Multiple sequence alignment - TraesCS2D01G250800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G250800 chr2D 100.000 3458 0 0 1 3458 299528757 299532214 0.000000e+00 6386.0
1 TraesCS2D01G250800 chr2D 88.235 68 6 2 187 253 299527699 299527633 2.860000e-11 80.5
2 TraesCS2D01G250800 chr2D 81.111 90 10 5 3370 3455 378387187 378387101 8.010000e-07 65.8
3 TraesCS2D01G250800 chr2A 95.122 1927 50 19 611 2527 374592589 374594481 0.000000e+00 2998.0
4 TraesCS2D01G250800 chr2A 86.339 937 63 17 2569 3458 374594608 374595526 0.000000e+00 961.0
5 TraesCS2D01G250800 chr2A 91.111 45 2 2 3370 3413 513260506 513260463 3.730000e-05 60.2
6 TraesCS2D01G250800 chr2B 94.737 1900 47 14 631 2530 358531060 358529214 0.000000e+00 2905.0
7 TraesCS2D01G250800 chr2B 92.751 469 30 4 1 467 141730796 141731262 0.000000e+00 675.0
8 TraesCS2D01G250800 chr2B 87.416 445 40 7 2768 3197 358526192 358525749 6.660000e-137 497.0
9 TraesCS2D01G250800 chr2B 89.299 271 23 4 3192 3456 358521764 358521494 5.530000e-88 335.0
10 TraesCS2D01G250800 chr2B 87.562 201 10 3 2569 2769 358529112 358528927 5.810000e-53 219.0
11 TraesCS2D01G250800 chr2B 91.429 140 10 1 465 604 358542680 358542543 1.270000e-44 191.0
12 TraesCS2D01G250800 chr5B 95.671 462 20 0 4 465 669554719 669554258 0.000000e+00 743.0
13 TraesCS2D01G250800 chr5B 92.453 53 3 1 202 253 639119413 639119361 1.330000e-09 75.0
14 TraesCS2D01G250800 chr4A 93.290 462 28 3 4 464 653084674 653084215 0.000000e+00 678.0
15 TraesCS2D01G250800 chr7A 91.126 462 31 5 4 464 63797775 63797323 4.900000e-173 617.0
16 TraesCS2D01G250800 chr7A 83.146 89 11 4 168 253 63798705 63798792 1.030000e-10 78.7
17 TraesCS2D01G250800 chr3B 88.321 137 15 1 296 432 561105771 561105636 2.760000e-36 163.0
18 TraesCS2D01G250800 chr3B 86.538 52 5 2 2758 2808 152305503 152305553 4.820000e-04 56.5
19 TraesCS2D01G250800 chr5D 86.275 51 7 0 2758 2808 553454550 553454500 4.820000e-04 56.5
20 TraesCS2D01G250800 chr1B 86.538 52 5 2 2758 2808 508084388 508084338 4.820000e-04 56.5
21 TraesCS2D01G250800 chr1A 86.538 52 6 1 2757 2808 514087296 514087246 4.820000e-04 56.5
22 TraesCS2D01G250800 chr6B 86.275 51 5 2 2759 2808 256426814 256426765 2.000000e-03 54.7
23 TraesCS2D01G250800 chr7B 100.000 28 0 0 2781 2808 62076326 62076299 6.000000e-03 52.8
24 TraesCS2D01G250800 chr6D 100.000 28 0 0 1 28 177548725 177548752 6.000000e-03 52.8
25 TraesCS2D01G250800 chr4D 100.000 28 0 0 2781 2808 469658842 469658869 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G250800 chr2D 299528757 299532214 3457 False 6386.0 6386 100.0000 1 3458 1 chr2D.!!$F1 3457
1 TraesCS2D01G250800 chr2A 374592589 374595526 2937 False 1979.5 2998 90.7305 611 3458 2 chr2A.!!$F1 2847
2 TraesCS2D01G250800 chr2B 358521494 358531060 9566 True 989.0 2905 89.7535 631 3456 4 chr2B.!!$R2 2825

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 480 0.036306 GTCCGCTTGGGGAAAAGAGA 59.964 55.0 8.01 0.0 37.96 3.10 F
920 932 0.250234 CTGCCTGCTGCCTACTTACA 59.750 55.0 0.00 0.0 40.16 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2095 2107 0.109597 CAAAGCCATTCCAGACGTGC 60.110 55.0 0.0 0.0 0.00 5.34 R
2582 2699 0.108615 AGACTTCTTCGCCACCGATG 60.109 55.0 0.0 0.0 43.97 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.045634 GCATGGCAGCAGTCTGGA 60.046 61.111 1.14 0.00 40.65 3.86
18 19 2.404995 GCATGGCAGCAGTCTGGAC 61.405 63.158 1.14 0.00 40.65 4.02
19 20 2.104859 CATGGCAGCAGTCTGGACG 61.105 63.158 1.14 0.00 40.65 4.79
20 21 3.965539 ATGGCAGCAGTCTGGACGC 62.966 63.158 1.14 8.61 40.65 5.19
26 27 4.680237 CAGTCTGGACGCCCGCAA 62.680 66.667 0.00 0.00 36.20 4.85
27 28 3.936203 AGTCTGGACGCCCGCAAA 61.936 61.111 0.00 0.00 36.20 3.68
28 29 3.423154 GTCTGGACGCCCGCAAAG 61.423 66.667 0.00 0.00 34.29 2.77
29 30 3.936203 TCTGGACGCCCGCAAAGT 61.936 61.111 0.00 0.00 34.29 2.66
30 31 3.423154 CTGGACGCCCGCAAAGTC 61.423 66.667 0.00 0.00 34.29 3.01
33 34 3.119096 GACGCCCGCAAAGTCCTC 61.119 66.667 0.00 0.00 0.00 3.71
34 35 4.699522 ACGCCCGCAAAGTCCTCC 62.700 66.667 0.00 0.00 0.00 4.30
35 36 4.394712 CGCCCGCAAAGTCCTCCT 62.395 66.667 0.00 0.00 0.00 3.69
36 37 2.436824 GCCCGCAAAGTCCTCCTC 60.437 66.667 0.00 0.00 0.00 3.71
37 38 2.960688 GCCCGCAAAGTCCTCCTCT 61.961 63.158 0.00 0.00 0.00 3.69
38 39 1.219393 CCCGCAAAGTCCTCCTCTC 59.781 63.158 0.00 0.00 0.00 3.20
39 40 1.219393 CCGCAAAGTCCTCCTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
40 41 1.219393 CGCAAAGTCCTCCTCTCCC 59.781 63.158 0.00 0.00 0.00 4.30
41 42 1.604915 GCAAAGTCCTCCTCTCCCC 59.395 63.158 0.00 0.00 0.00 4.81
42 43 0.912006 GCAAAGTCCTCCTCTCCCCT 60.912 60.000 0.00 0.00 0.00 4.79
43 44 1.199615 CAAAGTCCTCCTCTCCCCTC 58.800 60.000 0.00 0.00 0.00 4.30
44 45 0.324830 AAAGTCCTCCTCTCCCCTCG 60.325 60.000 0.00 0.00 0.00 4.63
45 46 2.123640 GTCCTCCTCTCCCCTCGG 60.124 72.222 0.00 0.00 0.00 4.63
46 47 2.617538 TCCTCCTCTCCCCTCGGT 60.618 66.667 0.00 0.00 0.00 4.69
47 48 2.246874 TCCTCCTCTCCCCTCGGTT 61.247 63.158 0.00 0.00 0.00 4.44
48 49 1.306226 CCTCCTCTCCCCTCGGTTT 60.306 63.158 0.00 0.00 0.00 3.27
49 50 1.617947 CCTCCTCTCCCCTCGGTTTG 61.618 65.000 0.00 0.00 0.00 2.93
50 51 2.245438 CTCCTCTCCCCTCGGTTTGC 62.245 65.000 0.00 0.00 0.00 3.68
51 52 2.294078 CCTCTCCCCTCGGTTTGCT 61.294 63.158 0.00 0.00 0.00 3.91
52 53 1.679898 CTCTCCCCTCGGTTTGCTT 59.320 57.895 0.00 0.00 0.00 3.91
53 54 0.391793 CTCTCCCCTCGGTTTGCTTC 60.392 60.000 0.00 0.00 0.00 3.86
54 55 0.836400 TCTCCCCTCGGTTTGCTTCT 60.836 55.000 0.00 0.00 0.00 2.85
55 56 0.902531 CTCCCCTCGGTTTGCTTCTA 59.097 55.000 0.00 0.00 0.00 2.10
56 57 0.902531 TCCCCTCGGTTTGCTTCTAG 59.097 55.000 0.00 0.00 0.00 2.43
57 58 0.613777 CCCCTCGGTTTGCTTCTAGT 59.386 55.000 0.00 0.00 0.00 2.57
58 59 1.003233 CCCCTCGGTTTGCTTCTAGTT 59.997 52.381 0.00 0.00 0.00 2.24
59 60 2.552373 CCCCTCGGTTTGCTTCTAGTTT 60.552 50.000 0.00 0.00 0.00 2.66
60 61 2.484264 CCCTCGGTTTGCTTCTAGTTTG 59.516 50.000 0.00 0.00 0.00 2.93
61 62 2.095718 CCTCGGTTTGCTTCTAGTTTGC 60.096 50.000 0.00 0.00 0.00 3.68
62 63 1.877443 TCGGTTTGCTTCTAGTTTGCC 59.123 47.619 0.00 0.00 0.00 4.52
63 64 1.399727 CGGTTTGCTTCTAGTTTGCCG 60.400 52.381 0.00 0.00 0.00 5.69
64 65 1.607148 GGTTTGCTTCTAGTTTGCCGT 59.393 47.619 0.00 0.00 0.00 5.68
65 66 2.809696 GGTTTGCTTCTAGTTTGCCGTA 59.190 45.455 0.00 0.00 0.00 4.02
66 67 3.251487 GGTTTGCTTCTAGTTTGCCGTAA 59.749 43.478 0.00 0.00 0.00 3.18
67 68 4.261280 GGTTTGCTTCTAGTTTGCCGTAAA 60.261 41.667 0.00 0.00 0.00 2.01
68 69 5.275494 GTTTGCTTCTAGTTTGCCGTAAAA 58.725 37.500 0.00 0.00 0.00 1.52
69 70 5.502153 TTGCTTCTAGTTTGCCGTAAAAA 57.498 34.783 0.00 0.00 0.00 1.94
88 89 2.751166 AAGGACATCTGGACAAGTCG 57.249 50.000 0.00 0.00 31.93 4.18
89 90 1.924731 AGGACATCTGGACAAGTCGA 58.075 50.000 0.00 0.00 31.93 4.20
90 91 1.546476 AGGACATCTGGACAAGTCGAC 59.454 52.381 7.70 7.70 31.93 4.20
91 92 1.618861 GACATCTGGACAAGTCGACG 58.381 55.000 10.46 0.00 0.00 5.12
92 93 0.243907 ACATCTGGACAAGTCGACGG 59.756 55.000 10.46 9.32 0.00 4.79
93 94 0.526211 CATCTGGACAAGTCGACGGA 59.474 55.000 10.46 0.00 0.00 4.69
94 95 1.135139 CATCTGGACAAGTCGACGGAT 59.865 52.381 10.46 0.00 0.00 4.18
95 96 2.118313 TCTGGACAAGTCGACGGATA 57.882 50.000 10.46 0.00 0.00 2.59
96 97 2.014857 TCTGGACAAGTCGACGGATAG 58.985 52.381 10.46 5.67 0.00 2.08
97 98 2.014857 CTGGACAAGTCGACGGATAGA 58.985 52.381 10.46 0.00 0.00 1.98
98 99 2.619177 CTGGACAAGTCGACGGATAGAT 59.381 50.000 10.46 0.00 0.00 1.98
99 100 2.357952 TGGACAAGTCGACGGATAGATG 59.642 50.000 10.46 4.78 0.00 2.90
100 101 2.358267 GGACAAGTCGACGGATAGATGT 59.642 50.000 10.46 7.81 0.00 3.06
101 102 3.364062 GACAAGTCGACGGATAGATGTG 58.636 50.000 10.46 1.47 0.00 3.21
102 103 2.099263 ACAAGTCGACGGATAGATGTGG 59.901 50.000 10.46 0.00 0.00 4.17
103 104 1.319541 AGTCGACGGATAGATGTGGG 58.680 55.000 10.46 0.00 0.00 4.61
104 105 1.133884 AGTCGACGGATAGATGTGGGA 60.134 52.381 10.46 0.00 0.00 4.37
105 106 1.001597 GTCGACGGATAGATGTGGGAC 60.002 57.143 0.00 0.00 0.00 4.46
106 107 1.133884 TCGACGGATAGATGTGGGACT 60.134 52.381 0.00 0.00 0.00 3.85
107 108 1.001268 CGACGGATAGATGTGGGACTG 60.001 57.143 0.00 0.00 0.00 3.51
108 109 2.032620 GACGGATAGATGTGGGACTGT 58.967 52.381 0.00 0.00 0.00 3.55
109 110 3.220110 GACGGATAGATGTGGGACTGTA 58.780 50.000 0.00 0.00 0.00 2.74
110 111 3.827302 GACGGATAGATGTGGGACTGTAT 59.173 47.826 0.00 0.00 0.00 2.29
111 112 4.223953 ACGGATAGATGTGGGACTGTATT 58.776 43.478 0.00 0.00 0.00 1.89
112 113 4.039245 ACGGATAGATGTGGGACTGTATTG 59.961 45.833 0.00 0.00 0.00 1.90
113 114 4.561530 CGGATAGATGTGGGACTGTATTGG 60.562 50.000 0.00 0.00 0.00 3.16
114 115 4.593206 GGATAGATGTGGGACTGTATTGGA 59.407 45.833 0.00 0.00 0.00 3.53
115 116 5.249393 GGATAGATGTGGGACTGTATTGGAT 59.751 44.000 0.00 0.00 0.00 3.41
116 117 4.428294 AGATGTGGGACTGTATTGGATG 57.572 45.455 0.00 0.00 0.00 3.51
117 118 3.137176 AGATGTGGGACTGTATTGGATGG 59.863 47.826 0.00 0.00 0.00 3.51
118 119 1.064758 TGTGGGACTGTATTGGATGGC 60.065 52.381 0.00 0.00 0.00 4.40
119 120 1.064758 GTGGGACTGTATTGGATGGCA 60.065 52.381 0.00 0.00 0.00 4.92
120 121 1.638070 TGGGACTGTATTGGATGGCAA 59.362 47.619 0.00 0.00 0.00 4.52
121 122 2.042297 TGGGACTGTATTGGATGGCAAA 59.958 45.455 0.00 0.00 0.00 3.68
122 123 3.096092 GGGACTGTATTGGATGGCAAAA 58.904 45.455 0.00 0.00 0.00 2.44
123 124 3.119137 GGGACTGTATTGGATGGCAAAAC 60.119 47.826 0.00 0.00 0.00 2.43
124 125 3.509575 GGACTGTATTGGATGGCAAAACA 59.490 43.478 0.00 0.00 0.00 2.83
125 126 4.160252 GGACTGTATTGGATGGCAAAACAT 59.840 41.667 0.00 0.00 0.00 2.71
126 127 5.075858 ACTGTATTGGATGGCAAAACATG 57.924 39.130 0.00 0.00 0.00 3.21
127 128 4.527816 ACTGTATTGGATGGCAAAACATGT 59.472 37.500 0.00 0.00 0.00 3.21
128 129 5.011943 ACTGTATTGGATGGCAAAACATGTT 59.988 36.000 4.92 4.92 0.00 2.71
129 130 5.477510 TGTATTGGATGGCAAAACATGTTC 58.522 37.500 12.39 0.00 0.00 3.18
130 131 2.721274 TGGATGGCAAAACATGTTCG 57.279 45.000 12.39 7.56 0.00 3.95
131 132 2.234143 TGGATGGCAAAACATGTTCGA 58.766 42.857 12.39 0.00 0.00 3.71
132 133 2.625314 TGGATGGCAAAACATGTTCGAA 59.375 40.909 12.39 0.00 0.00 3.71
133 134 3.257873 TGGATGGCAAAACATGTTCGAAT 59.742 39.130 12.39 4.27 0.00 3.34
134 135 4.460731 TGGATGGCAAAACATGTTCGAATA 59.539 37.500 12.39 0.00 0.00 1.75
135 136 5.036737 GGATGGCAAAACATGTTCGAATAG 58.963 41.667 12.39 0.00 0.00 1.73
136 137 5.393027 GGATGGCAAAACATGTTCGAATAGT 60.393 40.000 12.39 0.00 0.00 2.12
137 138 4.793071 TGGCAAAACATGTTCGAATAGTG 58.207 39.130 12.39 3.51 0.00 2.74
138 139 3.608073 GGCAAAACATGTTCGAATAGTGC 59.392 43.478 12.39 11.94 0.00 4.40
139 140 4.475944 GCAAAACATGTTCGAATAGTGCT 58.524 39.130 12.39 0.00 0.00 4.40
140 141 5.391523 GGCAAAACATGTTCGAATAGTGCTA 60.392 40.000 12.39 0.00 0.00 3.49
