	1243.00	1243	89.30700	2857	3848	1	chr4D.!!$F2	991
8	TraesCS2D01G251700	chr4D	484631862	484632830	968	False	1170.00	1170	88.53600	2879	3848	1	chr4D.!!$F3	969
9	TraesCS2D01G251700	chr5D	432766946	432767934	988	False	1227.00	1227	89.33600	2874	3848	1	chr5D.!!$F1	974
10	TraesCS2D01G251700	chr4A	195341719	195342703	984	False	1225.00	1225	89.39400	2878	3848	1	chr4A.!!$F1	970
11	TraesCS2D01G251700	chr3D	63370981	63371850	869	True	1188.00	1188	91.37900	2983	3848	1	chr3D.!!$R1	865
12	TraesCS2D01G251700	chr6B	96682694	96683674	980	False	1182.00	1182	88.68700	2878	3848	1	chr6B.!!$F1	970
13	TraesCS2D01G251700	chr5A	340426756	340427745	989	True	1088.00	1088	86.56000	2857	3848	1	chr5A.!!$R1	991

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
330	331	0.040692	GGCTCAACCCGACGAAAAAC	60.041	55.0	0.00	0.00	2.43	F
1236	1263	0.106719	ATTCTACAATGGCCGGGTGG	60.107	55.0	2.18	38.77	4.61	F
1745	2901	0.035056	AGAGATCAAACTTGGGCGGG	60.035	55.0	0.00	0.00	6.13	F
2152	3322	0.320771	CACGTTCAACTCCTCCCCAG	60.321	60.0	0.00	0.00	4.45	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1524	2665	0.038159	GGTGTCTCAGTTGACTCCGG	60.038	60.0	0.00	0.00	39.68	5.14	R
2058	3225	0.322816	TTTGCCTGTCTCCTGGATGC	60.323	55.0	0.00	0.00	31.55	3.91	R
2648	3824	0.519077	CTTCCGCTTCTGCAGAAACC	59.481	55.0	28.16	20.29	35.47	3.27	R
3051	4250	0.535102	CTGCCGACTTCCACCTTTGT	60.535	55.0	0.00	0.00	0.00	2.83	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	3.086309	CATTAACGCCGACCACCG	58.914	61.111	0.00	0.00	38.18	4.94
18	19	2.816520	ATTAACGCCGACCACCGC	60.817	61.111	0.00	0.00	36.84	5.68
36	37	3.780173	GCCTCGGCTTCCTCTGCT	61.780	66.667	0.00	0.00	38.26	4.24
37	38	2.985456	CCTCGGCTTCCTCTGCTT	59.015	61.111	0.00	0.00	0.00	3.91
38	39	1.153469	CCTCGGCTTCCTCTGCTTC	60.153	63.158	0.00	0.00	0.00	3.86
39	40	1.518133	CTCGGCTTCCTCTGCTTCG	60.518	63.158	0.00	0.00	0.00	3.79
40	41	2.510238	CGGCTTCCTCTGCTTCGG	60.510	66.667	0.00	0.00	0.00	4.30
41	42	2.821810	GGCTTCCTCTGCTTCGGC	60.822	66.667	0.00	0.00	42.19	5.54
42	43	2.267324	GCTTCCTCTGCTTCGGCT	59.733	61.111	0.00	0.00	42.37	5.52
43	44	2.105466	GCTTCCTCTGCTTCGGCTG	61.105	63.158	0.00	0.00	42.37	4.85
44	45	1.449246	CTTCCTCTGCTTCGGCTGG	60.449	63.158	0.00	0.00	42.37	4.85
45	46	2.866085	CTTCCTCTGCTTCGGCTGGG	62.866	65.000	0.00	0.00	42.37	4.45
92	93	4.078516	GCGGGGGAGCACGTACTT	62.079	66.667	0.00	0.00	37.05	2.24
93	94	2.183555	CGGGGGAGCACGTACTTC	59.816	66.667	0.00	0.00	0.00	3.01
94	95	2.348888	CGGGGGAGCACGTACTTCT	61.349	63.158	0.00	0.00	0.00	2.85
95	96	1.885163	CGGGGGAGCACGTACTTCTT	61.885	60.000	0.00	0.00	0.00	2.52
96	97	0.108281	GGGGGAGCACGTACTTCTTC	60.108	60.000	0.00	0.00	0.00	2.87
97	98	0.458025	GGGGAGCACGTACTTCTTCG	60.458	60.000	0.00	0.00	0.00	3.79
98	99	0.458025	GGGAGCACGTACTTCTTCGG	60.458	60.000	0.00	0.00	0.00	4.30
99	100	1.077089	GGAGCACGTACTTCTTCGGC	61.077	60.000	0.00	0.00	0.00	5.54
100	101	1.403972	GAGCACGTACTTCTTCGGCG	61.404	60.000	0.00	0.00	0.00	6.46
101	102	2.442188	GCACGTACTTCTTCGGCGG	61.442	63.158	7.21	0.00	0.00	6.13
102	103	2.126189	ACGTACTTCTTCGGCGGC	60.126	61.111	7.21	0.00	0.00	6.53
103	104	2.126228	CGTACTTCTTCGGCGGCA	60.126	61.111	10.53	0.00	0.00	5.69
104	105	1.518572	CGTACTTCTTCGGCGGCAT	60.519	57.895	10.53	0.00	0.00	4.40
105	106	1.752501	CGTACTTCTTCGGCGGCATG	61.753	60.000	10.53	0.00	0.00	4.06
106	107	1.153449	TACTTCTTCGGCGGCATGG	60.153	57.895	10.53	0.00	0.00	3.66
107	108	3.880846	CTTCTTCGGCGGCATGGC	61.881	66.667	9.69	9.69	40.44	4.40
130	131	4.095400	GCTGGGAGGGGAGGAGGA	62.095	72.222	0.00	0.00	0.00	3.71
131	132	2.285180	CTGGGAGGGGAGGAGGAG	59.715	72.222	0.00	0.00	0.00	3.69
132	133	3.368501	TGGGAGGGGAGGAGGAGG	61.369	72.222	0.00	0.00	0.00	4.30
133	134	4.179599	GGGAGGGGAGGAGGAGGG	62.180	77.778	0.00	0.00	0.00	4.30
134	135	3.036959	GGAGGGGAGGAGGAGGGA	61.037	72.222	0.00	0.00	0.00	4.20
135	136	2.612251	GAGGGGAGGAGGAGGGAG	59.388	72.222	0.00	0.00	0.00	4.30
136	137	2.015726	GAGGGGAGGAGGAGGGAGA	61.016	68.421	0.00	0.00	0.00	3.71
137	138	1.311371	AGGGGAGGAGGAGGGAGAT	60.311	63.158	0.00	0.00	0.00	2.75
138	139	0.938926	AGGGGAGGAGGAGGGAGATT	60.939	60.000	0.00	0.00	0.00	2.40
139	140	0.766288	GGGGAGGAGGAGGGAGATTG	60.766	65.000	0.00	0.00	0.00	2.67
140	141	0.766288	GGGAGGAGGAGGGAGATTGG	60.766	65.000	0.00	0.00	0.00	3.16
141	142	1.414866	GGAGGAGGAGGGAGATTGGC	61.415	65.000	0.00	0.00	0.00	4.52
142	143	1.753368	GAGGAGGAGGGAGATTGGCG	61.753	65.000	0.00	0.00	0.00	5.69
143	144	2.812619	GGAGGAGGGAGATTGGCGG	61.813	68.421	0.00	0.00	0.00	6.13
144	145	2.770048	AGGAGGGAGATTGGCGGG	60.770	66.667	0.00	0.00	0.00	6.13
145	146	2.768344	GGAGGGAGATTGGCGGGA	60.768	66.667	0.00	0.00	0.00	5.14
146	147	2.812619	GGAGGGAGATTGGCGGGAG	61.813	68.421	0.00	0.00	0.00	4.30
147	148	2.770048	AGGGAGATTGGCGGGAGG	60.770	66.667	0.00	0.00	0.00	4.30
148	149	2.768344	GGGAGATTGGCGGGAGGA	60.768	66.667	0.00	0.00	0.00	3.71
149	150	2.375345	GGGAGATTGGCGGGAGGAA	61.375	63.158	0.00	0.00	0.00	3.36
150	151	1.709994	GGGAGATTGGCGGGAGGAAT	61.710	60.000	0.00	0.00	0.00	3.01
151	152	0.536006	GGAGATTGGCGGGAGGAATG	60.536	60.000	0.00	0.00	0.00	2.67
152	153	0.536006	GAGATTGGCGGGAGGAATGG	60.536	60.000	0.00	0.00	0.00	3.16
153	154	0.988145	AGATTGGCGGGAGGAATGGA	60.988	55.000	0.00	0.00	0.00	3.41
154	155	0.536006	GATTGGCGGGAGGAATGGAG	60.536	60.000	0.00	0.00	0.00	3.86
155	156	0.988145	ATTGGCGGGAGGAATGGAGA	60.988	55.000	0.00	0.00	0.00	3.71
156	157	1.626356	TTGGCGGGAGGAATGGAGAG	61.626	60.000	0.00	0.00	0.00	3.20
157	158	1.762460	GGCGGGAGGAATGGAGAGA	60.762	63.158	0.00	0.00	0.00	3.10
158	159	1.338136	GGCGGGAGGAATGGAGAGAA	61.338	60.000	0.00	0.00	0.00	2.87
159	160	0.761802	GCGGGAGGAATGGAGAGAAT	59.238	55.000	0.00	0.00	0.00	2.40
160	161	1.542108	GCGGGAGGAATGGAGAGAATG	60.542	57.143	0.00	0.00	0.00	2.67
161	162	2.042464	CGGGAGGAATGGAGAGAATGA	58.958	52.381	0.00	0.00	0.00	2.57
162	163	2.036992	CGGGAGGAATGGAGAGAATGAG	59.963	54.545	0.00	0.00	0.00	2.90
163	164	3.312890	GGGAGGAATGGAGAGAATGAGA	58.687	50.000	0.00	0.00	0.00	3.27
164	165	3.324556	GGGAGGAATGGAGAGAATGAGAG	59.675	52.174	0.00	0.00	0.00	3.20
165	166	3.324556	GGAGGAATGGAGAGAATGAGAGG	59.675	52.174	0.00	0.00	0.00	3.69
166	167	3.316501	AGGAATGGAGAGAATGAGAGGG	58.683	50.000	0.00	0.00	0.00	4.30
167	168	3.051496	AGGAATGGAGAGAATGAGAGGGA	60.051	47.826	0.00	0.00	0.00	4.20
168	169	3.713764	GGAATGGAGAGAATGAGAGGGAA	59.286	47.826	0.00	0.00	0.00	3.97
169	170	4.202346	GGAATGGAGAGAATGAGAGGGAAG	60.202	50.000	0.00	0.00	0.00	3.46
170	171	2.114616	TGGAGAGAATGAGAGGGAAGC	58.885	52.381	0.00	0.00	0.00	3.86
171	172	1.416030	GGAGAGAATGAGAGGGAAGCC	59.584	57.143	0.00	0.00	0.00	4.35
172	173	1.068434	GAGAGAATGAGAGGGAAGCCG	59.932	57.143	0.00	0.00	0.00	5.52
173	174	0.105778	GAGAATGAGAGGGAAGCCGG	59.894	60.000	0.00	0.00	0.00	6.13
174	175	1.147153	GAATGAGAGGGAAGCCGGG	59.853	63.158	2.18	0.00	0.00	5.73
175	176	2.330924	GAATGAGAGGGAAGCCGGGG	62.331	65.000	2.18	0.00	0.00	5.73
190	191	2.761160	GGGGGAAAGCGGGAAGAA	59.239	61.111	0.00	0.00	0.00	2.52
191	192	1.076014	GGGGGAAAGCGGGAAGAAA	59.924	57.895	0.00	0.00	0.00	2.52
192	193	1.248785	GGGGGAAAGCGGGAAGAAAC	61.249	60.000	0.00	0.00	0.00	2.78
193	194	1.583495	GGGGAAAGCGGGAAGAAACG	61.583	60.000	0.00	0.00	0.00	3.60
194	195	1.583495	GGGAAAGCGGGAAGAAACGG	61.583	60.000	0.00	0.00	0.00	4.44
195	196	1.209383	GAAAGCGGGAAGAAACGGC	59.791	57.895	0.00	0.00	34.78	5.68
196	197	2.508755	GAAAGCGGGAAGAAACGGCG	62.509	60.000	4.80	4.80	38.93	6.46
