Multiple sequence alignment - TraesCS2D01G246600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G246600 chr2D 100.000 3003 0 0 916 3918 288228202 288225200 0.000000e+00 5546.0
1 TraesCS2D01G246600 chr2D 100.000 489 0 0 1 489 288229117 288228629 0.000000e+00 904.0
2 TraesCS2D01G246600 chr2D 97.368 38 1 0 78 115 288229007 288228970 9.090000e-07 65.8
3 TraesCS2D01G246600 chr2D 97.368 38 1 0 111 148 288229040 288229003 9.090000e-07 65.8
4 TraesCS2D01G246600 chr2A 97.549 2897 54 11 916 3800 323530798 323527907 0.000000e+00 4940.0
5 TraesCS2D01G246600 chr2A 96.040 101 3 1 3797 3897 323522950 323522851 3.130000e-36 163.0
6 TraesCS2D01G246600 chr2A 84.722 144 16 4 293 434 754602256 754602395 5.280000e-29 139.0
7 TraesCS2D01G246600 chr2B 96.126 2220 76 8 1557 3771 298326585 298324371 0.000000e+00 3615.0
8 TraesCS2D01G246600 chr2B 95.511 646 15 5 916 1555 298327309 298326672 0.000000e+00 1020.0
9 TraesCS2D01G246600 chr2B 91.111 180 15 1 111 290 46072143 46071965 3.910000e-60 243.0
10 TraesCS2D01G246600 chr2B 93.519 108 6 1 1 108 46072219 46072113 4.050000e-35 159.0
11 TraesCS2D01G246600 chr7A 91.257 183 15 1 111 293 497842415 497842234 8.410000e-62 248.0
12 TraesCS2D01G246600 chr7A 95.495 111 4 1 1 110 497842492 497842382 4.020000e-40 176.0
13 TraesCS2D01G246600 chr5B 95.652 115 5 0 1 115 556946834 556946948 6.690000e-43 185.0
14 TraesCS2D01G246600 chr4A 94.783 115 6 0 1 115 650055161 650055275 3.110000e-41 180.0
15 TraesCS2D01G246600 chr4A 88.235 136 10 5 293 425 39082237 39082369 1.460000e-34 158.0
16 TraesCS2D01G246600 chr3A 92.174 115 9 0 1 115 60807196 60807310 3.130000e-36 163.0
17 TraesCS2D01G246600 chr3A 87.591 137 15 2 300 434 208724253 208724117 1.460000e-34 158.0
18 TraesCS2D01G246600 chr1A 87.407 135 13 3 293 425 522186106 522186238 6.780000e-33 152.0
19 TraesCS2D01G246600 chr1A 84.783 138 19 2 299 434 565401039 565400902 1.900000e-28 137.0
20 TraesCS2D01G246600 chr7D 86.131 137 18 1 299 434 136907849 136907713 3.150000e-31 147.0
21 TraesCS2D01G246600 chr6A 86.131 137 17 2 300 434 615756872 615756736 3.150000e-31 147.0
22 TraesCS2D01G246600 chr3D 85.417 144 17 3 293 434 100180290 100180431 3.150000e-31 147.0
23 TraesCS2D01G246600 chr6D 89.565 115 8 2 1 115 331576079 331575969 4.080000e-30 143.0
24 TraesCS2D01G246600 chr5A 85.507 138 16 4 300 434 32701356 32701220 1.470000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G246600 chr2D 288225200 288229117 3917 True 1645.4 5546 98.6840 1 3918 4 chr2D.!!$R1 3917
1 TraesCS2D01G246600 chr2A 323527907 323530798 2891 True 4940.0 4940 97.5490 916 3800 1 chr2A.!!$R2 2884
2 TraesCS2D01G246600 chr2B 298324371 298327309 2938 True 2317.5 3615 95.8185 916 3771 2 chr2B.!!$R2 2855

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 315 0.108992 CGTACACACACGCATACCCT 60.109 55.0 0.00 0.00 34.78 4.34 F
389 390 0.179108 AGTCATTTAGGCGCCTCGTC 60.179 55.0 36.73 17.21 0.00 4.20 F
2077 2177 0.179124 TTTGTTTGGTTGACAGCGGC 60.179 50.0 0.00 0.00 0.00 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 2177 0.040336 CTGAAGTGCTGCAGTTGCTG 60.040 55.000 26.07 16.27 42.66 4.41 R
2464 2565 2.283298 CTATTGCATGTCGTTGGAGCT 58.717 47.619 0.00 0.00 0.00 4.09 R
3895 4001 0.104356 TAACCCCACTCCCACCTTCA 60.104 55.000 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.935240 TCTTCAAGGAGTTATTCTCAGGAA 57.065 37.500 0.00 0.00 44.40 3.36
24 25 6.702329 TCTTCAAGGAGTTATTCTCAGGAAC 58.298 40.000 0.00 0.00 44.40 3.62
25 26 6.270000 TCTTCAAGGAGTTATTCTCAGGAACA 59.730 38.462 0.00 0.00 44.40 3.18
26 27 6.627087 TCAAGGAGTTATTCTCAGGAACAT 57.373 37.500 0.00 0.00 44.40 2.71
27 28 6.409704 TCAAGGAGTTATTCTCAGGAACATG 58.590 40.000 0.00 0.00 44.40 3.21
28 29 4.775236 AGGAGTTATTCTCAGGAACATGC 58.225 43.478 0.00 0.00 44.40 4.06
29 30 4.225942 AGGAGTTATTCTCAGGAACATGCA 59.774 41.667 0.00 0.00 44.40 3.96
30 31 5.104193 AGGAGTTATTCTCAGGAACATGCAT 60.104 40.000 0.00 0.00 44.40 3.96
31 32 5.008415 GGAGTTATTCTCAGGAACATGCATG 59.992 44.000 25.09 25.09 44.40 4.06
32 33 5.748402 AGTTATTCTCAGGAACATGCATGA 58.252 37.500 32.75 9.56 33.96 3.07
33 34 6.182627 AGTTATTCTCAGGAACATGCATGAA 58.817 36.000 32.75 14.12 33.96 2.57
34 35 6.832384 AGTTATTCTCAGGAACATGCATGAAT 59.168 34.615 32.75 20.17 33.96 2.57
35 36 7.994911 AGTTATTCTCAGGAACATGCATGAATA 59.005 33.333 32.75 18.69 33.96 1.75
36 37 6.879276 ATTCTCAGGAACATGCATGAATAG 57.121 37.500 32.75 18.39 33.96 1.73
37 38 5.363562 TCTCAGGAACATGCATGAATAGT 57.636 39.130 32.75 7.36 0.00 2.12
38 39 5.748402 TCTCAGGAACATGCATGAATAGTT 58.252 37.500 32.75 16.06 0.00 2.24
39 40 6.182627 TCTCAGGAACATGCATGAATAGTTT 58.817 36.000 32.75 15.31 0.00 2.66
40 41 6.660521 TCTCAGGAACATGCATGAATAGTTTT 59.339 34.615 32.75 14.56 0.00 2.43
41 42 7.828717 TCTCAGGAACATGCATGAATAGTTTTA 59.171 33.333 32.75 8.32 0.00 1.52
42 43 8.523915 TCAGGAACATGCATGAATAGTTTTAT 57.476 30.769 32.75 3.33 0.00 1.40
43 44 9.625747 TCAGGAACATGCATGAATAGTTTTATA 57.374 29.630 32.75 4.27 0.00 0.98
72 73 9.844790 TTTGCTAGTTTTTGTAATCTGATCATG 57.155 29.630 0.00 0.00 0.00 3.07
73 74 8.791327 TGCTAGTTTTTGTAATCTGATCATGA 57.209 30.769 0.00 0.00 0.00 3.07
74 75 9.399797 TGCTAGTTTTTGTAATCTGATCATGAT 57.600 29.630 8.25 8.25 0.00 2.45
75 76 9.661187 GCTAGTTTTTGTAATCTGATCATGATG 57.339 33.333 14.30 0.00 0.00 3.07
76 77 9.661187 CTAGTTTTTGTAATCTGATCATGATGC 57.339 33.333 14.30 5.60 0.00 3.91
77 78 8.289939 AGTTTTTGTAATCTGATCATGATGCT 57.710 30.769 14.30 0.00 0.00 3.79
78 79 8.404000 AGTTTTTGTAATCTGATCATGATGCTC 58.596 33.333 14.30 0.00 0.00 4.26
79 80 7.868906 TTTTGTAATCTGATCATGATGCTCA 57.131 32.000 14.30 5.05 0.00 4.26
80 81 7.492352 TTTGTAATCTGATCATGATGCTCAG 57.508 36.000 17.67 17.67 40.80 3.35
81 82 5.548406 TGTAATCTGATCATGATGCTCAGG 58.452 41.667 21.85 7.61 40.10 3.86
82 83 3.704800 ATCTGATCATGATGCTCAGGG 57.295 47.619 21.85 3.38 40.10 4.45
83 84 1.071857 TCTGATCATGATGCTCAGGGC 59.928 52.381 21.85 0.00 40.10 5.19
94 95 1.831580 GCTCAGGGCATTGAACTTCT 58.168 50.000 0.00 0.00 41.35 2.85
95 96 1.471684 GCTCAGGGCATTGAACTTCTG 59.528 52.381 0.00 0.00 41.35 3.02
96 97 2.787994 CTCAGGGCATTGAACTTCTGT 58.212 47.619 0.00 0.00 0.00 3.41
97 98 3.152341 CTCAGGGCATTGAACTTCTGTT 58.848 45.455 0.00 0.00 39.42 3.16
98 99 6.391495 GCTCAGGGCATTGAACTTCTGTTC 62.391 50.000 2.35 2.35 44.99 3.18
110 111 5.405935 AACTTCTGTTCACTTTGCCTTTT 57.594 34.783 0.00 0.00 0.00 2.27
111 112 4.998788 ACTTCTGTTCACTTTGCCTTTTC 58.001 39.130 0.00 0.00 0.00 2.29
112 113 4.462483 ACTTCTGTTCACTTTGCCTTTTCA 59.538 37.500 0.00 0.00 0.00 2.69
113 114 4.637483 TCTGTTCACTTTGCCTTTTCAG 57.363 40.909 0.00 0.00 0.00 3.02
114 115 3.381272 TCTGTTCACTTTGCCTTTTCAGG 59.619 43.478 0.00 0.00 44.28 3.86
115 116 2.430332 TGTTCACTTTGCCTTTTCAGGG 59.570 45.455 0.00 0.00 41.21 4.45
126 127 3.917988 CCTTTTCAGGGCATTGAACTTC 58.082 45.455 3.52 0.00 36.84 3.01
127 128 3.575687 CCTTTTCAGGGCATTGAACTTCT 59.424 43.478 3.52 0.00 36.84 2.85
128 129 4.553323 CTTTTCAGGGCATTGAACTTCTG 58.447 43.478 3.52 0.00 36.84 3.02
129 130 2.957402 TCAGGGCATTGAACTTCTGT 57.043 45.000 0.00 0.00 0.00 3.41
130 131 3.228188 TCAGGGCATTGAACTTCTGTT 57.772 42.857 0.00 0.00 39.42 3.16
143 144 5.405935 AACTTCTGTTCACTTTGCCTTTT 57.594 34.783 0.00 0.00 0.00 2.27
144 145 5.405935 ACTTCTGTTCACTTTGCCTTTTT 57.594 34.783 0.00 0.00 0.00 1.94
145 146 6.524101 ACTTCTGTTCACTTTGCCTTTTTA 57.476 33.333 0.00 0.00 0.00 1.52
146 147 6.564328 ACTTCTGTTCACTTTGCCTTTTTAG 58.436 36.000 0.00 0.00 0.00 1.85
147 148 5.514274 TCTGTTCACTTTGCCTTTTTAGG 57.486 39.130 0.00 0.00 0.00 2.69
148 149 5.197451 TCTGTTCACTTTGCCTTTTTAGGA 58.803 37.500 0.00 0.00 0.00 2.94
149 150 5.833131 TCTGTTCACTTTGCCTTTTTAGGAT 59.167 36.000 0.00 0.00 0.00 3.24
150 151 6.016276 TCTGTTCACTTTGCCTTTTTAGGATC 60.016 38.462 0.00 0.00 0.00 3.36
151 152 5.010617 TGTTCACTTTGCCTTTTTAGGATCC 59.989 40.000 2.48 2.48 0.00 3.36
152 153 4.998051 TCACTTTGCCTTTTTAGGATCCT 58.002 39.130 20.48 20.48 0.00 3.24
153 154 5.393866 TCACTTTGCCTTTTTAGGATCCTT 58.606 37.500 22.03 4.11 0.00 3.36
154 155 5.476945 TCACTTTGCCTTTTTAGGATCCTTC 59.523 40.000 22.03 1.70 0.00 3.46
155 156 4.772624 ACTTTGCCTTTTTAGGATCCTTCC 59.227 41.667 22.03 1.60 42.96 3.46
165 166 2.940994 GGATCCTTCCTTTAGCTCCC 57.059 55.000 3.84 0.00 39.14 4.30
166 167 2.413601 GGATCCTTCCTTTAGCTCCCT 58.586 52.381 3.84 0.00 39.14 4.20
167 168 2.370519 GGATCCTTCCTTTAGCTCCCTC 59.629 54.545 3.84 0.00 39.14 4.30
168 169 2.950990 TCCTTCCTTTAGCTCCCTCT 57.049 50.000 0.00 0.00 0.00 3.69
169 170 2.472029 TCCTTCCTTTAGCTCCCTCTG 58.528 52.381 0.00 0.00 0.00 3.35
170 171 2.044492 TCCTTCCTTTAGCTCCCTCTGA 59.956 50.000 0.00 0.00 0.00 3.27
171 172 2.433970 CCTTCCTTTAGCTCCCTCTGAG 59.566 54.545 0.00 0.00 44.47 3.35
172 173 3.370104 CTTCCTTTAGCTCCCTCTGAGA 58.630 50.000 6.17 0.00 44.42 3.27