141 142 6.258160 GCAAAACATGTTCGAATAGTGCTAT 58.742 36.000 12.39 0.00 0.00 2.97
142 143 6.747280 GCAAAACATGTTCGAATAGTGCTATT 59.253 34.615 12.39 4.30 38.38 1.73
143 144 7.044706 GCAAAACATGTTCGAATAGTGCTATTC 60.045 37.037 12.39 17.50 44.80 1.75
155 156 8.495554 GAATAGTGCTATTCGGATCGTATATG 57.504 38.462 13.97 0.00 41.12 1.78
156 157 5.899120 AGTGCTATTCGGATCGTATATGT 57.101 39.130 0.00 0.00 0.00 2.29
157 158 5.641709 AGTGCTATTCGGATCGTATATGTG 58.358 41.667 0.00 0.00 0.00 3.21
158 159 4.265556 GTGCTATTCGGATCGTATATGTGC 59.734 45.833 0.00 0.00 0.00 4.57
159 160 3.482472 GCTATTCGGATCGTATATGTGCG 59.518 47.826 0.00 0.00 34.56 5.34
160 161 3.842732 ATTCGGATCGTATATGTGCGA 57.157 42.857 4.97 4.97 46.20 5.10
169 170 5.204409 TCGTATATGTGCGATTTAAGGGT 57.796 39.130 0.00 0.00 37.55 4.34
170 171 5.224888 TCGTATATGTGCGATTTAAGGGTC 58.775 41.667 0.00 0.00 37.55 4.46
171 172 4.387862 CGTATATGTGCGATTTAAGGGTCC 59.612 45.833 0.00 0.00 35.29 4.46
172 173 2.799126 ATGTGCGATTTAAGGGTCCA 57.201 45.000 0.00 0.00 0.00 4.02
173 174 1.816074 TGTGCGATTTAAGGGTCCAC 58.184 50.000 0.00 0.00 0.00 4.02
174 175 0.725117 GTGCGATTTAAGGGTCCACG 59.275 55.000 0.00 0.00 0.00 4.94
175 176 0.322322 TGCGATTTAAGGGTCCACGT 59.678 50.000 0.00 0.00 0.00 4.49
176 177 1.004595 GCGATTTAAGGGTCCACGTC 58.995 55.000 0.00 0.00 0.00 4.34
177 178 1.673626 GCGATTTAAGGGTCCACGTCA 60.674 52.381 0.00 0.00 0.00 4.35
178 179 2.690786 CGATTTAAGGGTCCACGTCAA 58.309 47.619 0.00 0.00 0.00 3.18
179 180 3.068560 CGATTTAAGGGTCCACGTCAAA 58.931 45.455 0.00 0.00 0.00 2.69
180 181 3.124636 CGATTTAAGGGTCCACGTCAAAG 59.875 47.826 0.00 0.00 0.00 2.77
181 182 3.842007 TTTAAGGGTCCACGTCAAAGA 57.158 42.857 0.00 0.00 0.00 2.52
182 183 4.360951 TTTAAGGGTCCACGTCAAAGAT 57.639 40.909 0.00 0.00 0.00 2.40
183 184 5.486735 TTTAAGGGTCCACGTCAAAGATA 57.513 39.130 0.00 0.00 0.00 1.98
184 185 5.687166 TTAAGGGTCCACGTCAAAGATAT 57.313 39.130 0.00 0.00 0.00 1.63
185 186 3.821421 AGGGTCCACGTCAAAGATATC 57.179 47.619 0.00 0.00 0.00 1.63
186 187 2.434702 AGGGTCCACGTCAAAGATATCC 59.565 50.000 0.00 0.00 0.00 2.59
187 188 2.434702 GGGTCCACGTCAAAGATATCCT 59.565 50.000 0.00 0.00 0.00 3.24
188 189 3.640029 GGGTCCACGTCAAAGATATCCTA 59.360 47.826 0.00 0.00 0.00 2.94
189 190 4.100498 GGGTCCACGTCAAAGATATCCTAA 59.900 45.833 0.00 0.00 0.00 2.69
190 191 5.048507 GGTCCACGTCAAAGATATCCTAAC 58.951 45.833 0.00 0.00 0.00 2.34
191 192 5.163437 GGTCCACGTCAAAGATATCCTAACT 60.163 44.000 0.00 0.00 0.00 2.24
192 193 5.749109 GTCCACGTCAAAGATATCCTAACTG 59.251 44.000 0.00 0.00 0.00 3.16
193 194 5.655090 TCCACGTCAAAGATATCCTAACTGA 59.345 40.000 0.00 0.00 0.00 3.41
194 195 5.749109 CCACGTCAAAGATATCCTAACTGAC 59.251 44.000 0.00 4.94 0.00 3.51
195 196 6.405953 CCACGTCAAAGATATCCTAACTGACT 60.406 42.308 0.00 0.00 31.83 3.41
196 197 6.473778 CACGTCAAAGATATCCTAACTGACTG 59.526 42.308 0.00 5.31 31.83 3.51
197 198 5.980116 CGTCAAAGATATCCTAACTGACTGG 59.020 44.000 0.00 0.00 31.83 4.00
198 199 6.183360 CGTCAAAGATATCCTAACTGACTGGA 60.183 42.308 0.00 0.00 31.83 3.86
199 200 7.556844 GTCAAAGATATCCTAACTGACTGGAA 58.443 38.462 0.00 0.00 33.20 3.53
200 201 8.041323 GTCAAAGATATCCTAACTGACTGGAAA 58.959 37.037 0.00 0.00 33.20 3.13
201 202 8.602424 TCAAAGATATCCTAACTGACTGGAAAA 58.398 33.333 0.00 0.00 33.20 2.29
202 203 9.231297 CAAAGATATCCTAACTGACTGGAAAAA 57.769 33.333 0.00 0.00 33.20 1.94
203 204 9.981460 AAAGATATCCTAACTGACTGGAAAAAT 57.019 29.630 0.00 0.00 33.20 1.82
204 205 9.981460 AAGATATCCTAACTGACTGGAAAAATT 57.019 29.630 0.00 0.00 33.20 1.82
231 232 7.545362 AATCACTTCACTCAGTATACAATGC 57.455 36.000 5.50 0.00 0.00 3.56
232 233 5.419542 TCACTTCACTCAGTATACAATGCC 58.580 41.667 5.50 0.00 0.00 4.40
233 234 5.046663 TCACTTCACTCAGTATACAATGCCA 60.047 40.000 5.50 0.00 0.00 4.92
234 235 5.819379 CACTTCACTCAGTATACAATGCCAT 59.181 40.000 5.50 0.00 0.00 4.40
235 236 6.317140 CACTTCACTCAGTATACAATGCCATT 59.683 38.462 5.50 0.00 0.00 3.16
236 237 6.886459 ACTTCACTCAGTATACAATGCCATTT 59.114 34.615 5.50 0.00 0.00 2.32
237 238 6.682423 TCACTCAGTATACAATGCCATTTG 57.318 37.500 5.50 0.00 0.00 2.32
238 239 6.179756 TCACTCAGTATACAATGCCATTTGT 58.820 36.000 5.50 2.86 42.31 2.83
239 240 7.334858 TCACTCAGTATACAATGCCATTTGTA 58.665 34.615 5.50 6.49 43.96 2.41
241 242 9.271828 CACTCAGTATACAATGCCATTTGTATA 57.728 33.333 14.89 14.89 46.07 1.47
246 247 4.710423 ACAATGCCATTTGTATAACGCA 57.290 36.364 0.00 0.00 38.04 5.24
247 248 4.671377 ACAATGCCATTTGTATAACGCAG 58.329 39.130 0.00 0.00 38.04 5.18
248 249 4.397730 ACAATGCCATTTGTATAACGCAGA 59.602 37.500 0.00 0.00 38.04 4.26
249 250 4.552166 ATGCCATTTGTATAACGCAGAC 57.448 40.909 0.00 0.00 0.00 3.51
250 251 3.339141 TGCCATTTGTATAACGCAGACA 58.661 40.909 0.00 0.00 0.00 3.41
251 252 3.373748 TGCCATTTGTATAACGCAGACAG 59.626 43.478 0.00 0.00 28.18 3.51
252 253 3.242739 GCCATTTGTATAACGCAGACAGG 60.243 47.826 0.00 0.00 28.18 4.00
253 254 3.938963 CCATTTGTATAACGCAGACAGGT 59.061 43.478 0.00 0.00 28.18 4.00
254 255 4.394920 CCATTTGTATAACGCAGACAGGTT 59.605 41.667 0.00 0.00 28.18 3.50
255 256 5.106317 CCATTTGTATAACGCAGACAGGTTT 60.106 40.000 0.00 0.00 28.18 3.27
256 257 5.351233 TTTGTATAACGCAGACAGGTTTG 57.649 39.130 0.00 0.00 28.18 2.93
257 258 3.997762 TGTATAACGCAGACAGGTTTGT 58.002 40.909 0.00 0.00 41.18 2.83
258 259 5.136816 TGTATAACGCAGACAGGTTTGTA 57.863 39.130 0.00 0.00 37.76 2.41
259 260 5.726397 TGTATAACGCAGACAGGTTTGTAT 58.274 37.500 0.00 0.00 37.76 2.29
260 261 6.167685 TGTATAACGCAGACAGGTTTGTATT 58.832 36.000 0.00 0.00 37.76 1.89
261 262 3.896648 AACGCAGACAGGTTTGTATTG 57.103 42.857 0.00 0.00 37.76 1.90
262 263 2.846193 ACGCAGACAGGTTTGTATTGT 58.154 42.857 0.00 0.00 37.76 2.71
263 264 3.211045 ACGCAGACAGGTTTGTATTGTT 58.789 40.909 0.00 0.00 37.76 2.83
264 265 4.382291 ACGCAGACAGGTTTGTATTGTTA 58.618 39.130 0.00 0.00 37.76 2.41
265 266 4.817464 ACGCAGACAGGTTTGTATTGTTAA 59.183 37.500 0.00 0.00 37.76 2.01
266 267 5.144359 CGCAGACAGGTTTGTATTGTTAAC 58.856 41.667 0.00 0.00 37.76 2.01
267 268 5.049680 CGCAGACAGGTTTGTATTGTTAACT 60.050 40.000 7.22 0.00 37.76 2.24
268 269 6.142817 GCAGACAGGTTTGTATTGTTAACTG 58.857 40.000 7.22 0.00 37.76 3.16
269 270 6.017440 GCAGACAGGTTTGTATTGTTAACTGA 60.017 38.462 7.22 0.00 37.76 3.41
270 271 7.352739 CAGACAGGTTTGTATTGTTAACTGAC 58.647 38.462 7.22 2.99 37.76 3.51
271 272 7.226720 CAGACAGGTTTGTATTGTTAACTGACT 59.773 37.037 7.22 0.00 37.76 3.41
272 273 7.226720 AGACAGGTTTGTATTGTTAACTGACTG 59.773 37.037 7.22 5.23 37.76 3.51
273 274 7.051623 ACAGGTTTGTATTGTTAACTGACTGA 58.948 34.615 7.22 0.00 35.25 3.41
274 275 7.554835 ACAGGTTTGTATTGTTAACTGACTGAA 59.445 33.333 7.22 0.00 35.25 3.02
275 276 8.402472 CAGGTTTGTATTGTTAACTGACTGAAA 58.598 33.333 7.22 0.00 0.00 2.69
276 277 9.131791 AGGTTTGTATTGTTAACTGACTGAAAT 57.868 29.630 7.22 0.00 0.00 2.17
285 286 9.554395 TTGTTAACTGACTGAAATAATGACTGA 57.446 29.630 7.22 0.00 0.00 3.41
286 287 9.554395 TGTTAACTGACTGAAATAATGACTGAA 57.446 29.630 7.22 0.00 0.00 3.02
290 291 7.576236 ACTGACTGAAATAATGACTGAAAACG 58.424 34.615 0.00 0.00 0.00 3.60
291 292 7.441157 ACTGACTGAAATAATGACTGAAAACGA 59.559 33.333 0.00 0.00 0.00 3.85
292 293 7.796838 TGACTGAAATAATGACTGAAAACGAG 58.203 34.615 0.00 0.00 0.00 4.18
293 294 6.603095 ACTGAAATAATGACTGAAAACGAGC 58.397 36.000 0.00 0.00 0.00 5.03
294 295 6.428159 ACTGAAATAATGACTGAAAACGAGCT 59.572 34.615 0.00 0.00 0.00 4.09
295 296 6.602179 TGAAATAATGACTGAAAACGAGCTG 58.398 36.000 0.00 0.00 0.00 4.24
296 297 6.426633 TGAAATAATGACTGAAAACGAGCTGA 59.573 34.615 0.00 0.00 0.00 4.26
297 298 6.801539 AATAATGACTGAAAACGAGCTGAA 57.198 33.333 0.00 0.00 0.00 3.02
298 299 6.801539 ATAATGACTGAAAACGAGCTGAAA 57.198 33.333 0.00 0.00 0.00 2.69
299 300 5.499139 AATGACTGAAAACGAGCTGAAAA 57.501 34.783 0.00 0.00 0.00 2.29
300 301 4.955925 TGACTGAAAACGAGCTGAAAAA 57.044 36.364 0.00 0.00 0.00 1.94
301 302 4.658071 TGACTGAAAACGAGCTGAAAAAC 58.342 39.130 0.00 0.00 0.00 2.43
302 303 4.394920 TGACTGAAAACGAGCTGAAAAACT 59.605 37.500 0.00 0.00 0.00 2.66
303 304 5.583061 TGACTGAAAACGAGCTGAAAAACTA 59.417 36.000 0.00 0.00 0.00 2.24
304 305 6.092944 TGACTGAAAACGAGCTGAAAAACTAA 59.907 34.615 0.00 0.00 0.00 2.24
305 306 7.027778 ACTGAAAACGAGCTGAAAAACTAAT 57.972 32.000 0.00 0.00 0.00 1.73
306 307 6.912591 ACTGAAAACGAGCTGAAAAACTAATG 59.087 34.615 0.00 0.00 0.00 1.90
307 308 5.685511 TGAAAACGAGCTGAAAAACTAATGC 59.314 36.000 0.00 0.00 0.00 3.56
308 309 5.438761 AAACGAGCTGAAAAACTAATGCT 57.561 34.783 0.00 0.00 0.00 3.79
309 310 4.670227 ACGAGCTGAAAAACTAATGCTC 57.330 40.909 0.00 0.00 42.17 4.26
311 312 4.670227 GAGCTGAAAAACTAATGCTCGT 57.330 40.909 0.00 0.00 37.71 4.18
312 313 5.035784 GAGCTGAAAAACTAATGCTCGTT 57.964 39.130 0.00 0.00 37.71 3.85
313 314 5.438761 AGCTGAAAAACTAATGCTCGTTT 57.561 34.783 0.00 0.00 35.04 3.60
314 315 5.452777 AGCTGAAAAACTAATGCTCGTTTC 58.547 37.500 0.00 0.00 32.60 2.78
315 316 4.318332 GCTGAAAAACTAATGCTCGTTTCG 59.682 41.667 0.00 0.00 32.60 3.46
316 317 4.778904 TGAAAAACTAATGCTCGTTTCGG 58.221 39.130 0.00 0.00 32.60 4.30
317 318 2.894307 AAACTAATGCTCGTTTCGGC 57.106 45.000 0.00 0.00 0.00 5.54
318 319 2.094762 AACTAATGCTCGTTTCGGCT 57.905 45.000 0.00 0.00 0.00 5.52
319 320 1.359848 ACTAATGCTCGTTTCGGCTG 58.640 50.000 0.00 0.00 0.00 4.85
320 321 1.337823 ACTAATGCTCGTTTCGGCTGT 60.338 47.619 0.00 0.00 0.00 4.40
321 322 1.061131 CTAATGCTCGTTTCGGCTGTG 59.939 52.381 0.00 0.00 0.00 3.66
322 323 2.187599 AATGCTCGTTTCGGCTGTGC 62.188 55.000 0.00 0.00 0.00 4.57
323 324 3.044305 GCTCGTTTCGGCTGTGCT 61.044 61.111 0.00 0.00 0.00 4.40
324 325 2.856032 CTCGTTTCGGCTGTGCTG 59.144 61.111 0.00 0.00 36.06 4.41
325 326 3.300667 CTCGTTTCGGCTGTGCTGC 62.301 63.158 0.00 0.00 34.49 5.25
326 327 4.724697 CGTTTCGGCTGTGCTGCG 62.725 66.667 0.00 0.00 34.49 5.18
333 334 4.175489 GCTGTGCTGCGCTGGATG 62.175 66.667 19.38 11.16 0.00 3.51
334 335 3.506096 CTGTGCTGCGCTGGATGG 61.506 66.667 16.47 6.51 0.00 3.51
335 336 3.963687 CTGTGCTGCGCTGGATGGA 62.964 63.158 16.47 1.12 0.00 3.41
336 337 3.503363 GTGCTGCGCTGGATGGAC 61.503 66.667 16.47 5.29 0.00 4.02
337 338 4.783621 TGCTGCGCTGGATGGACC 62.784 66.667 16.47 0.00 39.54 4.46
339 340 4.147449 CTGCGCTGGATGGACCGA 62.147 66.667 9.73 0.00 42.61 4.69
340 341 4.147449 TGCGCTGGATGGACCGAG 62.147 66.667 9.73 0.00 42.61 4.63
343 344 4.148825 GCTGGATGGACCGAGCGT 62.149 66.667 0.00 0.00 42.61 5.07
344 345 2.202797 CTGGATGGACCGAGCGTG 60.203 66.667 0.00 0.00 42.61 5.34
345 346 2.994995 TGGATGGACCGAGCGTGT 60.995 61.111 0.00 0.00 42.61 4.49
346 347 1.663379 CTGGATGGACCGAGCGTGTA 61.663 60.000 0.00 0.00 42.61 2.90
347 348 1.252215 TGGATGGACCGAGCGTGTAA 61.252 55.000 0.00 0.00 42.61 2.41
