Multiple sequence alignment - TraesCS2D01G240100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G240100 chr2D 100.000 2765 0 0 1 2765 257570474 257567710 0.000000e+00 5107.0
1 TraesCS2D01G240100 chr2D 98.872 2305 8 1 461 2765 584615414 584613128 0.000000e+00 4096.0
2 TraesCS2D01G240100 chr2D 99.348 460 3 0 1 460 257578545 257578086 0.000000e+00 833.0
3 TraesCS2D01G240100 chr2D 98.043 460 9 0 1 460 245416330 245416789 0.000000e+00 800.0
4 TraesCS2D01G240100 chr2D 98.043 460 9 0 1 460 520545439 520545898 0.000000e+00 800.0
5 TraesCS2D01G240100 chr2D 97.826 460 10 0 1 460 252283642 252284101 0.000000e+00 795.0
6 TraesCS2D01G240100 chr2D 95.359 237 5 1 461 691 257563442 257563678 3.360000e-99 372.0
7 TraesCS2D01G240100 chr2D 95.359 237 5 1 461 691 584608863 584609099 3.360000e-99 372.0
8 TraesCS2D01G240100 chr4D 98.743 2307 27 2 460 2765 469143546 469141241 0.000000e+00 4098.0
9 TraesCS2D01G240100 chr4D 97.826 460 10 0 1 460 375300653 375301112 0.000000e+00 795.0
10 TraesCS2D01G240100 chr4D 94.937 237 6 1 461 691 469136989 469137225 1.560000e-97 366.0
11 TraesCS2D01G240100 chr6A 94.694 1489 72 2 461 1942 8875862 8874374 0.000000e+00 2305.0
12 TraesCS2D01G240100 chr6A 95.194 645 27 3 2124 2765 8874345 8873702 0.000000e+00 1016.0
13 TraesCS2D01G240100 chr6A 88.710 248 19 4 452 691 8869419 8869665 7.490000e-76 294.0
14 TraesCS2D01G240100 chr6A 71.092 806 204 24 925 1719 144491876 144492663 1.320000e-38 171.0
15 TraesCS2D01G240100 chr7D 80.049 1218 203 29 461 1660 80724668 80723473 0.000000e+00 867.0
16 TraesCS2D01G240100 chr7D 98.261 460 8 0 1 460 113899632 113900091 0.000000e+00 806.0
17 TraesCS2D01G240100 chr7D 98.043 460 9 0 1 460 147074699 147074240 0.000000e+00 800.0
18 TraesCS2D01G240100 chr5D 97.826 460 10 0 1 460 107832882 107832423 0.000000e+00 795.0
19 TraesCS2D01G240100 chr1D 97.609 460 11 0 1 460 146896017 146896476 0.000000e+00 789.0
20 TraesCS2D01G240100 chr6B 77.334 1253 241 26 461 1701 314788803 314787582 0.000000e+00 701.0
21 TraesCS2D01G240100 chr5B 70.602 847 206 35 899 1727 11286606 11285785 7.980000e-31 145.0
22 TraesCS2D01G240100 chr3B 90.566 53 4 1 2540 2592 575281121 575281070 4.940000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G240100 chr2D 257567710 257570474 2764 True 5107.0 5107 100.000 1 2765 1 chr2D.!!$R1 2764
1 TraesCS2D01G240100 chr2D 584613128 584615414 2286 True 4096.0 4096 98.872 461 2765 1 chr2D.!!$R3 2304
2 TraesCS2D01G240100 chr4D 469141241 469143546 2305 True 4098.0 4098 98.743 460 2765 1 chr4D.!!$R1 2305
3 TraesCS2D01G240100 chr6A 8873702 8875862 2160 True 1660.5 2305 94.944 461 2765 2 chr6A.!!$R1 2304
4 TraesCS2D01G240100 chr7D 80723473 80724668 1195 True 867.0 867 80.049 461 1660 1 chr7D.!!$R1 1199
5 TraesCS2D01G240100 chr6B 314787582 314788803 1221 True 701.0 701 77.334 461 1701 1 chr6B.!!$R1 1240

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
413 414 0.034767 AGTCACCATACCGAGGACGA 60.035 55.0 0.0 0.0 42.66 4.20 F
440 441 0.260230 TGGGAGCGAGAGGAAGATCT 59.740 55.0 0.0 0.0 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1311 1353 0.402121 GGAGCCCTTCCAAACTGAGT 59.598 55.000 0.0 0.0 46.01 3.41 R
1906 1948 8.574251 AGATCCATACATAGATAGTCTGTCAC 57.426 38.462 0.0 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.888594 CGGATTCTAAACGCAAGGAGA 58.111 47.619 0.00 0.00 46.39 3.71
26 27 2.603560 CGGATTCTAAACGCAAGGAGAC 59.396 50.000 0.00 0.00 46.39 3.36
27 28 3.596214 GGATTCTAAACGCAAGGAGACA 58.404 45.455 0.00 0.00 46.39 3.41
28 29 3.619038 GGATTCTAAACGCAAGGAGACAG 59.381 47.826 0.00 0.00 46.39 3.51
29 30 3.746045 TTCTAAACGCAAGGAGACAGT 57.254 42.857 0.00 0.00 46.39 3.55
30 31 3.746045 TCTAAACGCAAGGAGACAGTT 57.254 42.857 0.00 0.00 46.39 3.16
31 32 3.650139 TCTAAACGCAAGGAGACAGTTC 58.350 45.455 0.00 0.00 46.39 3.01
32 33 2.325583 AAACGCAAGGAGACAGTTCA 57.674 45.000 0.00 0.00 46.39 3.18
33 34 1.583054 AACGCAAGGAGACAGTTCAC 58.417 50.000 0.00 0.00 46.39 3.18
34 35 0.597637 ACGCAAGGAGACAGTTCACG 60.598 55.000 0.00 0.00 46.39 4.35
35 36 0.318699 CGCAAGGAGACAGTTCACGA 60.319 55.000 0.00 0.00 0.00 4.35
36 37 1.865865 GCAAGGAGACAGTTCACGAA 58.134 50.000 0.00 0.00 0.00 3.85
37 38 1.795286 GCAAGGAGACAGTTCACGAAG 59.205 52.381 0.00 0.00 0.00 3.79
39 40 3.053455 CAAGGAGACAGTTCACGAAGTC 58.947 50.000 0.00 0.00 41.61 3.01
40 41 1.267261 AGGAGACAGTTCACGAAGTCG 59.733 52.381 0.00 0.00 41.61 4.18
41 42 1.666311 GGAGACAGTTCACGAAGTCGG 60.666 57.143 5.60 0.00 41.61 4.79
42 43 1.266175 GAGACAGTTCACGAAGTCGGA 59.734 52.381 5.60 0.00 41.61 4.55
43 44 1.267261 AGACAGTTCACGAAGTCGGAG 59.733 52.381 5.60 0.00 41.61 4.63
44 45 1.266175 GACAGTTCACGAAGTCGGAGA 59.734 52.381 5.60 0.03 41.61 3.71
59 60 3.005554 TCGGAGACAGAGTTTACCTACG 58.994 50.000 0.00 0.00 32.85 3.51
60 61 3.005554 CGGAGACAGAGTTTACCTACGA 58.994 50.000 0.00 0.00 33.33 3.43
61 62 3.063725 CGGAGACAGAGTTTACCTACGAG 59.936 52.174 0.00 0.00 33.33 4.18
62 63 4.009002 GGAGACAGAGTTTACCTACGAGT 58.991 47.826 0.00 0.00 0.00 4.18
63 64 5.181748 GGAGACAGAGTTTACCTACGAGTA 58.818 45.833 0.00 0.00 0.00 2.59
64 65 5.821995 GGAGACAGAGTTTACCTACGAGTAT 59.178 44.000 0.00 0.00 0.00 2.12
65 66 6.018016 GGAGACAGAGTTTACCTACGAGTATC 60.018 46.154 0.00 0.00 0.00 2.24
66 67 6.413052 AGACAGAGTTTACCTACGAGTATCA 58.587 40.000 0.00 0.00 33.17 2.15
67 68 6.315891 AGACAGAGTTTACCTACGAGTATCAC 59.684 42.308 0.00 0.00 33.17 3.06
68 69 5.356470 ACAGAGTTTACCTACGAGTATCACC 59.644 44.000 0.00 0.00 33.17 4.02
69 70 5.356190 CAGAGTTTACCTACGAGTATCACCA 59.644 44.000 0.00 0.00 33.17 4.17
70 71 5.356470 AGAGTTTACCTACGAGTATCACCAC 59.644 44.000 0.00 0.00 33.17 4.16
71 72 5.259632 AGTTTACCTACGAGTATCACCACT 58.740 41.667 0.00 0.00 33.17 4.00
72 73 5.713861 AGTTTACCTACGAGTATCACCACTT 59.286 40.000 0.00 0.00 33.17 3.16
73 74 5.824904 TTACCTACGAGTATCACCACTTC 57.175 43.478 0.00 0.00 33.17 3.01
74 75 2.681848 ACCTACGAGTATCACCACTTCG 59.318 50.000 0.00 0.00 33.17 3.79
75 76 2.941064 CCTACGAGTATCACCACTTCGA 59.059 50.000 0.00 0.00 33.17 3.71
76 77 3.002451 CCTACGAGTATCACCACTTCGAG 59.998 52.174 0.00 0.00 33.17 4.04
77 78 1.743958 ACGAGTATCACCACTTCGAGG 59.256 52.381 0.00 0.00 33.17 4.63
78 79 2.014857 CGAGTATCACCACTTCGAGGA 58.985 52.381 0.00 0.00 33.17 3.71
79 80 2.032302 CGAGTATCACCACTTCGAGGAG 59.968 54.545 0.00 0.00 33.17 3.69
80 81 3.018149 GAGTATCACCACTTCGAGGAGT 58.982 50.000 0.00 0.00 33.17 3.85
81 82 3.432378 AGTATCACCACTTCGAGGAGTT 58.568 45.455 0.00 0.00 0.00 3.01
82 83 4.597004 AGTATCACCACTTCGAGGAGTTA 58.403 43.478 0.00 0.00 0.00 2.24
83 84 5.014858 AGTATCACCACTTCGAGGAGTTAA 58.985 41.667 0.00 0.00 0.00 2.01
84 85 3.936372 TCACCACTTCGAGGAGTTAAG 57.064 47.619 0.00 0.00 0.00 1.85
85 86 2.029290 TCACCACTTCGAGGAGTTAAGC 60.029 50.000 0.00 0.00 0.00 3.09
86 87 1.067776 ACCACTTCGAGGAGTTAAGCG 60.068 52.381 0.00 0.00 0.00 4.68