199	200	4.382320	CGGGAAGAAACGGCGGGA	62.382	66.667	13.24	0.00	0.00	5.14
200	201	2.032987	GGGAAGAAACGGCGGGAA	59.967	61.111	13.24	0.00	0.00	3.97
201	202	1.601477	GGGAAGAAACGGCGGGAAA	60.601	57.895	13.24	0.00	0.00	3.13
202	203	1.174078	GGGAAGAAACGGCGGGAAAA	61.174	55.000	13.24	0.00	0.00	2.29
203	204	0.240145	GGAAGAAACGGCGGGAAAAG	59.760	55.000	13.24	0.00	0.00	2.27
204	205	0.240145	GAAGAAACGGCGGGAAAAGG	59.760	55.000	13.24	0.00	0.00	3.11
205	206	1.802337	AAGAAACGGCGGGAAAAGGC	61.802	55.000	13.24	0.00	0.00	4.35
206	207	2.203437	AAACGGCGGGAAAAGGCT	60.203	55.556	13.24	0.00	0.00	4.58
207	208	2.196382	GAAACGGCGGGAAAAGGCTC	62.196	60.000	13.24	0.00	0.00	4.70
208	209	2.692273	AAACGGCGGGAAAAGGCTCT	62.692	55.000	13.24	0.00	0.00	4.09
209	210	2.820037	CGGCGGGAAAAGGCTCTC	60.820	66.667	0.00	0.00	0.00	3.20
210	211	2.351276	GGCGGGAAAAGGCTCTCA	59.649	61.111	0.00	0.00	0.00	3.27
211	212	1.303317	GGCGGGAAAAGGCTCTCAA	60.303	57.895	0.00	0.00	0.00	3.02
212	213	1.587043	GGCGGGAAAAGGCTCTCAAC	61.587	60.000	0.00	0.00	0.00	3.18
213	214	0.606673	GCGGGAAAAGGCTCTCAACT	60.607	55.000	0.00	0.00	0.00	3.16
214	215	1.443802	CGGGAAAAGGCTCTCAACTC	58.556	55.000	0.00	0.00	0.00	3.01
215	216	1.443802	GGGAAAAGGCTCTCAACTCG	58.556	55.000	0.00	0.00	0.00	4.18
216	217	0.799393	GGAAAAGGCTCTCAACTCGC	59.201	55.000	0.00	0.00	0.00	5.03
217	218	0.799393	GAAAAGGCTCTCAACTCGCC	59.201	55.000	0.00	0.00	44.09	5.54
220	221	2.507324	GGCTCTCAACTCGCCGAC	60.507	66.667	0.00	0.00	33.64	4.79
221	222	2.876645	GCTCTCAACTCGCCGACG	60.877	66.667	0.00	0.00	42.01	5.12
222	223	2.202492	CTCTCAACTCGCCGACGG	60.202	66.667	10.29	10.29	40.63	4.79
223	224	2.670592	TCTCAACTCGCCGACGGA	60.671	61.111	20.50	0.00	40.63	4.69
224	225	2.202492	CTCAACTCGCCGACGGAG	60.202	66.667	20.50	16.01	40.63	4.63
225	226	4.415332	TCAACTCGCCGACGGAGC	62.415	66.667	20.50	1.31	40.63	4.70
247	248	2.983592	CCACGCCCCTTTTCGCTT	60.984	61.111	0.00	0.00	0.00	4.68
248	249	2.255252	CACGCCCCTTTTCGCTTG	59.745	61.111	0.00	0.00	0.00	4.01
249	250	2.203294	ACGCCCCTTTTCGCTTGT	60.203	55.556	0.00	0.00	0.00	3.16
250	251	2.255252	CGCCCCTTTTCGCTTGTG	59.745	61.111	0.00	0.00	0.00	3.33
251	252	2.049156	GCCCCTTTTCGCTTGTGC	60.049	61.111	0.00	0.00	0.00	4.57
252	253	2.650778	CCCCTTTTCGCTTGTGCC	59.349	61.111	0.00	0.00	35.36	5.01
253	254	2.255252	CCCTTTTCGCTTGTGCCG	59.745	61.111	0.00	0.00	35.36	5.69
254	255	2.255252	CCTTTTCGCTTGTGCCGG	59.745	61.111	0.00	0.00	35.36	6.13
255	256	2.429069	CTTTTCGCTTGTGCCGGC	60.429	61.111	22.73	22.73	35.36	6.13
308	309	3.131478	GGTGCGCCGGCTGTTATT	61.131	61.111	26.68	0.00	40.82	1.40
309	310	2.696759	GGTGCGCCGGCTGTTATTT	61.697	57.895	26.68	0.00	40.82	1.40
310	311	1.211709	GTGCGCCGGCTGTTATTTT	59.788	52.632	26.68	0.00	40.82	1.82
311	312	1.070471	GTGCGCCGGCTGTTATTTTG	61.070	55.000	26.68	6.32	40.82	2.44
312	313	1.516169	GCGCCGGCTGTTATTTTGG	60.516	57.895	26.68	5.48	35.83	3.28
313	314	1.516169	CGCCGGCTGTTATTTTGGC	60.516	57.895	26.68	0.00	39.10	4.52
314	315	1.890174	GCCGGCTGTTATTTTGGCT	59.110	52.632	22.15	0.00	39.38	4.75
315	316	0.179137	GCCGGCTGTTATTTTGGCTC	60.179	55.000	22.15	0.00	39.38	4.70
316	317	1.173043	CCGGCTGTTATTTTGGCTCA	58.827	50.000	0.00	0.00	0.00	4.26
317	318	1.543802	CCGGCTGTTATTTTGGCTCAA	59.456	47.619	0.00	0.00	0.00	3.02
318	319	2.595386	CGGCTGTTATTTTGGCTCAAC	58.405	47.619	0.00	0.00	0.00	3.18
319	320	2.671070	CGGCTGTTATTTTGGCTCAACC	60.671	50.000	0.00	0.00	39.84	3.77
320	321	2.353704	GGCTGTTATTTTGGCTCAACCC	60.354	50.000	0.00	0.00	37.83	4.11
321	322	2.671070	GCTGTTATTTTGGCTCAACCCG	60.671	50.000	0.00	0.00	37.83	5.28
322	323	2.817258	CTGTTATTTTGGCTCAACCCGA	59.183	45.455	0.00	0.00	37.83	5.14
323	324	2.554893	TGTTATTTTGGCTCAACCCGAC	59.445	45.455	0.00	0.00	37.83	4.79
324	325	1.444836	TATTTTGGCTCAACCCGACG	58.555	50.000	0.00	0.00	37.83	5.12
325	326	0.250553	ATTTTGGCTCAACCCGACGA	60.251	50.000	0.00	0.00	37.83	4.20
326	327	0.464013	TTTTGGCTCAACCCGACGAA	60.464	50.000	0.00	0.00	37.83	3.85
327	328	0.464013	TTTGGCTCAACCCGACGAAA	60.464	50.000	0.00	0.00	37.83	3.46
328	329	0.464013	TTGGCTCAACCCGACGAAAA	60.464	50.000	0.00	0.00	37.83	2.29
329	330	0.464013	TGGCTCAACCCGACGAAAAA	60.464	50.000	0.00	0.00	37.83	1.94
330	331	0.040692	GGCTCAACCCGACGAAAAAC	60.041	55.000	0.00	0.00	0.00	2.43
342	343	1.803334	CGAAAAACGGACTCATGGGA	58.197	50.000	0.00	0.00	38.46	4.37
343	344	1.463444	CGAAAAACGGACTCATGGGAC	59.537	52.381	0.00	0.00	38.46	4.46
344	345	1.463444	GAAAAACGGACTCATGGGACG	59.537	52.381	0.00	6.21	0.00	4.79
345	346	0.953960	AAAACGGACTCATGGGACGC	60.954	55.000	12.95	0.00	0.00	5.19
346	347	3.642778	AACGGACTCATGGGACGCG	62.643	63.158	3.53	3.53	0.00	6.01
347	348	3.822192	CGGACTCATGGGACGCGA	61.822	66.667	15.93	0.00	0.00	5.87
348	349	2.202756	GGACTCATGGGACGCGAC	60.203	66.667	15.93	6.56	0.00	5.19
349	350	2.711922	GGACTCATGGGACGCGACT	61.712	63.158	15.93	0.00	0.00	4.18
350	351	1.517257	GACTCATGGGACGCGACTG	60.517	63.158	15.93	0.69	0.00	3.51
351	352	2.202797	CTCATGGGACGCGACTGG	60.203	66.667	15.93	0.00	0.00	4.00
352	353	3.723235	CTCATGGGACGCGACTGGG	62.723	68.421	15.93	0.00	0.00	4.45
358	359	4.814294	GACGCGACTGGGCCGATT	62.814	66.667	15.93	0.00	0.00	3.34
359	360	4.388499	ACGCGACTGGGCCGATTT	62.388	61.111	15.93	0.00	0.00	2.17
360	361	3.124921	CGCGACTGGGCCGATTTT	61.125	61.111	0.00	0.00	0.00	1.82
361	362	2.791927	GCGACTGGGCCGATTTTC	59.208	61.111	0.00	0.00	0.00	2.29
362	363	1.745489	GCGACTGGGCCGATTTTCT	60.745	57.895	0.00	0.00	0.00	2.52
363	364	1.305930	GCGACTGGGCCGATTTTCTT	61.306	55.000	0.00	0.00	0.00	2.52
364	365	0.727398	CGACTGGGCCGATTTTCTTC	59.273	55.000	0.00	0.00	0.00	2.87
365	366	1.095600	GACTGGGCCGATTTTCTTCC	58.904	55.000	0.00	0.00	0.00	3.46
366	367	0.676782	ACTGGGCCGATTTTCTTCCG	60.677	55.000	0.00	0.00	0.00	4.30
367	368	1.993369	CTGGGCCGATTTTCTTCCGC	61.993	60.000	0.00	0.00	0.00	5.54
368	369	2.771639	GGGCCGATTTTCTTCCGCC	61.772	63.158	0.00	0.00	38.72	6.13
369	370	2.403586	GCCGATTTTCTTCCGCCG	59.596	61.111	0.00	0.00	0.00	6.46
370	371	3.098555	CCGATTTTCTTCCGCCGG	58.901	61.111	0.00	0.00	0.00	6.13
371	372	2.403586	CGATTTTCTTCCGCCGGC	59.596	61.111	19.07	19.07	0.00	6.13
372	373	2.403586	GATTTTCTTCCGCCGGCG	59.596	61.111	41.00	41.00	39.44	6.46
373	374	2.359478	ATTTTCTTCCGCCGGCGT	60.359	55.556	43.12	22.89	37.81	5.68
374	375	1.918868	GATTTTCTTCCGCCGGCGTT	61.919	55.000	43.12	19.22	37.81	4.84
375	376	0.674269	ATTTTCTTCCGCCGGCGTTA	60.674	50.000	43.12	30.03	37.81	3.18
376	377	1.293267	TTTTCTTCCGCCGGCGTTAG	61.293	55.000	43.12	36.11	37.81	2.34
377	378	2.157305	TTTCTTCCGCCGGCGTTAGA	62.157	55.000	43.12	37.51	37.81	2.10
378	379	2.125832	CTTCCGCCGGCGTTAGAA	60.126	61.111	43.12	35.14	37.81	2.10
379	380	1.738830	CTTCCGCCGGCGTTAGAAA	60.739	57.895	43.12	26.95	37.81	2.52
380	381	1.293267	CTTCCGCCGGCGTTAGAAAA	61.293	55.000	43.12	25.36	37.81	2.29
381	382	0.883814	TTCCGCCGGCGTTAGAAAAA	60.884	50.000	43.12	22.99	37.81	1.94
382	383	1.154357	CCGCCGGCGTTAGAAAAAC	60.154	57.895	43.12	2.30	37.81	2.43
383	384	1.508332	CGCCGGCGTTAGAAAAACG	60.508	57.895	39.71	8.03	45.56	3.60
390	391	1.515081	CGTTAGAAAAACGCCTGGGA	58.485	50.000	0.00	0.00	36.82	4.37
391	392	1.463444	CGTTAGAAAAACGCCTGGGAG	59.537	52.381	0.00	0.00	36.82	4.30
392	393	1.810755	GTTAGAAAAACGCCTGGGAGG	59.189	52.381	0.00	0.00	38.80	4.30
393	394	0.326927	TAGAAAAACGCCTGGGAGGG	59.673	55.000	0.00	0.00	35.37	4.30
413	414	3.503363	GCGCGGCTGAAGATGCTT	61.503	61.111	8.83	0.00	0.00	3.91
414	415	3.044059	GCGCGGCTGAAGATGCTTT	62.044	57.895	8.83	0.00	0.00	3.51