348 349 0.527817 GGATGGACCGAGCGTGTAAG 60.528 60.000 0.00 0.00 0.00 2.34
349 350 0.172803 GATGGACCGAGCGTGTAAGT 59.827 55.000 0.00 0.00 0.00 2.24
350 351 0.108804 ATGGACCGAGCGTGTAAGTG 60.109 55.000 0.00 0.00 0.00 3.16
351 352 1.288127 GGACCGAGCGTGTAAGTGT 59.712 57.895 0.00 0.00 0.00 3.55
352 353 1.007336 GGACCGAGCGTGTAAGTGTG 61.007 60.000 0.00 0.00 0.00 3.82
353 354 1.006571 ACCGAGCGTGTAAGTGTGG 60.007 57.895 0.00 0.00 0.00 4.17
354 355 1.736645 CCGAGCGTGTAAGTGTGGG 60.737 63.158 0.00 0.00 0.00 4.61
355 356 1.736645 CGAGCGTGTAAGTGTGGGG 60.737 63.158 0.00 0.00 0.00 4.96
356 357 1.370064 GAGCGTGTAAGTGTGGGGT 59.630 57.895 0.00 0.00 0.00 4.95
357 358 0.949105 GAGCGTGTAAGTGTGGGGTG 60.949 60.000 0.00 0.00 0.00 4.61
358 359 1.227734 GCGTGTAAGTGTGGGGTGT 60.228 57.895 0.00 0.00 0.00 4.16
359 360 0.816421 GCGTGTAAGTGTGGGGTGTT 60.816 55.000 0.00 0.00 0.00 3.32
360 361 1.670791 CGTGTAAGTGTGGGGTGTTT 58.329 50.000 0.00 0.00 0.00 2.83
361 362 2.018515 CGTGTAAGTGTGGGGTGTTTT 58.981 47.619 0.00 0.00 0.00 2.43
362 363 2.424246 CGTGTAAGTGTGGGGTGTTTTT 59.576 45.455 0.00 0.00 0.00 1.94
363 364 3.732471 CGTGTAAGTGTGGGGTGTTTTTG 60.732 47.826 0.00 0.00 0.00 2.44
364 365 3.193903 GTGTAAGTGTGGGGTGTTTTTGT 59.806 43.478 0.00 0.00 0.00 2.83
365 366 3.833070 TGTAAGTGTGGGGTGTTTTTGTT 59.167 39.130 0.00 0.00 0.00 2.83
366 367 3.603158 AAGTGTGGGGTGTTTTTGTTC 57.397 42.857 0.00 0.00 0.00 3.18
367 368 2.815158 AGTGTGGGGTGTTTTTGTTCT 58.185 42.857 0.00 0.00 0.00 3.01
368 369 2.495669 AGTGTGGGGTGTTTTTGTTCTG 59.504 45.455 0.00 0.00 0.00 3.02
369 370 1.827969 TGTGGGGTGTTTTTGTTCTGG 59.172 47.619 0.00 0.00 0.00 3.86
370 371 2.104170 GTGGGGTGTTTTTGTTCTGGA 58.896 47.619 0.00 0.00 0.00 3.86
371 372 2.698274 GTGGGGTGTTTTTGTTCTGGAT 59.302 45.455 0.00 0.00 0.00 3.41
372 373 2.697751 TGGGGTGTTTTTGTTCTGGATG 59.302 45.455 0.00 0.00 0.00 3.51
373 374 2.037121 GGGGTGTTTTTGTTCTGGATGG 59.963 50.000 0.00 0.00 0.00 3.51
374 375 2.547855 GGGTGTTTTTGTTCTGGATGGC 60.548 50.000 0.00 0.00 0.00 4.40
375 376 2.365293 GGTGTTTTTGTTCTGGATGGCT 59.635 45.455 0.00 0.00 0.00 4.75
376 377 3.383761 GTGTTTTTGTTCTGGATGGCTG 58.616 45.455 0.00 0.00 0.00 4.85
377 378 3.030291 TGTTTTTGTTCTGGATGGCTGT 58.970 40.909 0.00 0.00 0.00 4.40
378 379 3.450457 TGTTTTTGTTCTGGATGGCTGTT 59.550 39.130 0.00 0.00 0.00 3.16
379 380 3.731652 TTTTGTTCTGGATGGCTGTTG 57.268 42.857 0.00 0.00 0.00 3.33
380 381 2.363306 TTGTTCTGGATGGCTGTTGT 57.637 45.000 0.00 0.00 0.00 3.32
381 382 1.896220 TGTTCTGGATGGCTGTTGTC 58.104 50.000 0.00 0.00 0.00 3.18
382 383 1.168714 GTTCTGGATGGCTGTTGTCC 58.831 55.000 0.00 0.00 0.00 4.02
383 384 0.321564 TTCTGGATGGCTGTTGTCCG 60.322 55.000 0.00 0.00 34.72 4.79
384 385 1.003355 CTGGATGGCTGTTGTCCGT 60.003 57.895 0.00 0.00 34.72 4.69
385 386 0.606401 CTGGATGGCTGTTGTCCGTT 60.606 55.000 0.00 0.00 34.72 4.44
386 387 0.888736 TGGATGGCTGTTGTCCGTTG 60.889 55.000 0.00 0.00 34.72 4.10
387 388 1.586154 GGATGGCTGTTGTCCGTTGG 61.586 60.000 0.00 0.00 0.00 3.77
388 389 0.605319 GATGGCTGTTGTCCGTTGGA 60.605 55.000 0.00 0.00 0.00 3.53
389 390 0.038166 ATGGCTGTTGTCCGTTGGAT 59.962 50.000 0.00 0.00 32.73 3.41
390 391 0.888736 TGGCTGTTGTCCGTTGGATG 60.889 55.000 0.00 0.00 32.73 3.51
391 392 1.586154 GGCTGTTGTCCGTTGGATGG 61.586 60.000 0.00 0.00 32.73 3.51
392 393 0.889186 GCTGTTGTCCGTTGGATGGT 60.889 55.000 0.00 0.00 32.73 3.55
393 394 0.874390 CTGTTGTCCGTTGGATGGTG 59.126 55.000 0.00 0.00 32.73 4.17
394 395 0.181587 TGTTGTCCGTTGGATGGTGT 59.818 50.000 0.00 0.00 32.73 4.16
395 396 1.314730 GTTGTCCGTTGGATGGTGTT 58.685 50.000 0.00 0.00 32.73 3.32
396 397 1.679153 GTTGTCCGTTGGATGGTGTTT 59.321 47.619 0.00 0.00 32.73 2.83
397 398 1.313772 TGTCCGTTGGATGGTGTTTG 58.686 50.000 0.00 0.00 32.73 2.93
398 399 1.134068 TGTCCGTTGGATGGTGTTTGA 60.134 47.619 0.00 0.00 32.73 2.69
399 400 1.950909 GTCCGTTGGATGGTGTTTGAA 59.049 47.619 0.00 0.00 32.73 2.69
400 401 2.556622 GTCCGTTGGATGGTGTTTGAAT 59.443 45.455 0.00 0.00 32.73 2.57
401 402 2.556189 TCCGTTGGATGGTGTTTGAATG 59.444 45.455 0.00 0.00 0.00 2.67
402 403 2.352617 CCGTTGGATGGTGTTTGAATGG 60.353 50.000 0.00 0.00 0.00 3.16
403 404 2.687370 GTTGGATGGTGTTTGAATGGC 58.313 47.619 0.00 0.00 0.00 4.40
404 405 2.299867 GTTGGATGGTGTTTGAATGGCT 59.700 45.455 0.00 0.00 0.00 4.75
405 406 1.894466 TGGATGGTGTTTGAATGGCTG 59.106 47.619 0.00 0.00 0.00 4.85
406 407 2.170166 GGATGGTGTTTGAATGGCTGA 58.830 47.619 0.00 0.00 0.00 4.26
407 408 2.762327 GGATGGTGTTTGAATGGCTGAT 59.238 45.455 0.00 0.00 0.00 2.90
408 409 3.429822 GGATGGTGTTTGAATGGCTGATG 60.430 47.826 0.00 0.00 0.00 3.07
409 410 1.273048 TGGTGTTTGAATGGCTGATGC 59.727 47.619 0.00 0.00 38.76 3.91
410 411 1.273048 GGTGTTTGAATGGCTGATGCA 59.727 47.619 0.00 0.00 41.91 3.96
411 412 2.093869 GGTGTTTGAATGGCTGATGCAT 60.094 45.455 0.00 0.00 41.91 3.96
412 413 3.184541 GTGTTTGAATGGCTGATGCATC 58.815 45.455 20.14 20.14 41.91 3.91
413 414 2.159352 TGTTTGAATGGCTGATGCATCG 60.159 45.455 21.34 16.36 41.91 3.84
414 415 0.382873 TTGAATGGCTGATGCATCGC 59.617 50.000 25.47 25.47 41.91 4.58
415 416 1.285023 GAATGGCTGATGCATCGCC 59.715 57.895 35.39 35.39 42.60 5.54
416 417 2.453773 GAATGGCTGATGCATCGCCG 62.454 60.000 35.35 23.31 44.04 6.46
419 420 3.879682 GCTGATGCATCGCCGCAA 61.880 61.111 24.01 7.03 46.87 4.85
420 421 2.326897 CTGATGCATCGCCGCAAG 59.673 61.111 21.34 8.51 46.87 4.01
421 422 2.436469 TGATGCATCGCCGCAAGT 60.436 55.556 21.34 0.00 46.87 3.16
422 423 1.985447 CTGATGCATCGCCGCAAGTT 61.985 55.000 21.34 0.00 46.87 2.66
423 424 1.584483 GATGCATCGCCGCAAGTTG 60.584 57.895 11.68 0.00 46.87 3.16
424 425 3.688475 ATGCATCGCCGCAAGTTGC 62.688 57.895 18.18 18.18 46.87 4.17
425 426 4.403137 GCATCGCCGCAAGTTGCA 62.403 61.111 26.56 8.35 45.36 4.08
426 427 2.202388 CATCGCCGCAAGTTGCAG 60.202 61.111 26.56 17.32 45.36 4.41
427 428 4.107051 ATCGCCGCAAGTTGCAGC 62.107 61.111 26.56 24.92 45.36 5.25
433 434 3.025619 GCAAGTTGCAGCGTGACT 58.974 55.556 22.90 1.00 44.26 3.41
434 435 1.356624 GCAAGTTGCAGCGTGACTT 59.643 52.632 22.90 7.76 44.26 3.01
435 436 3.153364 CAAGTTGCAGCGTGACTTG 57.847 52.632 10.84 11.76 42.74 3.16
436 437 0.931662 CAAGTTGCAGCGTGACTTGC 60.932 55.000 17.81 2.55 42.38 4.01
437 438 1.097547 AAGTTGCAGCGTGACTTGCT 61.098 50.000 9.68 0.00 45.31 3.91
438 439 0.249868 AGTTGCAGCGTGACTTGCTA 60.250 50.000 9.68 0.83 41.72 3.49
439 440 0.798776 GTTGCAGCGTGACTTGCTAT 59.201 50.000 9.68 0.00 41.72 2.97
440 441 0.798159 TTGCAGCGTGACTTGCTATG 59.202 50.000 9.68 0.00 41.72 2.23
441 442 1.020861 TGCAGCGTGACTTGCTATGG 61.021 55.000 9.68 0.00 41.72 2.74
442 443 0.740868 GCAGCGTGACTTGCTATGGA 60.741 55.000 2.32 0.00 41.72 3.41
443 444 1.002366 CAGCGTGACTTGCTATGGAC 58.998 55.000 0.00 0.00 41.72 4.02
444 445 0.608130 AGCGTGACTTGCTATGGACA 59.392 50.000 0.00 0.00 41.87 4.02
445 446 1.001974 AGCGTGACTTGCTATGGACAA 59.998 47.619 0.00 0.00 41.87 3.18
452 453 3.340814 CTTGCTATGGACAAGTCACCT 57.659 47.619 2.29 0.00 39.73 4.00
453 454 2.768253 TGCTATGGACAAGTCACCTG 57.232 50.000 2.29 0.00 0.00 4.00
454 455 2.256306 TGCTATGGACAAGTCACCTGA 58.744 47.619 2.29 0.00 0.00 3.86
455 456 2.840038 TGCTATGGACAAGTCACCTGAT 59.160 45.455 2.29 0.00 0.00 2.90
456 457 3.118629 TGCTATGGACAAGTCACCTGATC 60.119 47.826 2.29 0.00 0.00 2.92
457 458 3.133721 GCTATGGACAAGTCACCTGATCT 59.866 47.826 2.29 0.00 0.00 2.75
458 459 3.902881 ATGGACAAGTCACCTGATCTC 57.097 47.619 2.29 0.00 0.00 2.75
459 460 2.894731 TGGACAAGTCACCTGATCTCT 58.105 47.619 2.29 0.00 0.00 3.10
460 461 2.564504 TGGACAAGTCACCTGATCTCTG 59.435 50.000 2.29 0.00 0.00 3.35
461 462 2.564947 GGACAAGTCACCTGATCTCTGT 59.435 50.000 2.29 0.00 0.00 3.41
462 463 3.367910 GGACAAGTCACCTGATCTCTGTC 60.368 52.174 2.29 0.00 0.00 3.51
463 464 2.564947 ACAAGTCACCTGATCTCTGTCC 59.435 50.000 0.00 0.00 0.00 4.02
464 465 1.468985 AGTCACCTGATCTCTGTCCG 58.531 55.000 0.00 0.00 0.00 4.79
465 466 0.179124 GTCACCTGATCTCTGTCCGC 60.179 60.000 0.00 0.00 0.00 5.54
466 467 0.323816 TCACCTGATCTCTGTCCGCT 60.324 55.000 0.00 0.00 0.00 5.52
467 468 0.534412 CACCTGATCTCTGTCCGCTT 59.466 55.000 0.00 0.00 0.00 4.68
468 469 0.534412 ACCTGATCTCTGTCCGCTTG 59.466 55.000 0.00 0.00 0.00 4.01
469 470 0.179089 CCTGATCTCTGTCCGCTTGG 60.179 60.000 0.00 0.00 0.00 3.61
470 471 0.179089 CTGATCTCTGTCCGCTTGGG 60.179 60.000 0.00 0.00 37.02 4.12
471 472 1.144936 GATCTCTGTCCGCTTGGGG 59.855 63.158 0.00 0.00 36.01 4.96
472 473 1.306141 ATCTCTGTCCGCTTGGGGA 60.306 57.895 2.10 2.10 36.01 4.81
473 474 0.909610 ATCTCTGTCCGCTTGGGGAA 60.910 55.000 8.01 0.00 37.96 3.97
474 475 1.125093 TCTCTGTCCGCTTGGGGAAA 61.125 55.000 8.01 2.23 37.96 3.13
475 476 0.250727 CTCTGTCCGCTTGGGGAAAA 60.251 55.000 8.01 0.00 37.96 2.29
476 477 0.250727 TCTGTCCGCTTGGGGAAAAG 60.251 55.000 8.01 9.09 37.96 2.27
477 478 0.250727 CTGTCCGCTTGGGGAAAAGA 60.251 55.000 8.01 0.00 37.96 2.52
478 479 0.250727 TGTCCGCTTGGGGAAAAGAG 60.251 55.000 8.01 0.00 37.96 2.85
479 480 0.036306 GTCCGCTTGGGGAAAAGAGA 59.964 55.000 8.01 0.00 37.96 3.10
480 481 0.324943 TCCGCTTGGGGAAAAGAGAG 59.675 55.000 3.84 0.00 36.01 3.20
481 482 0.324943 CCGCTTGGGGAAAAGAGAGA 59.675 55.000 0.00 0.00 0.00 3.10
482 483 1.677217 CCGCTTGGGGAAAAGAGAGAG 60.677 57.143 0.00 0.00 0.00 3.20
483 484 1.002544 CGCTTGGGGAAAAGAGAGAGT 59.997 52.381 0.00 0.00 0.00 3.24
484 485 2.233922 CGCTTGGGGAAAAGAGAGAGTA 59.766 50.000 0.00 0.00 0.00 2.59
485 486 3.677424 CGCTTGGGGAAAAGAGAGAGTAG 60.677 52.174 0.00 0.00 0.00 2.57
486 487 3.262151 GCTTGGGGAAAAGAGAGAGTAGT 59.738 47.826 0.00 0.00 0.00 2.73
487 488 4.621983 GCTTGGGGAAAAGAGAGAGTAGTC 60.622 50.000 0.00 0.00 0.00 2.59
488 489 3.442076 TGGGGAAAAGAGAGAGTAGTCC 58.558 50.000 0.00 0.00 0.00 3.85
489 490 3.077695 TGGGGAAAAGAGAGAGTAGTCCT 59.922 47.826 0.00 0.00 0.00 3.85
490 491 4.294168 TGGGGAAAAGAGAGAGTAGTCCTA 59.706 45.833 0.00 0.00 0.00 2.94
491 492 5.043281 TGGGGAAAAGAGAGAGTAGTCCTAT 60.043 44.000 0.00 0.00 0.00 2.57
492 493 5.303333 GGGGAAAAGAGAGAGTAGTCCTATG 59.697 48.000 0.00 0.00 0.00 2.23
493 494 6.130569 GGGAAAAGAGAGAGTAGTCCTATGA 58.869 44.000 0.00 0.00 0.00 2.15
494 495 6.780522 GGGAAAAGAGAGAGTAGTCCTATGAT 59.219 42.308 0.00 0.00 0.00 2.45
495 496 7.945664 GGGAAAAGAGAGAGTAGTCCTATGATA 59.054 40.741 0.00 0.00 0.00 2.15
496 497 9.357161 GGAAAAGAGAGAGTAGTCCTATGATAA 57.643 37.037 0.00 0.00 0.00 1.75
528 529 9.442047 AGAAAAAGTATATAGTAGATGCATGCC 57.558 33.333 16.68 0.00 0.00 4.40
529 530 9.442047 GAAAAAGTATATAGTAGATGCATGCCT 57.558 33.333 16.68 4.84 0.00 4.75
533 534 8.415950 AGTATATAGTAGATGCATGCCTATCC 57.584 38.462 16.68 0.09 0.00 2.59
534 535 8.231007 AGTATATAGTAGATGCATGCCTATCCT 58.769 37.037 16.68 8.29 0.00 3.24
535 536 9.521841 GTATATAGTAGATGCATGCCTATCCTA 57.478 37.037 16.68 10.26 0.00 2.94