173 174 3.025322 TCCTTTAGCTCCCTCTGAGAG 57.975 52.381 6.17 1.57 44.42 3.20
174 175 2.313342 TCCTTTAGCTCCCTCTGAGAGT 59.687 50.000 8.88 0.00 44.42 3.24
175 176 3.103742 CCTTTAGCTCCCTCTGAGAGTT 58.896 50.000 8.88 0.00 44.42 3.01
176 177 3.517500 CCTTTAGCTCCCTCTGAGAGTTT 59.482 47.826 8.88 0.00 44.42 2.66
177 178 4.382577 CCTTTAGCTCCCTCTGAGAGTTTC 60.383 50.000 8.88 0.00 44.42 2.78
178 179 2.621556 AGCTCCCTCTGAGAGTTTCT 57.378 50.000 8.88 0.00 44.42 2.52
179 180 2.178580 AGCTCCCTCTGAGAGTTTCTG 58.821 52.381 8.88 0.00 44.42 3.02
180 181 1.405391 GCTCCCTCTGAGAGTTTCTGC 60.405 57.143 8.88 2.06 44.42 4.26
181 182 2.178580 CTCCCTCTGAGAGTTTCTGCT 58.821 52.381 8.88 0.00 44.42 4.24
182 183 3.360867 CTCCCTCTGAGAGTTTCTGCTA 58.639 50.000 8.88 0.00 44.42 3.49
183 184 3.960102 CTCCCTCTGAGAGTTTCTGCTAT 59.040 47.826 8.88 0.00 44.42 2.97
184 185 5.130705 TCCCTCTGAGAGTTTCTGCTATA 57.869 43.478 8.88 0.00 0.00 1.31
185 186 5.710646 TCCCTCTGAGAGTTTCTGCTATAT 58.289 41.667 8.88 0.00 0.00 0.86
186 187 5.772672 TCCCTCTGAGAGTTTCTGCTATATC 59.227 44.000 8.88 0.00 0.00 1.63
187 188 5.774690 CCCTCTGAGAGTTTCTGCTATATCT 59.225 44.000 8.88 0.00 0.00 1.98
188 189 6.071952 CCCTCTGAGAGTTTCTGCTATATCTC 60.072 46.154 8.88 0.00 34.99 2.75
189 190 6.716628 CCTCTGAGAGTTTCTGCTATATCTCT 59.283 42.308 8.88 0.00 35.36 3.10
190 191 7.231317 CCTCTGAGAGTTTCTGCTATATCTCTT 59.769 40.741 8.88 0.00 35.36 2.85
191 192 8.165239 TCTGAGAGTTTCTGCTATATCTCTTC 57.835 38.462 0.00 0.00 35.36 2.87
192 193 7.998383 TCTGAGAGTTTCTGCTATATCTCTTCT 59.002 37.037 0.00 0.00 35.36 2.85
193 194 8.532186 TGAGAGTTTCTGCTATATCTCTTCTT 57.468 34.615 0.00 0.00 35.36 2.52
194 195 8.629158 TGAGAGTTTCTGCTATATCTCTTCTTC 58.371 37.037 0.00 0.00 35.36 2.87
195 196 8.766994 AGAGTTTCTGCTATATCTCTTCTTCT 57.233 34.615 0.00 0.00 0.00 2.85
196 197 9.200817 AGAGTTTCTGCTATATCTCTTCTTCTT 57.799 33.333 0.00 0.00 0.00 2.52
197 198 9.463443 GAGTTTCTGCTATATCTCTTCTTCTTC 57.537 37.037 0.00 0.00 0.00 2.87
198 199 9.200817 AGTTTCTGCTATATCTCTTCTTCTTCT 57.799 33.333 0.00 0.00 0.00 2.85
199 200 9.816354 GTTTCTGCTATATCTCTTCTTCTTCTT 57.184 33.333 0.00 0.00 0.00 2.52
209 210 7.630242 TCTCTTCTTCTTCTTTTCTTTTGCA 57.370 32.000 0.00 0.00 0.00 4.08
210 211 7.701445 TCTCTTCTTCTTCTTTTCTTTTGCAG 58.299 34.615 0.00 0.00 0.00 4.41
211 212 7.554118 TCTCTTCTTCTTCTTTTCTTTTGCAGA 59.446 33.333 0.00 0.00 0.00 4.26
212 213 8.055279 TCTTCTTCTTCTTTTCTTTTGCAGAA 57.945 30.769 0.00 0.00 39.99 3.02
213 214 7.970614 TCTTCTTCTTCTTTTCTTTTGCAGAAC 59.029 33.333 0.00 0.00 41.56 3.01
214 215 7.396540 TCTTCTTCTTTTCTTTTGCAGAACT 57.603 32.000 0.00 0.00 41.56 3.01
215 216 7.475840 TCTTCTTCTTTTCTTTTGCAGAACTC 58.524 34.615 0.00 0.00 41.56 3.01
216 217 7.337942 TCTTCTTCTTTTCTTTTGCAGAACTCT 59.662 33.333 0.00 0.00 41.56 3.24
217 218 6.789262 TCTTCTTTTCTTTTGCAGAACTCTG 58.211 36.000 2.17 2.17 41.56 3.35
218 219 6.375455 TCTTCTTTTCTTTTGCAGAACTCTGT 59.625 34.615 8.46 0.00 45.45 3.41
219 220 7.552687 TCTTCTTTTCTTTTGCAGAACTCTGTA 59.447 33.333 8.46 0.92 45.45 2.74
220 221 7.807977 TCTTTTCTTTTGCAGAACTCTGTAT 57.192 32.000 8.46 0.00 45.45 2.29
221 222 7.865707 TCTTTTCTTTTGCAGAACTCTGTATC 58.134 34.615 8.46 0.00 45.45 2.24
222 223 7.716998 TCTTTTCTTTTGCAGAACTCTGTATCT 59.283 33.333 8.46 0.00 45.45 1.98
223 224 6.791887 TTCTTTTGCAGAACTCTGTATCTG 57.208 37.500 8.46 0.00 45.45 2.90
224 225 6.101650 TCTTTTGCAGAACTCTGTATCTGA 57.898 37.500 8.46 0.75 44.64 3.27
225 226 5.928839 TCTTTTGCAGAACTCTGTATCTGAC 59.071 40.000 8.46 0.00 44.64 3.51
226 227 5.474578 TTTGCAGAACTCTGTATCTGACT 57.525 39.130 8.46 0.00 44.64 3.41
227 228 4.710423 TGCAGAACTCTGTATCTGACTC 57.290 45.455 8.46 0.00 44.64 3.36
228 229 3.127721 TGCAGAACTCTGTATCTGACTCG 59.872 47.826 8.46 0.00 44.64 4.18
229 230 3.127895 GCAGAACTCTGTATCTGACTCGT 59.872 47.826 8.46 0.00 44.64 4.18
230 231 4.333095 GCAGAACTCTGTATCTGACTCGTA 59.667 45.833 8.46 0.00 44.64 3.43
231 232 5.728344 GCAGAACTCTGTATCTGACTCGTAC 60.728 48.000 8.46 0.00 44.64 3.67
232 233 5.583061 CAGAACTCTGTATCTGACTCGTACT 59.417 44.000 0.00 0.00 44.64 2.73
233 234 6.757478 CAGAACTCTGTATCTGACTCGTACTA 59.243 42.308 0.00 0.00 44.64 1.82
234 235 6.757947 AGAACTCTGTATCTGACTCGTACTAC 59.242 42.308 0.00 0.00 0.00 2.73
235 236 5.358922 ACTCTGTATCTGACTCGTACTACC 58.641 45.833 0.00 0.00 0.00 3.18
236 237 4.701765 TCTGTATCTGACTCGTACTACCC 58.298 47.826 0.00 0.00 0.00 3.69
237 238 4.408270 TCTGTATCTGACTCGTACTACCCT 59.592 45.833 0.00 0.00 0.00 4.34
238 239 5.104610 TCTGTATCTGACTCGTACTACCCTT 60.105 44.000 0.00 0.00 0.00 3.95
239 240 5.503927 TGTATCTGACTCGTACTACCCTTT 58.496 41.667 0.00 0.00 0.00 3.11
240 241 4.985538 ATCTGACTCGTACTACCCTTTG 57.014 45.455 0.00 0.00 0.00 2.77
241 242 4.025040 TCTGACTCGTACTACCCTTTGA 57.975 45.455 0.00 0.00 0.00 2.69
242 243 4.008330 TCTGACTCGTACTACCCTTTGAG 58.992 47.826 0.00 0.00 0.00 3.02
243 244 2.490903 TGACTCGTACTACCCTTTGAGC 59.509 50.000 0.00 0.00 0.00 4.26
244 245 2.754002 GACTCGTACTACCCTTTGAGCT 59.246 50.000 0.00 0.00 0.00 4.09
245 246 2.492484 ACTCGTACTACCCTTTGAGCTG 59.508 50.000 0.00 0.00 0.00 4.24
246 247 2.753452 CTCGTACTACCCTTTGAGCTGA 59.247 50.000 0.00 0.00 0.00 4.26
247 248 3.159472 TCGTACTACCCTTTGAGCTGAA 58.841 45.455 0.00 0.00 0.00 3.02
248 249 3.767673 TCGTACTACCCTTTGAGCTGAAT 59.232 43.478 0.00 0.00 0.00 2.57
249 250 4.951715 TCGTACTACCCTTTGAGCTGAATA 59.048 41.667 0.00 0.00 0.00 1.75
250 251 5.067413 TCGTACTACCCTTTGAGCTGAATAG 59.933 44.000 0.00 0.00 0.00 1.73
251 252 5.067413 CGTACTACCCTTTGAGCTGAATAGA 59.933 44.000 0.00 0.00 0.00 1.98
252 253 6.405508 CGTACTACCCTTTGAGCTGAATAGAA 60.406 42.308 0.00 0.00 0.00 2.10
253 254 6.567602 ACTACCCTTTGAGCTGAATAGAAT 57.432 37.500 0.00 0.00 0.00 2.40
254 255 7.676683 ACTACCCTTTGAGCTGAATAGAATA 57.323 36.000 0.00 0.00 0.00 1.75
255 256 8.268878 ACTACCCTTTGAGCTGAATAGAATAT 57.731 34.615 0.00 0.00 0.00 1.28
256 257 8.718656 ACTACCCTTTGAGCTGAATAGAATATT 58.281 33.333 0.00 0.00 0.00 1.28
257 258 9.566432 CTACCCTTTGAGCTGAATAGAATATTT 57.434 33.333 0.00 0.00 0.00 1.40
258 259 8.230472 ACCCTTTGAGCTGAATAGAATATTTG 57.770 34.615 0.00 0.00 0.00 2.32
259 260 8.055181 ACCCTTTGAGCTGAATAGAATATTTGA 58.945 33.333 0.00 0.00 0.00 2.69
260 261 8.348507 CCCTTTGAGCTGAATAGAATATTTGAC 58.651 37.037 0.00 0.00 0.00 3.18
261 262 8.896744 CCTTTGAGCTGAATAGAATATTTGACA 58.103 33.333 0.00 0.00 0.00 3.58
262 263 9.713740 CTTTGAGCTGAATAGAATATTTGACAC 57.286 33.333 0.00 0.00 0.00 3.67
263 264 7.792374 TGAGCTGAATAGAATATTTGACACC 57.208 36.000 0.00 0.00 0.00 4.16
264 265 7.568349 TGAGCTGAATAGAATATTTGACACCT 58.432 34.615 0.00 0.00 0.00 4.00
265 266 8.049117 TGAGCTGAATAGAATATTTGACACCTT 58.951 33.333 0.00 0.00 0.00 3.50
266 267 8.814038 AGCTGAATAGAATATTTGACACCTTT 57.186 30.769 0.00 0.00 0.00 3.11
267 268 8.680903 AGCTGAATAGAATATTTGACACCTTTG 58.319 33.333 0.00 0.00 0.00 2.77
268 269 8.677300 GCTGAATAGAATATTTGACACCTTTGA 58.323 33.333 0.00 0.00 0.00 2.69
271 272 9.455847 GAATAGAATATTTGACACCTTTGATGC 57.544 33.333 0.00 0.00 0.00 3.91
272 273 6.212888 AGAATATTTGACACCTTTGATGCC 57.787 37.500 0.00 0.00 0.00 4.40
273 274 5.954150 AGAATATTTGACACCTTTGATGCCT 59.046 36.000 0.00 0.00 0.00 4.75
274 275 6.438425 AGAATATTTGACACCTTTGATGCCTT 59.562 34.615 0.00 0.00 0.00 4.35
275 276 4.525912 ATTTGACACCTTTGATGCCTTC 57.474 40.909 0.00 0.00 0.00 3.46
276 277 1.522668 TGACACCTTTGATGCCTTCG 58.477 50.000 0.00 0.00 0.00 3.79
277 278 1.202758 TGACACCTTTGATGCCTTCGT 60.203 47.619 0.00 0.00 0.00 3.85
278 279 1.880027 GACACCTTTGATGCCTTCGTT 59.120 47.619 0.00 0.00 0.00 3.85
279 280 2.293399 GACACCTTTGATGCCTTCGTTT 59.707 45.455 0.00 0.00 0.00 3.60
280 281 2.034558 ACACCTTTGATGCCTTCGTTTG 59.965 45.455 0.00 0.00 0.00 2.93
281 282 2.034558 CACCTTTGATGCCTTCGTTTGT 59.965 45.455 0.00 0.00 0.00 2.83
282 283 2.693074 ACCTTTGATGCCTTCGTTTGTT 59.307 40.909 0.00 0.00 0.00 2.83
283 284 3.886505 ACCTTTGATGCCTTCGTTTGTTA 59.113 39.130 0.00 0.00 0.00 2.41
284 285 4.339814 ACCTTTGATGCCTTCGTTTGTTAA 59.660 37.500 0.00 0.00 0.00 2.01
285 286 5.163499 ACCTTTGATGCCTTCGTTTGTTAAA 60.163 36.000 0.00 0.00 0.00 1.52
286 287 5.751028 CCTTTGATGCCTTCGTTTGTTAAAA 59.249 36.000 0.00 0.00 0.00 1.52
287 288 6.256757 CCTTTGATGCCTTCGTTTGTTAAAAA 59.743 34.615 0.00 0.00 0.00 1.94
307 308 2.724744 AAAAGAACGTACACACACGC 57.275 45.000 0.00 0.00 45.77 5.34
308 309 1.642728 AAAGAACGTACACACACGCA 58.357 45.000 0.00 0.00 45.77 5.24
309 310 1.860676 AAGAACGTACACACACGCAT 58.139 45.000 0.00 0.00 45.77 4.73
310 311 2.710220 AGAACGTACACACACGCATA 57.290 45.000 0.00 0.00 45.77 3.14
311 312 2.322161 AGAACGTACACACACGCATAC 58.678 47.619 0.00 0.00 45.77 2.39
312 313 1.387756 GAACGTACACACACGCATACC 59.612 52.381 0.00 0.00 45.77 2.73
313 314 0.388907 ACGTACACACACGCATACCC 60.389 55.000 0.00 0.00 45.77 3.69