415	416	1.503542	CGCGGCTGAAGATGCTTTT	59.496	52.632	0.00	0.00	0.00	2.27
416	417	0.726827	CGCGGCTGAAGATGCTTTTA	59.273	50.000	0.00	0.00	0.00	1.52
417	418	1.267732	CGCGGCTGAAGATGCTTTTAG	60.268	52.381	0.00	0.00	0.00	1.85
418	419	1.740025	GCGGCTGAAGATGCTTTTAGT	59.260	47.619	0.00	0.00	0.00	2.24
419	420	2.936498	GCGGCTGAAGATGCTTTTAGTA	59.064	45.455	0.00	0.00	0.00	1.82
420	421	3.001736	GCGGCTGAAGATGCTTTTAGTAG	59.998	47.826	0.00	0.00	0.00	2.57
421	422	3.557595	CGGCTGAAGATGCTTTTAGTAGG	59.442	47.826	0.00	0.00	0.00	3.18
422	423	4.680708	CGGCTGAAGATGCTTTTAGTAGGA	60.681	45.833	0.00	0.00	0.00	2.94
423	424	5.372373	GGCTGAAGATGCTTTTAGTAGGAT	58.628	41.667	0.00	0.00	0.00	3.24
424	425	5.238214	GGCTGAAGATGCTTTTAGTAGGATG	59.762	44.000	0.00	0.00	0.00	3.51
425	426	6.051717	GCTGAAGATGCTTTTAGTAGGATGA	58.948	40.000	0.00	0.00	0.00	2.92
426	427	6.540189	GCTGAAGATGCTTTTAGTAGGATGAA	59.460	38.462	0.00	0.00	0.00	2.57
427	428	7.466590	GCTGAAGATGCTTTTAGTAGGATGAAC	60.467	40.741	0.00	0.00	0.00	3.18
428	429	7.624549	TGAAGATGCTTTTAGTAGGATGAACT	58.375	34.615	0.00	0.00	0.00	3.01
429	430	8.758829	TGAAGATGCTTTTAGTAGGATGAACTA	58.241	33.333	0.00	0.00	0.00	2.24
430	431	9.771534	GAAGATGCTTTTAGTAGGATGAACTAT	57.228	33.333	0.00	0.00	29.86	2.12
435	436	9.832445	TGCTTTTAGTAGGATGAACTATTTAGG	57.168	33.333	0.00	0.00	29.86	2.69
436	437	9.833917	GCTTTTAGTAGGATGAACTATTTAGGT	57.166	33.333	0.00	0.00	29.86	3.08
483	484	5.001232	TCCTCAGGGAAAAATAGTCAAACG	58.999	41.667	0.00	0.00	38.93	3.60
543	544	1.151668	CTGAACTCCTGGACGCAAAG	58.848	55.000	0.00	0.00	0.00	2.77
588	590	2.025898	GGTGGAAAAGAACCGGAACAA	58.974	47.619	9.46	0.00	0.00	2.83
632	634	8.121086	TCGATCTCGTTTTCATTAGTAGTAGTG	58.879	37.037	0.00	0.00	40.80	2.74
679	681	5.123820	CACACAAATTAAGCCAGCTAGCTAA	59.876	40.000	18.86	8.24	44.11	3.09
686	688	1.463674	GCCAGCTAGCTAAGGCAAAA	58.536	50.000	31.28	0.00	46.26	2.44
687	689	2.027385	GCCAGCTAGCTAAGGCAAAAT	58.973	47.619	31.28	0.81	46.26	1.82
688	690	2.223665	GCCAGCTAGCTAAGGCAAAATG	60.224	50.000	31.28	12.47	46.26	2.32
689	691	3.282021	CCAGCTAGCTAAGGCAAAATGA	58.718	45.455	18.86	0.00	41.70	2.57
690	692	3.696051	CCAGCTAGCTAAGGCAAAATGAA	59.304	43.478	18.86	0.00	41.70	2.57
691	693	4.439289	CCAGCTAGCTAAGGCAAAATGAAC	60.439	45.833	18.86	0.00	41.70	3.18
692	694	3.375299	AGCTAGCTAAGGCAAAATGAACG	59.625	43.478	17.69	0.00	41.70	3.95
693	695	3.374058	GCTAGCTAAGGCAAAATGAACGA	59.626	43.478	7.70	0.00	41.70	3.85
694	696	4.142687	GCTAGCTAAGGCAAAATGAACGAA	60.143	41.667	7.70	0.00	41.70	3.85
697	699	2.415697	AAGGCAAAATGAACGAACGG	57.584	45.000	0.00	0.00	0.00	4.44
708	711	2.614983	TGAACGAACGGAAAGGGAAAAG	59.385	45.455	0.00	0.00	0.00	2.27
777	780	8.578151	AGTAAAGAAAACAGAGTACAGGAGTAG	58.422	37.037	0.00	0.00	0.00	2.57
778	781	6.980416	AAGAAAACAGAGTACAGGAGTAGT	57.020	37.500	0.00	0.00	36.60	2.73
779	782	8.474710	AAAGAAAACAGAGTACAGGAGTAGTA	57.525	34.615	0.00	0.00	34.06	1.82
915	925	1.621992	TTCATAAACAAGCGGGGCAA	58.378	45.000	0.00	0.00	0.00	4.52
940	950	4.152647	AGAGATTGAGAGGTGTGTGTGTA	58.847	43.478	0.00	0.00	0.00	2.90
944	954	5.480422	AGATTGAGAGGTGTGTGTGTATGTA	59.520	40.000	0.00	0.00	0.00	2.29
1236	1263	0.106719	ATTCTACAATGGCCGGGTGG	60.107	55.000	2.18	0.00	38.77	4.61
1237	1264	1.493854	TTCTACAATGGCCGGGTGGT	61.494	55.000	2.18	0.00	37.67	4.16
1290	2419	1.227674	CTGCCCCGATCCTTAGCAC	60.228	63.158	0.00	0.00	0.00	4.40
1321	2450	2.421725	TGCTCCATCCCTCCATGTATT	58.578	47.619	0.00	0.00	0.00	1.89
1323	2452	3.205056	TGCTCCATCCCTCCATGTATTTT	59.795	43.478	0.00	0.00	0.00	1.82
1324	2453	3.571401	GCTCCATCCCTCCATGTATTTTG	59.429	47.826	0.00	0.00	0.00	2.44
1325	2454	4.796606	CTCCATCCCTCCATGTATTTTGT	58.203	43.478	0.00	0.00	0.00	2.83
1326	2455	5.690097	GCTCCATCCCTCCATGTATTTTGTA	60.690	44.000	0.00	0.00	0.00	2.41
1327	2456	6.529084	TCCATCCCTCCATGTATTTTGTAT	57.471	37.500	0.00	0.00	0.00	2.29
1328	2457	6.306199	TCCATCCCTCCATGTATTTTGTATG	58.694	40.000	0.00	0.00	0.00	2.39
1329	2458	6.070656	CCATCCCTCCATGTATTTTGTATGT	58.929	40.000	0.00	0.00	0.00	2.29
1330	2459	6.550854	CCATCCCTCCATGTATTTTGTATGTT	59.449	38.462	0.00	0.00	0.00	2.71
1331	2460	7.069826	CCATCCCTCCATGTATTTTGTATGTTT	59.930	37.037	0.00	0.00	0.00	2.83
1332	2461	9.130661	CATCCCTCCATGTATTTTGTATGTTTA	57.869	33.333	0.00	0.00	0.00	2.01
1333	2462	8.514330	TCCCTCCATGTATTTTGTATGTTTAC	57.486	34.615	0.00	0.00	0.00	2.01
1334	2463	7.281324	TCCCTCCATGTATTTTGTATGTTTACG	59.719	37.037	0.00	0.00	0.00	3.18
1335	2464	6.910433	CCTCCATGTATTTTGTATGTTTACGC	59.090	38.462	0.00	0.00	0.00	4.42
1336	2465	7.379098	TCCATGTATTTTGTATGTTTACGCA	57.621	32.000	0.00	0.00	0.00	5.24
1337	2466	7.468441	TCCATGTATTTTGTATGTTTACGCAG	58.532	34.615	0.00	0.00	0.00	5.18
1365	2494	5.844004	ACCCTAAGTAGTTAATCATGCTCG	58.156	41.667	0.00	0.00	0.00	5.03
1366	2495	5.363005	ACCCTAAGTAGTTAATCATGCTCGT	59.637	40.000	0.00	0.00	0.00	4.18
1420	2557	3.692576	CATGTGCTTAGCTCAATCTTGC	58.307	45.455	12.98	0.00	35.71	4.01
1521	2662	9.562583	TTTAATGTAAACGATGCCAAGAAATAC	57.437	29.630	0.00	0.00	0.00	1.89
1524	2665	6.375377	TGTAAACGATGCCAAGAAATACAAC	58.625	36.000	0.00	0.00	0.00	3.32
1596	2749	1.882623	CAAGGGAGCGCTTCTTCTTTT	59.117	47.619	16.97	0.06	0.00	2.27
1602	2755	1.464997	AGCGCTTCTTCTTTTAAGCCG	59.535	47.619	2.64	0.00	44.17	5.52
1609	2762	5.432885	TTCTTCTTTTAAGCCGGTCTTTG	57.567	39.130	14.87	5.72	36.25	2.77
1654	2810	1.695893	GCTATGCACGCATGACACGT	61.696	55.000	14.70	0.00	46.42	4.49
1655	2811	0.298707	CTATGCACGCATGACACGTC	59.701	55.000	14.70	0.00	42.96	4.34
1656	2812	0.108851	TATGCACGCATGACACGTCT	60.109	50.000	14.70	0.00	42.96	4.18
1657	2813	0.950555	ATGCACGCATGACACGTCTT	60.951	50.000	3.17	0.00	42.96	3.01
1658	2814	1.154599	GCACGCATGACACGTCTTG	60.155	57.895	0.00	8.33	42.96	3.02
1659	2815	1.492873	CACGCATGACACGTCTTGG	59.507	57.895	13.16	7.31	42.96	3.61
1660	2816	1.667830	ACGCATGACACGTCTTGGG	60.668	57.895	21.15	21.15	46.15	4.12
1661	2817	1.374125	CGCATGACACGTCTTGGGA	60.374	57.895	19.24	0.00	44.70	4.37
1662	2818	1.354337	CGCATGACACGTCTTGGGAG	61.354	60.000	19.24	0.00	44.70	4.30
1663	2819	1.639298	GCATGACACGTCTTGGGAGC	61.639	60.000	13.16	0.00	35.88	4.70
1664	2820	1.021390	CATGACACGTCTTGGGAGCC	61.021	60.000	5.40	0.00	32.89	4.70
1665	2821	1.194781	ATGACACGTCTTGGGAGCCT	61.195	55.000	0.00	0.00	0.00	4.58
1666	2822	1.374758	GACACGTCTTGGGAGCCTG	60.375	63.158	0.00	0.00	0.00	4.85
1667	2823	2.100879	GACACGTCTTGGGAGCCTGT	62.101	60.000	0.00	0.00	0.00	4.00
1668	2824	0.830444	ACACGTCTTGGGAGCCTGTA	60.830	55.000	0.00	0.00	0.00	2.74
1669	2825	0.108615	CACGTCTTGGGAGCCTGTAG	60.109	60.000	0.00	0.00	0.00	2.74
1677	2833	1.248785	GGGAGCCTGTAGACGTGTGA	61.249	60.000	0.00	0.00	0.00	3.58
1694	2850	5.010719	ACGTGTGAGAACCTAGAAGATGAAA	59.989	40.000	0.00	0.00	0.00	2.69
1697	2853	7.759886	CGTGTGAGAACCTAGAAGATGAAAATA	59.240	37.037	0.00	0.00	0.00	1.40
1698	2854	9.436957	GTGTGAGAACCTAGAAGATGAAAATAA	57.563	33.333	0.00	0.00	0.00	1.40
1727	2883	4.081406	TGAGACACCCAAATCAATTCCAG	58.919	43.478	0.00	0.00	0.00	3.86
1744	2900	1.089920	CAGAGATCAAACTTGGGCGG	58.910	55.000	0.00	0.00	0.00	6.13
1745	2901	0.035056	AGAGATCAAACTTGGGCGGG	60.035	55.000	0.00	0.00	0.00	6.13
1746	2902	1.657751	GAGATCAAACTTGGGCGGGC	61.658	60.000	0.00	0.00	0.00	6.13
1747	2903	1.678970	GATCAAACTTGGGCGGGCT	60.679	57.895	0.26	0.00	0.00	5.19
1748	2904	1.937546	GATCAAACTTGGGCGGGCTG	61.938	60.000	0.26	0.00	0.00	4.85
1749	2905	3.683937	CAAACTTGGGCGGGCTGG	61.684	66.667	0.26	0.00	0.00	4.85
1750	2906	4.994756	AAACTTGGGCGGGCTGGG	62.995	66.667	0.26	0.00	0.00	4.45