537 538 7.927683 ATAGTAGATGCATGCCTATCCTAAT 57.072 36.000 16.68 10.41 0.00 1.73
538 539 6.633325 AGTAGATGCATGCCTATCCTAATT 57.367 37.500 16.68 0.00 0.00 1.40
539 540 6.648192 AGTAGATGCATGCCTATCCTAATTC 58.352 40.000 16.68 0.00 0.00 2.17
540 541 4.511527 AGATGCATGCCTATCCTAATTCG 58.488 43.478 16.68 0.00 0.00 3.34
541 542 3.769739 TGCATGCCTATCCTAATTCGT 57.230 42.857 16.68 0.00 0.00 3.85
542 543 4.085357 TGCATGCCTATCCTAATTCGTT 57.915 40.909 16.68 0.00 0.00 3.85
543 544 4.460263 TGCATGCCTATCCTAATTCGTTT 58.540 39.130 16.68 0.00 0.00 3.60
544 545 4.887071 TGCATGCCTATCCTAATTCGTTTT 59.113 37.500 16.68 0.00 0.00 2.43
545 546 5.359576 TGCATGCCTATCCTAATTCGTTTTT 59.640 36.000 16.68 0.00 0.00 1.94
546 547 6.544197 TGCATGCCTATCCTAATTCGTTTTTA 59.456 34.615 16.68 0.00 0.00 1.52
547 548 7.230510 TGCATGCCTATCCTAATTCGTTTTTAT 59.769 33.333 16.68 0.00 0.00 1.40
548 549 8.082242 GCATGCCTATCCTAATTCGTTTTTATT 58.918 33.333 6.36 0.00 0.00 1.40
549 550 9.965824 CATGCCTATCCTAATTCGTTTTTATTT 57.034 29.630 0.00 0.00 0.00 1.40
550 551 9.965824 ATGCCTATCCTAATTCGTTTTTATTTG 57.034 29.630 0.00 0.00 0.00 2.32
551 552 7.918562 TGCCTATCCTAATTCGTTTTTATTTGC 59.081 33.333 0.00 0.00 0.00 3.68
552 553 8.135529 GCCTATCCTAATTCGTTTTTATTTGCT 58.864 33.333 0.00 0.00 0.00 3.91
557 558 9.352784 TCCTAATTCGTTTTTATTTGCTTGATG 57.647 29.630 0.00 0.00 0.00 3.07
558 559 9.352784 CCTAATTCGTTTTTATTTGCTTGATGA 57.647 29.630 0.00 0.00 0.00 2.92
560 561 6.667981 TTCGTTTTTATTTGCTTGATGACG 57.332 33.333 0.00 0.00 0.00 4.35
561 562 4.615121 TCGTTTTTATTTGCTTGATGACGC 59.385 37.500 0.00 0.00 0.00 5.19
562 563 4.201485 CGTTTTTATTTGCTTGATGACGCC 60.201 41.667 0.00 0.00 0.00 5.68
563 564 3.502191 TTTATTTGCTTGATGACGCCC 57.498 42.857 0.00 0.00 0.00 6.13
564 565 2.121291 TATTTGCTTGATGACGCCCA 57.879 45.000 0.00 0.00 0.00 5.36
565 566 0.527565 ATTTGCTTGATGACGCCCAC 59.472 50.000 0.00 0.00 0.00 4.61
566 567 0.821301 TTTGCTTGATGACGCCCACA 60.821 50.000 0.00 0.00 0.00 4.17
567 568 1.514678 TTGCTTGATGACGCCCACAC 61.515 55.000 0.00 0.00 0.00 3.82
568 569 2.690778 GCTTGATGACGCCCACACC 61.691 63.158 0.00 0.00 0.00 4.16
569 570 2.358125 TTGATGACGCCCACACCG 60.358 61.111 0.00 0.00 0.00 4.94
570 571 2.779951 CTTGATGACGCCCACACCGA 62.780 60.000 0.00 0.00 0.00 4.69
571 572 2.813908 GATGACGCCCACACCGAC 60.814 66.667 0.00 0.00 0.00 4.79
572 573 4.735132 ATGACGCCCACACCGACG 62.735 66.667 0.00 0.00 0.00 5.12
578 579 4.289245 CCCACACCGACGGTCGTT 62.289 66.667 26.72 12.52 38.40 3.85
579 580 3.033764 CCACACCGACGGTCGTTG 61.034 66.667 26.72 25.19 38.29 4.10
580 581 2.278989 CACACCGACGGTCGTTGT 60.279 61.111 24.97 24.97 46.26 3.32
581 582 1.008652 CACACCGACGGTCGTTGTA 60.009 57.895 28.76 0.00 43.55 2.41
582 583 1.000233 CACACCGACGGTCGTTGTAG 61.000 60.000 28.76 19.94 43.55 2.74
583 584 1.165907 ACACCGACGGTCGTTGTAGA 61.166 55.000 28.32 0.00 43.57 2.59
584 585 0.453950 CACCGACGGTCGTTGTAGAG 60.454 60.000 26.72 13.33 38.40 2.43
585 586 1.136147 CCGACGGTCGTTGTAGAGG 59.864 63.158 26.72 7.22 38.40 3.69
586 587 1.300971 CCGACGGTCGTTGTAGAGGA 61.301 60.000 26.72 0.00 38.40 3.71
587 588 0.518636 CGACGGTCGTTGTAGAGGAA 59.481 55.000 21.68 0.00 34.72 3.36
588 589 1.069022 CGACGGTCGTTGTAGAGGAAA 60.069 52.381 21.68 0.00 34.72 3.13
589 590 2.605338 CGACGGTCGTTGTAGAGGAAAA 60.605 50.000 21.68 0.00 34.72 2.29
590 591 3.383761 GACGGTCGTTGTAGAGGAAAAA 58.616 45.455 0.00 0.00 0.00 1.94
591 592 3.126073 ACGGTCGTTGTAGAGGAAAAAC 58.874 45.455 0.00 0.00 0.00 2.43
592 593 3.125316 CGGTCGTTGTAGAGGAAAAACA 58.875 45.455 0.00 0.00 0.00 2.83
593 594 3.556775 CGGTCGTTGTAGAGGAAAAACAA 59.443 43.478 0.00 0.00 0.00 2.83
594 595 4.034279 CGGTCGTTGTAGAGGAAAAACAAA 59.966 41.667 0.00 0.00 35.08 2.83
595 596 5.277634 CGGTCGTTGTAGAGGAAAAACAAAT 60.278 40.000 0.00 0.00 35.08 2.32
596 597 5.912955 GGTCGTTGTAGAGGAAAAACAAATG 59.087 40.000 0.00 0.00 35.08 2.32
597 598 6.238538 GGTCGTTGTAGAGGAAAAACAAATGA 60.239 38.462 0.00 0.00 35.08 2.57
598 599 7.190871 GTCGTTGTAGAGGAAAAACAAATGAA 58.809 34.615 0.00 0.00 35.08 2.57
599 600 7.376072 GTCGTTGTAGAGGAAAAACAAATGAAG 59.624 37.037 0.00 0.00 35.08 3.02
600 601 6.142320 CGTTGTAGAGGAAAAACAAATGAAGC 59.858 38.462 0.00 0.00 35.08 3.86
601 602 6.959639 TGTAGAGGAAAAACAAATGAAGCT 57.040 33.333 0.00 0.00 0.00 3.74
602 603 6.738114 TGTAGAGGAAAAACAAATGAAGCTG 58.262 36.000 0.00 0.00 0.00 4.24
603 604 5.859205 AGAGGAAAAACAAATGAAGCTGT 57.141 34.783 0.00 0.00 0.00 4.40
604 605 5.836347 AGAGGAAAAACAAATGAAGCTGTC 58.164 37.500 0.00 0.00 0.00 3.51
605 606 5.595952 AGAGGAAAAACAAATGAAGCTGTCT 59.404 36.000 0.00 0.00 0.00 3.41
606 607 6.772716 AGAGGAAAAACAAATGAAGCTGTCTA 59.227 34.615 0.00 0.00 0.00 2.59
607 608 7.285401 AGAGGAAAAACAAATGAAGCTGTCTAA 59.715 33.333 0.00 0.00 0.00 2.10
608 609 7.781056 AGGAAAAACAAATGAAGCTGTCTAAA 58.219 30.769 0.00 0.00 0.00 1.85
609 610 7.706607 AGGAAAAACAAATGAAGCTGTCTAAAC 59.293 33.333 0.00 0.00 0.00 2.01
624 625 7.012421 AGCTGTCTAAACCTACTTTTTCTTGTG 59.988 37.037 0.00 0.00 0.00 3.33
649 650 1.303948 CCACATGGTGATGCCTCCA 59.696 57.895 0.00 0.00 39.91 3.86
682 683 5.242615 GCCTTGAGAGGAATTTTTCTTCACT 59.757 40.000 0.00 0.00 46.74 3.41
719 720 2.825836 CATTGCGAGTGGGAGGCC 60.826 66.667 0.00 0.00 0.00 5.19
818 819 1.118356 AGCGGCAGAAGAGGATAGGG 61.118 60.000 1.45 0.00 0.00 3.53
819 820 1.369321 CGGCAGAAGAGGATAGGGC 59.631 63.158 0.00 0.00 0.00 5.19
821 822 1.115930 GGCAGAAGAGGATAGGGCGA 61.116 60.000 0.00 0.00 0.00 5.54
822 823 0.972883 GCAGAAGAGGATAGGGCGAT 59.027 55.000 0.00 0.00 0.00 4.58
823 824 1.067213 GCAGAAGAGGATAGGGCGATC 60.067 57.143 0.00 0.00 0.00 3.69
824 825 2.524306 CAGAAGAGGATAGGGCGATCT 58.476 52.381 0.00 0.00 0.00 2.75
825 826 2.230992 CAGAAGAGGATAGGGCGATCTG 59.769 54.545 0.00 0.00 0.00 2.90
826 827 1.548269 GAAGAGGATAGGGCGATCTGG 59.452 57.143 0.00 0.00 0.00 3.86
827 828 0.252012 AGAGGATAGGGCGATCTGGG 60.252 60.000 0.00 0.00 0.00 4.45
828 829 1.229336 AGGATAGGGCGATCTGGGG 60.229 63.158 0.00 0.00 0.00 4.96
829 830 1.229209 GGATAGGGCGATCTGGGGA 60.229 63.158 0.00 0.00 0.00 4.81
830 831 1.545706 GGATAGGGCGATCTGGGGAC 61.546 65.000 0.00 0.00 0.00 4.46
831 832 1.878656 GATAGGGCGATCTGGGGACG 61.879 65.000 0.00 0.00 0.00 4.79
832 833 2.658321 ATAGGGCGATCTGGGGACGT 62.658 60.000 0.00 0.00 0.00 4.34
833 834 4.222847 GGGCGATCTGGGGACGTC 62.223 72.222 7.13 7.13 0.00 4.34
834 835 4.570663 GGCGATCTGGGGACGTCG 62.571 72.222 9.92 0.00 37.17 5.12
888 889 3.891049 ACAAGAGCAAGAAAACAGAGGT 58.109 40.909 0.00 0.00 0.00 3.85
916 917 2.985456 GTCTGCCTGCTGCCTACT 59.015 61.111 0.00 0.00 40.16 2.57
920 932 0.250234 CTGCCTGCTGCCTACTTACA 59.750 55.000 0.00 0.00 40.16 2.41
1073 1085 2.125350 CTCCGAGCTTCACTGCCC 60.125 66.667 0.00 0.00 0.00 5.36
1074 1086 3.672295 CTCCGAGCTTCACTGCCCC 62.672 68.421 0.00 0.00 0.00 5.80
1075 1087 3.710722 CCGAGCTTCACTGCCCCT 61.711 66.667 0.00 0.00 0.00 4.79
1076 1088 2.348998 CGAGCTTCACTGCCCCTT 59.651 61.111 0.00 0.00 0.00 3.95
1077 1089 1.302832 CGAGCTTCACTGCCCCTTT 60.303 57.895 0.00 0.00 0.00 3.11
1078 1090 1.301677 CGAGCTTCACTGCCCCTTTC 61.302 60.000 0.00 0.00 0.00 2.62
1079 1091 0.250901 GAGCTTCACTGCCCCTTTCA 60.251 55.000 0.00 0.00 0.00 2.69
1080 1092 0.538287 AGCTTCACTGCCCCTTTCAC 60.538 55.000 0.00 0.00 0.00 3.18
1081 1093 0.538287 GCTTCACTGCCCCTTTCACT 60.538 55.000 0.00 0.00 0.00 3.41
1082 1094 1.242076 CTTCACTGCCCCTTTCACTG 58.758 55.000 0.00 0.00 0.00 3.66
1083 1095 0.823356 TTCACTGCCCCTTTCACTGC 60.823 55.000 0.00 0.00 0.00 4.40
1084 1096 2.116125 ACTGCCCCTTTCACTGCC 59.884 61.111 0.00 0.00 0.00 4.85
1159 1171 1.028905 CTTTCGGAAAACCAGGTGCA 58.971 50.000 4.53 0.00 0.00 4.57
1447 1459 2.034376 ACCCACCGCGCCATTTTA 59.966 55.556 0.00 0.00 0.00 1.52
1451 1463 1.404851 CCCACCGCGCCATTTTAATTT 60.405 47.619 0.00 0.00 0.00 1.82
1452 1464 2.342179 CCACCGCGCCATTTTAATTTT 58.658 42.857 0.00 0.00 0.00 1.82
1453 1465 2.739379 CCACCGCGCCATTTTAATTTTT 59.261 40.909 0.00 0.00 0.00 1.94
1576 1588 4.080807 TGAAAGAATGCCTCCACGGTAATA 60.081 41.667 0.00 0.00 34.25 0.98
1577 1589 4.497291 AAGAATGCCTCCACGGTAATAA 57.503 40.909 0.00 0.00 34.25 1.40
1604 1616 4.746466 TCTTGAGGGAGGGATATCTCTTC 58.254 47.826 6.55 4.08 34.39 2.87
1748 1760 0.679505 TTCTGCTAACGACCACTGCT 59.320 50.000 0.00 0.00 0.00 4.24
1753 1765 2.028476 TGCTAACGACCACTGCTACATT 60.028 45.455 0.00 0.00 0.00 2.71
1763 1775 2.877786 CACTGCTACATTCCACAACACA 59.122 45.455 0.00 0.00 0.00 3.72
1766 1778 2.741517 TGCTACATTCCACAACACATCG 59.258 45.455 0.00 0.00 0.00 3.84
1770 1782 4.223320 ACATTCCACAACACATCGAAAC 57.777 40.909 0.00 0.00 0.00 2.78
1776 1788 3.064682 CCACAACACATCGAAACTTGACA 59.935 43.478 0.00 0.00 0.00 3.58
2014 2026 6.710597 TGTACTAAGTTTCAGCTATCGGAT 57.289 37.500 0.00 0.00 0.00 4.18
2080 2092 5.468540 AAGGTTCTCTTGGCCATTTTTAC 57.531 39.130 6.09 2.49 33.76 2.01
2095 2107 6.158598 CCATTTTTACCATCACTTTGTCTGG 58.841 40.000 0.00 0.00 34.84 3.86
2111 2123 2.045926 GGCACGTCTGGAATGGCT 60.046 61.111 0.00 0.00 36.08 4.75
2112 2124 1.675641 GGCACGTCTGGAATGGCTT 60.676 57.895 0.00 0.00 36.08 4.35
2567 2684 5.060200 CACGCAGAGATATTGTATGACATCG 59.940 44.000 0.00 0.00 0.00 3.84
2568 2685 4.560427 CGCAGAGATATTGTATGACATCGG 59.440 45.833 0.00 0.00 0.00 4.18
2569 2686 5.619981 CGCAGAGATATTGTATGACATCGGA 60.620 44.000 0.00 0.00 0.00 4.55
2570 2687 5.804473 GCAGAGATATTGTATGACATCGGAG 59.196 44.000 0.00 0.00 0.00 4.63
2571 2688 6.349694 GCAGAGATATTGTATGACATCGGAGA 60.350 42.308 0.00 0.00 45.75 3.71
2572 2689 7.630297 GCAGAGATATTGTATGACATCGGAGAT 60.630 40.741 0.00 0.00 45.12 2.75
2573 2690 8.897752 CAGAGATATTGTATGACATCGGAGATA 58.102 37.037 0.00 0.00 45.12 1.98
2574 2691 9.639563 AGAGATATTGTATGACATCGGAGATAT 57.360 33.333 0.00 0.00 45.12 1.63
2577 2694 9.809096 GATATTGTATGACATCGGAGATATTGT 57.191 33.333 0.00 0.00 45.12 2.71
2580 2697 8.986477 TTGTATGACATCGGAGATATTGTATG 57.014 34.615 0.00 0.00 45.12 2.39
2581 2698 7.547227 TGTATGACATCGGAGATATTGTATGG 58.453 38.462 0.00 0.00 45.12 2.74
2582 2699 4.820897 TGACATCGGAGATATTGTATGGC 58.179 43.478 0.00 0.00 45.12 4.40
2583 2700 4.283212 TGACATCGGAGATATTGTATGGCA 59.717 41.667 0.00 0.00 45.12 4.92
2584 2701 5.046376 TGACATCGGAGATATTGTATGGCAT 60.046 40.000 4.88 4.88 45.12 4.40
2585 2702 5.423015 ACATCGGAGATATTGTATGGCATC 58.577 41.667 1.65 0.00 45.12 3.91
2610 2727 2.417719 GCGAAGAAGTCTCCACACAAT 58.582 47.619 0.00 0.00 0.00 2.71
2647 2768 0.328258 CGGGTGGAAGGTGGAAGAAT 59.672 55.000 0.00 0.00 0.00 2.40
2675 2796 5.195940 CACACATTAGAAATCCCTGGACAT 58.804 41.667 0.00 0.00 0.00 3.06
2729 2850 8.747538 AGACTGTTAATAAAGTTGGTCTGTTT 57.252 30.769 0.00 0.00 32.57 2.83