314 315 0.108992 CGTACACACACGCATACCCT 60.109 55.000 0.00 0.00 34.78 4.34
315 316 1.132834 CGTACACACACGCATACCCTA 59.867 52.381 0.00 0.00 34.78 3.53
316 317 2.223641 CGTACACACACGCATACCCTAT 60.224 50.000 0.00 0.00 34.78 2.57
317 318 2.596904 ACACACACGCATACCCTATC 57.403 50.000 0.00 0.00 0.00 2.08
318 319 1.138266 ACACACACGCATACCCTATCC 59.862 52.381 0.00 0.00 0.00 2.59
319 320 1.412710 CACACACGCATACCCTATCCT 59.587 52.381 0.00 0.00 0.00 3.24
320 321 2.116238 ACACACGCATACCCTATCCTT 58.884 47.619 0.00 0.00 0.00 3.36
321 322 3.069016 CACACACGCATACCCTATCCTTA 59.931 47.826 0.00 0.00 0.00 2.69
322 323 3.901844 ACACACGCATACCCTATCCTTAT 59.098 43.478 0.00 0.00 0.00 1.73
323 324 4.245660 CACACGCATACCCTATCCTTATG 58.754 47.826 0.00 0.00 0.00 1.90
324 325 4.021456 CACACGCATACCCTATCCTTATGA 60.021 45.833 0.00 0.00 0.00 2.15
325 326 4.220821 ACACGCATACCCTATCCTTATGAG 59.779 45.833 0.00 0.00 0.00 2.90
326 327 3.195825 ACGCATACCCTATCCTTATGAGC 59.804 47.826 0.00 0.00 0.00 4.26
327 328 3.449018 CGCATACCCTATCCTTATGAGCT 59.551 47.826 0.00 0.00 0.00 4.09
328 329 4.440802 CGCATACCCTATCCTTATGAGCTC 60.441 50.000 6.82 6.82 0.00 4.09
329 330 4.141824 GCATACCCTATCCTTATGAGCTCC 60.142 50.000 12.15 0.00 0.00 4.70
330 331 3.933239 ACCCTATCCTTATGAGCTCCT 57.067 47.619 12.15 3.56 0.00 3.69
331 332 4.220861 ACCCTATCCTTATGAGCTCCTT 57.779 45.455 12.15 0.92 0.00 3.36
332 333 4.164204 ACCCTATCCTTATGAGCTCCTTC 58.836 47.826 12.15 0.00 0.00 3.46
333 334 4.163427 CCCTATCCTTATGAGCTCCTTCA 58.837 47.826 12.15 0.00 0.00 3.02
334 335 4.594920 CCCTATCCTTATGAGCTCCTTCAA 59.405 45.833 12.15 0.00 0.00 2.69
335 336 5.279910 CCCTATCCTTATGAGCTCCTTCAAG 60.280 48.000 12.15 8.73 0.00 3.02
336 337 5.541868 CCTATCCTTATGAGCTCCTTCAAGA 59.458 44.000 12.15 1.51 0.00 3.02
337 338 5.549742 ATCCTTATGAGCTCCTTCAAGAG 57.450 43.478 12.15 0.00 36.92 2.85
338 339 4.614475 TCCTTATGAGCTCCTTCAAGAGA 58.386 43.478 12.15 6.15 35.82 3.10
339 340 4.404073 TCCTTATGAGCTCCTTCAAGAGAC 59.596 45.833 12.15 0.00 35.82 3.36
340 341 4.405358 CCTTATGAGCTCCTTCAAGAGACT 59.595 45.833 12.15 0.00 35.82 3.24
341 342 3.891422 ATGAGCTCCTTCAAGAGACTG 57.109 47.619 12.15 0.00 35.82 3.51
342 343 1.898472 TGAGCTCCTTCAAGAGACTGG 59.102 52.381 12.15 0.00 35.82 4.00
343 344 1.206849 GAGCTCCTTCAAGAGACTGGG 59.793 57.143 0.87 0.00 35.82 4.45
344 345 0.392327 GCTCCTTCAAGAGACTGGGC 60.392 60.000 0.00 0.00 35.82 5.36
345 346 0.251634 CTCCTTCAAGAGACTGGGCC 59.748 60.000 0.00 0.00 35.82 5.80
346 347 1.078848 CCTTCAAGAGACTGGGCCG 60.079 63.158 0.00 0.00 0.00 6.13
347 348 1.544825 CCTTCAAGAGACTGGGCCGA 61.545 60.000 0.00 0.00 0.00 5.54
348 349 0.390472 CTTCAAGAGACTGGGCCGAC 60.390 60.000 0.00 0.00 0.00 4.79
349 350 1.118965 TTCAAGAGACTGGGCCGACA 61.119 55.000 0.00 0.00 0.00 4.35
350 351 0.904865 TCAAGAGACTGGGCCGACAT 60.905 55.000 0.00 0.00 0.00 3.06
351 352 0.824109 CAAGAGACTGGGCCGACATA 59.176 55.000 0.00 0.00 0.00 2.29
352 353 1.414181 CAAGAGACTGGGCCGACATAT 59.586 52.381 0.00 0.00 0.00 1.78
353 354 1.333177 AGAGACTGGGCCGACATATC 58.667 55.000 0.00 0.00 0.00 1.63
354 355 1.040646 GAGACTGGGCCGACATATCA 58.959 55.000 0.00 0.00 0.00 2.15
355 356 1.620819 GAGACTGGGCCGACATATCAT 59.379 52.381 0.00 0.00 0.00 2.45
356 357 2.037772 GAGACTGGGCCGACATATCATT 59.962 50.000 0.00 0.00 0.00 2.57
357 358 2.439507 AGACTGGGCCGACATATCATTT 59.560 45.455 0.00 0.00 0.00 2.32
358 359 3.117888 AGACTGGGCCGACATATCATTTT 60.118 43.478 0.00 0.00 0.00 1.82
359 360 2.951642 ACTGGGCCGACATATCATTTTG 59.048 45.455 0.00 0.00 0.00 2.44
360 361 3.213506 CTGGGCCGACATATCATTTTGA 58.786 45.455 0.00 0.00 0.00 2.69
361 362 3.213506 TGGGCCGACATATCATTTTGAG 58.786 45.455 0.00 0.00 0.00 3.02
362 363 3.118075 TGGGCCGACATATCATTTTGAGA 60.118 43.478 0.00 0.00 0.00 3.27
363 364 4.074970 GGGCCGACATATCATTTTGAGAT 58.925 43.478 0.00 0.00 0.00 2.75
364 365 4.520492 GGGCCGACATATCATTTTGAGATT 59.480 41.667 0.00 0.00 0.00 2.40
365 366 5.010012 GGGCCGACATATCATTTTGAGATTT 59.990 40.000 0.00 0.00 0.00 2.17
366 367 6.206634 GGGCCGACATATCATTTTGAGATTTA 59.793 38.462 0.00 0.00 0.00 1.40
367 368 7.078228 GGCCGACATATCATTTTGAGATTTAC 58.922 38.462 0.00 0.00 0.00 2.01
368 369 6.792250 GCCGACATATCATTTTGAGATTTACG 59.208 38.462 0.00 0.00 0.00 3.18
369 370 7.307160 GCCGACATATCATTTTGAGATTTACGA 60.307 37.037 0.00 0.00 0.00 3.43
370 371 8.547894 CCGACATATCATTTTGAGATTTACGAA 58.452 33.333 0.00 0.00 0.00 3.85
371 372 9.573102 CGACATATCATTTTGAGATTTACGAAG 57.427 33.333 0.00 0.00 0.00 3.79
381 382 6.903883 TGAGATTTACGAAGTCATTTAGGC 57.096 37.500 0.00 0.00 43.93 3.93
382 383 5.518847 TGAGATTTACGAAGTCATTTAGGCG 59.481 40.000 0.00 0.00 43.93 5.52
383 384 4.270325 AGATTTACGAAGTCATTTAGGCGC 59.730 41.667 0.00 0.00 43.93 6.53
384 385 1.930567 TACGAAGTCATTTAGGCGCC 58.069 50.000 21.89 21.89 43.93 6.53
385 386 0.249398 ACGAAGTCATTTAGGCGCCT 59.751 50.000 34.85 34.85 29.74 5.52
386 387 0.931005 CGAAGTCATTTAGGCGCCTC 59.069 55.000 36.73 18.25 0.00 4.70
387 388 0.931005 GAAGTCATTTAGGCGCCTCG 59.069 55.000 36.73 20.14 0.00 4.63
388 389 0.249398 AAGTCATTTAGGCGCCTCGT 59.751 50.000 36.73 17.76 0.00 4.18
389 390 0.179108 AGTCATTTAGGCGCCTCGTC 60.179 55.000 36.73 17.21 0.00 4.20
390 391 1.226859 TCATTTAGGCGCCTCGTCG 60.227 57.895 36.73 20.53 36.23 5.12
391 392 1.518572 CATTTAGGCGCCTCGTCGT 60.519 57.895 36.73 11.27 36.23 4.34
392 393 1.226888 ATTTAGGCGCCTCGTCGTC 60.227 57.895 36.73 0.00 36.23 4.20
393 394 2.931713 ATTTAGGCGCCTCGTCGTCG 62.932 60.000 36.73 0.00 39.34 5.12
413 414 3.069778 GGAACGCCTTCTCCCACT 58.930 61.111 0.00 0.00 0.00 4.00
414 415 2.283824 GGAACGCCTTCTCCCACTA 58.716 57.895 0.00 0.00 0.00 2.74
415 416 0.611714 GGAACGCCTTCTCCCACTAA 59.388 55.000 0.00 0.00 0.00 2.24
416 417 1.002773 GGAACGCCTTCTCCCACTAAA 59.997 52.381 0.00 0.00 0.00 1.85
417 418 2.551504 GGAACGCCTTCTCCCACTAAAA 60.552 50.000 0.00 0.00 0.00 1.52
418 419 2.474410 ACGCCTTCTCCCACTAAAAG 57.526 50.000 0.00 0.00 0.00 2.27
419 420 1.087501 CGCCTTCTCCCACTAAAAGC 58.912 55.000 0.00 0.00 0.00 3.51
420 421 1.087501 GCCTTCTCCCACTAAAAGCG 58.912 55.000 0.00 0.00 0.00 4.68
421 422 1.087501 CCTTCTCCCACTAAAAGCGC 58.912 55.000 0.00 0.00 0.00 5.92
422 423 1.610624 CCTTCTCCCACTAAAAGCGCA 60.611 52.381 11.47 0.00 0.00 6.09
423 424 2.359900 CTTCTCCCACTAAAAGCGCAT 58.640 47.619 11.47 0.00 0.00 4.73
424 425 2.024176 TCTCCCACTAAAAGCGCATC 57.976 50.000 11.47 0.00 0.00 3.91
425 426 1.277842 TCTCCCACTAAAAGCGCATCA 59.722 47.619 11.47 0.00 0.00 3.07
426 427 2.092968 TCTCCCACTAAAAGCGCATCAT 60.093 45.455 11.47 0.00 0.00 2.45
427 428 2.288666 TCCCACTAAAAGCGCATCATC 58.711 47.619 11.47 0.00 0.00 2.92
428 429 1.003545 CCCACTAAAAGCGCATCATCG 60.004 52.381 11.47 0.00 0.00 3.84
429 430 1.933181 CCACTAAAAGCGCATCATCGA 59.067 47.619 11.47 0.00 0.00 3.59
430 431 2.351418 CCACTAAAAGCGCATCATCGAA 59.649 45.455 11.47 0.00 0.00 3.71
431 432 3.181511 CCACTAAAAGCGCATCATCGAAA 60.182 43.478 11.47 0.00 0.00 3.46
432 433 4.402583 CACTAAAAGCGCATCATCGAAAA 58.597 39.130 11.47 0.00 0.00 2.29
433 434 5.030295 CACTAAAAGCGCATCATCGAAAAT 58.970 37.500 11.47 0.00 0.00 1.82
434 435 6.191661 CACTAAAAGCGCATCATCGAAAATA 58.808 36.000 11.47 0.00 0.00 1.40
435 436 6.686679 CACTAAAAGCGCATCATCGAAAATAA 59.313 34.615 11.47 0.00 0.00 1.40
436 437 7.218014 CACTAAAAGCGCATCATCGAAAATAAA 59.782 33.333 11.47 0.00 0.00 1.40
437 438 7.915397 ACTAAAAGCGCATCATCGAAAATAAAT 59.085 29.630 11.47 0.00 0.00 1.40
438 439 6.738352 AAAGCGCATCATCGAAAATAAATC 57.262 33.333 11.47 0.00 0.00 2.17
439 440 4.787598 AGCGCATCATCGAAAATAAATCC 58.212 39.130 11.47 0.00 0.00 3.01
440 441 4.275689 AGCGCATCATCGAAAATAAATCCA 59.724 37.500 11.47 0.00 0.00 3.41
441 442 4.975502 GCGCATCATCGAAAATAAATCCAA 59.024 37.500 0.30 0.00 0.00 3.53
442 443 5.116074 GCGCATCATCGAAAATAAATCCAAG 59.884 40.000 0.30 0.00 0.00 3.61
443 444 6.429624 CGCATCATCGAAAATAAATCCAAGA 58.570 36.000 0.00 0.00 0.00 3.02
444 445 6.912051 CGCATCATCGAAAATAAATCCAAGAA 59.088 34.615 0.00 0.00 0.00 2.52
445 446 7.592533 CGCATCATCGAAAATAAATCCAAGAAT 59.407 33.333 0.00 0.00 0.00 2.40
446 447 9.897744 GCATCATCGAAAATAAATCCAAGAATA 57.102 29.630 0.00 0.00 0.00 1.75
451 452 8.781067 TCGAAAATAAATCCAAGAATAATGCG 57.219 30.769 0.00 0.00 0.00 4.73
452 453 8.616942 TCGAAAATAAATCCAAGAATAATGCGA 58.383 29.630 0.00 0.00 0.00 5.10
453 454 8.895845 CGAAAATAAATCCAAGAATAATGCGAG 58.104 33.333 0.00 0.00 0.00 5.03
454 455 9.736023 GAAAATAAATCCAAGAATAATGCGAGT 57.264 29.630 0.00 0.00 0.00 4.18
455 456 9.520204 AAAATAAATCCAAGAATAATGCGAGTG 57.480 29.630 0.00 0.00 0.00 3.51
456 457 4.558538 AATCCAAGAATAATGCGAGTGC 57.441 40.909 0.00 0.00 43.20 4.40
468 469 4.284123 GAGTGCATGCTCGTTGGA 57.716 55.556 20.33 0.00 0.00 3.53
469 470 2.084844 GAGTGCATGCTCGTTGGAG 58.915 57.895 20.33 0.00 43.46 3.86