87 88 0.992802 CACTTCGAGGAGTTAAGCGC 59.007 55.000 0.00 0.00 0.00 5.92
88 89 0.889306 ACTTCGAGGAGTTAAGCGCT 59.111 50.000 2.64 2.64 0.00 5.92
89 90 1.272769 ACTTCGAGGAGTTAAGCGCTT 59.727 47.619 27.97 27.97 0.00 4.68
90 91 2.288886 ACTTCGAGGAGTTAAGCGCTTT 60.289 45.455 30.13 10.84 0.00 3.51
91 92 1.710013 TCGAGGAGTTAAGCGCTTTG 58.290 50.000 30.13 5.88 0.00 2.77
92 93 0.721718 CGAGGAGTTAAGCGCTTTGG 59.278 55.000 30.13 6.41 0.00 3.28
93 94 1.671850 CGAGGAGTTAAGCGCTTTGGA 60.672 52.381 30.13 12.18 0.00 3.53
94 95 2.003301 GAGGAGTTAAGCGCTTTGGAG 58.997 52.381 30.13 0.00 0.00 3.86
95 96 1.348036 AGGAGTTAAGCGCTTTGGAGT 59.652 47.619 30.13 16.94 0.00 3.85
96 97 2.152016 GGAGTTAAGCGCTTTGGAGTT 58.848 47.619 30.13 3.96 0.00 3.01
97 98 3.007614 AGGAGTTAAGCGCTTTGGAGTTA 59.992 43.478 30.13 4.97 0.00 2.24
98 99 3.749609 GGAGTTAAGCGCTTTGGAGTTAA 59.250 43.478 30.13 11.78 0.00 2.01
99 100 4.214758 GGAGTTAAGCGCTTTGGAGTTAAA 59.785 41.667 30.13 10.96 0.00 1.52
100 101 5.358298 AGTTAAGCGCTTTGGAGTTAAAG 57.642 39.130 30.13 0.00 39.95 1.85
101 102 4.215613 AGTTAAGCGCTTTGGAGTTAAAGG 59.784 41.667 30.13 0.00 37.96 3.11
102 103 2.561478 AGCGCTTTGGAGTTAAAGGA 57.439 45.000 2.64 0.00 37.96 3.36
103 104 2.858745 AGCGCTTTGGAGTTAAAGGAA 58.141 42.857 2.64 0.00 37.96 3.36
104 105 3.219281 AGCGCTTTGGAGTTAAAGGAAA 58.781 40.909 2.64 0.00 37.96 3.13
105 106 3.253432 AGCGCTTTGGAGTTAAAGGAAAG 59.747 43.478 2.64 0.00 37.96 2.62
106 107 3.004419 GCGCTTTGGAGTTAAAGGAAAGT 59.996 43.478 0.00 0.00 37.96 2.66
107 108 4.499188 GCGCTTTGGAGTTAAAGGAAAGTT 60.499 41.667 0.00 0.00 37.96 2.66
108 109 5.278120 GCGCTTTGGAGTTAAAGGAAAGTTA 60.278 40.000 0.00 0.00 37.96 2.24
109 110 6.371389 CGCTTTGGAGTTAAAGGAAAGTTAG 58.629 40.000 0.00 0.00 37.96 2.34
110 111 6.150318 GCTTTGGAGTTAAAGGAAAGTTAGC 58.850 40.000 0.00 0.00 37.96 3.09
111 112 5.934935 TTGGAGTTAAAGGAAAGTTAGCG 57.065 39.130 0.00 0.00 0.00 4.26
112 113 3.749609 TGGAGTTAAAGGAAAGTTAGCGC 59.250 43.478 0.00 0.00 0.00 5.92
113 114 3.126514 GGAGTTAAAGGAAAGTTAGCGCC 59.873 47.826 2.29 0.00 0.00 6.53
114 115 3.746940 AGTTAAAGGAAAGTTAGCGCCA 58.253 40.909 2.29 0.00 0.00 5.69
115 116 3.501062 AGTTAAAGGAAAGTTAGCGCCAC 59.499 43.478 2.29 0.25 0.00 5.01
116 117 1.975660 AAAGGAAAGTTAGCGCCACA 58.024 45.000 2.29 0.00 0.00 4.17
117 118 2.200373 AAGGAAAGTTAGCGCCACAT 57.800 45.000 2.29 0.00 0.00 3.21
118 119 2.200373 AGGAAAGTTAGCGCCACATT 57.800 45.000 2.29 0.00 0.00 2.71
119 120 2.514803 AGGAAAGTTAGCGCCACATTT 58.485 42.857 2.29 0.03 0.00 2.32
120 121 2.890945 AGGAAAGTTAGCGCCACATTTT 59.109 40.909 2.29 0.00 0.00 1.82
121 122 2.986479 GGAAAGTTAGCGCCACATTTTG 59.014 45.455 2.29 0.00 0.00 2.44
122 123 3.552068 GGAAAGTTAGCGCCACATTTTGT 60.552 43.478 2.29 0.00 0.00 2.83
123 124 4.320641 GGAAAGTTAGCGCCACATTTTGTA 60.321 41.667 2.29 0.00 0.00 2.41
124 125 4.419522 AAGTTAGCGCCACATTTTGTAG 57.580 40.909 2.29 0.00 0.00 2.74
125 126 2.747446 AGTTAGCGCCACATTTTGTAGG 59.253 45.455 2.29 0.00 0.00 3.18
126 127 2.745281 GTTAGCGCCACATTTTGTAGGA 59.255 45.455 2.29 0.00 0.00 2.94
127 128 1.165270 AGCGCCACATTTTGTAGGAC 58.835 50.000 2.29 0.00 0.00 3.85
128 129 0.170339 GCGCCACATTTTGTAGGACC 59.830 55.000 0.00 0.00 0.00 4.46
129 130 1.529226 CGCCACATTTTGTAGGACCA 58.471 50.000 0.00 0.00 0.00 4.02
130 131 2.091541 CGCCACATTTTGTAGGACCAT 58.908 47.619 0.00 0.00 0.00 3.55
131 132 3.275143 CGCCACATTTTGTAGGACCATA 58.725 45.455 0.00 0.00 0.00 2.74
132 133 3.064820 CGCCACATTTTGTAGGACCATAC 59.935 47.826 0.00 0.00 0.00 2.39
133 134 4.013728 GCCACATTTTGTAGGACCATACA 58.986 43.478 0.00 0.00 33.88 2.29
134 135 4.461081 GCCACATTTTGTAGGACCATACAA 59.539 41.667 10.64 10.64 42.42 2.41
143 144 7.841282 TTGTAGGACCATACAAAATTTTGGA 57.159 32.000 29.37 24.34 41.47 3.53
144 145 7.461182 TGTAGGACCATACAAAATTTTGGAG 57.539 36.000 29.37 19.41 42.34 3.86
145 146 5.405935 AGGACCATACAAAATTTTGGAGC 57.594 39.130 29.37 14.89 42.34 4.70
146 147 4.222810 AGGACCATACAAAATTTTGGAGCC 59.777 41.667 29.37 21.25 42.34 4.70
147 148 4.222810 GGACCATACAAAATTTTGGAGCCT 59.777 41.667 29.37 14.22 42.34 4.58
148 149 5.420739 GGACCATACAAAATTTTGGAGCCTA 59.579 40.000 29.37 15.71 42.34 3.93
149 150 6.098266 GGACCATACAAAATTTTGGAGCCTAT 59.902 38.462 29.37 17.01 42.34 2.57
150 151 6.877236 ACCATACAAAATTTTGGAGCCTATG 58.123 36.000 29.37 24.43 42.34 2.23
151 152 6.127083 ACCATACAAAATTTTGGAGCCTATGG 60.127 38.462 31.73 31.73 42.26 2.74
152 153 4.824479 ACAAAATTTTGGAGCCTATGGG 57.176 40.909 29.37 5.58 42.34 4.00
153 154 4.424842 ACAAAATTTTGGAGCCTATGGGA 58.575 39.130 29.37 0.00 42.34 4.37
154 155 4.467438 ACAAAATTTTGGAGCCTATGGGAG 59.533 41.667 29.37 5.01 42.34 4.30
155 156 4.608170 AAATTTTGGAGCCTATGGGAGA 57.392 40.909 0.00 0.00 33.58 3.71
156 157 4.608170 AATTTTGGAGCCTATGGGAGAA 57.392 40.909 0.00 0.00 33.58 2.87
157 158 3.652057 TTTTGGAGCCTATGGGAGAAG 57.348 47.619 0.00 0.00 33.58 2.85
158 159 2.270434 TTGGAGCCTATGGGAGAAGT 57.730 50.000 0.00 0.00 33.58 3.01
159 160 2.270434 TGGAGCCTATGGGAGAAGTT 57.730 50.000 0.00 0.00 33.58 2.66
160 161 1.839994 TGGAGCCTATGGGAGAAGTTG 59.160 52.381 0.00 0.00 33.58 3.16
161 162 1.475930 GGAGCCTATGGGAGAAGTTGC 60.476 57.143 0.00 0.00 33.58 4.17
162 163 1.488393 GAGCCTATGGGAGAAGTTGCT 59.512 52.381 0.00 0.00 33.58 3.91
163 164 1.918957 AGCCTATGGGAGAAGTTGCTT 59.081 47.619 0.00 0.00 33.58 3.91
164 165 3.115390 AGCCTATGGGAGAAGTTGCTTA 58.885 45.455 0.00 0.00 33.58 3.09
165 166 3.118223 AGCCTATGGGAGAAGTTGCTTAC 60.118 47.826 0.00 0.00 33.58 2.34
166 167 3.370527 GCCTATGGGAGAAGTTGCTTACA 60.371 47.826 0.00 0.00 33.58 2.41
167 168 4.843728 CCTATGGGAGAAGTTGCTTACAA 58.156 43.478 0.00 0.00 33.58 2.41
168 169 5.253330 CCTATGGGAGAAGTTGCTTACAAA 58.747 41.667 0.00 0.00 33.96 2.83
169 170 5.123979 CCTATGGGAGAAGTTGCTTACAAAC 59.876 44.000 0.00 0.00 33.96 2.93
170 171 4.164843 TGGGAGAAGTTGCTTACAAACT 57.835 40.909 0.00 0.00 37.58 2.66
171 172 3.882888 TGGGAGAAGTTGCTTACAAACTG 59.117 43.478 0.00 0.00 37.58 3.16
172 173 3.253432 GGGAGAAGTTGCTTACAAACTGG 59.747 47.826 0.00 0.00 37.58 4.00
173 174 4.134563 GGAGAAGTTGCTTACAAACTGGA 58.865 43.478 0.00 0.00 37.58 3.86
174 175 4.578928 GGAGAAGTTGCTTACAAACTGGAA 59.421 41.667 0.00 0.00 37.58 3.53
175 176 5.241728 GGAGAAGTTGCTTACAAACTGGAAT 59.758 40.000 0.00 0.00 37.58 3.01
176 177 6.239036 GGAGAAGTTGCTTACAAACTGGAATT 60.239 38.462 0.00 0.00 37.58 2.17
177 178 6.507023 AGAAGTTGCTTACAAACTGGAATTG 58.493 36.000 0.00 0.00 37.58 2.32
178 179 4.620982 AGTTGCTTACAAACTGGAATTGC 58.379 39.130 0.00 0.00 37.58 3.56
179 180 3.658757 TGCTTACAAACTGGAATTGCC 57.341 42.857 0.00 0.00 37.10 4.52
180 181 2.030363 TGCTTACAAACTGGAATTGCCG 60.030 45.455 0.00 0.00 40.66 5.69
181 182 2.227865 GCTTACAAACTGGAATTGCCGA 59.772 45.455 0.00 0.00 40.66 5.54
182 183 3.305064 GCTTACAAACTGGAATTGCCGAA 60.305 43.478 0.00 0.00 40.66 4.30