2800 5661 1.039233 CCCGGCCTTTGCATCAGAAT 61.039 55.000 0.00 0.00 40.13 2.40
2841 5705 7.573710 AGCTGGTAATGATAAACTGACCAATA 58.426 34.615 0.00 0.00 36.56 1.90
2842 5706 8.052748 AGCTGGTAATGATAAACTGACCAATAA 58.947 33.333 0.00 0.00 36.56 1.40
2843 5707 8.850156 GCTGGTAATGATAAACTGACCAATAAT 58.150 33.333 0.00 0.00 36.56 1.28
2868 5736 4.908601 TCTCAAGAATTTCAGTGGGCTA 57.091 40.909 0.00 0.00 0.00 3.93
2871 5739 6.248433 TCTCAAGAATTTCAGTGGGCTATTT 58.752 36.000 0.00 0.00 0.00 1.40
2872 5740 6.721208 TCTCAAGAATTTCAGTGGGCTATTTT 59.279 34.615 0.00 0.00 0.00 1.82
2873 5741 6.690530 TCAAGAATTTCAGTGGGCTATTTTG 58.309 36.000 0.00 0.00 0.00 2.44
2909 5777 5.577554 GGCTAAGAAAGTTCTCGGAGTTTAG 59.422 44.000 4.69 5.01 36.28 1.85
2916 5784 4.884247 AGTTCTCGGAGTTTAGGTTTGAG 58.116 43.478 4.69 0.00 0.00 3.02
2919 5787 6.436532 AGTTCTCGGAGTTTAGGTTTGAGATA 59.563 38.462 4.69 0.00 31.72 1.98
2998 5868 7.068839 ACTCAACAAAGTATATCAGGATCGAGT 59.931 37.037 0.00 0.00 0.00 4.18
3099 5969 2.203788 AGGTCCCCTGAGCGAACA 60.204 61.111 0.00 0.00 43.79 3.18
3156 6039 2.615262 CTAACCTCTCCAGCGCGACC 62.615 65.000 12.10 0.00 0.00 4.79
3265 10174 6.811253 ATAAAACAGAAACACTCGCCATAA 57.189 33.333 0.00 0.00 0.00 1.90
3363 10272 7.769272 TTTTCATGATGTCTGAAAACCAAAC 57.231 32.000 0.00 0.00 43.83 2.93
3402 10311 4.371855 TGTCGCAAACACAAATTTACCA 57.628 36.364 0.00 0.00 31.20 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.267006 CGTCCAGACTGCTGCCAT 59.733 61.111 0.00 0.00 40.91 4.40
3 4 4.687215 GCGTCCAGACTGCTGCCA 62.687 66.667 0.00 0.00 40.91 4.92
9 10 4.680237 TTGCGGGCGTCCAGACTG 62.680 66.667 6.96 0.00 37.28 3.51
10 11 3.883744 CTTTGCGGGCGTCCAGACT 62.884 63.158 6.96 0.00 0.00 3.24
11 12 3.423154 CTTTGCGGGCGTCCAGAC 61.423 66.667 6.96 0.00 0.00 3.51
12 13 3.876589 GACTTTGCGGGCGTCCAGA 62.877 63.158 6.96 0.00 0.00 3.86
13 14 3.423154 GACTTTGCGGGCGTCCAG 61.423 66.667 6.96 0.00 0.00 3.86
15 16 4.699522 AGGACTTTGCGGGCGTCC 62.700 66.667 0.00 0.00 45.88 4.79
16 17 3.119096 GAGGACTTTGCGGGCGTC 61.119 66.667 0.00 0.00 0.00 5.19
17 18 4.699522 GGAGGACTTTGCGGGCGT 62.700 66.667 0.00 0.00 0.00 5.68
18 19 4.394712 AGGAGGACTTTGCGGGCG 62.395 66.667 0.00 0.00 0.00 6.13
19 20 2.436824 GAGGAGGACTTTGCGGGC 60.437 66.667 0.00 0.00 0.00 6.13
20 21 1.219393 GAGAGGAGGACTTTGCGGG 59.781 63.158 0.00 0.00 0.00 6.13
21 22 1.219393 GGAGAGGAGGACTTTGCGG 59.781 63.158 0.00 0.00 0.00 5.69
22 23 1.219393 GGGAGAGGAGGACTTTGCG 59.781 63.158 0.00 0.00 0.00 4.85
23 24 0.912006 AGGGGAGAGGAGGACTTTGC 60.912 60.000 0.00 0.00 0.00 3.68
24 25 1.199615 GAGGGGAGAGGAGGACTTTG 58.800 60.000 0.00 0.00 0.00 2.77
25 26 0.324830 CGAGGGGAGAGGAGGACTTT 60.325 60.000 0.00 0.00 0.00 2.66
26 27 1.308326 CGAGGGGAGAGGAGGACTT 59.692 63.158 0.00 0.00 0.00 3.01
27 28 2.695970 CCGAGGGGAGAGGAGGACT 61.696 68.421 0.00 0.00 34.06 3.85
28 29 2.123640 CCGAGGGGAGAGGAGGAC 60.124 72.222 0.00 0.00 34.06 3.85
29 30 1.812113 AAACCGAGGGGAGAGGAGGA 61.812 60.000 0.00 0.00 36.97 3.71
30 31 1.306226 AAACCGAGGGGAGAGGAGG 60.306 63.158 0.00 0.00 36.97 4.30
31 32 1.901085 CAAACCGAGGGGAGAGGAG 59.099 63.158 0.00 0.00 36.97 3.69
32 33 2.291043 GCAAACCGAGGGGAGAGGA 61.291 63.158 0.00 0.00 36.97 3.71
33 34 1.842381 AAGCAAACCGAGGGGAGAGG 61.842 60.000 0.00 0.00 36.97 3.69
34 35 0.391793 GAAGCAAACCGAGGGGAGAG 60.392 60.000 0.00 0.00 36.97 3.20
35 36 0.836400 AGAAGCAAACCGAGGGGAGA 60.836 55.000 0.00 0.00 36.97 3.71
36 37 0.902531 TAGAAGCAAACCGAGGGGAG 59.097 55.000 0.00 0.00 36.97 4.30
37 38 0.902531 CTAGAAGCAAACCGAGGGGA 59.097 55.000 0.00 0.00 36.97 4.81
38 39 0.613777 ACTAGAAGCAAACCGAGGGG 59.386 55.000 0.00 0.00 40.11 4.79
39 40 2.474410 AACTAGAAGCAAACCGAGGG 57.526 50.000 0.00 0.00 0.00 4.30
40 41 2.095718 GCAAACTAGAAGCAAACCGAGG 60.096 50.000 0.00 0.00 0.00 4.63
41 42 2.095718 GGCAAACTAGAAGCAAACCGAG 60.096 50.000 0.00 0.00 0.00 4.63
42 43 1.877443 GGCAAACTAGAAGCAAACCGA 59.123 47.619 0.00 0.00 0.00 4.69
43 44 1.399727 CGGCAAACTAGAAGCAAACCG 60.400 52.381 0.00 0.00 0.00 4.44
44 45 1.607148 ACGGCAAACTAGAAGCAAACC 59.393 47.619 0.00 0.00 0.00 3.27
45 46 4.477302 TTACGGCAAACTAGAAGCAAAC 57.523 40.909 0.00 0.00 0.00 2.93
46 47 5.502153 TTTTACGGCAAACTAGAAGCAAA 57.498 34.783 0.00 0.00 0.00 3.68
47 48 5.502153 TTTTTACGGCAAACTAGAAGCAA 57.498 34.783 0.00 0.00 0.00 3.91
66 67 3.815401 CGACTTGTCCAGATGTCCTTTTT 59.185 43.478 0.00 0.00 0.00 1.94
67 68 3.071023 TCGACTTGTCCAGATGTCCTTTT 59.929 43.478 0.00 0.00 0.00 2.27
68 69 2.632996 TCGACTTGTCCAGATGTCCTTT 59.367 45.455 0.00 0.00 0.00 3.11
69 70 2.028930 GTCGACTTGTCCAGATGTCCTT 60.029 50.000 8.70 0.00 0.00 3.36
70 71 1.546476 GTCGACTTGTCCAGATGTCCT 59.454 52.381 8.70 0.00 0.00 3.85
71 72 1.732732 CGTCGACTTGTCCAGATGTCC 60.733 57.143 14.70 0.00 0.00 4.02
72 73 1.618861 CGTCGACTTGTCCAGATGTC 58.381 55.000 14.70 0.00 0.00 3.06
73 74 0.243907 CCGTCGACTTGTCCAGATGT 59.756 55.000 14.70 0.00 0.00 3.06
74 75 0.526211 TCCGTCGACTTGTCCAGATG 59.474 55.000 14.70 0.00 0.00 2.90
75 76 1.475403 ATCCGTCGACTTGTCCAGAT 58.525 50.000 14.70 1.79 0.00 2.90
76 77 2.014857 CTATCCGTCGACTTGTCCAGA 58.985 52.381 14.70 0.00 0.00 3.86
77 78 2.014857 TCTATCCGTCGACTTGTCCAG 58.985 52.381 14.70 3.47 0.00 3.86
78 79 2.118313 TCTATCCGTCGACTTGTCCA 57.882 50.000 14.70 0.00 0.00 4.02
79 80 2.358267 ACATCTATCCGTCGACTTGTCC 59.642 50.000 14.70 0.00 0.00 4.02
80 81 3.364062 CACATCTATCCGTCGACTTGTC 58.636 50.000 14.70 0.00 0.00 3.18
81 82 2.099263 CCACATCTATCCGTCGACTTGT 59.901 50.000 14.70 1.34 0.00 3.16
82 83 2.543861 CCCACATCTATCCGTCGACTTG 60.544 54.545 14.70 4.76 0.00 3.16
83 84 1.681793 CCCACATCTATCCGTCGACTT 59.318 52.381 14.70 0.80 0.00 3.01
84 85 1.133884 TCCCACATCTATCCGTCGACT 60.134 52.381 14.70 0.00 0.00 4.18
85 86 1.001597 GTCCCACATCTATCCGTCGAC 60.002 57.143 5.18 5.18 0.00 4.20
86 87 1.133884 AGTCCCACATCTATCCGTCGA 60.134 52.381 0.00 0.00 0.00 4.20
87 88 1.001268 CAGTCCCACATCTATCCGTCG 60.001 57.143 0.00 0.00 0.00 5.12
88 89 2.032620 ACAGTCCCACATCTATCCGTC 58.967 52.381 0.00 0.00 0.00 4.79
89 90 2.160721 ACAGTCCCACATCTATCCGT 57.839 50.000 0.00 0.00 0.00 4.69
90 91 4.560128 CAATACAGTCCCACATCTATCCG 58.440 47.826 0.00 0.00 0.00 4.18
91 92 4.593206 TCCAATACAGTCCCACATCTATCC 59.407 45.833 0.00 0.00 0.00 2.59
92 93 5.808366 TCCAATACAGTCCCACATCTATC 57.192 43.478 0.00 0.00 0.00 2.08
93 94 5.013495 CCATCCAATACAGTCCCACATCTAT 59.987 44.000 0.00 0.00 0.00 1.98
94 95 4.347876 CCATCCAATACAGTCCCACATCTA 59.652 45.833 0.00 0.00 0.00 1.98
95 96 3.137176 CCATCCAATACAGTCCCACATCT 59.863 47.826 0.00 0.00 0.00 2.90
96 97 3.480470 CCATCCAATACAGTCCCACATC 58.520 50.000 0.00 0.00 0.00 3.06
97 98 2.423373 GCCATCCAATACAGTCCCACAT 60.423 50.000 0.00 0.00 0.00 3.21
98 99 1.064758 GCCATCCAATACAGTCCCACA 60.065 52.381 0.00 0.00 0.00 4.17
99 100 1.064758 TGCCATCCAATACAGTCCCAC 60.065 52.381 0.00 0.00 0.00 4.61
100 101 1.294041 TGCCATCCAATACAGTCCCA 58.706 50.000 0.00 0.00 0.00 4.37
101 102 2.435372 TTGCCATCCAATACAGTCCC 57.565 50.000 0.00 0.00 0.00 4.46
102 103 3.509575 TGTTTTGCCATCCAATACAGTCC 59.490 43.478 0.00 0.00 39.43 3.85
103 104 4.782019 TGTTTTGCCATCCAATACAGTC 57.218 40.909 0.00 0.00 39.43 3.51
104 105 4.527816 ACATGTTTTGCCATCCAATACAGT 59.472 37.500 0.00 2.68 44.64 3.55
105 106 5.075858 ACATGTTTTGCCATCCAATACAG 57.924 39.130 0.00 2.23 44.64 2.74
106 107 5.477510 GAACATGTTTTGCCATCCAATACA 58.522 37.500 13.36 2.71 45.20 2.29
107 108 4.562394 CGAACATGTTTTGCCATCCAATAC 59.438 41.667 13.36 0.00 36.36 1.89
108 109 4.460731 TCGAACATGTTTTGCCATCCAATA 59.539 37.500 13.36 0.00 32.49 1.90
109 110 3.257873 TCGAACATGTTTTGCCATCCAAT 59.742 39.130 13.36 0.00 32.49 3.16
110 111 2.625314 TCGAACATGTTTTGCCATCCAA 59.375 40.909 13.36 0.00 0.00 3.53
111 112 2.234143 TCGAACATGTTTTGCCATCCA 58.766 42.857 13.36 0.00 0.00 3.41
112 113 3.296322 TTCGAACATGTTTTGCCATCC 57.704 42.857 13.36 0.00 0.00 3.51
113 114 5.512788 CACTATTCGAACATGTTTTGCCATC 59.487 40.000 13.36 0.00 0.00 3.51
114 115 5.401550 CACTATTCGAACATGTTTTGCCAT 58.598 37.500 13.36 6.94 0.00 4.40
115 116 4.793071 CACTATTCGAACATGTTTTGCCA 58.207 39.130 13.36 0.00 0.00 4.92
116 117 3.608073 GCACTATTCGAACATGTTTTGCC 59.392 43.478 13.36 0.00 0.00 4.52
117 118 4.475944 AGCACTATTCGAACATGTTTTGC 58.524 39.130 13.36 12.04 0.00 3.68
118 119 8.315554 GAATAGCACTATTCGAACATGTTTTG 57.684 34.615 13.36 8.89 41.12 2.44
130 131 8.129840 ACATATACGATCCGAATAGCACTATTC 58.870 37.037 16.96 16.96 44.80 1.75
131 132 7.915923 CACATATACGATCCGAATAGCACTATT 59.084 37.037 2.56 2.56 38.38 1.73
132 133 7.418408 CACATATACGATCCGAATAGCACTAT 58.582 38.462 0.00 0.00 0.00 2.12
133 134 6.677187 GCACATATACGATCCGAATAGCACTA 60.677 42.308 0.00 0.00 0.00 2.74
134 135 5.641709 CACATATACGATCCGAATAGCACT 58.358 41.667 0.00 0.00 0.00 4.40
135 136 4.265556 GCACATATACGATCCGAATAGCAC 59.734 45.833 0.00 0.00 0.00 4.40
136 137 4.421058 GCACATATACGATCCGAATAGCA 58.579 43.478 0.00 0.00 0.00 3.49
137 138 3.482472 CGCACATATACGATCCGAATAGC 59.518 47.826 0.00 0.00 0.00 2.97
138 139 4.905269 TCGCACATATACGATCCGAATAG 58.095 43.478 0.00 0.00 32.45 1.73
139 140 4.950434 TCGCACATATACGATCCGAATA 57.050 40.909 0.00 0.00 32.45 1.75
140 141 3.842732 TCGCACATATACGATCCGAAT 57.157 42.857 0.00 0.00 32.45 3.34
141 142 3.842732 ATCGCACATATACGATCCGAA 57.157 42.857 0.00 0.00 45.35 4.30
147 148 5.204409 ACCCTTAAATCGCACATATACGA 57.796 39.130 0.00 0.00 43.33 3.43
148 149 4.387862 GGACCCTTAAATCGCACATATACG 59.612 45.833 0.00 0.00 0.00 3.06
149 150 5.178809 GTGGACCCTTAAATCGCACATATAC 59.821 44.000 0.00 0.00 0.00 1.47
150 151 5.302360 GTGGACCCTTAAATCGCACATATA 58.698 41.667 0.00 0.00 0.00 0.86
151 152 4.134563 GTGGACCCTTAAATCGCACATAT 58.865 43.478 0.00 0.00 0.00 1.78
152 153 3.537580 GTGGACCCTTAAATCGCACATA 58.462 45.455 0.00 0.00 0.00 2.29
153 154 2.365582 GTGGACCCTTAAATCGCACAT 58.634 47.619 0.00 0.00 0.00 3.21
154 155 1.816074 GTGGACCCTTAAATCGCACA 58.184 50.000 0.00 0.00 0.00 4.57
155 156 0.725117 CGTGGACCCTTAAATCGCAC 59.275 55.000 0.00 0.00 0.00 5.34
156 157 0.322322 ACGTGGACCCTTAAATCGCA 59.678 50.000 0.00 0.00 0.00 5.10
157 158 1.004595 GACGTGGACCCTTAAATCGC 58.995 55.000 0.00 0.00 0.00 4.58
158 159 2.373540 TGACGTGGACCCTTAAATCG 57.626 50.000 0.00 0.00 0.00 3.34
159 160 4.320870 TCTTTGACGTGGACCCTTAAATC 58.679 43.478 0.00 0.00 0.00 2.17
160 161 4.360951 TCTTTGACGTGGACCCTTAAAT 57.639 40.909 0.00 0.00 0.00 1.40
161 162 3.842007 TCTTTGACGTGGACCCTTAAA 57.158 42.857 0.00 0.00 0.00 1.52
162 163 5.395990 GGATATCTTTGACGTGGACCCTTAA 60.396 44.000 0.00 0.00 0.00 1.85
163 164 4.100498 GGATATCTTTGACGTGGACCCTTA 59.900 45.833 0.00 0.00 0.00 2.69
164 165 3.118371 GGATATCTTTGACGTGGACCCTT 60.118 47.826 0.00 0.00 0.00 3.95
165 166 2.434702 GGATATCTTTGACGTGGACCCT 59.565 50.000 0.00 0.00 0.00 4.34