470 471 0.390340 GAGTGCATGCTCGTTGGAGA 60.390 55.000 20.33 0.00 43.27 3.71
471 472 0.251354 AGTGCATGCTCGTTGGAGAT 59.749 50.000 20.33 0.00 43.27 2.75
472 473 0.376152 GTGCATGCTCGTTGGAGATG 59.624 55.000 20.33 0.00 43.27 2.90
473 474 1.354506 GCATGCTCGTTGGAGATGC 59.645 57.895 11.37 10.47 43.27 3.91
474 475 2.020131 CATGCTCGTTGGAGATGCC 58.980 57.895 0.00 0.00 43.27 4.40
475 476 1.153086 ATGCTCGTTGGAGATGCCC 60.153 57.895 0.00 0.00 43.27 5.36
476 477 1.630126 ATGCTCGTTGGAGATGCCCT 61.630 55.000 0.00 0.00 43.27 5.19
477 478 1.817099 GCTCGTTGGAGATGCCCTG 60.817 63.158 0.00 0.00 43.27 4.45
478 479 1.153289 CTCGTTGGAGATGCCCTGG 60.153 63.158 0.00 0.00 43.27 4.45
479 480 2.124570 CGTTGGAGATGCCCTGGG 60.125 66.667 8.86 8.86 34.97 4.45
480 481 2.971598 CGTTGGAGATGCCCTGGGT 61.972 63.158 15.56 0.00 34.97 4.51
481 482 1.379044 GTTGGAGATGCCCTGGGTG 60.379 63.158 15.56 0.00 34.97 4.61
482 483 3.286694 TTGGAGATGCCCTGGGTGC 62.287 63.158 15.56 0.69 34.97 5.01
483 484 3.731728 GGAGATGCCCTGGGTGCA 61.732 66.667 15.56 7.39 43.97 4.57
484 485 2.356278 GAGATGCCCTGGGTGCAA 59.644 61.111 15.56 0.00 42.92 4.08
485 486 1.304381 GAGATGCCCTGGGTGCAAA 60.304 57.895 15.56 0.00 42.92 3.68
486 487 0.685458 GAGATGCCCTGGGTGCAAAT 60.685 55.000 15.56 0.75 42.92 2.32
487 488 0.630673 AGATGCCCTGGGTGCAAATA 59.369 50.000 15.56 0.00 42.92 1.40
488 489 1.006998 AGATGCCCTGGGTGCAAATAA 59.993 47.619 15.56 0.00 42.92 1.40
960 961 1.462238 CCCCTCCGATCCAATCCCT 60.462 63.158 0.00 0.00 0.00 4.20
961 962 1.757306 CCCTCCGATCCAATCCCTG 59.243 63.158 0.00 0.00 0.00 4.45
1113 1122 2.668632 CAGGCGGTAGGGCAAGAA 59.331 61.111 0.00 0.00 45.36 2.52
1280 1289 1.880340 CTTCTCTGGCGGTCGCATC 60.880 63.158 17.21 1.33 44.11 3.91
1306 1319 5.127491 AGAACTTGTTCCGTCCATTGTTAA 58.873 37.500 9.58 0.00 0.00 2.01
1307 1320 5.238650 AGAACTTGTTCCGTCCATTGTTAAG 59.761 40.000 9.58 0.00 0.00 1.85
1308 1321 3.252458 ACTTGTTCCGTCCATTGTTAAGC 59.748 43.478 0.00 0.00 0.00 3.09
1309 1322 2.852449 TGTTCCGTCCATTGTTAAGCA 58.148 42.857 0.00 0.00 0.00 3.91
1455 1468 3.606687 AACAGTATAGCTGGTTTTCGGG 58.393 45.455 0.00 0.00 43.98 5.14
1458 1471 2.570302 AGTATAGCTGGTTTTCGGGTGT 59.430 45.455 0.00 0.00 33.93 4.16
1469 1482 5.068723 TGGTTTTCGGGTGTTGCTAATTTTA 59.931 36.000 0.00 0.00 0.00 1.52
1714 1814 2.029649 TCGAGGGGTTTCTTGTTAGTCG 60.030 50.000 0.00 0.00 0.00 4.18
1751 1851 4.832266 TCCAGTTTATTGTCAGGCATGTTT 59.168 37.500 0.00 0.00 0.00 2.83
1803 1903 7.094634 ACTCCTTTGCATTGTACATTGACTTAG 60.095 37.037 19.36 10.92 0.00 2.18
1895 1995 9.585099 TGGCAAATCTGATTTATTCATTGTTAC 57.415 29.630 14.78 0.00 32.72 2.50
1897 1997 9.289303 GCAAATCTGATTTATTCATTGTTACGT 57.711 29.630 14.78 0.00 32.72 3.57
2077 2177 0.179124 TTTGTTTGGTTGACAGCGGC 60.179 50.000 0.00 0.00 0.00 6.53
2102 2202 1.270732 ACTGCAGCACTTCAGGAAGAG 60.271 52.381 15.27 8.87 40.79 2.85
2527 2628 4.799715 TCAAGAACCCCCTGAAAAGTTA 57.200 40.909 0.00 0.00 0.00 2.24
2536 2637 5.076873 CCCCCTGAAAAGTTAGACATTTCA 58.923 41.667 10.02 10.02 41.61 2.69
2854 2955 2.705658 TGAAGGAGGCAAGAAGACTGAA 59.294 45.455 0.00 0.00 33.72 3.02
2855 2956 3.136443 TGAAGGAGGCAAGAAGACTGAAA 59.864 43.478 0.00 0.00 33.72 2.69
2994 3095 5.589192 AGAGTTCCGTTATTGTAATCCTCG 58.411 41.667 0.00 0.00 0.00 4.63
3230 3332 2.093288 TGGTGGATGAATCTGCAGAGAC 60.093 50.000 22.96 17.64 0.00 3.36
3632 3736 7.810658 TGATAGCACTCTTTTTCTTGATTGAC 58.189 34.615 0.00 0.00 0.00 3.18
3668 3772 7.997773 ATGGAATCATCAGGATCTATTTGTG 57.002 36.000 0.00 0.00 34.28 3.33
3679 3785 1.624312 TCTATTTGTGTGCCCGGTACA 59.376 47.619 3.91 3.91 0.00 2.90
3690 3796 1.612199 GCCCGGTACAAGTTGATTCCA 60.612 52.381 10.54 0.00 0.00 3.53
3691 3797 2.356135 CCCGGTACAAGTTGATTCCAG 58.644 52.381 10.54 1.53 0.00 3.86
3763 3869 5.291178 TGTGGTTGCATTGAAAGATTTCAG 58.709 37.500 7.95 0.17 46.68 3.02
3800 3906 7.253905 ACCTTAGGCTCAATCTGTTAAGTAA 57.746 36.000 0.00 0.00 0.00 2.24
3801 3907 7.686434 ACCTTAGGCTCAATCTGTTAAGTAAA 58.314 34.615 0.00 0.00 0.00 2.01
3802 3908 8.161425 ACCTTAGGCTCAATCTGTTAAGTAAAA 58.839 33.333 0.00 0.00 0.00 1.52
3803 3909 9.010029 CCTTAGGCTCAATCTGTTAAGTAAAAA 57.990 33.333 0.00 0.00 0.00 1.94
3804 3910 9.827411 CTTAGGCTCAATCTGTTAAGTAAAAAC 57.173 33.333 0.00 0.00 0.00 2.43
3805 3911 7.817418 AGGCTCAATCTGTTAAGTAAAAACA 57.183 32.000 0.00 0.00 35.61 2.83
3806 3912 8.232913 AGGCTCAATCTGTTAAGTAAAAACAA 57.767 30.769 0.00 0.00 36.46 2.83
3807 3913 8.352942 AGGCTCAATCTGTTAAGTAAAAACAAG 58.647 33.333 0.00 0.00 36.46 3.16
3808 3914 8.349983 GGCTCAATCTGTTAAGTAAAAACAAGA 58.650 33.333 0.00 0.00 36.46 3.02
3809 3915 9.387123 GCTCAATCTGTTAAGTAAAAACAAGAG 57.613 33.333 0.00 0.00 36.46 2.85
3812 3918 9.387123 CAATCTGTTAAGTAAAAACAAGAGAGC 57.613 33.333 0.00 0.00 36.46 4.09
3813 3919 8.910351 ATCTGTTAAGTAAAAACAAGAGAGCT 57.090 30.769 0.00 0.00 36.46 4.09
3814 3920 8.142994 TCTGTTAAGTAAAAACAAGAGAGCTG 57.857 34.615 0.00 0.00 36.46 4.24
3815 3921 6.725246 TGTTAAGTAAAAACAAGAGAGCTGC 58.275 36.000 0.00 0.00 34.04 5.25
3816 3922 4.837896 AAGTAAAAACAAGAGAGCTGCC 57.162 40.909 0.00 0.00 0.00 4.85
3817 3923 4.092116 AGTAAAAACAAGAGAGCTGCCT 57.908 40.909 0.00 0.00 0.00 4.75
3818 3924 4.464947 AGTAAAAACAAGAGAGCTGCCTT 58.535 39.130 0.00 0.00 0.00 4.35
3819 3925 3.722728 AAAAACAAGAGAGCTGCCTTG 57.277 42.857 18.16 18.16 43.84 3.61
3827 3933 5.873732 CAAGAGAGCTGCCTTGTTAATTAC 58.126 41.667 13.70 0.00 36.08 1.89
3828 3934 4.518249 AGAGAGCTGCCTTGTTAATTACC 58.482 43.478 0.00 0.00 0.00 2.85
3829 3935 4.019321 AGAGAGCTGCCTTGTTAATTACCA 60.019 41.667 0.00 0.00 0.00 3.25
3830 3936 4.662278 AGAGCTGCCTTGTTAATTACCAA 58.338 39.130 0.00 0.00 0.00 3.67
3831 3937 5.076873 AGAGCTGCCTTGTTAATTACCAAA 58.923 37.500 0.00 0.00 0.00 3.28
3832 3938 5.538433 AGAGCTGCCTTGTTAATTACCAAAA 59.462 36.000 0.00 0.00 0.00 2.44
3833 3939 6.041523 AGAGCTGCCTTGTTAATTACCAAAAA 59.958 34.615 0.00 0.00 0.00 1.94
3834 3940 5.989168 AGCTGCCTTGTTAATTACCAAAAAC 59.011 36.000 0.00 0.00 0.00 2.43
3835 3941 5.178623 GCTGCCTTGTTAATTACCAAAAACC 59.821 40.000 0.00 0.00 0.00 3.27
3836 3942 6.487299 TGCCTTGTTAATTACCAAAAACCT 57.513 33.333 0.00 0.00 0.00 3.50
3837 3943 6.284459 TGCCTTGTTAATTACCAAAAACCTG 58.716 36.000 0.00 0.00 0.00 4.00
3838 3944 5.699001 GCCTTGTTAATTACCAAAAACCTGG 59.301 40.000 0.00 0.00 42.68 4.45
3847 3953 3.715628 CCAAAAACCTGGTGAGAACTG 57.284 47.619 0.00 0.00 0.00 3.16
3848 3954 3.023832 CCAAAAACCTGGTGAGAACTGT 58.976 45.455 0.00 0.00 0.00 3.55
3849 3955 3.447229 CCAAAAACCTGGTGAGAACTGTT 59.553 43.478 0.00 0.00 0.00 3.16
3850 3956 4.642885 CCAAAAACCTGGTGAGAACTGTTA 59.357 41.667 0.00 0.00 0.00 2.41
3851 3957 5.449999 CCAAAAACCTGGTGAGAACTGTTAC 60.450 44.000 0.00 0.00 0.00 2.50
3852 3958 4.497291 AAACCTGGTGAGAACTGTTACA 57.503 40.909 0.00 0.00 0.00 2.41
3853 3959 4.497291 AACCTGGTGAGAACTGTTACAA 57.503 40.909 0.00 0.00 0.00 2.41
3854 3960 4.497291 ACCTGGTGAGAACTGTTACAAA 57.503 40.909 0.00 0.00 0.00 2.83
3855 3961 4.196971 ACCTGGTGAGAACTGTTACAAAC 58.803 43.478 0.00 0.00 0.00 2.93
3856 3962 4.196193 CCTGGTGAGAACTGTTACAAACA 58.804 43.478 0.00 0.56 39.52 2.83
3857 3963 4.821805 CCTGGTGAGAACTGTTACAAACAT 59.178 41.667 0.00 0.00 41.26 2.71
3858 3964 5.277974 CCTGGTGAGAACTGTTACAAACATG 60.278 44.000 0.00 0.00 41.26 3.21
3859 3965 5.189928 TGGTGAGAACTGTTACAAACATGT 58.810 37.500 0.00 0.00 41.26 3.21
3860 3966 5.650266 TGGTGAGAACTGTTACAAACATGTT 59.350 36.000 4.92 4.92 41.26 2.71
3861 3967 5.971202 GGTGAGAACTGTTACAAACATGTTG 59.029 40.000 12.82 8.99 41.26 3.33
3862 3968 6.183360 GGTGAGAACTGTTACAAACATGTTGA 60.183 38.462 12.82 0.00 41.26 3.18
3863 3969 7.417612 GTGAGAACTGTTACAAACATGTTGAT 58.582 34.615 12.82 5.96 41.26 2.57
3864 3970 7.587757 GTGAGAACTGTTACAAACATGTTGATC 59.412 37.037 12.82 2.14 41.26 2.92
3865 3971 7.281999 TGAGAACTGTTACAAACATGTTGATCA 59.718 33.333 12.82 6.89 41.26 2.92
3866 3972 7.642669 AGAACTGTTACAAACATGTTGATCAG 58.357 34.615 12.82 16.82 41.26 2.90
3867 3973 6.317789 ACTGTTACAAACATGTTGATCAGG 57.682 37.500 12.82 3.30 41.26 3.86
3868 3974 5.119931 TGTTACAAACATGTTGATCAGGC 57.880 39.130 12.82 0.84 36.25 4.85
3869 3975 4.582240 TGTTACAAACATGTTGATCAGGCA 59.418 37.500 12.82 3.44 36.25 4.75
3870 3976 3.648339 ACAAACATGTTGATCAGGCAC 57.352 42.857 12.82 0.00 0.00 5.01
3871 3977 2.957680 ACAAACATGTTGATCAGGCACA 59.042 40.909 12.82 1.34 0.00 4.57
3872 3978 3.575256 ACAAACATGTTGATCAGGCACAT 59.425 39.130 12.82 5.80 0.00 3.21
3873 3979 4.039488 ACAAACATGTTGATCAGGCACATT 59.961 37.500 12.82 2.67 0.00 2.71
3874 3980 4.877378 AACATGTTGATCAGGCACATTT 57.123 36.364 11.07 1.12 0.00 2.32
3875 3981 4.445452 ACATGTTGATCAGGCACATTTC 57.555 40.909 8.48 0.00 0.00 2.17
3876 3982 3.827876 ACATGTTGATCAGGCACATTTCA 59.172 39.130 8.48 0.00 0.00 2.69
3877 3983 4.082408 ACATGTTGATCAGGCACATTTCAG 60.082 41.667 8.48 1.91 0.00 3.02