183 184 4.794655 GCTTACAAACTGGAATTGCCGAAA 60.795 41.667 0.00 0.00 40.66 3.46
184 185 3.369546 ACAAACTGGAATTGCCGAAAG 57.630 42.857 0.00 0.00 40.66 2.62
185 186 2.693074 ACAAACTGGAATTGCCGAAAGT 59.307 40.909 0.00 0.00 40.66 2.66
186 187 3.886505 ACAAACTGGAATTGCCGAAAGTA 59.113 39.130 0.00 0.00 40.66 2.24
187 188 4.522789 ACAAACTGGAATTGCCGAAAGTAT 59.477 37.500 0.00 0.00 40.66 2.12
188 189 5.010617 ACAAACTGGAATTGCCGAAAGTATT 59.989 36.000 0.00 0.00 40.66 1.89
189 190 4.701956 ACTGGAATTGCCGAAAGTATTG 57.298 40.909 0.00 0.00 40.66 1.90
190 191 4.079253 ACTGGAATTGCCGAAAGTATTGT 58.921 39.130 0.00 0.00 40.66 2.71
191 192 4.156008 ACTGGAATTGCCGAAAGTATTGTC 59.844 41.667 0.00 0.00 40.66 3.18
192 193 4.075682 TGGAATTGCCGAAAGTATTGTCA 58.924 39.130 0.00 0.00 40.66 3.58
193 194 4.155826 TGGAATTGCCGAAAGTATTGTCAG 59.844 41.667 0.00 0.00 40.66 3.51
194 195 4.438744 GGAATTGCCGAAAGTATTGTCAGG 60.439 45.833 0.00 0.00 0.00 3.86
195 196 3.410631 TTGCCGAAAGTATTGTCAGGA 57.589 42.857 0.00 0.00 0.00 3.86
196 197 3.627395 TGCCGAAAGTATTGTCAGGAT 57.373 42.857 0.00 0.00 0.00 3.24
197 198 3.950397 TGCCGAAAGTATTGTCAGGATT 58.050 40.909 0.00 0.00 0.00 3.01
198 199 4.331968 TGCCGAAAGTATTGTCAGGATTT 58.668 39.130 0.00 0.00 0.00 2.17
199 200 4.394920 TGCCGAAAGTATTGTCAGGATTTC 59.605 41.667 0.00 0.00 0.00 2.17
200 201 4.394920 GCCGAAAGTATTGTCAGGATTTCA 59.605 41.667 0.00 0.00 0.00 2.69
201 202 5.066505 GCCGAAAGTATTGTCAGGATTTCAT 59.933 40.000 0.00 0.00 0.00 2.57
202 203 6.489675 CCGAAAGTATTGTCAGGATTTCATG 58.510 40.000 0.00 0.00 0.00 3.07
203 204 6.316140 CCGAAAGTATTGTCAGGATTTCATGA 59.684 38.462 0.00 0.00 33.95 3.07
204 205 7.012704 CCGAAAGTATTGTCAGGATTTCATGAT 59.987 37.037 0.00 0.00 38.98 2.45
205 206 7.854422 CGAAAGTATTGTCAGGATTTCATGATG 59.146 37.037 0.00 0.00 38.98 3.07
206 207 8.585471 AAAGTATTGTCAGGATTTCATGATGT 57.415 30.769 0.00 0.00 38.98 3.06
207 208 9.685276 AAAGTATTGTCAGGATTTCATGATGTA 57.315 29.630 0.00 0.00 38.98 2.29
208 209 9.857656 AAGTATTGTCAGGATTTCATGATGTAT 57.142 29.630 0.00 0.00 38.98 2.29
209 210 9.857656 AGTATTGTCAGGATTTCATGATGTATT 57.142 29.630 0.00 0.00 38.98 1.89
212 213 8.578448 TTGTCAGGATTTCATGATGTATTTCA 57.422 30.769 0.00 0.00 38.98 2.69
213 214 7.988737 TGTCAGGATTTCATGATGTATTTCAC 58.011 34.615 0.00 0.00 38.98 3.18
214 215 7.128331 GTCAGGATTTCATGATGTATTTCACG 58.872 38.462 0.00 0.00 38.98 4.35
215 216 6.823182 TCAGGATTTCATGATGTATTTCACGT 59.177 34.615 0.00 0.00 31.11 4.49
216 217 7.336679 TCAGGATTTCATGATGTATTTCACGTT 59.663 33.333 0.00 0.00 31.11 3.99
217 218 7.970061 CAGGATTTCATGATGTATTTCACGTTT 59.030 33.333 0.00 0.00 0.00 3.60
218 219 8.184192 AGGATTTCATGATGTATTTCACGTTTC 58.816 33.333 0.00 0.00 0.00 2.78
219 220 7.432252 GGATTTCATGATGTATTTCACGTTTCC 59.568 37.037 0.00 0.00 0.00 3.13
220 221 5.811399 TCATGATGTATTTCACGTTTCCC 57.189 39.130 0.00 0.00 0.00 3.97
221 222 5.249420 TCATGATGTATTTCACGTTTCCCA 58.751 37.500 0.00 0.00 0.00 4.37
222 223 5.353956 TCATGATGTATTTCACGTTTCCCAG 59.646 40.000 0.00 0.00 0.00 4.45
223 224 4.647611 TGATGTATTTCACGTTTCCCAGT 58.352 39.130 0.00 0.00 0.00 4.00
224 225 5.067273 TGATGTATTTCACGTTTCCCAGTT 58.933 37.500 0.00 0.00 0.00 3.16
225 226 4.822036 TGTATTTCACGTTTCCCAGTTG 57.178 40.909 0.00 0.00 0.00 3.16
226 227 4.452825 TGTATTTCACGTTTCCCAGTTGA 58.547 39.130 0.00 0.00 0.00 3.18
227 228 4.882427 TGTATTTCACGTTTCCCAGTTGAA 59.118 37.500 0.00 0.00 0.00 2.69
228 229 4.568152 ATTTCACGTTTCCCAGTTGAAG 57.432 40.909 0.00 0.00 0.00 3.02
229 230 2.992124 TCACGTTTCCCAGTTGAAGA 57.008 45.000 0.00 0.00 0.00 2.87
230 231 3.269538 TCACGTTTCCCAGTTGAAGAA 57.730 42.857 0.00 0.00 0.00 2.52
231 232 3.202906 TCACGTTTCCCAGTTGAAGAAG 58.797 45.455 0.00 0.00 0.00 2.85
232 233 2.943033 CACGTTTCCCAGTTGAAGAAGT 59.057 45.455 0.00 0.00 0.00 3.01
233 234 2.943033 ACGTTTCCCAGTTGAAGAAGTG 59.057 45.455 0.00 0.00 32.91 3.16
234 235 2.287009 CGTTTCCCAGTTGAAGAAGTGC 60.287 50.000 0.00 0.00 31.90 4.40
235 236 1.981256 TTCCCAGTTGAAGAAGTGCC 58.019 50.000 0.00 0.00 31.90 5.01
236 237 0.843309 TCCCAGTTGAAGAAGTGCCA 59.157 50.000 0.00 0.00 31.90 4.92
237 238 0.954452 CCCAGTTGAAGAAGTGCCAC 59.046 55.000 0.00 0.00 31.90 5.01
238 239 0.588252 CCAGTTGAAGAAGTGCCACG 59.412 55.000 0.00 0.00 31.90 4.94
239 240 0.040958 CAGTTGAAGAAGTGCCACGC 60.041 55.000 0.00 0.00 0.00 5.34
240 241 0.463654 AGTTGAAGAAGTGCCACGCA 60.464 50.000 0.00 0.00 35.60 5.24
241 242 0.040958 GTTGAAGAAGTGCCACGCAG 60.041 55.000 0.00 0.00 40.08 5.18
242 243 1.165907 TTGAAGAAGTGCCACGCAGG 61.166 55.000 0.00 0.00 40.08 4.85
243 244 2.281761 AAGAAGTGCCACGCAGGG 60.282 61.111 0.00 0.00 40.08 4.45
244 245 2.731691 GAAGAAGTGCCACGCAGGGA 62.732 60.000 0.00 0.00 40.08 4.20
245 246 2.045926 GAAGTGCCACGCAGGGAT 60.046 61.111 0.00 0.00 41.14 3.85
246 247 2.360350 AAGTGCCACGCAGGGATG 60.360 61.111 0.00 0.00 41.14 3.51
247 248 3.925630 AAGTGCCACGCAGGGATGG 62.926 63.158 0.00 0.00 41.14 3.51
251 252 4.100084 CCACGCAGGGATGGCTGA 62.100 66.667 0.00 0.00 0.00 4.26
252 253 2.513204 CACGCAGGGATGGCTGAG 60.513 66.667 0.00 0.00 0.00 3.35
253 254 2.685017 ACGCAGGGATGGCTGAGA 60.685 61.111 0.00 0.00 0.00 3.27
254 255 2.068821 ACGCAGGGATGGCTGAGAT 61.069 57.895 0.00 0.00 0.00 2.75
255 256 0.760567 ACGCAGGGATGGCTGAGATA 60.761 55.000 0.00 0.00 0.00 1.98
256 257 0.320247 CGCAGGGATGGCTGAGATAC 60.320 60.000 0.00 0.00 0.00 2.24
257 258 0.036022 GCAGGGATGGCTGAGATACC 59.964 60.000 0.00 0.00 0.00 2.73
258 259 1.427809 CAGGGATGGCTGAGATACCA 58.572 55.000 0.00 0.00 41.06 3.25
259 260 1.071385 CAGGGATGGCTGAGATACCAC 59.929 57.143 0.00 0.00 39.19 4.16
260 261 1.061812 AGGGATGGCTGAGATACCACT 60.062 52.381 0.00 0.00 39.19 4.00
261 262 1.071385 GGGATGGCTGAGATACCACTG 59.929 57.143 0.00 0.00 39.19 3.66
262 263 2.042464 GGATGGCTGAGATACCACTGA 58.958 52.381 0.00 0.00 39.19 3.41
263 264 2.036992 GGATGGCTGAGATACCACTGAG 59.963 54.545 0.00 0.00 39.19 3.35
264 265 2.532250 TGGCTGAGATACCACTGAGA 57.468 50.000 0.00 0.00 0.00 3.27
265 266 2.382882 TGGCTGAGATACCACTGAGAG 58.617 52.381 0.00 0.00 0.00 3.20
266 267 2.024941 TGGCTGAGATACCACTGAGAGA 60.025 50.000 0.00 0.00 0.00 3.10
267 268 3.230134 GGCTGAGATACCACTGAGAGAT 58.770 50.000 0.00 0.00 0.00 2.75
268 269 4.141158 TGGCTGAGATACCACTGAGAGATA 60.141 45.833 0.00 0.00 0.00 1.98
269 270 4.217550 GGCTGAGATACCACTGAGAGATAC 59.782 50.000 0.00 0.00 0.00 2.24
270 271 4.083537 GCTGAGATACCACTGAGAGATACG 60.084 50.000 0.00 0.00 0.00 3.06
271 272 4.390264 TGAGATACCACTGAGAGATACGG 58.610 47.826 0.00 0.00 0.00 4.02
272 273 4.141459 TGAGATACCACTGAGAGATACGGT 60.141 45.833 0.00 0.00 0.00 4.83
273 274 4.138290 AGATACCACTGAGAGATACGGTG 58.862 47.826 0.00 0.00 42.26 4.94
274 275 0.818296 ACCACTGAGAGATACGGTGC 59.182 55.000 0.00 0.00 41.56 5.01
275 276 0.103208 CCACTGAGAGATACGGTGCC 59.897 60.000 0.00 0.00 41.56 5.01