166 167 2.434702 AGGATATCTTTGACGTGGACCC 59.565 50.000 0.00 0.00 0.00 4.46
167 168 3.821421 AGGATATCTTTGACGTGGACC 57.179 47.619 0.00 0.00 0.00 4.46
168 169 5.749109 CAGTTAGGATATCTTTGACGTGGAC 59.251 44.000 0.00 0.00 0.00 4.02
169 170 5.655090 TCAGTTAGGATATCTTTGACGTGGA 59.345 40.000 0.00 0.00 0.00 4.02
170 171 5.749109 GTCAGTTAGGATATCTTTGACGTGG 59.251 44.000 0.00 0.00 0.00 4.94
171 172 6.473778 CAGTCAGTTAGGATATCTTTGACGTG 59.526 42.308 10.69 7.39 36.31 4.49
172 173 6.405953 CCAGTCAGTTAGGATATCTTTGACGT 60.406 42.308 10.69 0.00 36.31 4.34
173 174 5.980116 CCAGTCAGTTAGGATATCTTTGACG 59.020 44.000 10.69 7.33 36.31 4.35
174 175 7.113658 TCCAGTCAGTTAGGATATCTTTGAC 57.886 40.000 9.14 9.14 33.84 3.18
175 176 7.733773 TTCCAGTCAGTTAGGATATCTTTGA 57.266 36.000 2.05 0.00 0.00 2.69
176 177 8.792830 TTTTCCAGTCAGTTAGGATATCTTTG 57.207 34.615 2.05 0.00 0.00 2.77
177 178 9.981460 ATTTTTCCAGTCAGTTAGGATATCTTT 57.019 29.630 2.05 0.00 0.00 2.52
178 179 9.981460 AATTTTTCCAGTCAGTTAGGATATCTT 57.019 29.630 2.05 0.00 0.00 2.40
205 206 9.265901 GCATTGTATACTGAGTGAAGTGATTAT 57.734 33.333 4.17 0.00 0.00 1.28
206 207 7.710907 GGCATTGTATACTGAGTGAAGTGATTA 59.289 37.037 4.17 0.00 0.00 1.75
207 208 6.540189 GGCATTGTATACTGAGTGAAGTGATT 59.460 38.462 4.17 0.00 0.00 2.57
208 209 6.051717 GGCATTGTATACTGAGTGAAGTGAT 58.948 40.000 4.17 0.00 0.00 3.06
209 210 5.046663 TGGCATTGTATACTGAGTGAAGTGA 60.047 40.000 4.17 0.00 0.00 3.41
210 211 5.178061 TGGCATTGTATACTGAGTGAAGTG 58.822 41.667 4.17 0.00 0.00 3.16
211 212 5.420725 TGGCATTGTATACTGAGTGAAGT 57.579 39.130 4.17 0.00 0.00 3.01
212 213 6.932356 AATGGCATTGTATACTGAGTGAAG 57.068 37.500 12.82 0.00 0.00 3.02
213 214 6.658816 ACAAATGGCATTGTATACTGAGTGAA 59.341 34.615 14.47 0.00 41.56 3.18
214 215 6.179756 ACAAATGGCATTGTATACTGAGTGA 58.820 36.000 14.47 0.00 41.56 3.41
215 216 6.441093 ACAAATGGCATTGTATACTGAGTG 57.559 37.500 14.47 6.58 41.56 3.51
224 225 5.586643 TCTGCGTTATACAAATGGCATTGTA 59.413 36.000 14.47 16.90 46.53 2.41
225 226 4.397730 TCTGCGTTATACAAATGGCATTGT 59.602 37.500 14.47 15.38 45.14 2.71
226 227 4.734854 GTCTGCGTTATACAAATGGCATTG 59.265 41.667 14.47 10.40 36.37 2.82
227 228 4.397730 TGTCTGCGTTATACAAATGGCATT 59.602 37.500 6.96 6.96 0.00 3.56
228 229 3.944650 TGTCTGCGTTATACAAATGGCAT 59.055 39.130 0.00 0.00 0.00 4.40
229 230 3.339141 TGTCTGCGTTATACAAATGGCA 58.661 40.909 0.00 0.00 0.00 4.92
230 231 3.242739 CCTGTCTGCGTTATACAAATGGC 60.243 47.826 0.00 0.00 0.00 4.40
231 232 3.938963 ACCTGTCTGCGTTATACAAATGG 59.061 43.478 0.00 0.00 0.00 3.16
232 233 5.545658 AACCTGTCTGCGTTATACAAATG 57.454 39.130 0.00 0.00 0.00 2.32
233 234 5.472137 ACAAACCTGTCTGCGTTATACAAAT 59.528 36.000 0.00 0.00 0.00 2.32
234 235 4.817464 ACAAACCTGTCTGCGTTATACAAA 59.183 37.500 0.00 0.00 0.00 2.83
235 236 4.382291 ACAAACCTGTCTGCGTTATACAA 58.618 39.130 0.00 0.00 0.00 2.41
236 237 3.997762 ACAAACCTGTCTGCGTTATACA 58.002 40.909 0.00 0.00 0.00 2.29
237 238 6.091713 ACAATACAAACCTGTCTGCGTTATAC 59.908 38.462 0.00 0.00 36.96 1.47
238 239 6.167685 ACAATACAAACCTGTCTGCGTTATA 58.832 36.000 0.00 0.00 36.96 0.98
239 240 5.001232 ACAATACAAACCTGTCTGCGTTAT 58.999 37.500 0.00 0.00 36.96 1.89
240 241 4.382291 ACAATACAAACCTGTCTGCGTTA 58.618 39.130 0.00 0.00 36.96 3.18
241 242 3.211045 ACAATACAAACCTGTCTGCGTT 58.789 40.909 0.00 0.00 36.96 4.84
242 243 2.846193 ACAATACAAACCTGTCTGCGT 58.154 42.857 0.00 0.00 36.96 5.24
243 244 3.896648 AACAATACAAACCTGTCTGCG 57.103 42.857 0.00 0.00 36.96 5.18
244 245 6.017440 TCAGTTAACAATACAAACCTGTCTGC 60.017 38.462 8.61 0.00 36.96 4.26
245 246 7.226720 AGTCAGTTAACAATACAAACCTGTCTG 59.773 37.037 8.61 0.00 36.96 3.51
246 247 7.226720 CAGTCAGTTAACAATACAAACCTGTCT 59.773 37.037 8.61 0.00 36.96 3.41
247 248 7.225931 TCAGTCAGTTAACAATACAAACCTGTC 59.774 37.037 8.61 0.00 36.96 3.51
248 249 7.051623 TCAGTCAGTTAACAATACAAACCTGT 58.948 34.615 8.61 0.00 39.75 4.00
249 250 7.490962 TCAGTCAGTTAACAATACAAACCTG 57.509 36.000 8.61 1.28 0.00 4.00
250 251 8.514330 TTTCAGTCAGTTAACAATACAAACCT 57.486 30.769 8.61 0.00 0.00 3.50
259 260 9.554395 TCAGTCATTATTTCAGTCAGTTAACAA 57.446 29.630 8.61 0.00 0.00 2.83
260 261 9.554395 TTCAGTCATTATTTCAGTCAGTTAACA 57.446 29.630 8.61 0.00 0.00 2.41
264 265 8.070171 CGTTTTCAGTCATTATTTCAGTCAGTT 58.930 33.333 0.00 0.00 0.00 3.16
265 266 7.441157 TCGTTTTCAGTCATTATTTCAGTCAGT 59.559 33.333 0.00 0.00 0.00 3.41
266 267 7.796838 TCGTTTTCAGTCATTATTTCAGTCAG 58.203 34.615 0.00 0.00 0.00 3.51
267 268 7.571244 GCTCGTTTTCAGTCATTATTTCAGTCA 60.571 37.037 0.00 0.00 0.00 3.41
268 269 6.738649 GCTCGTTTTCAGTCATTATTTCAGTC 59.261 38.462 0.00 0.00 0.00 3.51
269 270 6.428159 AGCTCGTTTTCAGTCATTATTTCAGT 59.572 34.615 0.00 0.00 0.00 3.41
270 271 6.740002 CAGCTCGTTTTCAGTCATTATTTCAG 59.260 38.462 0.00 0.00 0.00 3.02
271 272 6.426633 TCAGCTCGTTTTCAGTCATTATTTCA 59.573 34.615 0.00 0.00 0.00 2.69
272 273 6.831769 TCAGCTCGTTTTCAGTCATTATTTC 58.168 36.000 0.00 0.00 0.00 2.17
273 274 6.801539 TCAGCTCGTTTTCAGTCATTATTT 57.198 33.333 0.00 0.00 0.00 1.40
274 275 6.801539 TTCAGCTCGTTTTCAGTCATTATT 57.198 33.333 0.00 0.00 0.00 1.40
275 276 6.801539 TTTCAGCTCGTTTTCAGTCATTAT 57.198 33.333 0.00 0.00 0.00 1.28
276 277 6.612247 TTTTCAGCTCGTTTTCAGTCATTA 57.388 33.333 0.00 0.00 0.00 1.90
277 278 5.499139 TTTTCAGCTCGTTTTCAGTCATT 57.501 34.783 0.00 0.00 0.00 2.57
278 279 5.066505 AGTTTTTCAGCTCGTTTTCAGTCAT 59.933 36.000 0.00 0.00 0.00 3.06
279 280 4.394920 AGTTTTTCAGCTCGTTTTCAGTCA 59.605 37.500 0.00 0.00 0.00 3.41
280 281 4.909894 AGTTTTTCAGCTCGTTTTCAGTC 58.090 39.130 0.00 0.00 0.00 3.51
281 282 4.965119 AGTTTTTCAGCTCGTTTTCAGT 57.035 36.364 0.00 0.00 0.00 3.41
282 283 6.129352 GCATTAGTTTTTCAGCTCGTTTTCAG 60.129 38.462 0.00 0.00 0.00 3.02
283 284 5.685511 GCATTAGTTTTTCAGCTCGTTTTCA 59.314 36.000 0.00 0.00 0.00 2.69
284 285 5.915196 AGCATTAGTTTTTCAGCTCGTTTTC 59.085 36.000 0.00 0.00 0.00 2.29
285 286 5.831997 AGCATTAGTTTTTCAGCTCGTTTT 58.168 33.333 0.00 0.00 0.00 2.43
286 287 5.438761 AGCATTAGTTTTTCAGCTCGTTT 57.561 34.783 0.00 0.00 0.00 3.60
287 288 5.035784 GAGCATTAGTTTTTCAGCTCGTT 57.964 39.130 0.00 0.00 39.04 3.85
288 289 4.670227 GAGCATTAGTTTTTCAGCTCGT 57.330 40.909 0.00 0.00 39.04 4.18
290 291 4.670227 ACGAGCATTAGTTTTTCAGCTC 57.330 40.909 0.00 0.00 43.61 4.09
291 292 5.438761 AAACGAGCATTAGTTTTTCAGCT 57.561 34.783 0.00 0.00 37.27 4.24
292 293 4.318332 CGAAACGAGCATTAGTTTTTCAGC 59.682 41.667 0.00 0.00 40.24 4.26
293 294 4.846137 CCGAAACGAGCATTAGTTTTTCAG 59.154 41.667 0.00 0.00 40.24 3.02
294 295 4.778904 CCGAAACGAGCATTAGTTTTTCA 58.221 39.130 0.00 0.00 40.24 2.69
295 296 3.602489 GCCGAAACGAGCATTAGTTTTTC 59.398 43.478 0.00 0.00 40.24 2.29
296 297 3.252458 AGCCGAAACGAGCATTAGTTTTT 59.748 39.130 0.00 0.00 40.24 1.94
297 298 2.812011 AGCCGAAACGAGCATTAGTTTT 59.188 40.909 0.00 0.00 40.24 2.43
298 299 2.159627 CAGCCGAAACGAGCATTAGTTT 59.840 45.455 0.00 0.00 42.50 2.66
299 300 1.732259 CAGCCGAAACGAGCATTAGTT 59.268 47.619 0.00 0.00 0.00 2.24
300 301 1.337823 ACAGCCGAAACGAGCATTAGT 60.338 47.619 0.00 0.00 0.00 2.24
301 302 1.061131 CACAGCCGAAACGAGCATTAG 59.939 52.381 0.00 0.00 0.00 1.73
302 303 1.075542 CACAGCCGAAACGAGCATTA 58.924 50.000 0.00 0.00 0.00 1.90
303 304 1.868997 CACAGCCGAAACGAGCATT 59.131 52.632 0.00 0.00 0.00 3.56
304 305 2.680913 GCACAGCCGAAACGAGCAT 61.681 57.895 0.00 0.00 0.00 3.79
305 306 3.345808 GCACAGCCGAAACGAGCA 61.346 61.111 0.00 0.00 0.00 4.26
306 307 3.044305 AGCACAGCCGAAACGAGC 61.044 61.111 0.00 0.00 0.00 5.03
307 308 2.856032 CAGCACAGCCGAAACGAG 59.144 61.111 0.00 0.00 0.00 4.18
308 309 3.345808 GCAGCACAGCCGAAACGA 61.346 61.111 0.00 0.00 0.00 3.85
309 310 4.724697 CGCAGCACAGCCGAAACG 62.725 66.667 0.00 0.00 0.00 3.60
322 323 4.147449 TCGGTCCATCCAGCGCAG 62.147 66.667 11.47 0.00 37.20 5.18
323 324 4.147449 CTCGGTCCATCCAGCGCA 62.147 66.667 11.47 0.00 37.20 6.09
326 327 4.148825 ACGCTCGGTCCATCCAGC 62.149 66.667 0.00 0.00 37.16 4.85
327 328 1.663379 TACACGCTCGGTCCATCCAG 61.663 60.000 0.00 0.00 35.57 3.86
328 329 1.252215 TTACACGCTCGGTCCATCCA 61.252 55.000 0.00 0.00 35.57 3.41
329 330 0.527817 CTTACACGCTCGGTCCATCC 60.528 60.000 0.00 0.00 0.00 3.51
330 331 0.172803 ACTTACACGCTCGGTCCATC 59.827 55.000 0.00 0.00 0.00 3.51
331 332 0.108804 CACTTACACGCTCGGTCCAT 60.109 55.000 0.00 0.00 0.00 3.41
332 333 1.287815 CACTTACACGCTCGGTCCA 59.712 57.895 0.00 0.00 0.00 4.02
333 334 1.007336 CACACTTACACGCTCGGTCC 61.007 60.000 0.00 0.00 0.00 4.46
334 335 1.007336 CCACACTTACACGCTCGGTC 61.007 60.000 0.00 0.00 0.00 4.79
335 336 1.006571 CCACACTTACACGCTCGGT 60.007 57.895 0.00 0.00 0.00 4.69
336 337 1.736645 CCCACACTTACACGCTCGG 60.737 63.158 0.00 0.00 0.00 4.63
337 338 1.736645 CCCCACACTTACACGCTCG 60.737 63.158 0.00 0.00 0.00 5.03
338 339 0.949105 CACCCCACACTTACACGCTC 60.949 60.000 0.00 0.00 0.00 5.03
339 340 1.070786 CACCCCACACTTACACGCT 59.929 57.895 0.00 0.00 0.00 5.07
340 341 0.816421 AACACCCCACACTTACACGC 60.816 55.000 0.00 0.00 0.00 5.34
341 342 1.670791 AAACACCCCACACTTACACG 58.329 50.000 0.00 0.00 0.00 4.49
342 343 3.193903 ACAAAAACACCCCACACTTACAC 59.806 43.478 0.00 0.00 0.00 2.90
343 344 3.432378 ACAAAAACACCCCACACTTACA 58.568 40.909 0.00 0.00 0.00 2.41
344 345 4.158949 AGAACAAAAACACCCCACACTTAC 59.841 41.667 0.00 0.00 0.00 2.34
345 346 4.158764 CAGAACAAAAACACCCCACACTTA 59.841 41.667 0.00 0.00 0.00 2.24
346 347 3.056179 CAGAACAAAAACACCCCACACTT 60.056 43.478 0.00 0.00 0.00 3.16
347 348 2.495669 CAGAACAAAAACACCCCACACT 59.504 45.455 0.00 0.00 0.00 3.55
348 349 2.418060 CCAGAACAAAAACACCCCACAC 60.418 50.000 0.00 0.00 0.00 3.82
349 350 1.827969 CCAGAACAAAAACACCCCACA 59.172 47.619 0.00 0.00 0.00 4.17
350 351 2.104170 TCCAGAACAAAAACACCCCAC 58.896 47.619 0.00 0.00 0.00 4.61
351 352 2.534042 TCCAGAACAAAAACACCCCA 57.466 45.000 0.00 0.00 0.00 4.96
352 353 2.037121 CCATCCAGAACAAAAACACCCC 59.963 50.000 0.00 0.00 0.00 4.95
353 354 2.547855 GCCATCCAGAACAAAAACACCC 60.548 50.000 0.00 0.00 0.00 4.61
354 355 2.365293 AGCCATCCAGAACAAAAACACC 59.635 45.455 0.00 0.00 0.00 4.16
355 356 3.181476 ACAGCCATCCAGAACAAAAACAC 60.181 43.478 0.00 0.00 0.00 3.32
356 357 3.030291 ACAGCCATCCAGAACAAAAACA 58.970 40.909 0.00 0.00 0.00 2.83
357 358 3.733443 ACAGCCATCCAGAACAAAAAC 57.267 42.857 0.00 0.00 0.00 2.43
358 359 3.450457 ACAACAGCCATCCAGAACAAAAA 59.550 39.130 0.00 0.00 0.00 1.94
359 360 3.030291 ACAACAGCCATCCAGAACAAAA 58.970 40.909 0.00 0.00 0.00 2.44
360 361 2.622942 GACAACAGCCATCCAGAACAAA 59.377 45.455 0.00 0.00 0.00 2.83
361 362 2.229792 GACAACAGCCATCCAGAACAA 58.770 47.619 0.00 0.00 0.00 2.83
362 363 1.545428 GGACAACAGCCATCCAGAACA 60.545 52.381 0.00 0.00 32.35 3.18