1774	2930	3.609853	GCTACCACCACATCATTTCTGA	58.390	45.455	0.00	0.00	35.41	3.27
1775	2931	4.202441	GCTACCACCACATCATTTCTGAT	58.798	43.478	0.00	0.00	43.02	2.90
1796	2952	9.661954	TCTGATTAATTATTACTCCCTCTGTCT	57.338	33.333	0.90	0.00	0.00	3.41
1797	2953	9.921637	CTGATTAATTATTACTCCCTCTGTCTC	57.078	37.037	0.90	0.00	0.00	3.36
1798	2954	9.434275	TGATTAATTATTACTCCCTCTGTCTCA	57.566	33.333	0.90	0.00	0.00	3.27
1799	2955	9.699703	GATTAATTATTACTCCCTCTGTCTCAC	57.300	37.037	0.00	0.00	0.00	3.51
1800	2956	8.603898	TTAATTATTACTCCCTCTGTCTCACA	57.396	34.615	0.00	0.00	0.00	3.58
1801	2957	7.496346	AATTATTACTCCCTCTGTCTCACAA	57.504	36.000	0.00	0.00	0.00	3.33
1802	2958	7.682787	ATTATTACTCCCTCTGTCTCACAAT	57.317	36.000	0.00	0.00	0.00	2.71
1803	2959	8.783660	ATTATTACTCCCTCTGTCTCACAATA	57.216	34.615	0.00	0.00	0.00	1.90
1804	2960	8.783660	TTATTACTCCCTCTGTCTCACAATAT	57.216	34.615	0.00	0.00	0.00	1.28
1805	2961	9.877222	TTATTACTCCCTCTGTCTCACAATATA	57.123	33.333	0.00	0.00	0.00	0.86
1806	2962	8.783660	ATTACTCCCTCTGTCTCACAATATAA	57.216	34.615	0.00	0.00	0.00	0.98
1807	2963	6.723298	ACTCCCTCTGTCTCACAATATAAG	57.277	41.667	0.00	0.00	0.00	1.73
1808	2964	6.436027	ACTCCCTCTGTCTCACAATATAAGA	58.564	40.000	0.00	0.00	0.00	2.10
1809	2965	6.322712	ACTCCCTCTGTCTCACAATATAAGAC	59.677	42.308	0.00	0.00	39.87	3.01
1810	2966	5.299531	TCCCTCTGTCTCACAATATAAGACG	59.700	44.000	0.00	0.00	41.84	4.18
1811	2967	5.067936	CCCTCTGTCTCACAATATAAGACGT	59.932	44.000	0.00	0.00	41.84	4.34
1812	2968	6.405953	CCCTCTGTCTCACAATATAAGACGTT	60.406	42.308	0.00	0.00	41.84	3.99
1813	2969	7.036220	CCTCTGTCTCACAATATAAGACGTTT	58.964	38.462	0.00	0.00	41.84	3.60
1814	2970	7.545965	CCTCTGTCTCACAATATAAGACGTTTT	59.454	37.037	0.00	0.00	41.84	2.43
1815	2971	8.827177	TCTGTCTCACAATATAAGACGTTTTT	57.173	30.769	0.00	0.00	41.84	1.94
1816	2972	8.922676	TCTGTCTCACAATATAAGACGTTTTTC	58.077	33.333	0.00	0.00	41.84	2.29
1817	2973	8.025243	TGTCTCACAATATAAGACGTTTTTCC	57.975	34.615	0.00	0.00	41.84	3.13
1818	2974	7.658167	TGTCTCACAATATAAGACGTTTTTCCA	59.342	33.333	0.00	0.00	41.84	3.53
1819	2975	8.500773	GTCTCACAATATAAGACGTTTTTCCAA	58.499	33.333	0.00	0.00	31.01	3.53
1820	2976	8.717821	TCTCACAATATAAGACGTTTTTCCAAG	58.282	33.333	0.00	0.00	0.00	3.61
1821	2977	7.302524	TCACAATATAAGACGTTTTTCCAAGC	58.697	34.615	0.00	0.00	0.00	4.01
1822	2978	7.174253	TCACAATATAAGACGTTTTTCCAAGCT	59.826	33.333	0.00	0.00	0.00	3.74
1823	2979	8.447833	CACAATATAAGACGTTTTTCCAAGCTA	58.552	33.333	0.00	0.00	0.00	3.32
1824	2980	9.174166	ACAATATAAGACGTTTTTCCAAGCTAT	57.826	29.630	0.00	0.00	0.00	2.97
1825	2981	9.438291	CAATATAAGACGTTTTTCCAAGCTATG	57.562	33.333	0.00	0.00	0.00	2.23
1826	2982	8.732746	ATATAAGACGTTTTTCCAAGCTATGT	57.267	30.769	0.00	0.00	0.00	2.29
1827	2983	5.767816	AAGACGTTTTTCCAAGCTATGTT	57.232	34.783	0.00	0.00	0.00	2.71
1828	2984	6.870971	AAGACGTTTTTCCAAGCTATGTTA	57.129	33.333	0.00	0.00	0.00	2.41
1829	2985	6.481954	AGACGTTTTTCCAAGCTATGTTAG	57.518	37.500	0.00	0.00	0.00	2.34
1844	3000	6.747659	CTATGTTAGCTTGCAAAAACGTTT	57.252	33.333	7.96	7.96	0.00	3.60
1845	3001	7.160633	CTATGTTAGCTTGCAAAAACGTTTT	57.839	32.000	20.26	20.26	0.00	2.43
1846	3002	8.276060	CTATGTTAGCTTGCAAAAACGTTTTA	57.724	30.769	25.44	8.61	0.00	1.52
1847	3003	7.707774	ATGTTAGCTTGCAAAAACGTTTTAT	57.292	28.000	25.44	13.37	0.00	1.40
1848	3004	8.804688	ATGTTAGCTTGCAAAAACGTTTTATA	57.195	26.923	25.44	12.54	0.00	0.98
1849	3005	8.804688	TGTTAGCTTGCAAAAACGTTTTATAT	57.195	26.923	25.44	8.61	0.00	0.86
1850	3006	9.250624	TGTTAGCTTGCAAAAACGTTTTATATT	57.749	25.926	25.44	8.23	0.00	1.28
1854	3010	8.868916	AGCTTGCAAAAACGTTTTATATTATGG	58.131	29.630	25.44	12.27	0.00	2.74
1855	3011	8.113675	GCTTGCAAAAACGTTTTATATTATGGG	58.886	33.333	25.44	11.15	0.00	4.00
1856	3012	9.360093	CTTGCAAAAACGTTTTATATTATGGGA	57.640	29.630	25.44	7.48	0.00	4.37
1857	3013	8.690680	TGCAAAAACGTTTTATATTATGGGAC	57.309	30.769	25.44	8.00	0.00	4.46
1858	3014	7.485277	TGCAAAAACGTTTTATATTATGGGACG	59.515	33.333	25.44	0.00	35.39	4.79
1859	3015	7.043920	GCAAAAACGTTTTATATTATGGGACGG	60.044	37.037	25.44	0.00	33.74	4.79
1860	3016	7.862512	AAAACGTTTTATATTATGGGACGGA	57.137	32.000	24.13	0.00	33.74	4.69
1861	3017	7.486802	AAACGTTTTATATTATGGGACGGAG	57.513	36.000	7.96	0.00	33.74	4.63
1862	3018	5.544650	ACGTTTTATATTATGGGACGGAGG	58.455	41.667	0.00	0.00	33.74	4.30
1863	3019	4.933400	CGTTTTATATTATGGGACGGAGGG	59.067	45.833	0.00	0.00	0.00	4.30
1864	3020	5.279607	CGTTTTATATTATGGGACGGAGGGA	60.280	44.000	0.00	0.00	0.00	4.20
1865	3021	6.171213	GTTTTATATTATGGGACGGAGGGAG	58.829	44.000	0.00	0.00	0.00	4.30
1866	3022	3.562108	ATATTATGGGACGGAGGGAGT	57.438	47.619	0.00	0.00	0.00	3.85
1957	3115	2.148916	TTCAGCACGTCGATGAGTTT	57.851	45.000	12.58	0.00	0.00	2.66
2045	3212	7.061094	GGTCAAAATTCTTGTGCTTATTTCGAG	59.939	37.037	0.00	0.00	0.00	4.04
2058	3225	0.386352	TTTCGAGACGTGCTGTACCG	60.386	55.000	0.00	0.00	0.00	4.02
2146	3316	1.134521	TGACAAGCACGTTCAACTCCT	60.135	47.619	0.00	0.00	0.00	3.69
2147	3317	1.527311	GACAAGCACGTTCAACTCCTC	59.473	52.381	0.00	0.00	0.00	3.71
2148	3318	0.868406	CAAGCACGTTCAACTCCTCC	59.132	55.000	0.00	0.00	0.00	4.30
2152	3322	0.320771	CACGTTCAACTCCTCCCCAG	60.321	60.000	0.00	0.00	0.00	4.45
2236	3410	4.003648	AGCAATTAGTCAGAAAAGGGACG	58.996	43.478	0.00	0.00	39.01	4.79
2282	3456	4.142902	CCAGAATTAAACACGTGCTCGATT	60.143	41.667	17.22	11.19	40.62	3.34
2292	3466	3.863681	TGCTCGATTGCACCAAAAC	57.136	47.368	0.00	0.00	38.12	2.43
2445	3621	0.597568	TGGCGAGCCAACAAATTCTG	59.402	50.000	15.24	0.00	44.12	3.02
2509	3685	0.807667	GGCACAGTACGGAGCTCATG	60.808	60.000	17.19	9.93	0.00	3.07
2551	3727	1.080569	CAACGTTGGGCTCCATTGC	60.081	57.895	20.71	0.00	31.53	3.56
2563	3739	0.537143	TCCATTGCTGGCTTCACGTT	60.537	50.000	0.00	0.00	42.80	3.99
2648	3824	4.430423	GAAGCGGTCGTTGCAGCG	62.430	66.667	17.58	17.58	40.29	5.18
2729	3905	2.505982	GGCGATGCCTTCCTAGCA	59.494	61.111	0.00	0.00	46.69	3.49
2747	3923	1.883209	GCACTAGGCCGGTGGTTAAAA	60.883	52.381	25.45	0.00	36.11	1.52
2756	3932	3.316029	GCCGGTGGTTAAAAACACTTACT	59.684	43.478	10.50	0.00	37.72	2.24
2757	3933	4.514816	GCCGGTGGTTAAAAACACTTACTA	59.485	41.667	10.50	0.00	37.72	1.82
2758	3934	5.560760	GCCGGTGGTTAAAAACACTTACTAC	60.561	44.000	10.50	0.00	37.72	2.73
2838	4017	7.428826	AGATTGGAGTGTTCAAATGAAGTTTC	58.571	34.615	0.00	0.00	34.27	2.78
2839	4018	6.522625	TTGGAGTGTTCAAATGAAGTTTCA	57.477	33.333	0.00	0.00	42.14	2.69
2855	4035	5.169836	AGTTTCATTTGTTCGAGTGTTCC	57.830	39.130	0.00	0.00	0.00	3.62
2867	4047	3.374367	TCGAGTGTTCCGTAGAAGATGAG	59.626	47.826	0.00	0.00	30.91	2.90
2870	4050	3.833070	AGTGTTCCGTAGAAGATGAGGTT	59.167	43.478	0.00	0.00	30.91	3.50
2872	4052	4.389077	GTGTTCCGTAGAAGATGAGGTTTG	59.611	45.833	0.00	0.00	30.91	2.93
2876	4056	2.644676	GTAGAAGATGAGGTTTGGGCC	58.355	52.381	0.00	0.00	0.00	5.80
2909	4090	1.019673	GCATTGATCGGTGCATCAGT	58.980	50.000	14.99	0.00	40.94	3.41
2979	4160	1.148498	GAATTAGGAGGTGGGCCCG	59.852	63.158	19.37	0.00	38.74	6.13
2997	4193	5.003804	GGCCCGAGACACAATATATTCAAT	58.996	41.667	0.00	0.00	0.00	2.57
3000	4196	6.874134	GCCCGAGACACAATATATTCAATACT	59.126	38.462	0.00	0.00	0.00	2.12
3002	4200	8.307483	CCCGAGACACAATATATTCAATACTCT	58.693	37.037	0.00	0.00	0.00	3.24
3009	4208	6.874134	ACAATATATTCAATACTCTCCCGCAC	59.126	38.462	0.00	0.00	0.00	5.34
3045	4244	0.455295	GACGCAGAGACTGGAACGAG	60.455	60.000	0.00	0.00	31.21	4.18
3051	4250	1.074084	AGAGACTGGAACGAGACTCCA	59.926	52.381	10.94	0.00	40.77	3.86