276 277 0.817654 CACTGAGAGATACGGTGCCA 59.182 55.000 0.00 0.00 37.72 4.92
277 278 1.410517 CACTGAGAGATACGGTGCCAT 59.589 52.381 0.00 0.00 37.72 4.40
278 279 2.111384 ACTGAGAGATACGGTGCCATT 58.889 47.619 0.00 0.00 0.00 3.16
279 280 2.159043 ACTGAGAGATACGGTGCCATTG 60.159 50.000 0.00 0.00 0.00 2.82
280 281 1.138859 TGAGAGATACGGTGCCATTGG 59.861 52.381 0.00 0.00 0.00 3.16
281 282 1.412710 GAGAGATACGGTGCCATTGGA 59.587 52.381 6.95 0.00 0.00 3.53
282 283 1.837439 AGAGATACGGTGCCATTGGAA 59.163 47.619 6.95 0.00 0.00 3.53
283 284 2.158900 AGAGATACGGTGCCATTGGAAG 60.159 50.000 6.95 0.00 0.00 3.46
284 285 0.663153 GATACGGTGCCATTGGAAGC 59.337 55.000 6.95 4.54 0.00 3.86
287 288 3.924507 GGTGCCATTGGAAGCGAT 58.075 55.556 6.95 0.00 0.00 4.58
288 289 2.192605 GGTGCCATTGGAAGCGATT 58.807 52.632 6.95 0.00 0.00 3.34
289 290 0.101219 GGTGCCATTGGAAGCGATTC 59.899 55.000 6.95 4.45 0.00 2.52
290 291 0.810648 GTGCCATTGGAAGCGATTCA 59.189 50.000 16.24 0.00 0.00 2.57
291 292 1.097232 TGCCATTGGAAGCGATTCAG 58.903 50.000 16.24 1.78 0.00 3.02
292 293 0.248784 GCCATTGGAAGCGATTCAGC 60.249 55.000 16.24 5.86 37.41 4.26
302 303 2.515926 GCGATTCAGCTGGATAGTGA 57.484 50.000 15.13 0.00 0.00 3.41
303 304 2.131183 GCGATTCAGCTGGATAGTGAC 58.869 52.381 15.13 0.00 0.00 3.67
304 305 2.223923 GCGATTCAGCTGGATAGTGACT 60.224 50.000 15.13 0.00 0.00 3.41
305 306 3.739519 GCGATTCAGCTGGATAGTGACTT 60.740 47.826 15.13 0.00 0.00 3.01
306 307 3.801050 CGATTCAGCTGGATAGTGACTTG 59.199 47.826 15.13 0.00 0.00 3.16
307 308 4.440663 CGATTCAGCTGGATAGTGACTTGA 60.441 45.833 15.13 0.00 0.00 3.02
308 309 3.876274 TCAGCTGGATAGTGACTTGAC 57.124 47.619 15.13 0.00 0.00 3.18
309 310 2.497675 TCAGCTGGATAGTGACTTGACC 59.502 50.000 15.13 0.00 0.00 4.02
310 311 2.499289 CAGCTGGATAGTGACTTGACCT 59.501 50.000 5.57 0.00 0.00 3.85
311 312 3.701542 CAGCTGGATAGTGACTTGACCTA 59.298 47.826 5.57 0.00 0.00 3.08
312 313 4.343526 CAGCTGGATAGTGACTTGACCTAT 59.656 45.833 5.57 0.00 0.00 2.57
313 314 4.343526 AGCTGGATAGTGACTTGACCTATG 59.656 45.833 0.00 0.00 0.00 2.23
314 315 4.342378 GCTGGATAGTGACTTGACCTATGA 59.658 45.833 0.00 0.00 0.00 2.15
315 316 5.508825 GCTGGATAGTGACTTGACCTATGAG 60.509 48.000 0.00 0.00 0.00 2.90
316 317 4.895889 TGGATAGTGACTTGACCTATGAGG 59.104 45.833 0.00 0.00 42.49 3.86
317 318 5.141182 GGATAGTGACTTGACCTATGAGGA 58.859 45.833 0.00 0.00 37.67 3.71
318 319 5.242838 GGATAGTGACTTGACCTATGAGGAG 59.757 48.000 0.00 0.00 37.67 3.69
319 320 4.323569 AGTGACTTGACCTATGAGGAGA 57.676 45.455 0.00 0.00 37.67 3.71
320 321 4.678256 AGTGACTTGACCTATGAGGAGAA 58.322 43.478 0.00 0.00 37.67 2.87
321 322 5.087323 AGTGACTTGACCTATGAGGAGAAA 58.913 41.667 0.00 0.00 37.67 2.52
322 323 5.046950 AGTGACTTGACCTATGAGGAGAAAC 60.047 44.000 0.00 0.00 37.67 2.78
323 324 4.223032 TGACTTGACCTATGAGGAGAAACC 59.777 45.833 0.00 0.00 37.67 3.27
324 325 4.168101 ACTTGACCTATGAGGAGAAACCA 58.832 43.478 0.00 0.00 37.67 3.67
325 326 4.223923 ACTTGACCTATGAGGAGAAACCAG 59.776 45.833 0.00 0.00 37.67 4.00
326 327 3.791320 TGACCTATGAGGAGAAACCAGT 58.209 45.455 0.00 0.00 37.67 4.00
327 328 4.168101 TGACCTATGAGGAGAAACCAGTT 58.832 43.478 0.00 0.00 37.67 3.16
328 329 5.338632 TGACCTATGAGGAGAAACCAGTTA 58.661 41.667 0.00 0.00 37.67 2.24
329 330 5.783360 TGACCTATGAGGAGAAACCAGTTAA 59.217 40.000 0.00 0.00 37.67 2.01
330 331 6.070767 TGACCTATGAGGAGAAACCAGTTAAG 60.071 42.308 0.00 0.00 37.67 1.85
331 332 6.023603 ACCTATGAGGAGAAACCAGTTAAGA 58.976 40.000 0.00 0.00 37.67 2.10
332 333 6.674419 ACCTATGAGGAGAAACCAGTTAAGAT 59.326 38.462 0.00 0.00 37.67 2.40
333 334 7.182930 ACCTATGAGGAGAAACCAGTTAAGATT 59.817 37.037 0.00 0.00 37.67 2.40
334 335 7.713073 CCTATGAGGAGAAACCAGTTAAGATTC 59.287 40.741 0.00 0.00 37.67 2.52
335 336 6.688073 TGAGGAGAAACCAGTTAAGATTCT 57.312 37.500 0.00 0.00 42.04 2.40
336 337 7.079451 TGAGGAGAAACCAGTTAAGATTCTT 57.921 36.000 4.03 4.03 42.04 2.52
337 338 6.936900 TGAGGAGAAACCAGTTAAGATTCTTG 59.063 38.462 9.22 0.00 42.04 3.02
338 339 7.079451 AGGAGAAACCAGTTAAGATTCTTGA 57.921 36.000 9.22 0.00 42.04 3.02
339 340 7.164803 AGGAGAAACCAGTTAAGATTCTTGAG 58.835 38.462 9.22 0.00 42.04 3.02
340 341 6.937465 GGAGAAACCAGTTAAGATTCTTGAGT 59.063 38.462 9.22 0.94 38.79 3.41
341 342 8.095169 GGAGAAACCAGTTAAGATTCTTGAGTA 58.905 37.037 9.22 0.00 38.79 2.59
342 343 9.660180 GAGAAACCAGTTAAGATTCTTGAGTAT 57.340 33.333 9.22 0.00 30.89 2.12
343 344 9.442047 AGAAACCAGTTAAGATTCTTGAGTATG 57.558 33.333 9.22 2.12 0.00 2.39
344 345 7.617041 AACCAGTTAAGATTCTTGAGTATGC 57.383 36.000 9.22 0.00 0.00 3.14
345 346 6.116126 ACCAGTTAAGATTCTTGAGTATGCC 58.884 40.000 9.22 0.00 0.00 4.40
346 347 6.115446 CCAGTTAAGATTCTTGAGTATGCCA 58.885 40.000 9.22 0.00 0.00 4.92
347 348 6.259608 CCAGTTAAGATTCTTGAGTATGCCAG 59.740 42.308 9.22 0.00 0.00 4.85
348 349 5.819901 AGTTAAGATTCTTGAGTATGCCAGC 59.180 40.000 9.22 0.00 0.00 4.85
349 350 3.205784 AGATTCTTGAGTATGCCAGCC 57.794 47.619 0.00 0.00 0.00 4.85
350 351 1.869767 GATTCTTGAGTATGCCAGCCG 59.130 52.381 0.00 0.00 0.00 5.52
351 352 0.901827 TTCTTGAGTATGCCAGCCGA 59.098 50.000 0.00 0.00 0.00 5.54
352 353 0.461548 TCTTGAGTATGCCAGCCGAG 59.538 55.000 0.00 0.00 0.00 4.63
353 354 0.176680 CTTGAGTATGCCAGCCGAGT 59.823 55.000 0.00 0.00 0.00 4.18
354 355 0.175760 TTGAGTATGCCAGCCGAGTC 59.824 55.000 0.00 0.00 0.00 3.36
355 356 0.970427 TGAGTATGCCAGCCGAGTCA 60.970 55.000 0.00 0.00 0.00 3.41
356 357 0.528684 GAGTATGCCAGCCGAGTCAC 60.529 60.000 0.00 0.00 0.00 3.67
357 358 1.521681 GTATGCCAGCCGAGTCACC 60.522 63.158 0.00 0.00 0.00 4.02
358 359 2.731571 TATGCCAGCCGAGTCACCC 61.732 63.158 0.00 0.00 0.00 4.61
379 380 4.766404 CGCAGGAAGGTTATCAAGTTTT 57.234 40.909 0.00 0.00 0.00 2.43
380 381 4.475944 CGCAGGAAGGTTATCAAGTTTTG 58.524 43.478 0.00 0.00 0.00 2.44
381 382 4.237724 GCAGGAAGGTTATCAAGTTTTGC 58.762 43.478 0.00 0.00 0.00 3.68
382 383 4.261994 GCAGGAAGGTTATCAAGTTTTGCA 60.262 41.667 0.00 0.00 0.00 4.08
383 384 5.738783 GCAGGAAGGTTATCAAGTTTTGCAA 60.739 40.000 0.00 0.00 0.00 4.08
384 385 6.279882 CAGGAAGGTTATCAAGTTTTGCAAA 58.720 36.000 8.05 8.05 0.00 3.68
385 386 6.421801 CAGGAAGGTTATCAAGTTTTGCAAAG 59.578 38.462 12.41 0.66 0.00 2.77
386 387 6.098266 AGGAAGGTTATCAAGTTTTGCAAAGT 59.902 34.615 12.41 0.94 0.00 2.66
387 388 6.761242 GGAAGGTTATCAAGTTTTGCAAAGTT 59.239 34.615 12.41 7.45 0.00 2.66
388 389 7.042725 GGAAGGTTATCAAGTTTTGCAAAGTTC 60.043 37.037 12.41 7.38 0.00 3.01
389 390 6.872920 AGGTTATCAAGTTTTGCAAAGTTCA 58.127 32.000 12.41 0.00 0.00 3.18
390 391 6.980397 AGGTTATCAAGTTTTGCAAAGTTCAG 59.020 34.615 12.41 3.49 0.00 3.02
391 392 6.756542 GGTTATCAAGTTTTGCAAAGTTCAGT 59.243 34.615 12.41 0.00 0.00 3.41
392 393 7.254084 GGTTATCAAGTTTTGCAAAGTTCAGTG 60.254 37.037 12.41 6.52 0.00 3.66
393 394 4.493547 TCAAGTTTTGCAAAGTTCAGTGG 58.506 39.130 12.41 0.00 0.00 4.00