3878 3984 3.489355 TGTTGATCAGGCACATTTCAGT 58.511 40.909 0.00 0.00 0.00 3.41
3879 3985 3.890756 TGTTGATCAGGCACATTTCAGTT 59.109 39.130 0.00 0.00 0.00 3.16
3880 3986 4.232221 GTTGATCAGGCACATTTCAGTTG 58.768 43.478 0.00 0.00 0.00 3.16
3881 3987 2.821378 TGATCAGGCACATTTCAGTTGG 59.179 45.455 0.00 0.00 0.00 3.77
3882 3988 0.961019 TCAGGCACATTTCAGTTGGC 59.039 50.000 0.00 0.00 0.00 4.52
3883 3989 0.963962 CAGGCACATTTCAGTTGGCT 59.036 50.000 0.00 0.00 35.76 4.75
3884 3990 1.068055 CAGGCACATTTCAGTTGGCTC 60.068 52.381 0.00 0.00 33.02 4.70
3885 3991 0.109597 GGCACATTTCAGTTGGCTCG 60.110 55.000 0.00 0.00 0.00 5.03
3886 3992 0.874390 GCACATTTCAGTTGGCTCGA 59.126 50.000 0.00 0.00 0.00 4.04
3887 3993 1.470098 GCACATTTCAGTTGGCTCGAT 59.530 47.619 0.00 0.00 0.00 3.59
3888 3994 2.476854 GCACATTTCAGTTGGCTCGATC 60.477 50.000 0.00 0.00 0.00 3.69
3889 3995 3.005554 CACATTTCAGTTGGCTCGATCT 58.994 45.455 0.00 0.00 0.00 2.75
3890 3996 3.063180 CACATTTCAGTTGGCTCGATCTC 59.937 47.826 0.00 0.00 0.00 2.75
3891 3997 3.264947 CATTTCAGTTGGCTCGATCTCA 58.735 45.455 0.00 0.00 0.00 3.27
3892 3998 2.662006 TTCAGTTGGCTCGATCTCAG 57.338 50.000 0.00 0.00 0.00 3.35
3893 3999 0.820226 TCAGTTGGCTCGATCTCAGG 59.180 55.000 0.00 0.00 0.00 3.86
3894 4000 0.809241 CAGTTGGCTCGATCTCAGGC 60.809 60.000 7.86 7.86 36.96 4.85
3895 4001 0.975040 AGTTGGCTCGATCTCAGGCT 60.975 55.000 13.98 0.00 37.34 4.58
3896 4002 0.809241 GTTGGCTCGATCTCAGGCTG 60.809 60.000 8.58 8.58 37.34 4.85
3897 4003 0.972471 TTGGCTCGATCTCAGGCTGA 60.972 55.000 17.68 17.68 37.34 4.26
3898 4004 0.972471 TGGCTCGATCTCAGGCTGAA 60.972 55.000 19.29 10.00 37.34 3.02
3899 4005 0.249405 GGCTCGATCTCAGGCTGAAG 60.249 60.000 19.29 13.31 33.64 3.02
3900 4006 0.249405 GCTCGATCTCAGGCTGAAGG 60.249 60.000 19.29 8.07 0.00 3.46
3901 4007 1.110442 CTCGATCTCAGGCTGAAGGT 58.890 55.000 19.29 8.96 0.00 3.50
3902 4008 0.820226 TCGATCTCAGGCTGAAGGTG 59.180 55.000 19.29 6.90 0.00 4.00
3903 4009 0.179089 CGATCTCAGGCTGAAGGTGG 60.179 60.000 19.29 6.51 0.00 4.61
3904 4010 0.179936 GATCTCAGGCTGAAGGTGGG 59.820 60.000 19.29 5.74 0.00 4.61
3905 4011 0.252881 ATCTCAGGCTGAAGGTGGGA 60.253 55.000 19.29 11.31 0.00 4.37
3906 4012 0.906756 TCTCAGGCTGAAGGTGGGAG 60.907 60.000 19.29 4.20 0.00 4.30
3907 4013 1.152030 TCAGGCTGAAGGTGGGAGT 60.152 57.895 16.28 0.00 0.00 3.85
3908 4014 1.002868 CAGGCTGAAGGTGGGAGTG 60.003 63.158 9.42 0.00 0.00 3.51
3909 4015 2.227036 AGGCTGAAGGTGGGAGTGG 61.227 63.158 0.00 0.00 0.00 4.00
3910 4016 2.352805 GCTGAAGGTGGGAGTGGG 59.647 66.667 0.00 0.00 0.00 4.61
3911 4017 3.081554 CTGAAGGTGGGAGTGGGG 58.918 66.667 0.00 0.00 0.00 4.96
3912 4018 1.847968 CTGAAGGTGGGAGTGGGGT 60.848 63.158 0.00 0.00 0.00 4.95
3913 4019 1.386772 TGAAGGTGGGAGTGGGGTT 60.387 57.895 0.00 0.00 0.00 4.11
3914 4020 0.104356 TGAAGGTGGGAGTGGGGTTA 60.104 55.000 0.00 0.00 0.00 2.85
3915 4021 1.069775 GAAGGTGGGAGTGGGGTTAA 58.930 55.000 0.00 0.00 0.00 2.01
3916 4022 1.426215 GAAGGTGGGAGTGGGGTTAAA 59.574 52.381 0.00 0.00 0.00 1.52
3917 4023 1.768265 AGGTGGGAGTGGGGTTAAAT 58.232 50.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.270000 TGTTCCTGAGAATAACTCCTTGAAGA 59.730 38.462 0.00 0.00 44.34 2.87
1 2 6.467677 TGTTCCTGAGAATAACTCCTTGAAG 58.532 40.000 0.00 0.00 44.34 3.02
2 3 6.433847 TGTTCCTGAGAATAACTCCTTGAA 57.566 37.500 0.00 0.00 44.34 2.69
3 4 6.409704 CATGTTCCTGAGAATAACTCCTTGA 58.590 40.000 0.00 0.00 44.34 3.02
4 5 5.065731 GCATGTTCCTGAGAATAACTCCTTG 59.934 44.000 0.00 0.00 44.34 3.61
5 6 5.189180 GCATGTTCCTGAGAATAACTCCTT 58.811 41.667 0.00 0.00 44.34 3.36
6 7 4.225942 TGCATGTTCCTGAGAATAACTCCT 59.774 41.667 0.00 0.00 44.34 3.69
7 8 4.517285 TGCATGTTCCTGAGAATAACTCC 58.483 43.478 0.00 0.00 44.34 3.85
8 9 5.819379 TCATGCATGTTCCTGAGAATAACTC 59.181 40.000 25.43 0.00 45.11 3.01
9 10 5.748402 TCATGCATGTTCCTGAGAATAACT 58.252 37.500 25.43 0.00 33.67 2.24
10 11 6.441093 TTCATGCATGTTCCTGAGAATAAC 57.559 37.500 25.43 0.00 33.67 1.89
11 12 7.994911 ACTATTCATGCATGTTCCTGAGAATAA 59.005 33.333 25.43 8.83 33.67 1.40
12 13 7.512130 ACTATTCATGCATGTTCCTGAGAATA 58.488 34.615 25.43 16.82 33.67 1.75
13 14 6.363065 ACTATTCATGCATGTTCCTGAGAAT 58.637 36.000 25.43 16.62 33.67 2.40
14 15 5.748402 ACTATTCATGCATGTTCCTGAGAA 58.252 37.500 25.43 10.76 0.00 2.87
15 16 5.363562 ACTATTCATGCATGTTCCTGAGA 57.636 39.130 25.43 1.24 0.00 3.27
16 17 6.446781 AAACTATTCATGCATGTTCCTGAG 57.553 37.500 25.43 16.34 0.00 3.35
17 18 6.839124 AAAACTATTCATGCATGTTCCTGA 57.161 33.333 25.43 3.76 0.00 3.86
46 47 9.844790 CATGATCAGATTACAAAAACTAGCAAA 57.155 29.630 0.09 0.00 0.00 3.68
47 48 9.230122 TCATGATCAGATTACAAAAACTAGCAA 57.770 29.630 0.09 0.00 0.00 3.91
48 49 8.791327 TCATGATCAGATTACAAAAACTAGCA 57.209 30.769 0.09 0.00 0.00 3.49
49 50 9.661187 CATCATGATCAGATTACAAAAACTAGC 57.339 33.333 4.86 0.00 0.00 3.42
50 51 9.661187 GCATCATGATCAGATTACAAAAACTAG 57.339 33.333 4.86 0.00 0.00 2.57
51 52 9.399797 AGCATCATGATCAGATTACAAAAACTA 57.600 29.630 4.86 0.00 0.00 2.24
52 53 8.289939 AGCATCATGATCAGATTACAAAAACT 57.710 30.769 4.86 0.00 0.00 2.66
53 54 8.186163 TGAGCATCATGATCAGATTACAAAAAC 58.814 33.333 4.86 0.00 42.56 2.43
54 55 8.283699 TGAGCATCATGATCAGATTACAAAAA 57.716 30.769 4.86 0.00 42.56 1.94
55 56 7.868906 TGAGCATCATGATCAGATTACAAAA 57.131 32.000 4.86 0.00 42.56 2.44
75 76 1.471684 CAGAAGTTCAATGCCCTGAGC 59.528 52.381 5.50 0.00 44.14 4.26
76 77 2.787994 ACAGAAGTTCAATGCCCTGAG 58.212 47.619 5.50 0.00 0.00 3.35
77 78 2.957402 ACAGAAGTTCAATGCCCTGA 57.043 45.000 5.50 0.00 0.00 3.86
88 89 5.047377 TGAAAAGGCAAAGTGAACAGAAGTT 60.047 36.000 0.00 0.00 41.64 2.66
89 90 4.462483 TGAAAAGGCAAAGTGAACAGAAGT 59.538 37.500 0.00 0.00 0.00 3.01
90 91 4.997565 TGAAAAGGCAAAGTGAACAGAAG 58.002 39.130 0.00 0.00 0.00 2.85
91 92 4.142182 CCTGAAAAGGCAAAGTGAACAGAA 60.142 41.667 0.00 0.00 0.00 3.02
92 93 3.381272 CCTGAAAAGGCAAAGTGAACAGA 59.619 43.478 0.00 0.00 0.00 3.41
93 94 3.491447 CCCTGAAAAGGCAAAGTGAACAG 60.491 47.826 0.00 0.00 0.00 3.16
94 95 2.430332 CCCTGAAAAGGCAAAGTGAACA 59.570 45.455 0.00 0.00 0.00 3.18
95 96 3.097877 CCCTGAAAAGGCAAAGTGAAC 57.902 47.619 0.00 0.00 0.00 3.18
105 106 3.575687 AGAAGTTCAATGCCCTGAAAAGG 59.424 43.478 5.50 0.00 37.08 3.11
106 107 4.038402 ACAGAAGTTCAATGCCCTGAAAAG 59.962 41.667 5.50 0.00 37.08 2.27
107 108 3.960102 ACAGAAGTTCAATGCCCTGAAAA 59.040 39.130 5.50 0.00 37.08 2.29
108 109 3.565307 ACAGAAGTTCAATGCCCTGAAA 58.435 40.909 5.50 0.00 37.08 2.69
109 110 3.228188 ACAGAAGTTCAATGCCCTGAA 57.772 42.857 5.50 0.00 32.89 3.02
110 111 2.957402 ACAGAAGTTCAATGCCCTGA 57.043 45.000 5.50 0.00 0.00 3.86
121 122 5.405935 AAAAGGCAAAGTGAACAGAAGTT 57.594 34.783 0.00 0.00 41.64 2.66
122 123 5.405935 AAAAAGGCAAAGTGAACAGAAGT 57.594 34.783 0.00 0.00 0.00 3.01
123 124 5.979517 CCTAAAAAGGCAAAGTGAACAGAAG 59.020 40.000 0.00 0.00 0.00 2.85
124 125 5.654650 TCCTAAAAAGGCAAAGTGAACAGAA 59.345 36.000 0.00 0.00 0.00 3.02
125 126 5.197451 TCCTAAAAAGGCAAAGTGAACAGA 58.803 37.500 0.00 0.00 0.00 3.41
126 127 5.514274 TCCTAAAAAGGCAAAGTGAACAG 57.486 39.130 0.00 0.00 0.00 3.16
127 128 5.010617 GGATCCTAAAAAGGCAAAGTGAACA 59.989 40.000 3.84 0.00 0.00 3.18
128 129 5.243954 AGGATCCTAAAAAGGCAAAGTGAAC 59.756 40.000 14.27 0.00 0.00 3.18
129 130 5.393866 AGGATCCTAAAAAGGCAAAGTGAA 58.606 37.500 14.27 0.00 0.00 3.18
130 131 4.998051 AGGATCCTAAAAAGGCAAAGTGA 58.002 39.130 14.27 0.00 0.00 3.41
131 132 5.336770 GGAAGGATCCTAAAAAGGCAAAGTG 60.337 44.000 16.55 0.00 42.93 3.16
132 133 4.772624 GGAAGGATCCTAAAAAGGCAAAGT 59.227 41.667 16.55 0.00 42.93 2.66
133 134 5.330455 GGAAGGATCCTAAAAAGGCAAAG 57.670 43.478 16.55 0.00 42.93 2.77
146 147 2.370519 GAGGGAGCTAAAGGAAGGATCC 59.629 54.545 2.48 2.48 46.98 3.36
147 148 3.070878 CAGAGGGAGCTAAAGGAAGGATC 59.929 52.174 0.00 0.00 0.00 3.36
148 149 3.044894 CAGAGGGAGCTAAAGGAAGGAT 58.955 50.000 0.00 0.00 0.00 3.24
149 150 2.044492 TCAGAGGGAGCTAAAGGAAGGA 59.956 50.000 0.00 0.00 0.00 3.36
150 151 2.433970 CTCAGAGGGAGCTAAAGGAAGG 59.566 54.545 0.00 0.00 36.69 3.46
151 152 3.370104 TCTCAGAGGGAGCTAAAGGAAG 58.630 50.000 0.00 0.00 43.70 3.46
152 153 3.245803 ACTCTCAGAGGGAGCTAAAGGAA 60.246 47.826 3.57 0.00 43.70 3.36
153 154 2.313342 ACTCTCAGAGGGAGCTAAAGGA 59.687 50.000 3.57 0.00 43.70 3.36
154 155 2.745968 ACTCTCAGAGGGAGCTAAAGG 58.254 52.381 3.57 0.00 43.70 3.11
155 156 4.466015 AGAAACTCTCAGAGGGAGCTAAAG 59.534 45.833 3.57 0.00 43.70 1.85
156 157 4.221703 CAGAAACTCTCAGAGGGAGCTAAA 59.778 45.833 3.57 0.00 43.70 1.85
157 158 3.766591 CAGAAACTCTCAGAGGGAGCTAA 59.233 47.826 3.57 0.00 43.70 3.09
158 159 3.360867 CAGAAACTCTCAGAGGGAGCTA 58.639 50.000 3.57 0.00 43.70 3.32
159 160 2.178580 CAGAAACTCTCAGAGGGAGCT 58.821 52.381 3.57 0.00 43.70 4.09
160 161 1.405391 GCAGAAACTCTCAGAGGGAGC 60.405 57.143 3.57 0.00 43.70 4.70