3119	4318	2.279810	TGCGGTCGGAACATGGAGA	61.280	57.895	0.00	0.00	0.00	3.71
3121	4320	1.084370	GCGGTCGGAACATGGAGAAG	61.084	60.000	0.00	0.00	0.00	2.85
3128	4327	2.369394	GGAACATGGAGAAGCCGAATT	58.631	47.619	0.00	0.00	40.66	2.17
3142	4341	0.748005	CGAATTCGTCCAAGGGCCAT	60.748	55.000	19.67	0.00	34.11	4.40
3152	4352	2.596851	AAGGGCCATCTGCTCACGT	61.597	57.895	6.18	0.00	45.81	4.49
3215	4415	3.122727	AACGGGGTTGGCGGAAAGA	62.123	57.895	0.00	0.00	0.00	2.52
3260	4460	1.079336	GACAACCGTAGCCTGGGAC	60.079	63.158	0.00	0.00	0.00	4.46
3497	4698	2.182827	CCATCTCCAGAGAAGTGGACA	58.817	52.381	10.57	0.00	41.99	4.02
3498	4699	2.770802	CCATCTCCAGAGAAGTGGACAT	59.229	50.000	10.57	0.00	41.99	3.06
3499	4700	3.199508	CCATCTCCAGAGAAGTGGACATT	59.800	47.826	10.57	0.00	41.99	2.71
3626	4830	1.341209	CAGCATACTGTAGATCCGGCA	59.659	52.381	0.00	0.00	39.22	5.69
3640	4844	2.985456	GGCAGGGTGAGAGTCAGG	59.015	66.667	0.00	0.00	0.00	3.86
3754	4958	1.542915	GTAGCGACAGGGTGACAGTTA	59.457	52.381	0.00	0.00	0.00	2.24

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	3.086309	CGGTGGTCGGCGTTAATG	58.914	61.111	6.85	0.00	34.75	1.90
19	20	3.322318	AAGCAGAGGAAGCCGAGGC	62.322	63.158	5.89	5.89	42.33	4.70
20	21	1.153469	GAAGCAGAGGAAGCCGAGG	60.153	63.158	0.00	0.00	0.00	4.63
21	22	1.518133	CGAAGCAGAGGAAGCCGAG	60.518	63.158	0.00	0.00	0.00	4.63
22	23	2.573869	CGAAGCAGAGGAAGCCGA	59.426	61.111	0.00	0.00	0.00	5.54
23	24	2.510238	CCGAAGCAGAGGAAGCCG	60.510	66.667	0.00	0.00	0.00	5.52
24	25	2.821810	GCCGAAGCAGAGGAAGCC	60.822	66.667	0.00	0.00	39.53	4.35
25	26	2.105466	CAGCCGAAGCAGAGGAAGC	61.105	63.158	0.00	0.00	43.56	3.86
26	27	1.449246	CCAGCCGAAGCAGAGGAAG	60.449	63.158	0.00	0.00	43.56	3.46
27	28	2.665000	CCAGCCGAAGCAGAGGAA	59.335	61.111	0.00	0.00	43.56	3.36
28	29	3.393970	CCCAGCCGAAGCAGAGGA	61.394	66.667	0.00	0.00	43.56	3.71
75	76	4.078516	AAGTACGTGCTCCCCCGC	62.079	66.667	6.63	0.00	0.00	6.13
76	77	1.885163	AAGAAGTACGTGCTCCCCCG	61.885	60.000	6.63	0.00	0.00	5.73
77	78	0.108281	GAAGAAGTACGTGCTCCCCC	60.108	60.000	6.63	0.00	0.00	5.40
78	79	0.458025	CGAAGAAGTACGTGCTCCCC	60.458	60.000	6.63	0.00	0.00	4.81
79	80	0.458025	CCGAAGAAGTACGTGCTCCC	60.458	60.000	6.63	2.17	0.00	4.30
80	81	1.077089	GCCGAAGAAGTACGTGCTCC	61.077	60.000	6.63	0.00	0.00	4.70
81	82	1.403972	CGCCGAAGAAGTACGTGCTC	61.404	60.000	6.63	0.77	0.00	4.26
82	83	1.443872	CGCCGAAGAAGTACGTGCT	60.444	57.895	0.00	0.00	0.00	4.40
83	84	2.442188	CCGCCGAAGAAGTACGTGC	61.442	63.158	0.00	0.00	0.00	5.34
84	85	2.442188	GCCGCCGAAGAAGTACGTG	61.442	63.158	0.00	0.00	0.00	4.49
85	86	2.126189	GCCGCCGAAGAAGTACGT	60.126	61.111	0.00	0.00	0.00	3.57
86	87	1.518572	ATGCCGCCGAAGAAGTACG	60.519	57.895	0.00	0.00	0.00	3.67
87	88	1.429148	CCATGCCGCCGAAGAAGTAC	61.429	60.000	0.00	0.00	0.00	2.73
88	89	1.153449	CCATGCCGCCGAAGAAGTA	60.153	57.895	0.00	0.00	0.00	2.24
89	90	2.436646	CCATGCCGCCGAAGAAGT	60.437	61.111	0.00	0.00	0.00	3.01
90	91	3.880846	GCCATGCCGCCGAAGAAG	61.881	66.667	0.00	0.00	0.00	2.85
113	114	4.095400	TCCTCCTCCCCTCCCAGC	62.095	72.222	0.00	0.00	0.00	4.85
114	115	2.285180	CTCCTCCTCCCCTCCCAG	59.715	72.222	0.00	0.00	0.00	4.45
115	116	3.368501	CCTCCTCCTCCCCTCCCA	61.369	72.222	0.00	0.00	0.00	4.37
116	117	4.179599	CCCTCCTCCTCCCCTCCC	62.180	77.778	0.00	0.00	0.00	4.30
117	118	3.036959	TCCCTCCTCCTCCCCTCC	61.037	72.222	0.00	0.00	0.00	4.30
118	119	1.376249	ATCTCCCTCCTCCTCCCCTC	61.376	65.000	0.00	0.00	0.00	4.30
119	120	0.938926	AATCTCCCTCCTCCTCCCCT	60.939	60.000	0.00	0.00	0.00	4.79
120	121	0.766288	CAATCTCCCTCCTCCTCCCC	60.766	65.000	0.00	0.00	0.00	4.81
121	122	0.766288	CCAATCTCCCTCCTCCTCCC	60.766	65.000	0.00	0.00	0.00	4.30
122	123	1.414866	GCCAATCTCCCTCCTCCTCC	61.415	65.000	0.00	0.00	0.00	4.30
123	124	1.753368	CGCCAATCTCCCTCCTCCTC	61.753	65.000	0.00	0.00	0.00	3.71
124	125	1.764054	CGCCAATCTCCCTCCTCCT	60.764	63.158	0.00	0.00	0.00	3.69
125	126	2.812619	CCGCCAATCTCCCTCCTCC	61.813	68.421	0.00	0.00	0.00	4.30
126	127	2.812619	CCCGCCAATCTCCCTCCTC	61.813	68.421	0.00	0.00	0.00	3.71
127	128	2.770048	CCCGCCAATCTCCCTCCT	60.770	66.667	0.00	0.00	0.00	3.69
128	129	2.768344	TCCCGCCAATCTCCCTCC	60.768	66.667	0.00	0.00	0.00	4.30
129	130	2.812619	CCTCCCGCCAATCTCCCTC	61.813	68.421	0.00	0.00	0.00	4.30
130	131	2.770048	CCTCCCGCCAATCTCCCT	60.770	66.667	0.00	0.00	0.00	4.20
131	132	1.709994	ATTCCTCCCGCCAATCTCCC	61.710	60.000	0.00	0.00	0.00	4.30
132	133	0.536006	CATTCCTCCCGCCAATCTCC	60.536	60.000	0.00	0.00	0.00	3.71
133	134	0.536006	CCATTCCTCCCGCCAATCTC	60.536	60.000	0.00	0.00	0.00	2.75
134	135	0.988145	TCCATTCCTCCCGCCAATCT	60.988	55.000	0.00	0.00	0.00	2.40
135	136	0.536006	CTCCATTCCTCCCGCCAATC	60.536	60.000	0.00	0.00	0.00	2.67
136	137	0.988145	TCTCCATTCCTCCCGCCAAT	60.988	55.000	0.00	0.00	0.00	3.16
137	138	1.615124	TCTCCATTCCTCCCGCCAA	60.615	57.895	0.00	0.00	0.00	4.52
138	139	2.040442	TCTCCATTCCTCCCGCCA	59.960	61.111	0.00	0.00	0.00	5.69
139	140	1.338136	TTCTCTCCATTCCTCCCGCC	61.338	60.000	0.00	0.00	0.00	6.13
140	141	0.761802	ATTCTCTCCATTCCTCCCGC	59.238	55.000	0.00	0.00	0.00	6.13
141	142	2.036992	CTCATTCTCTCCATTCCTCCCG	59.963	54.545	0.00	0.00	0.00	5.14
142	143	3.312890	TCTCATTCTCTCCATTCCTCCC	58.687	50.000	0.00	0.00	0.00	4.30
143	144	3.324556	CCTCTCATTCTCTCCATTCCTCC	59.675	52.174	0.00	0.00	0.00	4.30
144	145	3.324556	CCCTCTCATTCTCTCCATTCCTC	59.675	52.174	0.00	0.00	0.00	3.71
145	146	3.051496	TCCCTCTCATTCTCTCCATTCCT	60.051	47.826	0.00	0.00	0.00	3.36
146	147	3.312890	TCCCTCTCATTCTCTCCATTCC	58.687	50.000	0.00	0.00	0.00	3.01
147	148	4.743348	GCTTCCCTCTCATTCTCTCCATTC	60.743	50.000	0.00	0.00	0.00	2.67
148	149	3.136260	GCTTCCCTCTCATTCTCTCCATT	59.864	47.826	0.00	0.00	0.00	3.16
149	150	2.705127	GCTTCCCTCTCATTCTCTCCAT	59.295	50.000	0.00	0.00	0.00	3.41
150	151	2.114616	GCTTCCCTCTCATTCTCTCCA	58.885	52.381	0.00	0.00	0.00	3.86
151	152	1.416030	GGCTTCCCTCTCATTCTCTCC	59.584	57.143	0.00	0.00	0.00	3.71
152	153	1.068434	CGGCTTCCCTCTCATTCTCTC	59.932	57.143	0.00	0.00	0.00	3.20
153	154	1.118838	CGGCTTCCCTCTCATTCTCT	58.881	55.000	0.00	0.00	0.00	3.10
154	155	0.105778	CCGGCTTCCCTCTCATTCTC	59.894	60.000	0.00	0.00	0.00	2.87
155	156	1.341156	CCCGGCTTCCCTCTCATTCT	61.341	60.000	0.00	0.00	0.00	2.40
156	157	1.147153	CCCGGCTTCCCTCTCATTC	59.853	63.158	0.00	0.00	0.00	2.67
157	158	2.378634	CCCCGGCTTCCCTCTCATT	61.379	63.158	0.00	0.00	0.00	2.57
158	159	2.770048	CCCCGGCTTCCCTCTCAT	60.770	66.667	0.00	0.00	0.00	2.90
173	174	1.076014	TTTCTTCCCGCTTTCCCCC	59.924	57.895	0.00	0.00	0.00	5.40
174	175	1.583495	CGTTTCTTCCCGCTTTCCCC	61.583	60.000	0.00	0.00	0.00	4.81
175	176	1.583495	CCGTTTCTTCCCGCTTTCCC	61.583	60.000	0.00	0.00	0.00	3.97
176	177	1.873863	CCGTTTCTTCCCGCTTTCC	59.126	57.895	0.00	0.00	0.00	3.13
177	178	1.209383	GCCGTTTCTTCCCGCTTTC	59.791	57.895	0.00	0.00	0.00	2.62
178	179	2.613506	CGCCGTTTCTTCCCGCTTT	61.614	57.895	0.00	0.00	0.00	3.51
179	180	3.047877	CGCCGTTTCTTCCCGCTT	61.048	61.111	0.00	0.00	0.00	4.68
182	183	3.887335	TTCCCGCCGTTTCTTCCCG	62.887	63.158	0.00	0.00	0.00	5.14
183	184	1.174078	TTTTCCCGCCGTTTCTTCCC	61.174	55.000	0.00	0.00	0.00	3.97
184	185	0.240145	CTTTTCCCGCCGTTTCTTCC	59.760	55.000	0.00	0.00	0.00	3.46
185	186	0.240145	CCTTTTCCCGCCGTTTCTTC	59.760	55.000	0.00	0.00	0.00	2.87
186	187	1.802337	GCCTTTTCCCGCCGTTTCTT	61.802	55.000	0.00	0.00	0.00	2.52
187	188	2.265904	GCCTTTTCCCGCCGTTTCT	61.266	57.895	0.00	0.00	0.00	2.52
188	189	2.196382	GAGCCTTTTCCCGCCGTTTC	62.196	60.000	0.00	0.00	0.00	2.78