394 395 4.219507 TCAAGTTTTGCAAAGTTCAGTGGA 59.780 37.500 12.41 0.79 0.00 4.02
395 396 4.376340 AGTTTTGCAAAGTTCAGTGGAG 57.624 40.909 12.41 0.00 0.00 3.86
396 397 3.763897 AGTTTTGCAAAGTTCAGTGGAGT 59.236 39.130 12.41 0.00 0.00 3.85
397 398 4.105486 GTTTTGCAAAGTTCAGTGGAGTC 58.895 43.478 12.41 0.00 0.00 3.36
398 399 2.708216 TGCAAAGTTCAGTGGAGTCA 57.292 45.000 0.00 0.00 0.00 3.41
399 400 2.288666 TGCAAAGTTCAGTGGAGTCAC 58.711 47.619 0.00 0.00 43.93 3.67
400 401 1.604278 GCAAAGTTCAGTGGAGTCACC 59.396 52.381 0.00 0.00 44.64 4.02
409 410 2.896278 TGGAGTCACCATACCGAGG 58.104 57.895 0.00 0.00 44.64 4.63
410 411 0.333652 TGGAGTCACCATACCGAGGA 59.666 55.000 0.00 0.00 44.64 3.71
411 412 0.745468 GGAGTCACCATACCGAGGAC 59.255 60.000 0.00 0.00 38.79 3.85
412 413 0.381089 GAGTCACCATACCGAGGACG 59.619 60.000 0.00 0.00 39.43 4.79
413 414 0.034767 AGTCACCATACCGAGGACGA 60.035 55.000 0.00 0.00 42.66 4.20
414 415 0.813184 GTCACCATACCGAGGACGAA 59.187 55.000 0.00 0.00 42.66 3.85
415 416 1.100510 TCACCATACCGAGGACGAAG 58.899 55.000 0.00 0.00 42.66 3.79
416 417 0.527817 CACCATACCGAGGACGAAGC 60.528 60.000 0.00 0.00 42.66 3.86
417 418 1.067582 CCATACCGAGGACGAAGCC 59.932 63.158 0.00 0.00 42.66 4.35
418 419 1.672854 CCATACCGAGGACGAAGCCA 61.673 60.000 0.00 0.00 42.66 4.75
419 420 0.527817 CATACCGAGGACGAAGCCAC 60.528 60.000 0.00 0.00 42.66 5.01
420 421 1.673808 ATACCGAGGACGAAGCCACC 61.674 60.000 0.00 0.00 42.66 4.61
421 422 2.776370 TACCGAGGACGAAGCCACCT 62.776 60.000 0.00 0.00 42.66 4.00
422 423 2.125912 CGAGGACGAAGCCACCTG 60.126 66.667 0.00 0.00 42.66 4.00
423 424 2.266055 GAGGACGAAGCCACCTGG 59.734 66.667 0.00 0.00 33.89 4.45
424 425 3.316573 GAGGACGAAGCCACCTGGG 62.317 68.421 0.00 0.00 40.85 4.45
425 426 3.319198 GGACGAAGCCACCTGGGA 61.319 66.667 0.00 0.00 40.01 4.37
426 427 2.266055 GACGAAGCCACCTGGGAG 59.734 66.667 0.00 0.00 40.01 4.30
427 428 3.959991 GACGAAGCCACCTGGGAGC 62.960 68.421 0.00 0.00 40.01 4.70
429 430 3.706373 GAAGCCACCTGGGAGCGA 61.706 66.667 0.00 0.00 40.01 4.93
430 431 3.672295 GAAGCCACCTGGGAGCGAG 62.672 68.421 0.00 0.00 40.01 5.03
431 432 4.704103 AGCCACCTGGGAGCGAGA 62.704 66.667 0.00 0.00 40.01 4.04
432 433 4.154347 GCCACCTGGGAGCGAGAG 62.154 72.222 0.00 0.00 40.01 3.20
433 434 3.465403 CCACCTGGGAGCGAGAGG 61.465 72.222 0.00 0.00 40.01 3.69
434 435 2.363018 CACCTGGGAGCGAGAGGA 60.363 66.667 0.00 0.00 0.00 3.71
435 436 1.984570 CACCTGGGAGCGAGAGGAA 60.985 63.158 0.00 0.00 0.00 3.36
436 437 1.684049 ACCTGGGAGCGAGAGGAAG 60.684 63.158 0.00 0.00 0.00 3.46
437 438 1.380515 CCTGGGAGCGAGAGGAAGA 60.381 63.158 0.00 0.00 0.00 2.87
438 439 0.758685 CCTGGGAGCGAGAGGAAGAT 60.759 60.000 0.00 0.00 0.00 2.40
439 440 0.673437 CTGGGAGCGAGAGGAAGATC 59.327 60.000 0.00 0.00 0.00 2.75
440 441 0.260230 TGGGAGCGAGAGGAAGATCT 59.740 55.000 0.00 0.00 0.00 2.75
441 442 1.495148 TGGGAGCGAGAGGAAGATCTA 59.505 52.381 0.00 0.00 0.00 1.98
442 443 1.883926 GGGAGCGAGAGGAAGATCTAC 59.116 57.143 0.00 0.00 0.00 2.59
443 444 1.533731 GGAGCGAGAGGAAGATCTACG 59.466 57.143 0.00 0.00 0.00 3.51
444 445 1.533731 GAGCGAGAGGAAGATCTACGG 59.466 57.143 0.00 0.00 0.00 4.02
445 446 1.141254 AGCGAGAGGAAGATCTACGGA 59.859 52.381 0.00 0.00 0.00 4.69
446 447 1.948145 GCGAGAGGAAGATCTACGGAA 59.052 52.381 0.00 0.00 0.00 4.30
447 448 2.031508 GCGAGAGGAAGATCTACGGAAG 60.032 54.545 0.00 0.00 0.00 3.46
448 449 3.468770 CGAGAGGAAGATCTACGGAAGA 58.531 50.000 0.00 0.00 39.02 2.87
449 450 3.878103 CGAGAGGAAGATCTACGGAAGAA 59.122 47.826 0.00 0.00 37.89 2.52
450 451 4.260866 CGAGAGGAAGATCTACGGAAGAAC 60.261 50.000 0.00 0.00 37.89 3.01
451 452 4.601084 AGAGGAAGATCTACGGAAGAACA 58.399 43.478 0.00 0.00 37.89 3.18
452 453 5.017490 AGAGGAAGATCTACGGAAGAACAA 58.983 41.667 0.00 0.00 37.89 2.83
453 454 5.074584 AGGAAGATCTACGGAAGAACAAC 57.925 43.478 0.00 0.00 37.89 3.32
454 455 4.773149 AGGAAGATCTACGGAAGAACAACT 59.227 41.667 0.00 0.00 37.89 3.16
455 456 5.103687 GGAAGATCTACGGAAGAACAACTC 58.896 45.833 0.00 0.00 37.89 3.01
456 457 5.105675 GGAAGATCTACGGAAGAACAACTCT 60.106 44.000 0.00 0.00 37.89 3.24
457 458 5.570234 AGATCTACGGAAGAACAACTCTC 57.430 43.478 0.00 0.00 37.89 3.20
458 459 5.010933 AGATCTACGGAAGAACAACTCTCA 58.989 41.667 0.00 0.00 37.89 3.27
834 858 2.304761 GACCTCCACCACCATTTCTGTA 59.695 50.000 0.00 0.00 0.00 2.74
1173 1197 1.434188 CCCCACATGACCTATGGCTA 58.566 55.000 0.00 0.00 41.25 3.93
1274 1298 0.749649 CAGCGCTGGGTAAGAGAGAT 59.250 55.000 29.88 0.00 0.00 2.75
1311 1353 2.626266 TGCTCTGGAGTACAAGACGAAA 59.374 45.455 0.00 0.00 0.00 3.46
1906 1948 8.341903 TGAATTTGGTATGTAATATTCAGTGCG 58.658 33.333 0.00 0.00 30.85 5.34
2530 2575 4.754322 ACACAAAATGAAACCACCACTTC 58.246 39.130 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.603560 GTCTCCTTGCGTTTAGAATCCG 59.396 50.000 0.00 0.00 0.00 4.18
6 7 3.596214 TGTCTCCTTGCGTTTAGAATCC 58.404 45.455 0.00 0.00 0.00 3.01
7 8 4.246458 ACTGTCTCCTTGCGTTTAGAATC 58.754 43.478 0.00 0.00 0.00 2.52
8 9 4.273148 ACTGTCTCCTTGCGTTTAGAAT 57.727 40.909 0.00 0.00 0.00 2.40
9 10 3.746045 ACTGTCTCCTTGCGTTTAGAA 57.254 42.857 0.00 0.00 0.00 2.10
10 11 3.069016 TGAACTGTCTCCTTGCGTTTAGA 59.931 43.478 0.00 0.00 0.00 2.10
11 12 3.184581 GTGAACTGTCTCCTTGCGTTTAG 59.815 47.826 0.00 0.00 0.00 1.85
12 13 3.128349 GTGAACTGTCTCCTTGCGTTTA 58.872 45.455 0.00 0.00 0.00 2.01
13 14 1.940613 GTGAACTGTCTCCTTGCGTTT 59.059 47.619 0.00 0.00 0.00 3.60
14 15 1.583054 GTGAACTGTCTCCTTGCGTT 58.417 50.000 0.00 0.00 0.00 4.84
15 16 0.597637 CGTGAACTGTCTCCTTGCGT 60.598 55.000 0.00 0.00 0.00 5.24
16 17 0.318699 TCGTGAACTGTCTCCTTGCG 60.319 55.000 0.00 0.00 0.00 4.85
17 18 1.795286 CTTCGTGAACTGTCTCCTTGC 59.205 52.381 0.00 0.00 0.00 4.01
18 19 3.053455 GACTTCGTGAACTGTCTCCTTG 58.947 50.000 0.00 0.00 0.00 3.61
19 20 2.287668 CGACTTCGTGAACTGTCTCCTT 60.288 50.000 0.00 0.00 34.11 3.36
20 21 1.267261 CGACTTCGTGAACTGTCTCCT 59.733 52.381 0.00 0.00 34.11 3.69
21 22 1.666311 CCGACTTCGTGAACTGTCTCC 60.666 57.143 0.00 0.00 37.74 3.71
22 23 1.266175 TCCGACTTCGTGAACTGTCTC 59.734 52.381 0.00 0.00 37.74 3.36
23 24 1.267261 CTCCGACTTCGTGAACTGTCT 59.733 52.381 0.00 0.00 37.74 3.41
24 25 1.266175 TCTCCGACTTCGTGAACTGTC 59.734 52.381 0.00 0.00 37.74 3.51
25 26 1.001597 GTCTCCGACTTCGTGAACTGT 60.002 52.381 0.00 0.00 37.74 3.55
26 27 1.001706 TGTCTCCGACTTCGTGAACTG 60.002 52.381 0.00 0.00 37.74 3.16
27 28 1.267261 CTGTCTCCGACTTCGTGAACT 59.733 52.381 0.00 0.00 37.74 3.01
28 29 1.266175 TCTGTCTCCGACTTCGTGAAC 59.734 52.381 0.00 0.00 37.74 3.18
29 30 1.535896 CTCTGTCTCCGACTTCGTGAA 59.464 52.381 0.00 0.00 37.74 3.18
30 31 1.157585 CTCTGTCTCCGACTTCGTGA 58.842 55.000 0.00 0.00 37.74 4.35
31 32 0.875728 ACTCTGTCTCCGACTTCGTG 59.124 55.000 0.00 0.00 37.74 4.35
32 33 1.606903 AACTCTGTCTCCGACTTCGT 58.393 50.000 0.00 0.00 37.74 3.85
33 34 2.708386 AAACTCTGTCTCCGACTTCG 57.292 50.000 0.00 0.00 39.44 3.79