363 364 1.168714 GGACAACAGCCATCCAGAAC 58.831 55.000 0.00 0.00 32.35 3.01
364 365 0.321564 CGGACAACAGCCATCCAGAA 60.322 55.000 0.00 0.00 32.35 3.02
365 366 1.296392 CGGACAACAGCCATCCAGA 59.704 57.895 0.00 0.00 32.35 3.86
366 367 0.606401 AACGGACAACAGCCATCCAG 60.606 55.000 0.00 0.00 32.35 3.86
367 368 0.888736 CAACGGACAACAGCCATCCA 60.889 55.000 0.00 0.00 32.35 3.41
368 369 1.586154 CCAACGGACAACAGCCATCC 61.586 60.000 0.00 0.00 0.00 3.51
369 370 0.605319 TCCAACGGACAACAGCCATC 60.605 55.000 0.00 0.00 0.00 3.51
370 371 0.038166 ATCCAACGGACAACAGCCAT 59.962 50.000 0.00 0.00 32.98 4.40
371 372 0.888736 CATCCAACGGACAACAGCCA 60.889 55.000 0.00 0.00 32.98 4.75
372 373 1.586154 CCATCCAACGGACAACAGCC 61.586 60.000 0.00 0.00 32.98 4.85
373 374 0.889186 ACCATCCAACGGACAACAGC 60.889 55.000 0.00 0.00 32.98 4.40
374 375 0.874390 CACCATCCAACGGACAACAG 59.126 55.000 0.00 0.00 32.98 3.16
375 376 0.181587 ACACCATCCAACGGACAACA 59.818 50.000 0.00 0.00 32.98 3.33
376 377 1.314730 AACACCATCCAACGGACAAC 58.685 50.000 0.00 0.00 32.98 3.32
377 378 1.678627 CAAACACCATCCAACGGACAA 59.321 47.619 0.00 0.00 32.98 3.18
378 379 1.134068 TCAAACACCATCCAACGGACA 60.134 47.619 0.00 0.00 32.98 4.02
379 380 1.600023 TCAAACACCATCCAACGGAC 58.400 50.000 0.00 0.00 32.98 4.79
380 381 2.350057 TTCAAACACCATCCAACGGA 57.650 45.000 0.00 0.00 35.55 4.69
381 382 2.352617 CCATTCAAACACCATCCAACGG 60.353 50.000 0.00 0.00 0.00 4.44
382 383 2.926159 GCCATTCAAACACCATCCAACG 60.926 50.000 0.00 0.00 0.00 4.10
383 384 2.299867 AGCCATTCAAACACCATCCAAC 59.700 45.455 0.00 0.00 0.00 3.77
384 385 2.299582 CAGCCATTCAAACACCATCCAA 59.700 45.455 0.00 0.00 0.00 3.53
385 386 1.894466 CAGCCATTCAAACACCATCCA 59.106 47.619 0.00 0.00 0.00 3.41
386 387 2.170166 TCAGCCATTCAAACACCATCC 58.830 47.619 0.00 0.00 0.00 3.51
387 388 3.777478 CATCAGCCATTCAAACACCATC 58.223 45.455 0.00 0.00 0.00 3.51
388 389 2.093869 GCATCAGCCATTCAAACACCAT 60.094 45.455 0.00 0.00 33.58 3.55
389 390 1.273048 GCATCAGCCATTCAAACACCA 59.727 47.619 0.00 0.00 33.58 4.17
390 391 1.273048 TGCATCAGCCATTCAAACACC 59.727 47.619 0.00 0.00 41.13 4.16
391 392 2.728690 TGCATCAGCCATTCAAACAC 57.271 45.000 0.00 0.00 41.13 3.32
392 393 2.159352 CGATGCATCAGCCATTCAAACA 60.159 45.455 25.70 0.00 41.13 2.83
393 394 2.456989 CGATGCATCAGCCATTCAAAC 58.543 47.619 25.70 0.00 41.13 2.93
394 395 1.202325 GCGATGCATCAGCCATTCAAA 60.202 47.619 25.70 0.00 41.13 2.69
395 396 0.382873 GCGATGCATCAGCCATTCAA 59.617 50.000 25.70 0.00 41.13 2.69
396 397 1.449726 GGCGATGCATCAGCCATTCA 61.450 55.000 36.21 0.00 42.19 2.57
397 398 1.285023 GGCGATGCATCAGCCATTC 59.715 57.895 36.21 20.92 42.19 2.67
398 399 2.549198 CGGCGATGCATCAGCCATT 61.549 57.895 37.69 7.51 42.49 3.16
399 400 2.976350 CGGCGATGCATCAGCCAT 60.976 61.111 37.69 8.20 42.49 4.40
402 403 3.802008 CTTGCGGCGATGCATCAGC 62.802 63.158 25.70 25.57 45.78 4.26
403 404 1.985447 AACTTGCGGCGATGCATCAG 61.985 55.000 25.70 18.41 45.78 2.90
404 405 2.039974 AACTTGCGGCGATGCATCA 61.040 52.632 25.70 4.13 45.78 3.07
405 406 1.584483 CAACTTGCGGCGATGCATC 60.584 57.895 17.10 17.10 45.78 3.91
406 407 2.486504 CAACTTGCGGCGATGCAT 59.513 55.556 12.98 0.00 45.78 3.96
407 408 4.403137 GCAACTTGCGGCGATGCA 62.403 61.111 12.98 0.00 44.61 3.96
416 417 0.931662 CAAGTCACGCTGCAACTTGC 60.932 55.000 19.71 6.82 42.23 4.01
417 418 3.153364 CAAGTCACGCTGCAACTTG 57.847 52.632 18.76 18.76 42.60 3.16
418 419 1.097547 AGCAAGTCACGCTGCAACTT 61.098 50.000 7.56 3.41 38.60 2.66
419 420 0.249868 TAGCAAGTCACGCTGCAACT 60.250 50.000 7.56 0.00 40.73 3.16
420 421 0.798776 ATAGCAAGTCACGCTGCAAC 59.201 50.000 7.56 0.00 40.73 4.17
421 422 0.798159 CATAGCAAGTCACGCTGCAA 59.202 50.000 7.56 0.00 40.73 4.08
422 423 1.020861 CCATAGCAAGTCACGCTGCA 61.021 55.000 7.56 0.00 40.73 4.41
423 424 0.740868 TCCATAGCAAGTCACGCTGC 60.741 55.000 0.00 0.00 40.73 5.25
424 425 1.002366 GTCCATAGCAAGTCACGCTG 58.998 55.000 0.00 0.00 40.73 5.18
425 426 0.608130 TGTCCATAGCAAGTCACGCT 59.392 50.000 0.00 0.00 43.62 5.07
426 427 1.394917 CTTGTCCATAGCAAGTCACGC 59.605 52.381 0.00 0.00 38.68 5.34
432 433 3.005554 CAGGTGACTTGTCCATAGCAAG 58.994 50.000 3.81 3.81 46.23 4.01
433 434 2.637382 TCAGGTGACTTGTCCATAGCAA 59.363 45.455 0.00 0.00 40.21 3.91
434 435 2.256306 TCAGGTGACTTGTCCATAGCA 58.744 47.619 0.00 0.00 40.21 3.49
435 436 3.133721 AGATCAGGTGACTTGTCCATAGC 59.866 47.826 0.00 0.00 40.21 2.97
436 437 4.648762 AGAGATCAGGTGACTTGTCCATAG 59.351 45.833 0.00 0.00 40.21 2.23
437 438 4.403752 CAGAGATCAGGTGACTTGTCCATA 59.596 45.833 0.00 0.00 40.21 2.74
438 439 3.197333 CAGAGATCAGGTGACTTGTCCAT 59.803 47.826 0.00 0.00 40.21 3.41
439 440 2.564504 CAGAGATCAGGTGACTTGTCCA 59.435 50.000 0.00 0.00 40.21 4.02
440 441 2.564947 ACAGAGATCAGGTGACTTGTCC 59.435 50.000 0.00 0.00 40.21 4.02
441 442 3.367910 GGACAGAGATCAGGTGACTTGTC 60.368 52.174 0.00 0.00 40.21 3.18
442 443 2.564947 GGACAGAGATCAGGTGACTTGT 59.435 50.000 0.00 0.00 40.21 3.16
443 444 2.416566 CGGACAGAGATCAGGTGACTTG 60.417 54.545 0.00 0.00 40.21 3.16
444 445 1.821753 CGGACAGAGATCAGGTGACTT 59.178 52.381 0.00 0.00 40.21 3.01
445 446 1.468985 CGGACAGAGATCAGGTGACT 58.531 55.000 0.00 0.00 46.44 3.41
446 447 0.179124 GCGGACAGAGATCAGGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
447 448 0.323816 AGCGGACAGAGATCAGGTGA 60.324 55.000 0.00 0.00 0.00 4.02
448 449 0.534412 AAGCGGACAGAGATCAGGTG 59.466 55.000 0.00 0.00 0.00 4.00
449 450 0.534412 CAAGCGGACAGAGATCAGGT 59.466 55.000 0.00 0.00 0.00 4.00
450 451 0.179089 CCAAGCGGACAGAGATCAGG 60.179 60.000 0.00 0.00 0.00 3.86
451 452 0.179089 CCCAAGCGGACAGAGATCAG 60.179 60.000 0.00 0.00 0.00 2.90
452 453 1.617018 CCCCAAGCGGACAGAGATCA 61.617 60.000 0.00 0.00 0.00 2.92
453 454 1.144936 CCCCAAGCGGACAGAGATC 59.855 63.158 0.00 0.00 0.00 2.75
454 455 0.909610 TTCCCCAAGCGGACAGAGAT 60.910 55.000 0.00 0.00 0.00 2.75
455 456 1.125093 TTTCCCCAAGCGGACAGAGA 61.125 55.000 0.00 0.00 0.00 3.10
456 457 0.250727 TTTTCCCCAAGCGGACAGAG 60.251 55.000 0.00 0.00 0.00 3.35
457 458 0.250727 CTTTTCCCCAAGCGGACAGA 60.251 55.000 0.00 0.00 0.00 3.41
458 459 0.250727 TCTTTTCCCCAAGCGGACAG 60.251 55.000 0.00 0.00 0.00 3.51
459 460 0.250727 CTCTTTTCCCCAAGCGGACA 60.251 55.000 0.00 0.00 0.00 4.02
460 461 0.036306 TCTCTTTTCCCCAAGCGGAC 59.964 55.000 0.00 0.00 0.00 4.79
461 462 0.324943 CTCTCTTTTCCCCAAGCGGA 59.675 55.000 0.00 0.00 0.00 5.54
462 463 0.324943 TCTCTCTTTTCCCCAAGCGG 59.675 55.000 0.00 0.00 0.00 5.52
463 464 1.002544 ACTCTCTCTTTTCCCCAAGCG 59.997 52.381 0.00 0.00 0.00 4.68
464 465 2.869101 ACTCTCTCTTTTCCCCAAGC 57.131 50.000 0.00 0.00 0.00 4.01
465 466 4.081365 GGACTACTCTCTCTTTTCCCCAAG 60.081 50.000 0.00 0.00 0.00 3.61
466 467 3.838903 GGACTACTCTCTCTTTTCCCCAA 59.161 47.826 0.00 0.00 0.00 4.12
467 468 3.077695 AGGACTACTCTCTCTTTTCCCCA 59.922 47.826 0.00 0.00 0.00 4.96
468 469 3.715287 AGGACTACTCTCTCTTTTCCCC 58.285 50.000 0.00 0.00 0.00 4.81
469 470 6.130569 TCATAGGACTACTCTCTCTTTTCCC 58.869 44.000 0.00 0.00 0.00 3.97
470 471 7.833285 ATCATAGGACTACTCTCTCTTTTCC 57.167 40.000 0.00 0.00 0.00 3.13
502 503 9.442047 GGCATGCATCTACTATATACTTTTTCT 57.558 33.333 21.36 0.00 0.00 2.52
503 504 9.442047 AGGCATGCATCTACTATATACTTTTTC 57.558 33.333 21.36 0.00 0.00 2.29
507 508 8.865090 GGATAGGCATGCATCTACTATATACTT 58.135 37.037 21.36 0.00 0.00 2.24
508 509 8.231007 AGGATAGGCATGCATCTACTATATACT 58.769 37.037 21.36 3.84 0.00 2.12
509 510 8.415950 AGGATAGGCATGCATCTACTATATAC 57.584 38.462 21.36 1.19 0.00 1.47
511 512 9.612879 ATTAGGATAGGCATGCATCTACTATAT 57.387 33.333 21.36 8.92 0.00 0.86
512 513 9.439461 AATTAGGATAGGCATGCATCTACTATA 57.561 33.333 21.36 7.09 0.00 1.31
513 514 7.927683 ATTAGGATAGGCATGCATCTACTAT 57.072 36.000 21.36 15.73 0.00 2.12
514 515 7.416777 CGAATTAGGATAGGCATGCATCTACTA 60.417 40.741 21.36 12.91 0.00 1.82
515 516 6.629068 CGAATTAGGATAGGCATGCATCTACT 60.629 42.308 21.36 14.05 0.00 2.57
516 517 5.521735 CGAATTAGGATAGGCATGCATCTAC 59.478 44.000 21.36 5.83 0.00 2.59
517 518 5.187772 ACGAATTAGGATAGGCATGCATCTA 59.812 40.000 21.36 12.93 0.00 1.98
518 519 4.019860 ACGAATTAGGATAGGCATGCATCT 60.020 41.667 21.36 10.94 0.00 2.90
519 520 4.256920 ACGAATTAGGATAGGCATGCATC 58.743 43.478 21.36 14.44 0.00 3.91
520 521 4.292186 ACGAATTAGGATAGGCATGCAT 57.708 40.909 21.36 16.31 0.00 3.96
521 522 3.769739 ACGAATTAGGATAGGCATGCA 57.230 42.857 21.36 0.00 0.00 3.96
522 523 5.438761 AAAACGAATTAGGATAGGCATGC 57.561 39.130 9.90 9.90 0.00 4.06
523 524 9.965824 AAATAAAAACGAATTAGGATAGGCATG 57.034 29.630 0.00 0.00 0.00 4.06
524 525 9.965824 CAAATAAAAACGAATTAGGATAGGCAT 57.034 29.630 0.00 0.00 0.00 4.40
525 526 7.918562 GCAAATAAAAACGAATTAGGATAGGCA 59.081 33.333 0.00 0.00 0.00 4.75
526 527 8.135529 AGCAAATAAAAACGAATTAGGATAGGC 58.864 33.333 0.00 0.00 0.00 3.93
531 532 9.352784 CATCAAGCAAATAAAAACGAATTAGGA 57.647 29.630 0.00 0.00 0.00 2.94
532 533 9.352784 TCATCAAGCAAATAAAAACGAATTAGG 57.647 29.630 0.00 0.00 0.00 2.69
534 535 8.845648 CGTCATCAAGCAAATAAAAACGAATTA 58.154 29.630 0.00 0.00 0.00 1.40
535 536 7.619161 GCGTCATCAAGCAAATAAAAACGAATT 60.619 33.333 0.00 0.00 0.00 2.17
536 537 6.183359 GCGTCATCAAGCAAATAAAAACGAAT 60.183 34.615 0.00 0.00 0.00 3.34
537 538 5.116377 GCGTCATCAAGCAAATAAAAACGAA 59.884 36.000 0.00 0.00 0.00 3.85
538 539 4.615121 GCGTCATCAAGCAAATAAAAACGA 59.385 37.500 0.00 0.00 0.00 3.85
539 540 4.201485 GGCGTCATCAAGCAAATAAAAACG 60.201 41.667 0.00 0.00 34.54 3.60
540 541 4.091365 GGGCGTCATCAAGCAAATAAAAAC 59.909 41.667 0.00 0.00 34.54 2.43
541 542 4.241681 GGGCGTCATCAAGCAAATAAAAA 58.758 39.130 0.00 0.00 34.54 1.94
542 543 3.256879 TGGGCGTCATCAAGCAAATAAAA 59.743 39.130 0.00 0.00 34.54 1.52
543 544 2.822561 TGGGCGTCATCAAGCAAATAAA 59.177 40.909 0.00 0.00 34.54 1.40
544 545 2.163412 GTGGGCGTCATCAAGCAAATAA 59.837 45.455 0.00 0.00 34.54 1.40
545 546 1.742831 GTGGGCGTCATCAAGCAAATA 59.257 47.619 0.00 0.00 34.54 1.40
546 547 0.527565 GTGGGCGTCATCAAGCAAAT 59.472 50.000 0.00 0.00 34.54 2.32
547 548 0.821301 TGTGGGCGTCATCAAGCAAA 60.821 50.000 0.00 0.00 34.54 3.68
548 549 1.228094 TGTGGGCGTCATCAAGCAA 60.228 52.632 0.00 0.00 34.54 3.91
549 550 1.965930 GTGTGGGCGTCATCAAGCA 60.966 57.895 0.00 0.00 34.54 3.91
550 551 2.690778 GGTGTGGGCGTCATCAAGC 61.691 63.158 0.00 0.00 0.00 4.01
551 552 2.390599 CGGTGTGGGCGTCATCAAG 61.391 63.158 0.00 0.00 0.00 3.02
552 553 2.358125 CGGTGTGGGCGTCATCAA 60.358 61.111 0.00 0.00 0.00 2.57
553 554 3.307108 TCGGTGTGGGCGTCATCA 61.307 61.111 0.00 0.00 0.00 3.07
554 555 2.813908 GTCGGTGTGGGCGTCATC 60.814 66.667 0.00 0.00 0.00 2.92
555 556 4.735132 CGTCGGTGTGGGCGTCAT 62.735 66.667 0.00 0.00 0.00 3.06
561 562 4.289245 AACGACCGTCGGTGTGGG 62.289 66.667 24.45 10.56 45.59 4.61