161 162 2.178580 AGCAGAAACTCTCAGAGGGAG 58.821 52.381 3.57 0.00 45.49 4.30
162 163 2.317371 AGCAGAAACTCTCAGAGGGA 57.683 50.000 3.57 0.00 33.35 4.20
163 164 5.774690 AGATATAGCAGAAACTCTCAGAGGG 59.225 44.000 6.64 0.00 33.35 4.30
164 165 6.716628 AGAGATATAGCAGAAACTCTCAGAGG 59.283 42.308 6.64 0.00 33.35 3.69
165 166 7.750229 AGAGATATAGCAGAAACTCTCAGAG 57.250 40.000 0.00 0.00 33.27 3.35
166 167 7.998383 AGAAGAGATATAGCAGAAACTCTCAGA 59.002 37.037 0.00 0.00 34.33 3.27
167 168 8.169977 AGAAGAGATATAGCAGAAACTCTCAG 57.830 38.462 0.00 0.00 34.33 3.35
168 169 8.532186 AAGAAGAGATATAGCAGAAACTCTCA 57.468 34.615 0.00 0.00 34.33 3.27
169 170 8.850156 AGAAGAAGAGATATAGCAGAAACTCTC 58.150 37.037 0.00 0.00 34.33 3.20
170 171 8.766994 AGAAGAAGAGATATAGCAGAAACTCT 57.233 34.615 0.00 0.00 36.48 3.24
171 172 9.463443 GAAGAAGAAGAGATATAGCAGAAACTC 57.537 37.037 0.00 0.00 0.00 3.01
172 173 9.200817 AGAAGAAGAAGAGATATAGCAGAAACT 57.799 33.333 0.00 0.00 0.00 2.66
173 174 9.816354 AAGAAGAAGAAGAGATATAGCAGAAAC 57.184 33.333 0.00 0.00 0.00 2.78
183 184 9.342308 TGCAAAAGAAAAGAAGAAGAAGAGATA 57.658 29.630 0.00 0.00 0.00 1.98
184 185 8.230472 TGCAAAAGAAAAGAAGAAGAAGAGAT 57.770 30.769 0.00 0.00 0.00 2.75
185 186 7.554118 TCTGCAAAAGAAAAGAAGAAGAAGAGA 59.446 33.333 0.00 0.00 29.54 3.10
186 187 7.701445 TCTGCAAAAGAAAAGAAGAAGAAGAG 58.299 34.615 0.00 0.00 29.54 2.85
187 188 7.630242 TCTGCAAAAGAAAAGAAGAAGAAGA 57.370 32.000 0.00 0.00 29.54 2.87
188 189 7.972832 AGTTCTGCAAAAGAAAAGAAGAAGAAG 59.027 33.333 0.00 0.00 46.51 2.85
189 190 7.830739 AGTTCTGCAAAAGAAAAGAAGAAGAA 58.169 30.769 0.00 0.00 46.51 2.52
190 191 7.337942 AGAGTTCTGCAAAAGAAAAGAAGAAGA 59.662 33.333 0.00 0.00 46.51 2.87
191 192 7.431668 CAGAGTTCTGCAAAAGAAAAGAAGAAG 59.568 37.037 0.00 0.00 46.51 2.85
192 193 7.094205 ACAGAGTTCTGCAAAAGAAAAGAAGAA 60.094 33.333 8.99 0.00 46.51 2.52
193 194 6.375455 ACAGAGTTCTGCAAAAGAAAAGAAGA 59.625 34.615 8.99 0.00 46.51 2.87
194 195 6.558909 ACAGAGTTCTGCAAAAGAAAAGAAG 58.441 36.000 8.99 0.00 46.51 2.85
195 196 6.515272 ACAGAGTTCTGCAAAAGAAAAGAA 57.485 33.333 8.99 0.00 46.51 2.52
196 197 7.716998 AGATACAGAGTTCTGCAAAAGAAAAGA 59.283 33.333 8.99 0.00 46.51 2.52
197 198 7.802251 CAGATACAGAGTTCTGCAAAAGAAAAG 59.198 37.037 8.99 0.00 46.51 2.27
198 199 7.498900 TCAGATACAGAGTTCTGCAAAAGAAAA 59.501 33.333 8.99 0.00 46.51 2.29
199 200 6.992123 TCAGATACAGAGTTCTGCAAAAGAAA 59.008 34.615 8.99 0.00 46.51 2.52
209 210 5.736813 AGTACGAGTCAGATACAGAGTTCT 58.263 41.667 0.00 0.00 0.00 3.01
210 211 6.018832 GGTAGTACGAGTCAGATACAGAGTTC 60.019 46.154 0.00 0.00 0.00 3.01
211 212 5.816777 GGTAGTACGAGTCAGATACAGAGTT 59.183 44.000 0.00 0.00 0.00 3.01
212 213 5.358922 GGTAGTACGAGTCAGATACAGAGT 58.641 45.833 0.00 0.00 0.00 3.24
213 214 4.751098 GGGTAGTACGAGTCAGATACAGAG 59.249 50.000 0.00 0.00 0.00 3.35
214 215 4.408270 AGGGTAGTACGAGTCAGATACAGA 59.592 45.833 0.00 0.00 0.00 3.41
215 216 4.706035 AGGGTAGTACGAGTCAGATACAG 58.294 47.826 0.00 0.00 0.00 2.74
216 217 4.767578 AGGGTAGTACGAGTCAGATACA 57.232 45.455 0.00 0.00 0.00 2.29
217 218 5.587844 TCAAAGGGTAGTACGAGTCAGATAC 59.412 44.000 0.00 0.00 0.00 2.24
218 219 5.748402 TCAAAGGGTAGTACGAGTCAGATA 58.252 41.667 0.00 0.00 0.00 1.98
219 220 4.597004 TCAAAGGGTAGTACGAGTCAGAT 58.403 43.478 0.00 0.00 0.00 2.90
220 221 4.008330 CTCAAAGGGTAGTACGAGTCAGA 58.992 47.826 0.00 0.00 0.00 3.27
221 222 3.427773 GCTCAAAGGGTAGTACGAGTCAG 60.428 52.174 0.00 0.00 0.00 3.51
222 223 2.490903 GCTCAAAGGGTAGTACGAGTCA 59.509 50.000 0.00 0.00 0.00 3.41
223 224 2.754002 AGCTCAAAGGGTAGTACGAGTC 59.246 50.000 0.00 0.00 0.00 3.36
224 225 2.492484 CAGCTCAAAGGGTAGTACGAGT 59.508 50.000 0.00 0.00 0.00 4.18
225 226 2.753452 TCAGCTCAAAGGGTAGTACGAG 59.247 50.000 0.00 0.00 0.00 4.18
226 227 2.799017 TCAGCTCAAAGGGTAGTACGA 58.201 47.619 0.00 0.00 0.00 3.43
227 228 3.587797 TTCAGCTCAAAGGGTAGTACG 57.412 47.619 0.00 0.00 0.00 3.67
228 229 6.466885 TCTATTCAGCTCAAAGGGTAGTAC 57.533 41.667 0.00 0.00 0.00 2.73
229 230 7.676683 ATTCTATTCAGCTCAAAGGGTAGTA 57.323 36.000 0.00 0.00 0.00 1.82
230 231 6.567602 ATTCTATTCAGCTCAAAGGGTAGT 57.432 37.500 0.00 0.00 0.00 2.73
231 232 9.566432 AAATATTCTATTCAGCTCAAAGGGTAG 57.434 33.333 0.00 0.00 0.00 3.18
232 233 9.342308 CAAATATTCTATTCAGCTCAAAGGGTA 57.658 33.333 0.00 0.00 0.00 3.69
233 234 8.055181 TCAAATATTCTATTCAGCTCAAAGGGT 58.945 33.333 0.00 0.00 0.00 4.34
234 235 8.348507 GTCAAATATTCTATTCAGCTCAAAGGG 58.651 37.037 0.00 0.00 0.00 3.95
235 236 8.896744 TGTCAAATATTCTATTCAGCTCAAAGG 58.103 33.333 0.00 0.00 0.00 3.11
236 237 9.713740 GTGTCAAATATTCTATTCAGCTCAAAG 57.286 33.333 0.00 0.00 0.00 2.77
237 238 8.677300 GGTGTCAAATATTCTATTCAGCTCAAA 58.323 33.333 0.00 0.00 0.00 2.69
238 239 8.049117 AGGTGTCAAATATTCTATTCAGCTCAA 58.951 33.333 0.00 0.00 0.00 3.02
239 240 7.568349 AGGTGTCAAATATTCTATTCAGCTCA 58.432 34.615 0.00 0.00 0.00 4.26
240 241 8.443953 AAGGTGTCAAATATTCTATTCAGCTC 57.556 34.615 0.00 0.00 32.57 4.09
241 242 8.680903 CAAAGGTGTCAAATATTCTATTCAGCT 58.319 33.333 0.00 0.00 34.63 4.24
242 243 8.677300 TCAAAGGTGTCAAATATTCTATTCAGC 58.323 33.333 0.00 0.00 0.00 4.26
245 246 9.455847 GCATCAAAGGTGTCAAATATTCTATTC 57.544 33.333 0.00 0.00 0.00 1.75
246 247 8.416329 GGCATCAAAGGTGTCAAATATTCTATT 58.584 33.333 0.00 0.00 0.00 1.73
247 248 7.781693 AGGCATCAAAGGTGTCAAATATTCTAT 59.218 33.333 0.00 0.00 0.00 1.98
248 249 7.118723 AGGCATCAAAGGTGTCAAATATTCTA 58.881 34.615 0.00 0.00 0.00 2.10
249 250 5.954150 AGGCATCAAAGGTGTCAAATATTCT 59.046 36.000 0.00 0.00 0.00 2.40
250 251 6.212888 AGGCATCAAAGGTGTCAAATATTC 57.787 37.500 0.00 0.00 0.00 1.75
251 252 6.610075 AAGGCATCAAAGGTGTCAAATATT 57.390 33.333 0.00 0.00 0.00 1.28
252 253 5.163622 CGAAGGCATCAAAGGTGTCAAATAT 60.164 40.000 0.00 0.00 0.00 1.28
253 254 4.155826 CGAAGGCATCAAAGGTGTCAAATA 59.844 41.667 0.00 0.00 0.00 1.40
254 255 3.057315 CGAAGGCATCAAAGGTGTCAAAT 60.057 43.478 0.00 0.00 0.00 2.32
255 256 2.293122 CGAAGGCATCAAAGGTGTCAAA 59.707 45.455 0.00 0.00 0.00 2.69
256 257 1.879380 CGAAGGCATCAAAGGTGTCAA 59.121 47.619 0.00 0.00 0.00 3.18
257 258 1.202758 ACGAAGGCATCAAAGGTGTCA 60.203 47.619 0.00 0.00 0.00 3.58
258 259 1.523758 ACGAAGGCATCAAAGGTGTC 58.476 50.000 0.00 0.00 0.00 3.67
259 260 1.981256 AACGAAGGCATCAAAGGTGT 58.019 45.000 0.00 0.00 0.00 4.16
260 261 2.034558 ACAAACGAAGGCATCAAAGGTG 59.965 45.455 0.00 0.00 0.00 4.00
261 262 2.306847 ACAAACGAAGGCATCAAAGGT 58.693 42.857 0.00 0.00 0.00 3.50
262 263 3.369546 AACAAACGAAGGCATCAAAGG 57.630 42.857 0.00 0.00 0.00 3.11
263 264 6.820470 TTTTAACAAACGAAGGCATCAAAG 57.180 33.333 0.00 0.00 0.00 2.77
287 288 2.415857 TGCGTGTGTGTACGTTCTTTTT 59.584 40.909 0.00 0.00 45.36 1.94
288 289 2.001159 TGCGTGTGTGTACGTTCTTTT 58.999 42.857 0.00 0.00 45.36 2.27
289 290 1.642728 TGCGTGTGTGTACGTTCTTT 58.357 45.000 0.00 0.00 45.36 2.52
290 291 1.860676 ATGCGTGTGTGTACGTTCTT 58.139 45.000 0.00 0.00 45.36 2.52
291 292 2.322161 GTATGCGTGTGTGTACGTTCT 58.678 47.619 0.00 0.00 45.36 3.01
292 293 1.387756 GGTATGCGTGTGTGTACGTTC 59.612 52.381 0.00 0.00 45.36 3.95
293 294 1.421382 GGTATGCGTGTGTGTACGTT 58.579 50.000 0.00 0.00 45.36 3.99
294 295 0.388907 GGGTATGCGTGTGTGTACGT 60.389 55.000 0.00 0.00 45.36 3.57
295 296 0.108992 AGGGTATGCGTGTGTGTACG 60.109 55.000 0.00 0.00 46.28 3.67
296 297 2.945447 TAGGGTATGCGTGTGTGTAC 57.055 50.000 0.00 0.00 0.00 2.90
297 298 2.363038 GGATAGGGTATGCGTGTGTGTA 59.637 50.000 0.00 0.00 0.00 2.90
298 299 1.138266 GGATAGGGTATGCGTGTGTGT 59.862 52.381 0.00 0.00 0.00 3.72
299 300 1.412710 AGGATAGGGTATGCGTGTGTG 59.587 52.381 0.00 0.00 0.00 3.82
300 301 1.789523 AGGATAGGGTATGCGTGTGT 58.210 50.000 0.00 0.00 0.00 3.72
301 302 2.910688 AAGGATAGGGTATGCGTGTG 57.089 50.000 0.00 0.00 0.00 3.82
302 303 4.157246 TCATAAGGATAGGGTATGCGTGT 58.843 43.478 0.00 0.00 0.00 4.49
303 304 4.748892 CTCATAAGGATAGGGTATGCGTG 58.251 47.826 0.00 0.00 0.00 5.34
304 305 3.195825 GCTCATAAGGATAGGGTATGCGT 59.804 47.826 0.00 0.00 0.00 5.24
305 306 3.449018 AGCTCATAAGGATAGGGTATGCG 59.551 47.826 0.00 0.00 0.00 4.73
306 307 4.141824 GGAGCTCATAAGGATAGGGTATGC 60.142 50.000 17.19 0.00 0.00 3.14
307 308 5.276440 AGGAGCTCATAAGGATAGGGTATG 58.724 45.833 17.19 0.00 0.00 2.39
308 309 5.560467 AGGAGCTCATAAGGATAGGGTAT 57.440 43.478 17.19 0.00 0.00 2.73
309 310 5.162870 TGAAGGAGCTCATAAGGATAGGGTA 60.163 44.000 17.19 0.00 0.00 3.69
310 311 3.933239 AGGAGCTCATAAGGATAGGGT 57.067 47.619 17.19 0.00 0.00 4.34
311 312 4.163427 TGAAGGAGCTCATAAGGATAGGG 58.837 47.826 17.19 0.00 0.00 3.53
312 313 5.541868 TCTTGAAGGAGCTCATAAGGATAGG 59.458 44.000 17.19 0.00 0.00 2.57
313 314 6.493115 TCTCTTGAAGGAGCTCATAAGGATAG 59.507 42.308 17.19 4.21 33.70 2.08
314 315 6.266558 GTCTCTTGAAGGAGCTCATAAGGATA 59.733 42.308 17.19 0.00 33.70 2.59
315 316 5.070313 GTCTCTTGAAGGAGCTCATAAGGAT 59.930 44.000 17.19 0.00 33.70 3.24