34 35 3.506844 AGGTAAACTCTGTCTCCGACTTC 59.493 47.826 0.00 0.00 33.15 3.01
35 36 3.498334 AGGTAAACTCTGTCTCCGACTT 58.502 45.455 0.00 0.00 33.15 3.01
36 37 3.157750 AGGTAAACTCTGTCTCCGACT 57.842 47.619 0.00 0.00 33.15 4.18
37 38 3.181512 CGTAGGTAAACTCTGTCTCCGAC 60.182 52.174 0.00 0.00 0.00 4.79
38 39 3.005554 CGTAGGTAAACTCTGTCTCCGA 58.994 50.000 0.00 0.00 0.00 4.55
39 40 3.005554 TCGTAGGTAAACTCTGTCTCCG 58.994 50.000 0.00 0.00 0.00 4.63
40 41 4.009002 ACTCGTAGGTAAACTCTGTCTCC 58.991 47.826 0.00 0.00 0.00 3.71
41 42 6.538021 TGATACTCGTAGGTAAACTCTGTCTC 59.462 42.308 0.00 0.00 0.00 3.36
42 43 6.315891 GTGATACTCGTAGGTAAACTCTGTCT 59.684 42.308 0.00 0.00 0.00 3.41
43 44 6.458070 GGTGATACTCGTAGGTAAACTCTGTC 60.458 46.154 0.00 0.00 0.00 3.51
44 45 5.356470 GGTGATACTCGTAGGTAAACTCTGT 59.644 44.000 0.00 0.00 0.00 3.41
45 46 5.356190 TGGTGATACTCGTAGGTAAACTCTG 59.644 44.000 0.00 0.00 0.00 3.35
46 47 5.356470 GTGGTGATACTCGTAGGTAAACTCT 59.644 44.000 0.00 0.00 0.00 3.24
47 48 5.356470 AGTGGTGATACTCGTAGGTAAACTC 59.644 44.000 0.00 0.00 0.00 3.01
48 49 5.259632 AGTGGTGATACTCGTAGGTAAACT 58.740 41.667 0.00 0.00 0.00 2.66
49 50 5.573337 AGTGGTGATACTCGTAGGTAAAC 57.427 43.478 0.00 0.00 0.00 2.01
50 51 5.163723 CGAAGTGGTGATACTCGTAGGTAAA 60.164 44.000 0.00 0.00 0.00 2.01
51 52 4.333649 CGAAGTGGTGATACTCGTAGGTAA 59.666 45.833 0.00 0.00 0.00 2.85
52 53 3.873361 CGAAGTGGTGATACTCGTAGGTA 59.127 47.826 0.00 0.00 0.00 3.08
53 54 2.681848 CGAAGTGGTGATACTCGTAGGT 59.318 50.000 0.00 0.00 0.00 3.08
54 55 2.941064 TCGAAGTGGTGATACTCGTAGG 59.059 50.000 0.00 0.00 0.00 3.18
55 56 3.002451 CCTCGAAGTGGTGATACTCGTAG 59.998 52.174 0.00 0.00 36.26 3.51
56 57 2.941064 CCTCGAAGTGGTGATACTCGTA 59.059 50.000 0.00 0.00 36.26 3.43
57 58 1.743958 CCTCGAAGTGGTGATACTCGT 59.256 52.381 0.00 0.00 36.26 4.18
58 59 2.014857 TCCTCGAAGTGGTGATACTCG 58.985 52.381 0.00 0.00 42.59 4.18
59 60 3.018149 ACTCCTCGAAGTGGTGATACTC 58.982 50.000 0.00 0.00 42.59 2.59
60 61 3.088789 ACTCCTCGAAGTGGTGATACT 57.911 47.619 0.00 0.00 42.59 2.12
61 62 3.870633 AACTCCTCGAAGTGGTGATAC 57.129 47.619 0.00 0.00 42.59 2.24
62 63 4.142227 GCTTAACTCCTCGAAGTGGTGATA 60.142 45.833 0.00 0.00 42.59 2.15
63 64 3.368531 GCTTAACTCCTCGAAGTGGTGAT 60.369 47.826 0.00 0.00 42.59 3.06
64 65 2.029290 GCTTAACTCCTCGAAGTGGTGA 60.029 50.000 0.00 0.00 42.59 4.02
65 66 2.338500 GCTTAACTCCTCGAAGTGGTG 58.662 52.381 0.00 0.00 42.59 4.17
66 67 1.067776 CGCTTAACTCCTCGAAGTGGT 60.068 52.381 0.00 0.00 42.59 4.16
67 68 1.630148 CGCTTAACTCCTCGAAGTGG 58.370 55.000 0.00 0.00 43.52 4.00
68 69 0.992802 GCGCTTAACTCCTCGAAGTG 59.007 55.000 0.00 0.00 34.52 3.16
69 70 0.889306 AGCGCTTAACTCCTCGAAGT 59.111 50.000 2.64 0.00 0.00 3.01
70 71 1.997669 AAGCGCTTAACTCCTCGAAG 58.002 50.000 23.72 0.00 0.00 3.79
71 72 2.066262 CAAAGCGCTTAACTCCTCGAA 58.934 47.619 25.33 0.00 0.00 3.71
72 73 1.671850 CCAAAGCGCTTAACTCCTCGA 60.672 52.381 25.33 0.00 0.00 4.04
73 74 0.721718 CCAAAGCGCTTAACTCCTCG 59.278 55.000 25.33 4.60 0.00 4.63
74 75 2.003301 CTCCAAAGCGCTTAACTCCTC 58.997 52.381 25.33 0.00 0.00 3.71
75 76 1.348036 ACTCCAAAGCGCTTAACTCCT 59.652 47.619 25.33 2.95 0.00 3.69
76 77 1.809684 ACTCCAAAGCGCTTAACTCC 58.190 50.000 25.33 0.00 0.00 3.85
77 78 5.352643 TTTAACTCCAAAGCGCTTAACTC 57.647 39.130 25.33 0.00 0.00 3.01
78 79 4.215613 CCTTTAACTCCAAAGCGCTTAACT 59.784 41.667 25.33 4.74 34.74 2.24
79 80 4.214758 TCCTTTAACTCCAAAGCGCTTAAC 59.785 41.667 25.33 0.00 34.74 2.01
80 81 4.391155 TCCTTTAACTCCAAAGCGCTTAA 58.609 39.130 25.33 9.27 34.74 1.85
81 82 4.010667 TCCTTTAACTCCAAAGCGCTTA 57.989 40.909 25.33 7.05 34.74 3.09
82 83 2.858745 TCCTTTAACTCCAAAGCGCTT 58.141 42.857 18.98 18.98 34.74 4.68
83 84 2.561478 TCCTTTAACTCCAAAGCGCT 57.439 45.000 2.64 2.64 34.74 5.92
84 85 3.004419 ACTTTCCTTTAACTCCAAAGCGC 59.996 43.478 0.00 0.00 34.74 5.92
85 86 4.830826 ACTTTCCTTTAACTCCAAAGCG 57.169 40.909 0.00 0.00 34.74 4.68
86 87 6.150318 GCTAACTTTCCTTTAACTCCAAAGC 58.850 40.000 0.00 0.00 34.74 3.51
87 88 6.371389 CGCTAACTTTCCTTTAACTCCAAAG 58.629 40.000 0.00 0.00 35.65 2.77
88 89 5.278120 GCGCTAACTTTCCTTTAACTCCAAA 60.278 40.000 0.00 0.00 0.00 3.28
89 90 4.214758 GCGCTAACTTTCCTTTAACTCCAA 59.785 41.667 0.00 0.00 0.00 3.53
90 91 3.749609 GCGCTAACTTTCCTTTAACTCCA 59.250 43.478 0.00 0.00 0.00 3.86
91 92 3.126514 GGCGCTAACTTTCCTTTAACTCC 59.873 47.826 7.64 0.00 0.00 3.85
92 93 3.749609 TGGCGCTAACTTTCCTTTAACTC 59.250 43.478 7.64 0.00 0.00 3.01
93 94 3.501062 GTGGCGCTAACTTTCCTTTAACT 59.499 43.478 7.64 0.00 0.00 2.24
94 95 3.251487 TGTGGCGCTAACTTTCCTTTAAC 59.749 43.478 7.64 0.00 0.00 2.01
95 96 3.478509 TGTGGCGCTAACTTTCCTTTAA 58.521 40.909 7.64 0.00 0.00 1.52
96 97 3.128852 TGTGGCGCTAACTTTCCTTTA 57.871 42.857 7.64 0.00 0.00 1.85
97 98 1.975660 TGTGGCGCTAACTTTCCTTT 58.024 45.000 7.64 0.00 0.00 3.11
98 99 2.200373 ATGTGGCGCTAACTTTCCTT 57.800 45.000 7.64 0.00 0.00 3.36
99 100 2.200373 AATGTGGCGCTAACTTTCCT 57.800 45.000 7.64 0.00 0.00 3.36
100 101 2.986479 CAAAATGTGGCGCTAACTTTCC 59.014 45.455 7.64 0.00 0.00 3.13
101 102 3.638484 ACAAAATGTGGCGCTAACTTTC 58.362 40.909 7.64 0.00 0.00 2.62
102 103 3.726291 ACAAAATGTGGCGCTAACTTT 57.274 38.095 7.64 8.14 0.00 2.66
103 104 3.190535 CCTACAAAATGTGGCGCTAACTT 59.809 43.478 7.64 1.63 0.00 2.66
104 105 2.747446 CCTACAAAATGTGGCGCTAACT 59.253 45.455 7.64 0.00 0.00 2.24
105 106 2.745281 TCCTACAAAATGTGGCGCTAAC 59.255 45.455 7.64 7.13 0.00 2.34
106 107 2.745281 GTCCTACAAAATGTGGCGCTAA 59.255 45.455 7.64 0.00 0.00 3.09
107 108 2.352388 GTCCTACAAAATGTGGCGCTA 58.648 47.619 7.64 0.00 0.00 4.26
108 109 1.165270 GTCCTACAAAATGTGGCGCT 58.835 50.000 7.64 0.00 0.00 5.92
109 110 0.170339 GGTCCTACAAAATGTGGCGC 59.830 55.000 0.00 0.00 0.00 6.53
110 111 1.529226 TGGTCCTACAAAATGTGGCG 58.471 50.000 0.00 0.00 0.00 5.69
111 112 4.013728 TGTATGGTCCTACAAAATGTGGC 58.986 43.478 0.00 0.00 0.00 5.01
112 113 6.582677 TTTGTATGGTCCTACAAAATGTGG 57.417 37.500 17.35 0.00 44.45 4.17
118 119 8.251383 TCCAAAATTTTGTATGGTCCTACAAA 57.749 30.769 25.25 16.41 45.26 2.83
119 120 7.524698 GCTCCAAAATTTTGTATGGTCCTACAA 60.525 37.037 25.25 8.85 39.27 2.41
120 121 6.071616 GCTCCAAAATTTTGTATGGTCCTACA 60.072 38.462 25.25 0.00 36.45 2.74
121 122 6.330278 GCTCCAAAATTTTGTATGGTCCTAC 58.670 40.000 25.25 3.74 36.45 3.18
122 123 5.420739 GGCTCCAAAATTTTGTATGGTCCTA 59.579 40.000 25.25 0.00 36.45 2.94
123 124 4.222810 GGCTCCAAAATTTTGTATGGTCCT 59.777 41.667 25.25 0.00 36.45 3.85
124 125 4.222810 AGGCTCCAAAATTTTGTATGGTCC 59.777 41.667 25.25 16.72 36.45 4.46
125 126 5.405935 AGGCTCCAAAATTTTGTATGGTC 57.594 39.130 25.25 14.91 36.45 4.02
126 127 6.127083 CCATAGGCTCCAAAATTTTGTATGGT 60.127 38.462 28.74 16.79 37.43 3.55
127 128 6.282930 CCATAGGCTCCAAAATTTTGTATGG 58.717 40.000 26.67 26.67 36.66 2.74