566 567 1.580845 CCTCTACAACGACCGTCGGT 61.581 60.000 24.03 18.94 42.68 4.69
567 568 1.136147 CCTCTACAACGACCGTCGG 59.864 63.158 24.03 10.48 45.59 4.79
568 569 0.518636 TTCCTCTACAACGACCGTCG 59.481 55.000 19.24 19.24 46.93 5.12
569 570 2.712057 TTTCCTCTACAACGACCGTC 57.288 50.000 0.00 0.00 0.00 4.79
570 571 3.126073 GTTTTTCCTCTACAACGACCGT 58.874 45.455 0.00 0.00 0.00 4.83
571 572 3.125316 TGTTTTTCCTCTACAACGACCG 58.875 45.455 0.00 0.00 0.00 4.79
572 573 5.488645 TTTGTTTTTCCTCTACAACGACC 57.511 39.130 0.00 0.00 32.00 4.79
573 574 6.721321 TCATTTGTTTTTCCTCTACAACGAC 58.279 36.000 0.00 0.00 32.00 4.34
574 575 6.928979 TCATTTGTTTTTCCTCTACAACGA 57.071 33.333 0.00 0.00 32.00 3.85
575 576 6.142320 GCTTCATTTGTTTTTCCTCTACAACG 59.858 38.462 0.00 0.00 32.00 4.10
576 577 7.168135 CAGCTTCATTTGTTTTTCCTCTACAAC 59.832 37.037 0.00 0.00 32.00 3.32
577 578 7.147915 ACAGCTTCATTTGTTTTTCCTCTACAA 60.148 33.333 0.00 0.00 0.00 2.41
578 579 6.321181 ACAGCTTCATTTGTTTTTCCTCTACA 59.679 34.615 0.00 0.00 0.00 2.74
579 580 6.739112 ACAGCTTCATTTGTTTTTCCTCTAC 58.261 36.000 0.00 0.00 0.00 2.59
580 581 6.772716 AGACAGCTTCATTTGTTTTTCCTCTA 59.227 34.615 0.00 0.00 0.00 2.43
581 582 5.595952 AGACAGCTTCATTTGTTTTTCCTCT 59.404 36.000 0.00 0.00 0.00 3.69
582 583 5.836347 AGACAGCTTCATTTGTTTTTCCTC 58.164 37.500 0.00 0.00 0.00 3.71
583 584 5.859205 AGACAGCTTCATTTGTTTTTCCT 57.141 34.783 0.00 0.00 0.00 3.36
584 585 7.042725 GGTTTAGACAGCTTCATTTGTTTTTCC 60.043 37.037 0.00 0.00 0.00 3.13
585 586 7.706607 AGGTTTAGACAGCTTCATTTGTTTTTC 59.293 33.333 0.00 0.00 0.00 2.29
586 587 7.555965 AGGTTTAGACAGCTTCATTTGTTTTT 58.444 30.769 0.00 0.00 0.00 1.94
587 588 7.112452 AGGTTTAGACAGCTTCATTTGTTTT 57.888 32.000 0.00 0.00 0.00 2.43
588 589 6.715347 AGGTTTAGACAGCTTCATTTGTTT 57.285 33.333 0.00 0.00 0.00 2.83
589 590 6.998673 AGTAGGTTTAGACAGCTTCATTTGTT 59.001 34.615 0.00 0.00 0.00 2.83
590 591 6.534634 AGTAGGTTTAGACAGCTTCATTTGT 58.465 36.000 0.00 0.00 0.00 2.83
591 592 7.440523 AAGTAGGTTTAGACAGCTTCATTTG 57.559 36.000 0.00 0.00 0.00 2.32
592 593 8.465273 AAAAGTAGGTTTAGACAGCTTCATTT 57.535 30.769 0.00 0.00 0.00 2.32
593 594 8.465273 AAAAAGTAGGTTTAGACAGCTTCATT 57.535 30.769 0.00 0.00 0.00 2.57
594 595 7.939588 AGAAAAAGTAGGTTTAGACAGCTTCAT 59.060 33.333 0.00 0.00 0.00 2.57
595 596 7.280356 AGAAAAAGTAGGTTTAGACAGCTTCA 58.720 34.615 0.00 0.00 0.00 3.02
596 597 7.731882 AGAAAAAGTAGGTTTAGACAGCTTC 57.268 36.000 0.00 0.00 0.00 3.86
597 598 7.556635 ACAAGAAAAAGTAGGTTTAGACAGCTT 59.443 33.333 0.00 0.00 0.00 3.74
598 599 7.012421 CACAAGAAAAAGTAGGTTTAGACAGCT 59.988 37.037 0.00 0.00 0.00 4.24
599 600 7.132863 CACAAGAAAAAGTAGGTTTAGACAGC 58.867 38.462 0.00 0.00 0.00 4.40
600 601 7.255139 CCCACAAGAAAAAGTAGGTTTAGACAG 60.255 40.741 0.00 0.00 0.00 3.51
601 602 6.544564 CCCACAAGAAAAAGTAGGTTTAGACA 59.455 38.462 0.00 0.00 0.00 3.41
602 603 6.016527 CCCCACAAGAAAAAGTAGGTTTAGAC 60.017 42.308 0.00 0.00 0.00 2.59
603 604 6.066032 CCCCACAAGAAAAAGTAGGTTTAGA 58.934 40.000 0.00 0.00 0.00 2.10
604 605 5.278808 GCCCCACAAGAAAAAGTAGGTTTAG 60.279 44.000 0.00 0.00 0.00 1.85
605 606 4.585581 GCCCCACAAGAAAAAGTAGGTTTA 59.414 41.667 0.00 0.00 0.00 2.01
606 607 3.386726 GCCCCACAAGAAAAAGTAGGTTT 59.613 43.478 0.00 0.00 0.00 3.27
607 608 2.963101 GCCCCACAAGAAAAAGTAGGTT 59.037 45.455 0.00 0.00 0.00 3.50
608 609 2.091555 TGCCCCACAAGAAAAAGTAGGT 60.092 45.455 0.00 0.00 0.00 3.08
609 610 2.558359 CTGCCCCACAAGAAAAAGTAGG 59.442 50.000 0.00 0.00 0.00 3.18
624 625 3.667217 ATCACCATGTGGCTGCCCC 62.667 63.158 17.53 4.89 39.32 5.80
649 650 2.457598 TCCTCTCAAGGCACGAACTAT 58.542 47.619 0.00 0.00 43.02 2.12
682 683 7.508965 GCAATGCAAGTTTCGAATCATAAAAA 58.491 30.769 0.00 0.00 0.00 1.94
733 734 2.540101 CTCGAGTCGACTTGCTTTTGTT 59.460 45.455 25.44 0.00 0.00 2.83
774 775 6.088173 GGTAAATTAGTTAAAACCGTGCTGG 58.912 40.000 0.00 0.00 46.41 4.85
819 820 3.471244 GAGCGACGTCCCCAGATCG 62.471 68.421 10.58 0.00 37.63 3.69
821 822 3.148279 GGAGCGACGTCCCCAGAT 61.148 66.667 10.58 0.00 0.00 2.90
822 823 3.957435 ATGGAGCGACGTCCCCAGA 62.957 63.158 19.35 3.07 35.49 3.86
823 824 2.521958 AAATGGAGCGACGTCCCCAG 62.522 60.000 19.35 4.79 35.49 4.45
824 825 2.515996 GAAATGGAGCGACGTCCCCA 62.516 60.000 17.65 17.65 35.49 4.96
825 826 1.814169 GAAATGGAGCGACGTCCCC 60.814 63.158 10.58 9.51 35.49 4.81
826 827 2.165301 CGAAATGGAGCGACGTCCC 61.165 63.158 10.58 6.16 35.49 4.46
827 828 1.411493 GACGAAATGGAGCGACGTCC 61.411 60.000 10.58 2.76 44.53 4.79
828 829 1.730593 CGACGAAATGGAGCGACGTC 61.731 60.000 5.18 5.18 46.01 4.34
829 830 1.800315 CGACGAAATGGAGCGACGT 60.800 57.895 0.00 0.00 39.85 4.34
830 831 2.987593 CGACGAAATGGAGCGACG 59.012 61.111 0.00 0.00 38.94 5.12
831 832 0.912528 GTACGACGAAATGGAGCGAC 59.087 55.000 0.00 0.00 0.00 5.19
832 833 0.179156 GGTACGACGAAATGGAGCGA 60.179 55.000 0.00 0.00 0.00 4.93
833 834 0.179145 AGGTACGACGAAATGGAGCG 60.179 55.000 0.00 0.00 0.00 5.03
834 835 1.135199 TCAGGTACGACGAAATGGAGC 60.135 52.381 0.00 0.00 0.00 4.70
835 836 2.933495 TCAGGTACGACGAAATGGAG 57.067 50.000 0.00 0.00 0.00 3.86
888 889 2.680352 GGCAGACGGTGAGGGAGA 60.680 66.667 0.00 0.00 0.00 3.71
916 917 3.701664 TCAGAGCAGAGGAGACATGTAA 58.298 45.455 0.00 0.00 0.00 2.41
920 932 2.902486 TGTTTCAGAGCAGAGGAGACAT 59.098 45.455 0.00 0.00 0.00 3.06
1073 1085 3.225940 AGGAAAAGAAGGCAGTGAAAGG 58.774 45.455 0.00 0.00 0.00 3.11
1074 1086 3.058639 CGAGGAAAAGAAGGCAGTGAAAG 60.059 47.826 0.00 0.00 0.00 2.62
1075 1087 2.878406 CGAGGAAAAGAAGGCAGTGAAA 59.122 45.455 0.00 0.00 0.00 2.69
1076 1088 2.494059 CGAGGAAAAGAAGGCAGTGAA 58.506 47.619 0.00 0.00 0.00 3.18
1077 1089 1.270839 CCGAGGAAAAGAAGGCAGTGA 60.271 52.381 0.00 0.00 0.00 3.41
1078 1090 1.160137 CCGAGGAAAAGAAGGCAGTG 58.840 55.000 0.00 0.00 0.00 3.66
1079 1091 0.036875 CCCGAGGAAAAGAAGGCAGT 59.963 55.000 0.00 0.00 0.00 4.40
1080 1092 0.324943 TCCCGAGGAAAAGAAGGCAG 59.675 55.000 0.00 0.00 0.00 4.85
1081 1093 0.768622 TTCCCGAGGAAAAGAAGGCA 59.231 50.000 3.21 0.00 38.93 4.75
1082 1094 2.130272 ATTCCCGAGGAAAAGAAGGC 57.870 50.000 9.07 0.00 45.41 4.35
1083 1095 3.127030 CGAAATTCCCGAGGAAAAGAAGG 59.873 47.826 9.07 0.00 45.41 3.46
1084 1096 3.426292 GCGAAATTCCCGAGGAAAAGAAG 60.426 47.826 9.07 3.13 45.41 2.85
1159 1171 2.651361 CTCCTCACGAACGGCAGT 59.349 61.111 0.00 0.00 0.00 4.40
1321 1333 4.120755 CCCTCCTGCCCTTCCTGC 62.121 72.222 0.00 0.00 0.00 4.85
1474 1486 6.203723 GCGCAAATCAGAAGATTAGTTAGGAT 59.796 38.462 0.30 0.00 43.52 3.24
1576 1588 7.130129 AGAGATATCCCTCCCTCAAGAATTTTT 59.870 37.037 0.00 0.00 33.76 1.94
1577 1589 6.623183 AGAGATATCCCTCCCTCAAGAATTTT 59.377 38.462 0.00 0.00 33.76 1.82
1748 1760 5.060506 AGTTTCGATGTGTTGTGGAATGTA 58.939 37.500 0.00 0.00 0.00 2.29
1753 1765 3.311322 GTCAAGTTTCGATGTGTTGTGGA 59.689 43.478 0.00 0.00 0.00 4.02
1763 1775 5.584649 TGTCTTTCTTGTGTCAAGTTTCGAT 59.415 36.000 8.93 0.00 0.00 3.59
1766 1778 6.305638 GTGTTGTCTTTCTTGTGTCAAGTTTC 59.694 38.462 8.93 0.28 0.00 2.78
1770 1782 4.155826 TGGTGTTGTCTTTCTTGTGTCAAG 59.844 41.667 3.44 3.44 0.00 3.02
1776 1788 9.313118 GAAAATAAATGGTGTTGTCTTTCTTGT 57.687 29.630 0.00 0.00 0.00 3.16
1809 1821 4.574674 ACTCCTGCATCCACTCAAAATA 57.425 40.909 0.00 0.00 0.00 1.40
2014 2026 1.357690 GTGACCGACGACACTGACA 59.642 57.895 14.51 0.00 34.65 3.58
2036 2048 1.521681 CGTGGGATCCTTCGGAAGC 60.522 63.158 12.58 0.00 34.34 3.86
2080 2092 0.518636 CGTGCCAGACAAAGTGATGG 59.481 55.000 0.00 0.00 33.18 3.51
2095 2107 0.109597 CAAAGCCATTCCAGACGTGC 60.110 55.000 0.00 0.00 0.00 5.34
2111 2123 2.965831 AGGCTCTAGTGTCAGTGTCAAA 59.034 45.455 0.00 0.00 0.00 2.69
2112 2124 2.297315 CAGGCTCTAGTGTCAGTGTCAA 59.703 50.000 0.00 0.00 0.00 3.18
2567 2684 3.935203 CACCGATGCCATACAATATCTCC 59.065 47.826 0.00 0.00 0.00 3.71
2568 2685 3.935203 CCACCGATGCCATACAATATCTC 59.065 47.826 0.00 0.00 0.00 2.75
2569 2686 3.869912 GCCACCGATGCCATACAATATCT 60.870 47.826 0.00 0.00 0.00 1.98
2570 2687 2.420022 GCCACCGATGCCATACAATATC 59.580 50.000 0.00 0.00 0.00 1.63
2571 2688 2.436417 GCCACCGATGCCATACAATAT 58.564 47.619 0.00 0.00 0.00 1.28
2572 2689 1.875996 CGCCACCGATGCCATACAATA 60.876 52.381 0.00 0.00 36.29 1.90
2573 2690 1.165907 CGCCACCGATGCCATACAAT 61.166 55.000 0.00 0.00 36.29 2.71
2574 2691 1.817520 CGCCACCGATGCCATACAA 60.818 57.895 0.00 0.00 36.29 2.41
2575 2692 2.203001 CGCCACCGATGCCATACA 60.203 61.111 0.00 0.00 36.29 2.29
2576 2693 1.498865 CTTCGCCACCGATGCCATAC 61.499 60.000 0.00 0.00 43.97 2.39
2577 2694 1.227527 CTTCGCCACCGATGCCATA 60.228 57.895 0.00 0.00 43.97 2.74
2578 2695 2.514592 CTTCGCCACCGATGCCAT 60.515 61.111 0.00 0.00 43.97 4.40
2579 2696 3.247056 TTCTTCGCCACCGATGCCA 62.247 57.895 0.00 0.00 43.97 4.92
2580 2697 2.435938 TTCTTCGCCACCGATGCC 60.436 61.111 0.00 0.00 43.97 4.40
2581 2698 1.696832 GACTTCTTCGCCACCGATGC 61.697 60.000 0.00 0.00 43.97 3.91
2582 2699 0.108615 AGACTTCTTCGCCACCGATG 60.109 55.000 0.00 0.00 43.97 3.84
2583 2700 0.173708 GAGACTTCTTCGCCACCGAT 59.826 55.000 0.00 0.00 43.97 4.18
2584 2701 1.585006 GAGACTTCTTCGCCACCGA 59.415 57.895 0.00 0.00 42.66 4.69
2585 2702 1.446272 GGAGACTTCTTCGCCACCG 60.446 63.158 0.00 0.00 43.59 4.94
2647 2768 5.500234 CAGGGATTTCTAATGTGTGGAGAA 58.500 41.667 0.00 0.00 0.00 2.87
2661 2782 4.855340 TGGAGTTTATGTCCAGGGATTTC 58.145 43.478 0.00 0.00 39.28 2.17
2675 2796 5.286267 AGAGAACCGAGTTTTGGAGTTTA 57.714 39.130 0.00 0.00 0.00 2.01
2729 2850 2.041485 TGGAATGCAGGAACTTGATGGA 59.959 45.455 0.00 0.00 34.60 3.41
2772 5632 1.032014 CAAAGGCCGGGGTAATCATG 58.968 55.000 2.18 0.00 0.00 3.07
2774 5634 1.379309 GCAAAGGCCGGGGTAATCA 60.379 57.895 2.18 0.00 0.00 2.57
2800 5661 2.095110 CCAGCTCGTTTGAAATGCATCA 60.095 45.455 0.00 0.00 0.00 3.07
2859 5723 5.409214 CCATTGAAAACAAAATAGCCCACTG 59.591 40.000 0.00 0.00 0.00 3.66
2868 5736 7.301868 TCTTAGCCTCCATTGAAAACAAAAT 57.698 32.000 0.00 0.00 0.00 1.82
2871 5739 6.323739 ACTTTCTTAGCCTCCATTGAAAACAA 59.676 34.615 0.00 0.00 0.00 2.83
2872 5740 5.833131 ACTTTCTTAGCCTCCATTGAAAACA 59.167 36.000 0.00 0.00 0.00 2.83
2873 5741 6.332735 ACTTTCTTAGCCTCCATTGAAAAC 57.667 37.500 0.00 0.00 0.00 2.43
3011 5881 7.730332 ACCTTTTAAAAGAGATGGGAGATGTTT 59.270 33.333 26.11 0.00 38.28 2.83
3013 5883 6.794534 ACCTTTTAAAAGAGATGGGAGATGT 58.205 36.000 26.11 10.06 38.28 3.06
3015 5885 6.599638 CGAACCTTTTAAAAGAGATGGGAGAT 59.400 38.462 26.11 4.63 38.28 2.75
3099 5969 2.101582 CTCGATCCTCCCTGAACGAATT 59.898 50.000 0.00 0.00 38.75 2.17
3156 6039 2.757868 TCACCAAACAAACTGTCCTTGG 59.242 45.455 8.16 8.16 41.61 3.61
3363 10272 5.291371 TGCGACATGGCAAAATTTATGATTG 59.709 36.000 0.00 0.00 40.59 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.