189	190	2.203437	AGCCTTTTCCCGCCGTTT	60.203	55.556	0.00	0.00	0.00	3.60
190	191	2.671963	GAGCCTTTTCCCGCCGTT	60.672	61.111	0.00	0.00	0.00	4.44
191	192	3.607370	GAGAGCCTTTTCCCGCCGT	62.607	63.158	0.00	0.00	0.00	5.68
192	193	2.820037	GAGAGCCTTTTCCCGCCG	60.820	66.667	0.00	0.00	0.00	6.46
193	194	1.303317	TTGAGAGCCTTTTCCCGCC	60.303	57.895	0.00	0.00	0.00	6.13
194	195	0.606673	AGTTGAGAGCCTTTTCCCGC	60.607	55.000	0.00	0.00	0.00	6.13
195	196	1.443802	GAGTTGAGAGCCTTTTCCCG	58.556	55.000	0.00	0.00	0.00	5.14
196	197	1.443802	CGAGTTGAGAGCCTTTTCCC	58.556	55.000	0.00	0.00	0.00	3.97
197	198	0.799393	GCGAGTTGAGAGCCTTTTCC	59.201	55.000	0.00	0.00	0.00	3.13
198	199	0.799393	GGCGAGTTGAGAGCCTTTTC	59.201	55.000	0.00	0.00	46.83	2.29
199	200	2.934083	GGCGAGTTGAGAGCCTTTT	58.066	52.632	0.00	0.00	46.83	2.27
200	201	4.703703	GGCGAGTTGAGAGCCTTT	57.296	55.556	0.00	0.00	46.83	3.11
203	204	2.507324	GTCGGCGAGTTGAGAGCC	60.507	66.667	11.20	0.00	46.88	4.70
204	205	2.876645	CGTCGGCGAGTTGAGAGC	60.877	66.667	11.20	0.00	41.33	4.09
205	206	2.202492	CCGTCGGCGAGTTGAGAG	60.202	66.667	12.93	0.00	41.33	3.20
206	207	2.670592	TCCGTCGGCGAGTTGAGA	60.671	61.111	12.93	0.00	41.33	3.27
207	208	2.202492	CTCCGTCGGCGAGTTGAG	60.202	66.667	12.93	12.75	41.33	3.02
208	209	4.415332	GCTCCGTCGGCGAGTTGA	62.415	66.667	12.93	6.29	41.33	3.18
230	231	2.983592	AAGCGAAAAGGGGCGTGG	60.984	61.111	0.00	0.00	0.00	4.94
231	232	2.255252	CAAGCGAAAAGGGGCGTG	59.745	61.111	0.00	0.00	32.72	5.34
232	233	2.203294	ACAAGCGAAAAGGGGCGT	60.203	55.556	0.00	0.00	0.00	5.68
233	234	2.255252	CACAAGCGAAAAGGGGCG	59.745	61.111	0.00	0.00	0.00	6.13
234	235	2.049156	GCACAAGCGAAAAGGGGC	60.049	61.111	0.00	0.00	0.00	5.80
235	236	2.650778	GGCACAAGCGAAAAGGGG	59.349	61.111	0.00	0.00	43.41	4.79
236	237	2.255252	CGGCACAAGCGAAAAGGG	59.745	61.111	0.00	0.00	43.41	3.95
237	238	2.255252	CCGGCACAAGCGAAAAGG	59.745	61.111	0.00	0.00	43.41	3.11
238	239	2.429069	GCCGGCACAAGCGAAAAG	60.429	61.111	24.80	0.00	43.41	2.27
291	292	2.207788	AAAATAACAGCCGGCGCACC	62.208	55.000	23.20	0.00	37.52	5.01
292	293	1.070471	CAAAATAACAGCCGGCGCAC	61.070	55.000	23.20	0.00	37.52	5.34
293	294	1.211449	CAAAATAACAGCCGGCGCA	59.789	52.632	23.20	7.87	37.52	6.09
294	295	1.516169	CCAAAATAACAGCCGGCGC	60.516	57.895	23.20	0.00	0.00	6.53
295	296	1.516169	GCCAAAATAACAGCCGGCG	60.516	57.895	23.20	18.60	0.00	6.46
296	297	0.179137	GAGCCAAAATAACAGCCGGC	60.179	55.000	21.89	21.89	39.90	6.13
297	298	1.173043	TGAGCCAAAATAACAGCCGG	58.827	50.000	0.00	0.00	0.00	6.13
298	299	2.595386	GTTGAGCCAAAATAACAGCCG	58.405	47.619	0.00	0.00	0.00	5.52
299	300	2.353704	GGGTTGAGCCAAAATAACAGCC	60.354	50.000	0.00	0.00	39.65	4.85
300	301	2.671070	CGGGTTGAGCCAAAATAACAGC	60.671	50.000	0.00	0.00	39.65	4.40
301	302	2.817258	TCGGGTTGAGCCAAAATAACAG	59.183	45.455	0.00	0.00	39.65	3.16
302	303	2.554893	GTCGGGTTGAGCCAAAATAACA	59.445	45.455	0.00	0.00	39.65	2.41
303	304	2.413634	CGTCGGGTTGAGCCAAAATAAC	60.414	50.000	0.00	0.00	39.65	1.89
304	305	1.807742	CGTCGGGTTGAGCCAAAATAA	59.192	47.619	0.00	0.00	39.65	1.40
305	306	1.002201	TCGTCGGGTTGAGCCAAAATA	59.998	47.619	0.00	0.00	39.65	1.40
306	307	0.250553	TCGTCGGGTTGAGCCAAAAT	60.251	50.000	0.00	0.00	39.65	1.82
307	308	0.464013	TTCGTCGGGTTGAGCCAAAA	60.464	50.000	0.00	0.00	39.65	2.44
308	309	0.464013	TTTCGTCGGGTTGAGCCAAA	60.464	50.000	0.00	0.00	39.65	3.28
309	310	0.464013	TTTTCGTCGGGTTGAGCCAA	60.464	50.000	0.00	0.00	39.65	4.52
310	311	0.464013	TTTTTCGTCGGGTTGAGCCA	60.464	50.000	0.00	0.00	39.65	4.75
311	312	0.040692	GTTTTTCGTCGGGTTGAGCC	60.041	55.000	0.00	0.00	0.00	4.70
312	313	0.383860	CGTTTTTCGTCGGGTTGAGC	60.384	55.000	0.00	0.00	34.52	4.26
313	314	0.233848	CCGTTTTTCGTCGGGTTGAG	59.766	55.000	0.00	0.00	42.61	3.02
314	315	0.179089	TCCGTTTTTCGTCGGGTTGA	60.179	50.000	3.85	0.00	45.79	3.18
315	316	0.041926	GTCCGTTTTTCGTCGGGTTG	60.042	55.000	3.85	0.00	45.79	3.77
316	317	0.179076	AGTCCGTTTTTCGTCGGGTT	60.179	50.000	3.85	0.00	45.79	4.11
317	318	0.598419	GAGTCCGTTTTTCGTCGGGT	60.598	55.000	3.85	0.00	45.79	5.28
318	319	0.598158	TGAGTCCGTTTTTCGTCGGG	60.598	55.000	3.85	0.00	45.79	5.14
319	320	1.126113	CATGAGTCCGTTTTTCGTCGG	59.874	52.381	0.00	0.00	46.93	4.79
320	321	1.126113	CCATGAGTCCGTTTTTCGTCG	59.874	52.381	0.00	0.00	37.94	5.12
321	322	1.463444	CCCATGAGTCCGTTTTTCGTC	59.537	52.381	0.00	0.00	37.94	4.20
322	323	1.071071	TCCCATGAGTCCGTTTTTCGT	59.929	47.619	0.00	0.00	37.94	3.85
323	324	1.463444	GTCCCATGAGTCCGTTTTTCG	59.537	52.381	0.00	0.00	39.52	3.46
324	325	1.463444	CGTCCCATGAGTCCGTTTTTC	59.537	52.381	0.00	0.00	0.00	2.29
325	326	1.519408	CGTCCCATGAGTCCGTTTTT	58.481	50.000	0.00	0.00	0.00	1.94
326	327	0.953960	GCGTCCCATGAGTCCGTTTT	60.954	55.000	0.00	0.00	0.00	2.43
327	328	1.375523	GCGTCCCATGAGTCCGTTT	60.376	57.895	0.00	0.00	0.00	3.60
328	329	2.264794	GCGTCCCATGAGTCCGTT	59.735	61.111	0.00	0.00	0.00	4.44
329	330	4.129737	CGCGTCCCATGAGTCCGT	62.130	66.667	0.00	0.00	0.00	4.69
330	331	3.822192	TCGCGTCCCATGAGTCCG	61.822	66.667	5.77	0.00	0.00	4.79
331	332	2.202756	GTCGCGTCCCATGAGTCC	60.203	66.667	5.77	0.00	0.00	3.85
332	333	1.517257	CAGTCGCGTCCCATGAGTC	60.517	63.158	5.77	0.00	0.00	3.36
333	334	2.573869	CAGTCGCGTCCCATGAGT	59.426	61.111	5.77	0.00	0.00	3.41
334	335	2.202797	CCAGTCGCGTCCCATGAG	60.203	66.667	5.77	0.00	0.00	2.90
335	336	3.770040	CCCAGTCGCGTCCCATGA	61.770	66.667	5.77	0.00	0.00	3.07
341	342	4.814294	AATCGGCCCAGTCGCGTC	62.814	66.667	5.77	0.00	0.00	5.19
342	343	3.894547	AAAATCGGCCCAGTCGCGT	62.895	57.895	5.77	0.00	0.00	6.01
343	344	3.095898	GAAAATCGGCCCAGTCGCG	62.096	63.158	0.00	0.00	0.00	5.87
344	345	1.305930	AAGAAAATCGGCCCAGTCGC	61.306	55.000	0.00	0.00	0.00	5.19
345	346	0.727398	GAAGAAAATCGGCCCAGTCG	59.273	55.000	0.00	0.00	0.00	4.18
346	347	1.095600	GGAAGAAAATCGGCCCAGTC	58.904	55.000	0.00	0.00	0.00	3.51
347	348	0.676782	CGGAAGAAAATCGGCCCAGT	60.677	55.000	0.00	0.00	0.00	4.00
348	349	1.993369	GCGGAAGAAAATCGGCCCAG	61.993	60.000	0.00	0.00	39.10	4.45
349	350	2.043980	GCGGAAGAAAATCGGCCCA	61.044	57.895	0.00	0.00	39.10	5.36
350	351	2.798689	GCGGAAGAAAATCGGCCC	59.201	61.111	0.00	0.00	39.10	5.80
352	353	2.403586	CGGCGGAAGAAAATCGGC	59.596	61.111	0.00	0.00	42.87	5.54
353	354	3.098555	CCGGCGGAAGAAAATCGG	58.901	61.111	24.41	0.00	0.00	4.18
354	355	2.403586	GCCGGCGGAAGAAAATCG	59.596	61.111	33.44	0.00	0.00	3.34
355	356	2.403586	CGCCGGCGGAAGAAAATC	59.596	61.111	40.50	8.12	35.56	2.17
365	366	1.508332	CGTTTTTCTAACGCCGGCG	60.508	57.895	44.88	44.88	46.03	6.46
366	367	4.427793	CGTTTTTCTAACGCCGGC	57.572	55.556	19.07	19.07	36.82	6.13
371	372	1.463444	CTCCCAGGCGTTTTTCTAACG	59.537	52.381	5.74	5.74	45.56	3.18
372	373	1.810755	CCTCCCAGGCGTTTTTCTAAC	59.189	52.381	0.00	0.00	0.00	2.34
373	374	1.271707	CCCTCCCAGGCGTTTTTCTAA	60.272	52.381	0.00	0.00	32.73	2.10
374	375	0.326927	CCCTCCCAGGCGTTTTTCTA	59.673	55.000	0.00	0.00	32.73	2.10
375	376	1.074951	CCCTCCCAGGCGTTTTTCT	59.925	57.895	0.00	0.00	32.73	2.52
376	377	1.977009	CCCCTCCCAGGCGTTTTTC	60.977	63.158	0.00	0.00	32.73	2.29
377	378	2.117423	CCCCTCCCAGGCGTTTTT	59.883	61.111	0.00	0.00	32.73	1.94
378	379	3.979497	CCCCCTCCCAGGCGTTTT	61.979	66.667	0.00	0.00	32.73	2.43
396	397	2.533391	AAAAGCATCTTCAGCCGCGC	62.533	55.000	0.00	0.00	0.00	6.86
397	398	0.726827	TAAAAGCATCTTCAGCCGCG	59.273	50.000	0.00	0.00	0.00	6.46
398	399	1.740025	ACTAAAAGCATCTTCAGCCGC	59.260	47.619	0.00	0.00	0.00	6.53
399	400	3.557595	CCTACTAAAAGCATCTTCAGCCG	59.442	47.826	0.00	0.00	0.00	5.52