128 129 6.098124 TCCCATAGGCTCCAAAATTTTGTATG 59.902 38.462 25.25 22.67 36.45 2.39
129 130 6.201591 TCCCATAGGCTCCAAAATTTTGTAT 58.798 36.000 25.25 14.95 36.45 2.29
130 131 5.584913 TCCCATAGGCTCCAAAATTTTGTA 58.415 37.500 25.25 12.38 36.45 2.41
131 132 4.424842 TCCCATAGGCTCCAAAATTTTGT 58.575 39.130 25.25 11.96 36.45 2.83
132 133 4.711355 TCTCCCATAGGCTCCAAAATTTTG 59.289 41.667 21.65 21.65 37.90 2.44
133 134 4.946646 TCTCCCATAGGCTCCAAAATTTT 58.053 39.130 0.00 0.00 0.00 1.82
134 135 4.608170 TCTCCCATAGGCTCCAAAATTT 57.392 40.909 0.00 0.00 0.00 1.82
135 136 4.017130 ACTTCTCCCATAGGCTCCAAAATT 60.017 41.667 0.00 0.00 0.00 1.82
136 137 3.529319 ACTTCTCCCATAGGCTCCAAAAT 59.471 43.478 0.00 0.00 0.00 1.82
137 138 2.919602 ACTTCTCCCATAGGCTCCAAAA 59.080 45.455 0.00 0.00 0.00 2.44
138 139 2.562296 ACTTCTCCCATAGGCTCCAAA 58.438 47.619 0.00 0.00 0.00 3.28
139 140 2.239654 CAACTTCTCCCATAGGCTCCAA 59.760 50.000 0.00 0.00 0.00 3.53
140 141 1.839994 CAACTTCTCCCATAGGCTCCA 59.160 52.381 0.00 0.00 0.00 3.86
141 142 1.475930 GCAACTTCTCCCATAGGCTCC 60.476 57.143 0.00 0.00 0.00 4.70
142 143 1.488393 AGCAACTTCTCCCATAGGCTC 59.512 52.381 0.00 0.00 0.00 4.70
143 144 1.589414 AGCAACTTCTCCCATAGGCT 58.411 50.000 0.00 0.00 0.00 4.58
144 145 2.426842 AAGCAACTTCTCCCATAGGC 57.573 50.000 0.00 0.00 0.00 3.93
145 146 4.487714 TGTAAGCAACTTCTCCCATAGG 57.512 45.455 0.00 0.00 0.00 2.57
146 147 5.940470 AGTTTGTAAGCAACTTCTCCCATAG 59.060 40.000 0.00 0.00 33.82 2.23
147 148 5.705441 CAGTTTGTAAGCAACTTCTCCCATA 59.295 40.000 0.00 0.00 33.82 2.74
148 149 4.520492 CAGTTTGTAAGCAACTTCTCCCAT 59.480 41.667 0.00 0.00 33.82 4.00
149 150 3.882888 CAGTTTGTAAGCAACTTCTCCCA 59.117 43.478 0.00 0.00 33.82 4.37
150 151 3.253432 CCAGTTTGTAAGCAACTTCTCCC 59.747 47.826 0.00 0.00 33.82 4.30
151 152 4.134563 TCCAGTTTGTAAGCAACTTCTCC 58.865 43.478 0.00 0.00 33.82 3.71
152 153 5.751243 TTCCAGTTTGTAAGCAACTTCTC 57.249 39.130 0.00 0.00 33.82 2.87
153 154 6.507023 CAATTCCAGTTTGTAAGCAACTTCT 58.493 36.000 0.00 0.00 33.82 2.85
154 155 5.175673 GCAATTCCAGTTTGTAAGCAACTTC 59.824 40.000 0.00 0.00 33.82 3.01
155 156 5.049828 GCAATTCCAGTTTGTAAGCAACTT 58.950 37.500 0.00 0.00 33.82 2.66
156 157 4.501400 GGCAATTCCAGTTTGTAAGCAACT 60.501 41.667 0.00 0.00 32.34 3.16
157 158 3.740832 GGCAATTCCAGTTTGTAAGCAAC 59.259 43.478 0.00 0.00 32.34 4.17
158 159 3.551863 CGGCAATTCCAGTTTGTAAGCAA 60.552 43.478 0.00 0.00 34.01 3.91
159 160 2.030363 CGGCAATTCCAGTTTGTAAGCA 60.030 45.455 0.00 0.00 34.01 3.91
160 161 2.227865 TCGGCAATTCCAGTTTGTAAGC 59.772 45.455 0.00 0.00 34.01 3.09
161 162 4.497473 TTCGGCAATTCCAGTTTGTAAG 57.503 40.909 0.00 0.00 34.01 2.34
162 163 4.339814 ACTTTCGGCAATTCCAGTTTGTAA 59.660 37.500 0.00 0.00 34.01 2.41
163 164 3.886505 ACTTTCGGCAATTCCAGTTTGTA 59.113 39.130 0.00 0.00 34.01 2.41
164 165 2.693074 ACTTTCGGCAATTCCAGTTTGT 59.307 40.909 0.00 0.00 34.01 2.83
165 166 3.369546 ACTTTCGGCAATTCCAGTTTG 57.630 42.857 0.00 0.00 34.01 2.93
166 167 5.010617 ACAATACTTTCGGCAATTCCAGTTT 59.989 36.000 0.00 0.00 34.01 2.66
167 168 4.522789 ACAATACTTTCGGCAATTCCAGTT 59.477 37.500 0.00 0.00 34.01 3.16
168 169 4.079253 ACAATACTTTCGGCAATTCCAGT 58.921 39.130 0.00 0.00 34.01 4.00
169 170 4.155826 TGACAATACTTTCGGCAATTCCAG 59.844 41.667 0.00 0.00 34.01 3.86
170 171 4.075682 TGACAATACTTTCGGCAATTCCA 58.924 39.130 0.00 0.00 34.01 3.53
171 172 4.438744 CCTGACAATACTTTCGGCAATTCC 60.439 45.833 0.00 0.00 0.00 3.01
172 173 4.394920 TCCTGACAATACTTTCGGCAATTC 59.605 41.667 0.00 0.00 0.00 2.17
173 174 4.331968 TCCTGACAATACTTTCGGCAATT 58.668 39.130 0.00 0.00 0.00 2.32
174 175 3.950397 TCCTGACAATACTTTCGGCAAT 58.050 40.909 0.00 0.00 0.00 3.56
175 176 3.410631 TCCTGACAATACTTTCGGCAA 57.589 42.857 0.00 0.00 0.00 4.52
176 177 3.627395 ATCCTGACAATACTTTCGGCA 57.373 42.857 0.00 0.00 0.00 5.69
177 178 4.394920 TGAAATCCTGACAATACTTTCGGC 59.605 41.667 0.00 0.00 0.00 5.54
178 179 6.316140 TCATGAAATCCTGACAATACTTTCGG 59.684 38.462 0.00 0.00 0.00 4.30
179 180 7.307493 TCATGAAATCCTGACAATACTTTCG 57.693 36.000 0.00 0.00 0.00 3.46
180 181 8.680903 ACATCATGAAATCCTGACAATACTTTC 58.319 33.333 0.00 0.00 0.00 2.62
181 182 8.585471 ACATCATGAAATCCTGACAATACTTT 57.415 30.769 0.00 0.00 0.00 2.66
182 183 9.857656 ATACATCATGAAATCCTGACAATACTT 57.142 29.630 0.00 0.00 0.00 2.24
183 184 9.857656 AATACATCATGAAATCCTGACAATACT 57.142 29.630 0.00 0.00 0.00 2.12
186 187 9.192642 TGAAATACATCATGAAATCCTGACAAT 57.807 29.630 0.00 0.00 0.00 2.71
187 188 8.461222 GTGAAATACATCATGAAATCCTGACAA 58.539 33.333 0.00 0.00 0.00 3.18
188 189 7.201635 CGTGAAATACATCATGAAATCCTGACA 60.202 37.037 0.00 0.00 38.37 3.58
189 190 7.128331 CGTGAAATACATCATGAAATCCTGAC 58.872 38.462 0.00 0.00 38.37 3.51
190 191 6.823182 ACGTGAAATACATCATGAAATCCTGA 59.177 34.615 0.00 0.00 38.37 3.86
191 192 7.019774 ACGTGAAATACATCATGAAATCCTG 57.980 36.000 0.00 0.00 38.37 3.86
192 193 7.630242 AACGTGAAATACATCATGAAATCCT 57.370 32.000 0.00 0.00 38.37 3.24
193 194 7.432252 GGAAACGTGAAATACATCATGAAATCC 59.568 37.037 0.00 4.58 38.37 3.01
194 195 7.432252 GGGAAACGTGAAATACATCATGAAATC 59.568 37.037 0.00 0.00 38.37 2.17
195 196 7.093988 TGGGAAACGTGAAATACATCATGAAAT 60.094 33.333 0.00 0.00 38.37 2.17
196 197 6.207614 TGGGAAACGTGAAATACATCATGAAA 59.792 34.615 0.00 0.00 38.37 2.69
197 198 5.707764 TGGGAAACGTGAAATACATCATGAA 59.292 36.000 0.00 0.00 38.37 2.57
198 199 5.249420 TGGGAAACGTGAAATACATCATGA 58.751 37.500 0.00 0.00 38.37 3.07
199 200 5.123820 ACTGGGAAACGTGAAATACATCATG 59.876 40.000 0.00 0.00 41.21 3.07
200 201 5.253330 ACTGGGAAACGTGAAATACATCAT 58.747 37.500 0.00 0.00 0.00 2.45
201 202 4.647611 ACTGGGAAACGTGAAATACATCA 58.352 39.130 0.00 0.00 0.00 3.07
202 203 5.180492 TCAACTGGGAAACGTGAAATACATC 59.820 40.000 0.00 0.00 0.00 3.06
203 204 5.067273 TCAACTGGGAAACGTGAAATACAT 58.933 37.500 0.00 0.00 0.00 2.29
204 205 4.452825 TCAACTGGGAAACGTGAAATACA 58.547 39.130 0.00 0.00 0.00 2.29
205 206 5.237779 TCTTCAACTGGGAAACGTGAAATAC 59.762 40.000 0.00 0.00 0.00 1.89
206 207 5.369833 TCTTCAACTGGGAAACGTGAAATA 58.630 37.500 0.00 0.00 0.00 1.40
207 208 4.204012 TCTTCAACTGGGAAACGTGAAAT 58.796 39.130 0.00 0.00 0.00 2.17
208 209 3.611970 TCTTCAACTGGGAAACGTGAAA 58.388 40.909 0.00 0.00 0.00 2.69
209 210 3.269538 TCTTCAACTGGGAAACGTGAA 57.730 42.857 0.00 0.00 0.00 3.18
210 211 2.992124 TCTTCAACTGGGAAACGTGA 57.008 45.000 0.00 0.00 0.00 4.35
211 212 2.943033 ACTTCTTCAACTGGGAAACGTG 59.057 45.455 0.00 0.00 0.00 4.49
212 213 2.943033 CACTTCTTCAACTGGGAAACGT 59.057 45.455 0.00 0.00 0.00 3.99
213 214 2.287009 GCACTTCTTCAACTGGGAAACG 60.287 50.000 0.00 0.00 0.00 3.60
214 215 2.034685 GGCACTTCTTCAACTGGGAAAC 59.965 50.000 0.00 0.00 0.00 2.78
215 216 2.306847 GGCACTTCTTCAACTGGGAAA 58.693 47.619 0.00 0.00 0.00 3.13
216 217 1.214175 TGGCACTTCTTCAACTGGGAA 59.786 47.619 0.00 0.00 0.00 3.97