316 317 4.404073 GTCTCTTGAAGGAGCTCATAAGGA 59.596 45.833 17.19 5.89 33.70 3.36
317 318 4.405358 AGTCTCTTGAAGGAGCTCATAAGG 59.595 45.833 17.19 1.31 33.70 2.69
318 319 5.350633 CAGTCTCTTGAAGGAGCTCATAAG 58.649 45.833 17.19 10.24 33.70 1.73
319 320 4.161189 CCAGTCTCTTGAAGGAGCTCATAA 59.839 45.833 17.19 0.00 33.70 1.90
320 321 3.703556 CCAGTCTCTTGAAGGAGCTCATA 59.296 47.826 17.19 0.00 33.70 2.15
321 322 2.500910 CCAGTCTCTTGAAGGAGCTCAT 59.499 50.000 17.19 5.25 33.70 2.90
322 323 1.898472 CCAGTCTCTTGAAGGAGCTCA 59.102 52.381 17.19 0.00 33.70 4.26
323 324 1.206849 CCCAGTCTCTTGAAGGAGCTC 59.793 57.143 4.71 4.71 33.70 4.09
324 325 1.274712 CCCAGTCTCTTGAAGGAGCT 58.725 55.000 0.00 0.00 33.70 4.09
325 326 0.392327 GCCCAGTCTCTTGAAGGAGC 60.392 60.000 0.00 0.00 33.70 4.70
326 327 0.251634 GGCCCAGTCTCTTGAAGGAG 59.748 60.000 0.00 0.00 34.88 3.69
327 328 1.544825 CGGCCCAGTCTCTTGAAGGA 61.545 60.000 0.00 0.00 0.00 3.36
328 329 1.078848 CGGCCCAGTCTCTTGAAGG 60.079 63.158 0.00 0.00 0.00 3.46
329 330 0.390472 GTCGGCCCAGTCTCTTGAAG 60.390 60.000 0.00 0.00 0.00 3.02
330 331 1.118965 TGTCGGCCCAGTCTCTTGAA 61.119 55.000 0.00 0.00 0.00 2.69
331 332 0.904865 ATGTCGGCCCAGTCTCTTGA 60.905 55.000 0.00 0.00 0.00 3.02
332 333 0.824109 TATGTCGGCCCAGTCTCTTG 59.176 55.000 0.00 0.00 0.00 3.02
333 334 1.689273 GATATGTCGGCCCAGTCTCTT 59.311 52.381 0.00 0.00 0.00 2.85
334 335 1.333177 GATATGTCGGCCCAGTCTCT 58.667 55.000 0.00 0.00 0.00 3.10
335 336 1.040646 TGATATGTCGGCCCAGTCTC 58.959 55.000 0.00 0.00 0.00 3.36
336 337 1.722034 ATGATATGTCGGCCCAGTCT 58.278 50.000 0.00 0.00 0.00 3.24
337 338 2.550830 AATGATATGTCGGCCCAGTC 57.449 50.000 0.00 0.00 0.00 3.51
338 339 2.951642 CAAAATGATATGTCGGCCCAGT 59.048 45.455 0.00 0.00 0.00 4.00
339 340 3.213506 TCAAAATGATATGTCGGCCCAG 58.786 45.455 0.00 0.00 0.00 4.45
340 341 3.118075 TCTCAAAATGATATGTCGGCCCA 60.118 43.478 0.00 0.00 0.00 5.36
341 342 3.476552 TCTCAAAATGATATGTCGGCCC 58.523 45.455 0.00 0.00 0.00 5.80
342 343 5.695851 AATCTCAAAATGATATGTCGGCC 57.304 39.130 0.00 0.00 0.00 6.13
343 344 6.792250 CGTAAATCTCAAAATGATATGTCGGC 59.208 38.462 0.00 0.00 0.00 5.54
344 345 8.072238 TCGTAAATCTCAAAATGATATGTCGG 57.928 34.615 0.00 0.00 0.00 4.79
345 346 9.573102 CTTCGTAAATCTCAAAATGATATGTCG 57.427 33.333 0.00 0.00 0.00 4.35
355 356 8.234546 GCCTAAATGACTTCGTAAATCTCAAAA 58.765 33.333 0.00 0.00 0.00 2.44
356 357 7.412563 CGCCTAAATGACTTCGTAAATCTCAAA 60.413 37.037 0.00 0.00 0.00 2.69
357 358 6.035650 CGCCTAAATGACTTCGTAAATCTCAA 59.964 38.462 0.00 0.00 0.00 3.02
358 359 5.518847 CGCCTAAATGACTTCGTAAATCTCA 59.481 40.000 0.00 0.00 0.00 3.27
359 360 5.556570 GCGCCTAAATGACTTCGTAAATCTC 60.557 44.000 0.00 0.00 0.00 2.75
360 361 4.270325 GCGCCTAAATGACTTCGTAAATCT 59.730 41.667 0.00 0.00 0.00 2.40
361 362 4.515432 GCGCCTAAATGACTTCGTAAATC 58.485 43.478 0.00 0.00 0.00 2.17
362 363 3.311596 GGCGCCTAAATGACTTCGTAAAT 59.688 43.478 22.15 0.00 0.00 1.40
363 364 2.674357 GGCGCCTAAATGACTTCGTAAA 59.326 45.455 22.15 0.00 0.00 2.01
364 365 2.093869 AGGCGCCTAAATGACTTCGTAA 60.094 45.455 31.86 0.00 0.00 3.18
365 366 1.479323 AGGCGCCTAAATGACTTCGTA 59.521 47.619 31.86 0.00 0.00 3.43
366 367 0.249398 AGGCGCCTAAATGACTTCGT 59.751 50.000 31.86 0.00 0.00 3.85
367 368 0.931005 GAGGCGCCTAAATGACTTCG 59.069 55.000 32.97 0.00 0.00 3.79
368 369 0.931005 CGAGGCGCCTAAATGACTTC 59.069 55.000 32.97 13.08 0.00 3.01
369 370 0.249398 ACGAGGCGCCTAAATGACTT 59.751 50.000 32.97 6.30 0.00 3.01
370 371 0.179108 GACGAGGCGCCTAAATGACT 60.179 55.000 32.97 4.00 0.00 3.41
371 372 1.480219 CGACGAGGCGCCTAAATGAC 61.480 60.000 32.97 15.35 0.00 3.06
372 373 1.226859 CGACGAGGCGCCTAAATGA 60.227 57.895 32.97 0.00 0.00 2.57
373 374 1.480219 GACGACGAGGCGCCTAAATG 61.480 60.000 32.97 21.96 33.86 2.32
374 375 1.226888 GACGACGAGGCGCCTAAAT 60.227 57.895 32.97 18.42 33.86 1.40
375 376 2.180017 GACGACGAGGCGCCTAAA 59.820 61.111 32.97 0.00 33.86 1.85
388 389 3.599792 GAAGGCGTTCCGTCGACGA 62.600 63.158 37.65 21.13 44.28 4.20
389 390 3.170585 GAAGGCGTTCCGTCGACG 61.171 66.667 30.33 30.33 44.28 5.12
390 391 1.800713 GAGAAGGCGTTCCGTCGAC 60.801 63.158 15.23 5.18 44.24 4.20
391 392 2.564975 GAGAAGGCGTTCCGTCGA 59.435 61.111 15.23 0.00 44.24 4.20
392 393 2.506438 GGAGAAGGCGTTCCGTCG 60.506 66.667 15.23 0.00 44.24 5.12
393 394 2.125633 GGGAGAAGGCGTTCCGTC 60.126 66.667 15.23 7.58 40.58 4.79
394 395 2.920912 TGGGAGAAGGCGTTCCGT 60.921 61.111 15.23 0.00 37.47 4.69
395 396 1.601419 TAGTGGGAGAAGGCGTTCCG 61.601 60.000 15.23 0.00 37.47 4.30
396 397 0.611714 TTAGTGGGAGAAGGCGTTCC 59.388 55.000 15.23 7.21 32.48 3.62
397 398 2.467566 TTTAGTGGGAGAAGGCGTTC 57.532 50.000 11.17 11.17 0.00 3.95
398 399 2.779506 CTTTTAGTGGGAGAAGGCGTT 58.220 47.619 0.00 0.00 0.00 4.84
399 400 1.610886 GCTTTTAGTGGGAGAAGGCGT 60.611 52.381 0.00 0.00 0.00 5.68
400 401 1.087501 GCTTTTAGTGGGAGAAGGCG 58.912 55.000 0.00 0.00 0.00 5.52
401 402 1.087501 CGCTTTTAGTGGGAGAAGGC 58.912 55.000 0.00 0.00 0.00 4.35
402 403 1.087501 GCGCTTTTAGTGGGAGAAGG 58.912 55.000 0.00 0.00 0.00 3.46
403 404 1.808411 TGCGCTTTTAGTGGGAGAAG 58.192 50.000 9.73 0.00 0.00 2.85
404 405 2.290008 TGATGCGCTTTTAGTGGGAGAA 60.290 45.455 9.73 0.00 0.00 2.87
405 406 1.277842 TGATGCGCTTTTAGTGGGAGA 59.722 47.619 9.73 0.00 0.00 3.71
406 407 1.737838 TGATGCGCTTTTAGTGGGAG 58.262 50.000 9.73 0.00 0.00 4.30
407 408 2.288666 GATGATGCGCTTTTAGTGGGA 58.711 47.619 9.73 0.00 0.00 4.37
408 409 1.003545 CGATGATGCGCTTTTAGTGGG 60.004 52.381 9.73 0.00 0.00 4.61
409 410 1.933181 TCGATGATGCGCTTTTAGTGG 59.067 47.619 9.73 0.00 0.00 4.00
410 411 3.656651 TTCGATGATGCGCTTTTAGTG 57.343 42.857 9.73 0.00 0.00 2.74
411 412 4.678509 TTTTCGATGATGCGCTTTTAGT 57.321 36.364 9.73 0.00 0.00 2.24
412 413 7.663630 TTTATTTTCGATGATGCGCTTTTAG 57.336 32.000 9.73 0.00 0.00 1.85
413 414 7.378461 GGATTTATTTTCGATGATGCGCTTTTA 59.622 33.333 9.73 0.00 0.00 1.52
414 415 6.198966 GGATTTATTTTCGATGATGCGCTTTT 59.801 34.615 9.73 0.00 0.00 2.27
415 416 5.687285 GGATTTATTTTCGATGATGCGCTTT 59.313 36.000 9.73 0.00 0.00 3.51
416 417 5.215160 GGATTTATTTTCGATGATGCGCTT 58.785 37.500 9.73 0.55 0.00 4.68
417 418 4.275689 TGGATTTATTTTCGATGATGCGCT 59.724 37.500 9.73 0.00 0.00 5.92
418 419 4.536065 TGGATTTATTTTCGATGATGCGC 58.464 39.130 0.00 0.00 0.00 6.09
419 420 6.429624 TCTTGGATTTATTTTCGATGATGCG 58.570 36.000 0.00 0.00 0.00 4.73
420 421 8.807667 ATTCTTGGATTTATTTTCGATGATGC 57.192 30.769 0.00 0.00 0.00 3.91
425 426 9.398170 CGCATTATTCTTGGATTTATTTTCGAT 57.602 29.630 0.00 0.00 0.00 3.59
426 427 8.616942 TCGCATTATTCTTGGATTTATTTTCGA 58.383 29.630 0.00 0.00 0.00 3.71
427 428 8.781067 TCGCATTATTCTTGGATTTATTTTCG 57.219 30.769 0.00 0.00 0.00 3.46
428 429 9.736023 ACTCGCATTATTCTTGGATTTATTTTC 57.264 29.630 0.00 0.00 0.00 2.29
429 430 9.520204 CACTCGCATTATTCTTGGATTTATTTT 57.480 29.630 0.00 0.00 0.00 1.82
430 431 7.649306 GCACTCGCATTATTCTTGGATTTATTT 59.351 33.333 0.00 0.00 38.36 1.40
431 432 7.141363 GCACTCGCATTATTCTTGGATTTATT 58.859 34.615 0.00 0.00 38.36 1.40
432 433 6.262944 TGCACTCGCATTATTCTTGGATTTAT 59.737 34.615 0.00 0.00 45.36 1.40
433 434 5.588246 TGCACTCGCATTATTCTTGGATTTA 59.412 36.000 0.00 0.00 45.36 1.40
434 435 4.398988 TGCACTCGCATTATTCTTGGATTT 59.601 37.500 0.00 0.00 45.36 2.17
435 436 3.947196 TGCACTCGCATTATTCTTGGATT 59.053 39.130 0.00 0.00 45.36 3.01
436 437 3.544684 TGCACTCGCATTATTCTTGGAT 58.455 40.909 0.00 0.00 45.36 3.41
437 438 2.984562 TGCACTCGCATTATTCTTGGA 58.015 42.857 0.00 0.00 45.36 3.53
451 452 0.390340 TCTCCAACGAGCATGCACTC 60.390 55.000 21.98 8.78 35.94 3.51
452 453 0.251354 ATCTCCAACGAGCATGCACT 59.749 50.000 21.98 0.00 35.94 4.40
453 454 0.376152 CATCTCCAACGAGCATGCAC 59.624 55.000 21.98 13.43 35.94 4.57
454 455 1.371337 GCATCTCCAACGAGCATGCA 61.371 55.000 21.98 0.00 35.94 3.96
455 456 1.354506 GCATCTCCAACGAGCATGC 59.645 57.895 10.51 10.51 35.94 4.06
456 457 1.442526 GGGCATCTCCAACGAGCATG 61.443 60.000 0.00 0.00 35.94 4.06
457 458 1.153086 GGGCATCTCCAACGAGCAT 60.153 57.895 0.00 0.00 35.94 3.79
458 459 2.268920 GGGCATCTCCAACGAGCA 59.731 61.111 0.00 0.00 35.94 4.26
459 460 1.817099 CAGGGCATCTCCAACGAGC 60.817 63.158 0.00 0.00 35.94 5.03
460 461 1.153289 CCAGGGCATCTCCAACGAG 60.153 63.158 0.00 0.00 37.48 4.18
461 462 2.669133 CCCAGGGCATCTCCAACGA 61.669 63.158 0.00 0.00 36.21 3.85
462 463 2.124570 CCCAGGGCATCTCCAACG 60.125 66.667 0.00 0.00 36.21 4.10
463 464 1.379044 CACCCAGGGCATCTCCAAC 60.379 63.158 4.91 0.00 36.21 3.77
464 465 3.089838 CACCCAGGGCATCTCCAA 58.910 61.111 4.91 0.00 36.21 3.53
465 466 3.731728 GCACCCAGGGCATCTCCA 61.732 66.667 4.91 0.00 36.21 3.86
466 467 2.786512 TTTGCACCCAGGGCATCTCC 62.787 60.000 4.91 0.00 41.58 3.71
467 468 0.685458 ATTTGCACCCAGGGCATCTC 60.685 55.000 4.91 0.00 41.58 2.75