400	401	4.770795	TCCTACTAAAAGCATCTTCAGCC	58.229	43.478	0.00	0.00	0.00	4.85
401	402	6.051717	TCATCCTACTAAAAGCATCTTCAGC	58.948	40.000	0.00	0.00	0.00	4.26
402	403	7.768120	AGTTCATCCTACTAAAAGCATCTTCAG	59.232	37.037	0.00	0.00	0.00	3.02
403	404	7.624549	AGTTCATCCTACTAAAAGCATCTTCA	58.375	34.615	0.00	0.00	0.00	3.02
404	405	9.771534	ATAGTTCATCCTACTAAAAGCATCTTC	57.228	33.333	0.00	0.00	32.28	2.87
409	410	9.832445	CCTAAATAGTTCATCCTACTAAAAGCA	57.168	33.333	0.00	0.00	32.28	3.91
410	411	9.833917	ACCTAAATAGTTCATCCTACTAAAAGC	57.166	33.333	0.00	0.00	32.28	3.51
442	443	9.413734	CCCTGAGGAATTCAATTAACTAAATCT	57.586	33.333	7.93	0.00	34.81	2.40
443	444	9.408648	TCCCTGAGGAATTCAATTAACTAAATC	57.591	33.333	7.93	0.00	40.08	2.17
460	461	5.001232	CGTTTGACTATTTTTCCCTGAGGA	58.999	41.667	0.00	0.00	41.88	3.71
466	467	3.504520	TCAGCCGTTTGACTATTTTTCCC	59.495	43.478	0.00	0.00	0.00	3.97
483	484	6.481644	CCAGATTTACACTCTTCTATTCAGCC	59.518	42.308	0.00	0.00	0.00	4.85
543	544	2.954611	GGCACGTGCTCTTTTCCC	59.045	61.111	36.84	16.30	41.70	3.97
588	590	5.356190	AGATCGATCATTGCTTTGACATGTT	59.644	36.000	26.47	0.00	0.00	2.71
679	681	1.600023	TCCGTTCGTTCATTTTGCCT	58.400	45.000	0.00	0.00	0.00	4.75
686	688	2.554370	TTCCCTTTCCGTTCGTTCAT	57.446	45.000	0.00	0.00	0.00	2.57
687	689	2.328819	TTTCCCTTTCCGTTCGTTCA	57.671	45.000	0.00	0.00	0.00	3.18
688	690	2.031420	CCTTTTCCCTTTCCGTTCGTTC	60.031	50.000	0.00	0.00	0.00	3.95
689	691	1.951602	CCTTTTCCCTTTCCGTTCGTT	59.048	47.619	0.00	0.00	0.00	3.85
690	692	1.141455	TCCTTTTCCCTTTCCGTTCGT	59.859	47.619	0.00	0.00	0.00	3.85
691	693	1.886886	TCCTTTTCCCTTTCCGTTCG	58.113	50.000	0.00	0.00	0.00	3.95
692	694	2.492088	CCATCCTTTTCCCTTTCCGTTC	59.508	50.000	0.00	0.00	0.00	3.95
693	695	2.525368	CCATCCTTTTCCCTTTCCGTT	58.475	47.619	0.00	0.00	0.00	4.44
694	696	1.891011	GCCATCCTTTTCCCTTTCCGT	60.891	52.381	0.00	0.00	0.00	4.69
697	699	3.165071	TCTTGCCATCCTTTTCCCTTTC	58.835	45.455	0.00	0.00	0.00	2.62
708	711	1.669795	CGCTTGGTTTTCTTGCCATCC	60.670	52.381	0.00	0.00	34.37	3.51
777	780	2.434359	GCCGGCTGTCCTGTGTAC	60.434	66.667	22.15	0.00	0.00	2.90
778	781	4.063967	CGCCGGCTGTCCTGTGTA	62.064	66.667	26.68	0.00	0.00	2.90
839	849	3.304726	CGGTCTCTTCTTTTCTTTTGCCC	60.305	47.826	0.00	0.00	0.00	5.36
915	925	3.900601	ACACACACCTCTCAATCTCTCTT	59.099	43.478	0.00	0.00	0.00	2.85
940	950	5.007682	GGTTTGGCCCGTCAATATATACAT	58.992	41.667	0.00	0.00	0.00	2.29
965	975	0.242286	CGAGACCAGATATCGGCCTG	59.758	60.000	0.00	0.00	38.41	4.85
967	977	0.241481	GACGAGACCAGATATCGGCC	59.759	60.000	11.89	0.00	44.71	6.13
968	978	3.777016	GACGAGACCAGATATCGGC	57.223	57.895	11.89	6.68	46.50	5.54
969	979	4.066490	AGTTAGACGAGACCAGATATCGG	58.934	47.826	10.77	10.77	46.50	4.18
1112	1124	4.489771	CCCCCATCTCGCCACCAC	62.490	72.222	0.00	0.00	0.00	4.16
1113	1125	4.731853	TCCCCCATCTCGCCACCA	62.732	66.667	0.00	0.00	0.00	4.17
1290	2419	5.453762	GGAGGGATGGAGCAAATTAAAATGG	60.454	44.000	0.00	0.00	0.00	3.16
1321	2450	5.505985	GGGTTGAACTGCGTAAACATACAAA	60.506	40.000	0.00	0.00	0.00	2.83
1323	2452	3.499157	GGGTTGAACTGCGTAAACATACA	59.501	43.478	0.00	0.00	0.00	2.29
1324	2453	3.749609	AGGGTTGAACTGCGTAAACATAC	59.250	43.478	0.00	0.00	0.00	2.39
1325	2454	4.010667	AGGGTTGAACTGCGTAAACATA	57.989	40.909	0.00	0.00	0.00	2.29
1326	2455	2.858745	AGGGTTGAACTGCGTAAACAT	58.141	42.857	0.00	0.00	0.00	2.71
1327	2456	2.335316	AGGGTTGAACTGCGTAAACA	57.665	45.000	0.00	0.00	0.00	2.83
1328	2457	3.811497	ACTTAGGGTTGAACTGCGTAAAC	59.189	43.478	0.00	0.00	0.00	2.01
1329	2458	4.075963	ACTTAGGGTTGAACTGCGTAAA	57.924	40.909	0.00	0.00	0.00	2.01
1330	2459	3.756933	ACTTAGGGTTGAACTGCGTAA	57.243	42.857	0.00	0.00	0.00	3.18
1331	2460	3.828451	ACTACTTAGGGTTGAACTGCGTA	59.172	43.478	0.00	0.00	0.00	4.42
1332	2461	2.631545	ACTACTTAGGGTTGAACTGCGT	59.368	45.455	0.00	0.00	0.00	5.24
1333	2462	3.314541	ACTACTTAGGGTTGAACTGCG	57.685	47.619	0.00	0.00	0.00	5.18
1334	2463	6.877322	TGATTAACTACTTAGGGTTGAACTGC	59.123	38.462	0.00	0.00	0.00	4.40
1335	2464	8.883731	CATGATTAACTACTTAGGGTTGAACTG	58.116	37.037	0.00	0.00	0.00	3.16
1336	2465	7.553044	GCATGATTAACTACTTAGGGTTGAACT	59.447	37.037	0.00	0.00	0.00	3.01
1337	2466	7.553044	AGCATGATTAACTACTTAGGGTTGAAC	59.447	37.037	0.00	0.00	0.00	3.18
1365	2494	4.951094	AGTGATGACCAACCTAGTCTAGAC	59.049	45.833	15.41	15.41	35.21	2.59
1366	2495	4.950475	CAGTGATGACCAACCTAGTCTAGA	59.050	45.833	8.56	0.00	35.21	2.43
1420	2557	7.918643	ACATTGTTTTGCCTTTTAATCACTTG	58.081	30.769	0.00	0.00	0.00	3.16
1473	2614	1.135257	TGCAAAAACAACTCGTGGTGG	60.135	47.619	7.52	0.00	0.00	4.61
1521	2662	1.068588	TGTCTCAGTTGACTCCGGTTG	59.931	52.381	0.00	0.00	37.79	3.77
1524	2665	0.038159	GGTGTCTCAGTTGACTCCGG	60.038	60.000	0.00	0.00	39.68	5.14
1596	2749	0.475044	ACAACCCAAAGACCGGCTTA	59.525	50.000	0.00	0.00	35.24	3.09
1602	2755	3.486383	TGAGAATCACAACCCAAAGACC	58.514	45.455	0.00	0.00	42.56	3.85
1654	2810	0.251653	ACGTCTACAGGCTCCCAAGA	60.252	55.000	0.00	0.00	0.00	3.02
1655	2811	0.108615	CACGTCTACAGGCTCCCAAG	60.109	60.000	0.00	0.00	0.00	3.61
1656	2812	0.830444	ACACGTCTACAGGCTCCCAA	60.830	55.000	0.00	0.00	0.00	4.12
1657	2813	1.228769	ACACGTCTACAGGCTCCCA	60.229	57.895	0.00	0.00	0.00	4.37
1658	2814	1.215647	CACACGTCTACAGGCTCCC	59.784	63.158	0.00	0.00	0.00	4.30
1659	2815	0.171455	CTCACACGTCTACAGGCTCC	59.829	60.000	0.00	0.00	0.00	4.70
1660	2816	1.166129	TCTCACACGTCTACAGGCTC	58.834	55.000	0.00	0.00	0.00	4.70
1661	2817	1.269998	GTTCTCACACGTCTACAGGCT	59.730	52.381	0.00	0.00	0.00	4.58
1662	2818	1.669211	GGTTCTCACACGTCTACAGGC	60.669	57.143	0.00	0.00	0.00	4.85
1663	2819	1.887198	AGGTTCTCACACGTCTACAGG	59.113	52.381	0.00	0.00	0.00	4.00
1664	2820	4.001652	TCTAGGTTCTCACACGTCTACAG	58.998	47.826	0.00	0.00	0.00	2.74
1665	2821	4.011966	TCTAGGTTCTCACACGTCTACA	57.988	45.455	0.00	0.00	0.00	2.74
1666	2822	4.694509	TCTTCTAGGTTCTCACACGTCTAC	59.305	45.833	0.00	0.00	0.00	2.59
1667	2823	4.903054	TCTTCTAGGTTCTCACACGTCTA	58.097	43.478	0.00	0.00	0.00	2.59
1668	2824	3.752665	TCTTCTAGGTTCTCACACGTCT	58.247	45.455	0.00	0.00	0.00	4.18
1669	2825	4.156190	TCATCTTCTAGGTTCTCACACGTC	59.844	45.833	0.00	0.00	0.00	4.34
1677	2833	7.928873	TGGGTTATTTTCATCTTCTAGGTTCT	58.071	34.615	0.00	0.00	0.00	3.01
1722	2878	2.795329	GCCCAAGTTTGATCTCTGGAA	58.205	47.619	0.00	0.00	0.00	3.53
1727	2883	1.657751	GCCCGCCCAAGTTTGATCTC	61.658	60.000	0.00	0.00	0.00	2.75
1751	2907	2.308570	AGAAATGATGTGGTGGTAGCCA	59.691	45.455	0.00	0.00	35.93	4.75
1752	2908	2.684881	CAGAAATGATGTGGTGGTAGCC	59.315	50.000	0.00	0.00	0.00	3.93
1753	2909	3.609853	TCAGAAATGATGTGGTGGTAGC	58.390	45.455	0.00	0.00	0.00	3.58
1774	2930	9.213777	TGTGAGACAGAGGGAGTAATAATTAAT	57.786	33.333	0.00	0.00	0.00	1.40
1775	2931	8.603898	TGTGAGACAGAGGGAGTAATAATTAA	57.396	34.615	0.00	0.00	0.00	1.40
1784	2940	6.322712	GTCTTATATTGTGAGACAGAGGGAGT	59.677	42.308	1.22	0.00	41.69	3.85
1785	2941	6.514212	CGTCTTATATTGTGAGACAGAGGGAG	60.514	46.154	6.24	0.00	42.06	4.30
1786	2942	5.299531	CGTCTTATATTGTGAGACAGAGGGA	59.700	44.000	6.24	0.00	42.06	4.20
1787	2943	5.067936	ACGTCTTATATTGTGAGACAGAGGG	59.932	44.000	6.24	0.00	42.06	4.30
1788	2944	6.137794	ACGTCTTATATTGTGAGACAGAGG	57.862	41.667	6.24	0.00	42.06	3.69
1789	2945	8.467402	AAAACGTCTTATATTGTGAGACAGAG	57.533	34.615	6.24	0.00	42.06	3.35
1790	2946	8.827177	AAAAACGTCTTATATTGTGAGACAGA	57.173	30.769	6.24	0.00	42.06	3.41
1791	2947	8.169268	GGAAAAACGTCTTATATTGTGAGACAG	58.831	37.037	6.24	2.42	42.06	3.51
1792	2948	7.658167	TGGAAAAACGTCTTATATTGTGAGACA	59.342	33.333	6.24	0.00	42.06	3.41
1793	2949	8.025243	TGGAAAAACGTCTTATATTGTGAGAC	57.975	34.615	0.00	0.00	39.42	3.36
1794	2950	8.610248	TTGGAAAAACGTCTTATATTGTGAGA	57.390	30.769	0.00	0.00	0.00	3.27
1795	2951	7.481798	GCTTGGAAAAACGTCTTATATTGTGAG	59.518	37.037	0.00	0.00	0.00	3.51
1796	2952	7.174253	AGCTTGGAAAAACGTCTTATATTGTGA	59.826	33.333	0.00	0.00	0.00	3.58
1797	2953	7.305474	AGCTTGGAAAAACGTCTTATATTGTG	58.695	34.615	0.00	0.00	0.00	3.33
1798	2954	7.448748	AGCTTGGAAAAACGTCTTATATTGT	57.551	32.000	0.00	0.00	0.00	2.71
1799	2955	9.438291	CATAGCTTGGAAAAACGTCTTATATTG	57.562	33.333	0.00	0.00	0.00	1.90
1800	2956	9.174166	ACATAGCTTGGAAAAACGTCTTATATT	57.826	29.630	0.00	0.00	0.00	1.28
1801	2957	8.732746	ACATAGCTTGGAAAAACGTCTTATAT	57.267	30.769	0.00	0.00	0.00	0.86
1802	2958	8.556213	AACATAGCTTGGAAAAACGTCTTATA	57.444	30.769	0.00	0.00	0.00	0.98
1803	2959	7.448748	AACATAGCTTGGAAAAACGTCTTAT	57.551	32.000	0.00	0.00	0.00	1.73
1804	2960	6.870971	AACATAGCTTGGAAAAACGTCTTA	57.129	33.333	0.00	0.00	0.00	2.10
1805	2961	5.767816	AACATAGCTTGGAAAAACGTCTT	57.232	34.783	0.00	0.00	0.00	3.01
1806	2962	6.481954	CTAACATAGCTTGGAAAAACGTCT	57.518	37.500	0.00	0.00	0.00	4.18
1821	2977	6.747659	AAACGTTTTTGCAAGCTAACATAG	57.252	33.333	7.96	7.17	0.00	2.23
1822	2978	8.804688	ATAAAACGTTTTTGCAAGCTAACATA	57.195	26.923	29.42	8.41	0.00	2.29
1823	2979	7.707774	ATAAAACGTTTTTGCAAGCTAACAT	57.292	28.000	29.42	10.87	0.00	2.71
1824	2980	8.804688	ATATAAAACGTTTTTGCAAGCTAACA	57.195	26.923	29.42	9.03	0.00	2.41
1828	2984	8.868916	CCATAATATAAAACGTTTTTGCAAGCT	58.131	29.630	29.42	7.18	0.00	3.74
1829	2985	8.113675	CCCATAATATAAAACGTTTTTGCAAGC	58.886	33.333	29.42	0.00	0.00	4.01
1830	2986	9.360093	TCCCATAATATAAAACGTTTTTGCAAG	57.640	29.630	29.42	14.18	0.00	4.01
1831	2987	9.141400	GTCCCATAATATAAAACGTTTTTGCAA	57.859	29.630	29.42	13.49	0.00	4.08
1832	2988	7.485277	CGTCCCATAATATAAAACGTTTTTGCA	59.515	33.333	29.42	13.85	0.00	4.08
1833	2989	7.043920	CCGTCCCATAATATAAAACGTTTTTGC	60.044	37.037	29.42	8.69	0.00	3.68
1834	2990	8.182881	TCCGTCCCATAATATAAAACGTTTTTG	58.817	33.333	29.42	19.75	0.00	2.44
1835	2991	8.278729	TCCGTCCCATAATATAAAACGTTTTT	57.721	30.769	29.42	19.03	0.00	1.94
1836	2992	7.012610	CCTCCGTCCCATAATATAAAACGTTTT	59.987	37.037	27.65	27.65	0.00	2.43
1837	2993	6.484308	CCTCCGTCCCATAATATAAAACGTTT	59.516	38.462	7.96	7.96	0.00	3.60
1838	2994	5.993441	CCTCCGTCCCATAATATAAAACGTT	59.007	40.000	0.00	0.00	0.00	3.99
1839	2995	5.511888	CCCTCCGTCCCATAATATAAAACGT	60.512	44.000	0.00	0.00	0.00	3.99
1840	2996	4.933400	CCCTCCGTCCCATAATATAAAACG	59.067	45.833	0.00	0.00	0.00	3.60
1841	2997	6.117975	TCCCTCCGTCCCATAATATAAAAC	57.882	41.667	0.00	0.00	0.00	2.43
1842	2998	5.847817	ACTCCCTCCGTCCCATAATATAAAA	59.152	40.000	0.00	0.00	0.00	1.52
1843	2999	5.408824	ACTCCCTCCGTCCCATAATATAAA	58.591	41.667	0.00	0.00	0.00	1.40
1844	3000	5.019657	ACTCCCTCCGTCCCATAATATAA	57.980	43.478	0.00	0.00	0.00	0.98
1845	3001	4.687262	ACTCCCTCCGTCCCATAATATA	57.313	45.455	0.00	0.00	0.00	0.86
1846	3002	3.562108	ACTCCCTCCGTCCCATAATAT	57.438	47.619	0.00	0.00	0.00	1.28
1847	3003	4.687262	ATACTCCCTCCGTCCCATAATA	57.313	45.455	0.00	0.00	0.00	0.98
1848	3004	3.562108	ATACTCCCTCCGTCCCATAAT	57.438	47.619	0.00	0.00	0.00	1.28
1849	3005	4.474303	TTATACTCCCTCCGTCCCATAA	57.526	45.455	0.00	0.00	0.00	1.90
1850	3006	4.687262	ATTATACTCCCTCCGTCCCATA	57.313	45.455	0.00	0.00	0.00	2.74
1851	3007	3.562108	ATTATACTCCCTCCGTCCCAT	57.438	47.619	0.00	0.00	0.00	4.00
1852	3008	3.659195	TCTATTATACTCCCTCCGTCCCA	59.341	47.826	0.00	0.00	0.00	4.37
1853	3009	4.313020	TCTATTATACTCCCTCCGTCCC	57.687	50.000	0.00	0.00	0.00	4.46
1854	3010	5.507637	TGATCTATTATACTCCCTCCGTCC	58.492	45.833	0.00	0.00	0.00	4.79
1855	3011	7.177041	ACTTTGATCTATTATACTCCCTCCGTC	59.823	40.741	0.00	0.00	0.00	4.79
1856	3012	7.011382	ACTTTGATCTATTATACTCCCTCCGT	58.989	38.462	0.00	0.00	0.00	4.69
1857	3013	7.363094	GGACTTTGATCTATTATACTCCCTCCG	60.363	44.444	0.00	0.00	0.00	4.63
1858	3014	7.676468	AGGACTTTGATCTATTATACTCCCTCC	59.324	40.741	0.00	0.00	0.00	4.30
1859	3015	8.658840	AGGACTTTGATCTATTATACTCCCTC	57.341	38.462	0.00	0.00	0.00	4.30
1860	3016	9.453830	AAAGGACTTTGATCTATTATACTCCCT	57.546	33.333	0.00	0.00	0.00	4.20
2016	3183	4.326504	AAGCACAAGAATTTTGACCCAG	57.673	40.909	7.18	0.00	0.00	4.45
2058	3225	0.322816	TTTGCCTGTCTCCTGGATGC	60.323	55.000	0.00	0.00	31.55	3.91
2146	3316	1.455773	AGATGATCGCGTCTGGGGA	60.456	57.895	5.77	0.00	38.92	4.81
2147	3317	1.006805	GAGATGATCGCGTCTGGGG	60.007	63.158	5.77	0.00	40.42	4.96
2148	3318	0.387202	AAGAGATGATCGCGTCTGGG	59.613	55.000	5.77	0.00	40.42	4.45
2152	3322	3.248841	TCTGACTAAGAGATGATCGCGTC	59.751	47.826	5.77	3.66	0.00	5.19
2236	3410	5.297029	GGTTGTCTATTTTGTATGGAGGCTC	59.703	44.000	5.78	5.78	0.00	4.70
2282	3456	6.147492	GCATAATCATTTTGAGTTTTGGTGCA	59.853	34.615	0.00	0.00	0.00	4.57
2396	3572	1.459450	TTCCCTTGCCTGCGATTAAC	58.541	50.000	0.00	0.00	0.00	2.01
2445	3621	2.125753	CTGTCCTGCTGCTCGGTC	60.126	66.667	0.00	0.25	0.00	4.79
2498	3674	1.489481	TGGATTCTCATGAGCTCCGT	58.511	50.000	26.24	10.60	34.61	4.69
2509	3685	1.821332	CCGGCTGGCTTGGATTCTC	60.821	63.158	0.00	0.00	0.00	2.87
2551	3727	1.493311	GAAGCGAACGTGAAGCCAG	59.507	57.895	6.55	0.00	0.00	4.85
2563	3739	2.989253	TGCTCCCTGACGAAGCGA	60.989	61.111	0.00	0.00	38.90	4.93
2648	3824	0.519077	CTTCCGCTTCTGCAGAAACC	59.481	55.000	28.16	20.29	35.47	3.27
2679	3855	3.395702	TACGGCGAACCCATGGCT	61.396	61.111	16.62	0.00	32.60	4.75
2728	3904	2.188062	TTTTAACCACCGGCCTAGTG	57.812	50.000	14.27	14.27	34.91	2.74
2729	3905	2.158638	TGTTTTTAACCACCGGCCTAGT	60.159	45.455	0.00	0.00	0.00	2.57
2756	3932	4.082665	ACCAGATGCTAGCTAGTACGTA	57.917	45.455	21.62	0.00	0.00	3.57
2757	3933	2.933573	ACCAGATGCTAGCTAGTACGT	58.066	47.619	21.62	7.65	0.00	3.57
2758	3934	3.992260	AACCAGATGCTAGCTAGTACG	57.008	47.619	21.62	9.68	0.00	3.67
2838	4017	3.985279	TCTACGGAACACTCGAACAAATG	59.015	43.478	0.00	0.00	0.00	2.32
2839	4018	4.247267	TCTACGGAACACTCGAACAAAT	57.753	40.909	0.00	0.00	0.00	2.32
2855	4035	2.280628	GCCCAAACCTCATCTTCTACG	58.719	52.381	0.00	0.00	0.00	3.51
2867	4047	3.532155	TGTTGCACGGCCCAAACC	61.532	61.111	0.00	0.00	0.00	3.27
2870	4050	1.680522	AATTGTGTTGCACGGCCCAA	61.681	50.000	0.00	0.00	37.14	4.12
2872	4052	1.664333	CAATTGTGTTGCACGGCCC	60.664	57.895	0.00	0.00	37.14	5.80
2951	4132	6.239887	GCCCACCTCCTAATTCATCTGTATAA	60.240	42.308	0.00	0.00	0.00	0.98
2979	4160	9.646427	GGGAGAGTATTGAATATATTGTGTCTC	57.354	37.037	1.78	5.72	0.00	3.36
2997	4193	1.654954	GCTTCGAGTGCGGGAGAGTA	61.655	60.000	0.00	0.00	38.28	2.59
3051	4250	0.535102	CTGCCGACTTCCACCTTTGT	60.535	55.000	0.00	0.00	0.00	2.83
3128	4327	2.989639	CAGATGGCCCTTGGACGA	59.010	61.111	0.00	0.00	29.56	4.20
3142	4341	3.446310	TTCACTTTGTACGTGAGCAGA	57.554	42.857	0.00	0.00	41.85	4.26
3152	4352	4.350368	TGAGCTGGACATTCACTTTGTA	57.650	40.909	0.00	0.00	0.00	2.41
3215	4415	3.418675	CAACGTCTCTGCGGTGTAT	57.581	52.632	0.00	0.00	43.76	2.29
3260	4460	3.275999	TCAGGAGTTGCATCATGATGTG	58.724	45.455	31.09	21.10	40.80	3.21
3497	4698	1.980765	TCTTGGGCTCACTCTCACAAT	59.019	47.619	0.00	0.00	0.00	2.71
3498	4699	1.345741	CTCTTGGGCTCACTCTCACAA	59.654	52.381	0.00	0.00	0.00	3.33
3499	4700	0.972134	CTCTTGGGCTCACTCTCACA	59.028	55.000	0.00	0.00	0.00	3.58
3626	4830	1.711375	TCAGTACCTGACTCTCACCCT	59.289	52.381	0.00	0.00	35.39	4.34
3640	4844	3.189287	CCATTGTTGGTGCTCTTCAGTAC	59.811	47.826	0.00	0.00	38.30	2.73

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.