468 469 0.630673 TATTTGCACCCAGGGCATCT 59.369 50.000 4.91 0.00 41.58 2.90
469 470 1.484038 TTATTTGCACCCAGGGCATC 58.516 50.000 4.91 0.00 41.58 3.91
470 471 3.707821 TTATTTGCACCCAGGGCAT 57.292 47.368 4.91 0.00 41.58 4.40
961 962 1.543358 CAAGAGAAGAGGGCAAAAGGC 59.457 52.381 0.00 0.00 43.74 4.35
1113 1122 0.328258 CCTCCAATTCTTGACCGGGT 59.672 55.000 6.32 0.00 0.00 5.28
1177 1186 2.225908 ACCCACTATCTTCCTTCCCAGT 60.226 50.000 0.00 0.00 0.00 4.00
1280 1289 1.961793 TGGACGGAACAAGTTCTTGG 58.038 50.000 15.51 5.56 39.45 3.61
1306 1319 2.423538 ACAGAAAAGTTTCTTGCGTGCT 59.576 40.909 3.51 0.00 44.70 4.40
1307 1320 2.531508 CACAGAAAAGTTTCTTGCGTGC 59.468 45.455 3.51 0.00 44.70 5.34
1308 1321 2.531508 GCACAGAAAAGTTTCTTGCGTG 59.468 45.455 17.26 15.75 44.70 5.34
1309 1322 2.423538 AGCACAGAAAAGTTTCTTGCGT 59.576 40.909 21.57 10.30 44.70 5.24
1450 1463 9.760077 TTAAATTTAAAATTAGCAACACCCGAA 57.240 25.926 8.20 0.00 0.00 4.30
1694 1794 2.334838 CGACTAACAAGAAACCCCTCG 58.665 52.381 0.00 0.00 0.00 4.63
1895 1995 7.502177 TCGTCAGTATTAAGAAAAGCTAACG 57.498 36.000 0.00 0.00 0.00 3.18
1897 1997 7.547722 TGCATCGTCAGTATTAAGAAAAGCTAA 59.452 33.333 0.00 0.00 0.00 3.09
2077 2177 0.040336 CTGAAGTGCTGCAGTTGCTG 60.040 55.000 26.07 16.27 42.66 4.41
2464 2565 2.283298 CTATTGCATGTCGTTGGAGCT 58.717 47.619 0.00 0.00 0.00 4.09
2692 2793 3.509442 TGGGATTGTTTTTCTCCAGCAT 58.491 40.909 0.00 0.00 0.00 3.79
2854 2955 6.458888 GCTTCTTGCTACTTGAACTCTTGTTT 60.459 38.462 0.00 0.00 36.15 2.83
2855 2956 5.008118 GCTTCTTGCTACTTGAACTCTTGTT 59.992 40.000 0.00 0.00 37.66 2.83
2994 3095 8.989653 ATAGCTAGACAACACTAAAGTCTTTC 57.010 34.615 0.00 0.00 42.25 2.62
3632 3736 5.541845 TGATGATTCCATTAACTCTAGCGG 58.458 41.667 0.00 0.00 32.09 5.52
3666 3770 0.533308 TCAACTTGTACCGGGCACAC 60.533 55.000 6.32 0.00 0.00 3.82
3668 3772 1.467342 GAATCAACTTGTACCGGGCAC 59.533 52.381 6.32 3.56 0.00 5.01
3679 3785 4.261801 CGTCATTACCCTGGAATCAACTT 58.738 43.478 0.00 0.00 0.00 2.66
3690 3796 2.238646 TCAAATCAGGCGTCATTACCCT 59.761 45.455 0.00 0.00 0.00 4.34
3691 3797 2.639065 TCAAATCAGGCGTCATTACCC 58.361 47.619 0.00 0.00 0.00 3.69
3763 3869 5.944007 TGAGCCTAAGGTTCTGGAATAAAAC 59.056 40.000 0.00 0.00 33.98 2.43
3804 3910 5.163713 GGTAATTAACAAGGCAGCTCTCTTG 60.164 44.000 18.73 18.73 44.14 3.02
3805 3911 4.944317 GGTAATTAACAAGGCAGCTCTCTT 59.056 41.667 0.00 0.00 0.00 2.85
3806 3912 4.019321 TGGTAATTAACAAGGCAGCTCTCT 60.019 41.667 0.00 0.00 0.00 3.10
3807 3913 4.261801 TGGTAATTAACAAGGCAGCTCTC 58.738 43.478 0.00 0.00 0.00 3.20
3808 3914 4.301072 TGGTAATTAACAAGGCAGCTCT 57.699 40.909 0.00 0.00 0.00 4.09
3809 3915 5.385509 TTTGGTAATTAACAAGGCAGCTC 57.614 39.130 15.24 0.00 0.00 4.09
3810 3916 5.799827 TTTTGGTAATTAACAAGGCAGCT 57.200 34.783 15.24 0.00 0.00 4.24
3811 3917 5.178623 GGTTTTTGGTAATTAACAAGGCAGC 59.821 40.000 15.24 9.61 0.00 5.25
3812 3918 6.423604 CAGGTTTTTGGTAATTAACAAGGCAG 59.576 38.462 15.24 2.90 0.00 4.85
3813 3919 6.284459 CAGGTTTTTGGTAATTAACAAGGCA 58.716 36.000 15.24 0.00 0.00 4.75
3814 3920 5.699001 CCAGGTTTTTGGTAATTAACAAGGC 59.301 40.000 15.24 9.76 33.38 4.35
3827 3933 3.023832 ACAGTTCTCACCAGGTTTTTGG 58.976 45.455 0.00 0.00 44.09 3.28
3828 3934 4.718940 AACAGTTCTCACCAGGTTTTTG 57.281 40.909 0.00 0.00 0.00 2.44
3829 3935 5.258051 TGTAACAGTTCTCACCAGGTTTTT 58.742 37.500 0.00 0.00 0.00 1.94
3830 3936 4.850680 TGTAACAGTTCTCACCAGGTTTT 58.149 39.130 0.00 0.00 0.00 2.43
3831 3937 4.497291 TGTAACAGTTCTCACCAGGTTT 57.503 40.909 0.00 0.00 0.00 3.27
3832 3938 4.497291 TTGTAACAGTTCTCACCAGGTT 57.503 40.909 0.00 0.00 0.00 3.50
3833 3939 4.196971 GTTTGTAACAGTTCTCACCAGGT 58.803 43.478 0.00 0.00 0.00 4.00
3834 3940 4.196193 TGTTTGTAACAGTTCTCACCAGG 58.804 43.478 0.00 0.00 36.25 4.45
3835 3941 5.296780 ACATGTTTGTAACAGTTCTCACCAG 59.703 40.000 0.00 0.00 45.95 4.00
3836 3942 5.189928 ACATGTTTGTAACAGTTCTCACCA 58.810 37.500 0.00 0.00 45.95 4.17
3837 3943 5.751243 ACATGTTTGTAACAGTTCTCACC 57.249 39.130 0.00 0.00 45.95 4.02
3838 3944 6.781138 TCAACATGTTTGTAACAGTTCTCAC 58.219 36.000 8.77 0.00 45.95 3.51
3839 3945 6.993786 TCAACATGTTTGTAACAGTTCTCA 57.006 33.333 8.77 0.00 45.95 3.27
3840 3946 7.639039 TGATCAACATGTTTGTAACAGTTCTC 58.361 34.615 8.77 0.00 45.95 2.87
3841 3947 7.255242 CCTGATCAACATGTTTGTAACAGTTCT 60.255 37.037 8.77 0.00 45.95 3.01
3842 3948 6.857964 CCTGATCAACATGTTTGTAACAGTTC 59.142 38.462 8.77 1.61 45.95 3.01
3843 3949 6.735694 GCCTGATCAACATGTTTGTAACAGTT 60.736 38.462 8.77 0.00 45.95 3.16
3844 3950 5.278463 GCCTGATCAACATGTTTGTAACAGT 60.278 40.000 8.77 0.00 45.95 3.55
3845 3951 5.156355 GCCTGATCAACATGTTTGTAACAG 58.844 41.667 8.77 13.07 45.95 3.16
3846 3952 4.582240 TGCCTGATCAACATGTTTGTAACA 59.418 37.500 8.77 4.69 46.94 2.41
3847 3953 4.917415 GTGCCTGATCAACATGTTTGTAAC 59.083 41.667 8.77 0.13 34.06 2.50
3848 3954 4.582240 TGTGCCTGATCAACATGTTTGTAA 59.418 37.500 8.77 0.00 34.06 2.41
3849 3955 4.140536 TGTGCCTGATCAACATGTTTGTA 58.859 39.130 8.77 0.00 34.06 2.41
3850 3956 2.957680 TGTGCCTGATCAACATGTTTGT 59.042 40.909 8.77 0.00 37.82 2.83
3851 3957 3.646611 TGTGCCTGATCAACATGTTTG 57.353 42.857 8.77 5.07 0.00 2.93
3852 3958 4.877378 AATGTGCCTGATCAACATGTTT 57.123 36.364 8.77 0.00 0.00 2.83
3853 3959 4.281435 TGAAATGTGCCTGATCAACATGTT 59.719 37.500 11.35 4.92 0.00 2.71
3854 3960 3.827876 TGAAATGTGCCTGATCAACATGT 59.172 39.130 11.35 6.80 0.00 3.21
3855 3961 4.082408 ACTGAAATGTGCCTGATCAACATG 60.082 41.667 11.35 3.34 0.00 3.21
3856 3962 4.084287 ACTGAAATGTGCCTGATCAACAT 58.916 39.130 5.80 5.80 0.00 2.71
3857 3963 3.489355 ACTGAAATGTGCCTGATCAACA 58.511 40.909 1.34 1.34 0.00 3.33
3858 3964 4.232221 CAACTGAAATGTGCCTGATCAAC 58.768 43.478 0.00 0.00 0.00 3.18
3859 3965 3.256383 CCAACTGAAATGTGCCTGATCAA 59.744 43.478 0.00 0.00 0.00 2.57
3860 3966 2.821378 CCAACTGAAATGTGCCTGATCA 59.179 45.455 0.00 0.00 0.00 2.92
3861 3967 2.416431 GCCAACTGAAATGTGCCTGATC 60.416 50.000 0.00 0.00 0.00 2.92
3862 3968 1.547372 GCCAACTGAAATGTGCCTGAT 59.453 47.619 0.00 0.00 0.00 2.90
3863 3969 0.961019 GCCAACTGAAATGTGCCTGA 59.039 50.000 0.00 0.00 0.00 3.86
3864 3970 0.963962 AGCCAACTGAAATGTGCCTG 59.036 50.000 0.00 0.00 0.00 4.85
3865 3971 1.251251 GAGCCAACTGAAATGTGCCT 58.749 50.000 0.00 0.00 0.00 4.75
3866 3972 0.109597 CGAGCCAACTGAAATGTGCC 60.110 55.000 0.00 0.00 0.00 5.01
3867 3973 0.874390 TCGAGCCAACTGAAATGTGC 59.126 50.000 0.00 0.00 0.00 4.57
3868 3974 3.005554 AGATCGAGCCAACTGAAATGTG 58.994 45.455 0.00 0.00 0.00 3.21
3869 3975 3.265791 GAGATCGAGCCAACTGAAATGT 58.734 45.455 0.00 0.00 0.00 2.71
3870 3976 3.264947 TGAGATCGAGCCAACTGAAATG 58.735 45.455 0.00 0.00 0.00 2.32
3871 3977 3.529533 CTGAGATCGAGCCAACTGAAAT 58.470 45.455 0.00 0.00 0.00 2.17
3872 3978 2.354103 CCTGAGATCGAGCCAACTGAAA 60.354 50.000 0.00 0.00 0.00 2.69
3873 3979 1.205655 CCTGAGATCGAGCCAACTGAA 59.794 52.381 0.00 0.00 0.00 3.02
3874 3980 0.820226 CCTGAGATCGAGCCAACTGA 59.180 55.000 0.00 0.00 0.00 3.41
3875 3981 0.809241 GCCTGAGATCGAGCCAACTG 60.809 60.000 0.00 0.00 0.00 3.16
3876 3982 0.975040 AGCCTGAGATCGAGCCAACT 60.975 55.000 0.00 0.00 0.00 3.16
3877 3983 0.809241 CAGCCTGAGATCGAGCCAAC 60.809 60.000 0.00 0.00 0.00 3.77
3878 3984 0.972471 TCAGCCTGAGATCGAGCCAA 60.972 55.000 0.00 0.00 0.00 4.52
3879 3985 0.972471 TTCAGCCTGAGATCGAGCCA 60.972 55.000 0.00 0.00 0.00 4.75
3880 3986 0.249405 CTTCAGCCTGAGATCGAGCC 60.249 60.000 0.00 0.00 0.00 4.70
3881 3987 0.249405 CCTTCAGCCTGAGATCGAGC 60.249 60.000 0.00 0.00 0.00 5.03
3882 3988 1.110442 ACCTTCAGCCTGAGATCGAG 58.890 55.000 0.00 0.00 0.00 4.04
3883 3989 0.820226 CACCTTCAGCCTGAGATCGA 59.180 55.000 0.00 0.00 0.00 3.59
3884 3990 0.179089 CCACCTTCAGCCTGAGATCG 60.179 60.000 0.00 0.00 0.00 3.69
3885 3991 0.179936 CCCACCTTCAGCCTGAGATC 59.820 60.000 0.00 0.00 0.00 2.75
3886 3992 0.252881 TCCCACCTTCAGCCTGAGAT 60.253 55.000 0.00 0.00 0.00 2.75
3887 3993 0.906756 CTCCCACCTTCAGCCTGAGA 60.907 60.000 0.00 0.00 0.00 3.27
3888 3994 1.197430 ACTCCCACCTTCAGCCTGAG 61.197 60.000 0.00 0.00 0.00 3.35
3889 3995 1.152030 ACTCCCACCTTCAGCCTGA 60.152 57.895 0.00 0.00 0.00 3.86
3890 3996 1.002868 CACTCCCACCTTCAGCCTG 60.003 63.158 0.00 0.00 0.00 4.85
3891 3997 2.227036 CCACTCCCACCTTCAGCCT 61.227 63.158 0.00 0.00 0.00 4.58
3892 3998 2.352805 CCACTCCCACCTTCAGCC 59.647 66.667 0.00 0.00 0.00 4.85
3893 3999 2.352805 CCCACTCCCACCTTCAGC 59.647 66.667 0.00 0.00 0.00 4.26
3894 4000 1.427072 AACCCCACTCCCACCTTCAG 61.427 60.000 0.00 0.00 0.00 3.02
3895 4001 0.104356 TAACCCCACTCCCACCTTCA 60.104 55.000 0.00 0.00 0.00 3.02
3896 4002 1.069775 TTAACCCCACTCCCACCTTC 58.930 55.000 0.00 0.00 0.00 3.46
3897 4003 1.536644 TTTAACCCCACTCCCACCTT 58.463 50.000 0.00 0.00 0.00 3.50
3898 4004 1.768265 ATTTAACCCCACTCCCACCT 58.232 50.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.