217 218 0.843309 TGGCACTTCTTCAACTGGGA 59.157 50.000 0.00 0.00 0.00 4.37
218 219 0.954452 GTGGCACTTCTTCAACTGGG 59.046 55.000 11.13 0.00 0.00 4.45
219 220 0.588252 CGTGGCACTTCTTCAACTGG 59.412 55.000 16.72 0.00 0.00 4.00
220 221 0.040958 GCGTGGCACTTCTTCAACTG 60.041 55.000 16.72 0.00 0.00 3.16
221 222 0.463654 TGCGTGGCACTTCTTCAACT 60.464 50.000 16.72 0.00 31.71 3.16
222 223 0.040958 CTGCGTGGCACTTCTTCAAC 60.041 55.000 16.72 0.00 33.79 3.18
223 224 1.165907 CCTGCGTGGCACTTCTTCAA 61.166 55.000 16.72 0.00 33.79 2.69
224 225 1.597854 CCTGCGTGGCACTTCTTCA 60.598 57.895 16.72 4.87 33.79 3.02
225 226 2.328099 CCCTGCGTGGCACTTCTTC 61.328 63.158 16.72 0.30 33.79 2.87
226 227 2.129555 ATCCCTGCGTGGCACTTCTT 62.130 55.000 16.72 0.00 33.79 2.52
227 228 2.596851 ATCCCTGCGTGGCACTTCT 61.597 57.895 16.72 0.00 33.79 2.85
228 229 2.045926 ATCCCTGCGTGGCACTTC 60.046 61.111 16.72 7.89 33.79 3.01
229 230 2.360350 CATCCCTGCGTGGCACTT 60.360 61.111 16.72 0.00 33.79 3.16
230 231 4.415150 CCATCCCTGCGTGGCACT 62.415 66.667 16.72 0.00 33.79 4.40
234 235 4.100084 TCAGCCATCCCTGCGTGG 62.100 66.667 0.00 0.00 38.55 4.94
235 236 2.321263 ATCTCAGCCATCCCTGCGTG 62.321 60.000 0.00 0.00 32.87 5.34
236 237 0.760567 TATCTCAGCCATCCCTGCGT 60.761 55.000 0.00 0.00 32.87 5.24
237 238 0.320247 GTATCTCAGCCATCCCTGCG 60.320 60.000 0.00 0.00 32.87 5.18
238 239 0.036022 GGTATCTCAGCCATCCCTGC 59.964 60.000 0.00 0.00 32.87 4.85
239 240 1.071385 GTGGTATCTCAGCCATCCCTG 59.929 57.143 0.00 0.00 37.09 4.45
240 241 1.061812 AGTGGTATCTCAGCCATCCCT 60.062 52.381 0.00 0.00 37.09 4.20
241 242 1.071385 CAGTGGTATCTCAGCCATCCC 59.929 57.143 0.00 0.00 37.09 3.85
242 243 2.036992 CTCAGTGGTATCTCAGCCATCC 59.963 54.545 0.00 0.00 37.09 3.51
243 244 2.961741 TCTCAGTGGTATCTCAGCCATC 59.038 50.000 0.00 0.00 37.09 3.51
244 245 2.964464 CTCTCAGTGGTATCTCAGCCAT 59.036 50.000 0.00 0.00 37.09 4.40
245 246 2.024941 TCTCTCAGTGGTATCTCAGCCA 60.025 50.000 0.00 0.00 0.00 4.75
246 247 2.660572 TCTCTCAGTGGTATCTCAGCC 58.339 52.381 0.00 0.00 0.00 4.85
247 248 4.083537 CGTATCTCTCAGTGGTATCTCAGC 60.084 50.000 0.00 0.00 0.00 4.26
248 249 4.454161 CCGTATCTCTCAGTGGTATCTCAG 59.546 50.000 0.00 0.00 0.00 3.35
249 250 4.141459 ACCGTATCTCTCAGTGGTATCTCA 60.141 45.833 0.00 0.00 0.00 3.27
250 251 4.214545 CACCGTATCTCTCAGTGGTATCTC 59.785 50.000 0.00 0.00 0.00 2.75
251 252 4.138290 CACCGTATCTCTCAGTGGTATCT 58.862 47.826 0.00 0.00 0.00 1.98
252 253 3.304794 GCACCGTATCTCTCAGTGGTATC 60.305 52.174 0.00 0.00 0.00 2.24
253 254 2.623889 GCACCGTATCTCTCAGTGGTAT 59.376 50.000 0.00 0.00 0.00 2.73
254 255 2.022195 GCACCGTATCTCTCAGTGGTA 58.978 52.381 0.00 0.00 0.00 3.25
255 256 0.818296 GCACCGTATCTCTCAGTGGT 59.182 55.000 0.00 0.00 0.00 4.16
256 257 0.103208 GGCACCGTATCTCTCAGTGG 59.897 60.000 0.00 0.00 0.00 4.00
257 258 0.817654 TGGCACCGTATCTCTCAGTG 59.182 55.000 0.00 0.00 0.00 3.66
258 259 1.781786 ATGGCACCGTATCTCTCAGT 58.218 50.000 0.00 0.00 0.00 3.41
259 260 2.477825 CAATGGCACCGTATCTCTCAG 58.522 52.381 0.00 0.00 0.00 3.35
260 261 1.138859 CCAATGGCACCGTATCTCTCA 59.861 52.381 0.00 0.00 0.00 3.27
261 262 1.412710 TCCAATGGCACCGTATCTCTC 59.587 52.381 0.00 0.00 0.00 3.20
262 263 1.496060 TCCAATGGCACCGTATCTCT 58.504 50.000 0.00 0.00 0.00 3.10
263 264 2.213499 CTTCCAATGGCACCGTATCTC 58.787 52.381 0.00 0.00 0.00 2.75
264 265 1.747206 GCTTCCAATGGCACCGTATCT 60.747 52.381 0.00 0.00 0.00 1.98
265 266 0.663153 GCTTCCAATGGCACCGTATC 59.337 55.000 0.00 0.00 0.00 2.24
266 267 1.095228 CGCTTCCAATGGCACCGTAT 61.095 55.000 0.00 0.00 0.00 3.06
267 268 1.743623 CGCTTCCAATGGCACCGTA 60.744 57.895 0.00 0.00 0.00 4.02
268 269 2.819984 ATCGCTTCCAATGGCACCGT 62.820 55.000 0.00 0.00 0.00 4.83
269 270 1.656818 AATCGCTTCCAATGGCACCG 61.657 55.000 0.00 0.00 0.00 4.94
270 271 0.101219 GAATCGCTTCCAATGGCACC 59.899 55.000 0.00 0.00 0.00 5.01
271 272 0.810648 TGAATCGCTTCCAATGGCAC 59.189 50.000 0.00 0.00 0.00 5.01
272 273 1.097232 CTGAATCGCTTCCAATGGCA 58.903 50.000 0.00 0.00 0.00 4.92
273 274 0.248784 GCTGAATCGCTTCCAATGGC 60.249 55.000 0.00 0.00 0.00 4.40
274 275 1.065102 CAGCTGAATCGCTTCCAATGG 59.935 52.381 8.42 0.00 38.41 3.16
275 276 1.065102 CCAGCTGAATCGCTTCCAATG 59.935 52.381 17.39 0.00 38.41 2.82
276 277 1.065199 TCCAGCTGAATCGCTTCCAAT 60.065 47.619 17.39 0.00 38.41 3.16
277 278 0.324614 TCCAGCTGAATCGCTTCCAA 59.675 50.000 17.39 0.00 38.41 3.53
278 279 0.543277 ATCCAGCTGAATCGCTTCCA 59.457 50.000 17.39 0.00 38.41 3.53
279 280 2.224161 ACTATCCAGCTGAATCGCTTCC 60.224 50.000 17.39 0.00 38.41 3.46
280 281 2.799412 CACTATCCAGCTGAATCGCTTC 59.201 50.000 17.39 0.00 38.41 3.86
281 282 2.432146 TCACTATCCAGCTGAATCGCTT 59.568 45.455 17.39 0.00 38.41 4.68
282 283 2.034878 TCACTATCCAGCTGAATCGCT 58.965 47.619 17.39 0.00 41.90 4.93
283 284 2.131183 GTCACTATCCAGCTGAATCGC 58.869 52.381 17.39 0.00 0.00 4.58
284 285 3.724508 AGTCACTATCCAGCTGAATCG 57.275 47.619 17.39 0.00 0.00 3.34
285 286 4.808364 GTCAAGTCACTATCCAGCTGAATC 59.192 45.833 17.39 0.00 0.00 2.52
286 287 4.383552 GGTCAAGTCACTATCCAGCTGAAT 60.384 45.833 17.39 1.69 0.00 2.57
287 288 3.055819 GGTCAAGTCACTATCCAGCTGAA 60.056 47.826 17.39 0.00 0.00 3.02
288 289 2.497675 GGTCAAGTCACTATCCAGCTGA 59.502 50.000 17.39 1.21 0.00 4.26
289 290 2.499289 AGGTCAAGTCACTATCCAGCTG 59.501 50.000 6.78 6.78 0.00 4.24
290 291 2.826488 AGGTCAAGTCACTATCCAGCT 58.174 47.619 0.00 0.00 0.00 4.24
291 292 4.342378 TCATAGGTCAAGTCACTATCCAGC 59.658 45.833 0.00 0.00 0.00 4.85
292 293 5.010516 CCTCATAGGTCAAGTCACTATCCAG 59.989 48.000 0.00 0.00 0.00 3.86
293 294 4.895889 CCTCATAGGTCAAGTCACTATCCA 59.104 45.833 0.00 0.00 0.00 3.41
294 295 5.141182 TCCTCATAGGTCAAGTCACTATCC 58.859 45.833 0.00 0.00 36.53 2.59
295 296 6.065374 TCTCCTCATAGGTCAAGTCACTATC 58.935 44.000 0.00 0.00 36.53 2.08
296 297 6.019656 TCTCCTCATAGGTCAAGTCACTAT 57.980 41.667 0.00 0.00 36.53 2.12
297 298 5.452341 TCTCCTCATAGGTCAAGTCACTA 57.548 43.478 0.00 0.00 36.53 2.74
298 299 4.323569 TCTCCTCATAGGTCAAGTCACT 57.676 45.455 0.00 0.00 36.53 3.41
299 300 5.172205 GTTTCTCCTCATAGGTCAAGTCAC 58.828 45.833 0.00 0.00 36.53 3.67
300 301 4.223032 GGTTTCTCCTCATAGGTCAAGTCA 59.777 45.833 0.00 0.00 36.53 3.41
301 302 4.223032 TGGTTTCTCCTCATAGGTCAAGTC 59.777 45.833 0.00 0.00 36.53 3.01
302 303 4.168101 TGGTTTCTCCTCATAGGTCAAGT 58.832 43.478 0.00 0.00 36.53 3.16
303 304 4.223923 ACTGGTTTCTCCTCATAGGTCAAG 59.776 45.833 0.00 0.00 36.53 3.02
304 305 4.168101 ACTGGTTTCTCCTCATAGGTCAA 58.832 43.478 0.00 0.00 36.53 3.18
305 306 3.791320 ACTGGTTTCTCCTCATAGGTCA 58.209 45.455 0.00 0.00 36.53 4.02
306 307 4.828072 AACTGGTTTCTCCTCATAGGTC 57.172 45.455 0.00 0.00 36.53 3.85
307 308 6.023603 TCTTAACTGGTTTCTCCTCATAGGT 58.976 40.000 0.00 0.00 36.53 3.08
308 309 6.546428 TCTTAACTGGTTTCTCCTCATAGG 57.454 41.667 0.00 0.00 36.46 2.57
309 310 8.482128 AGAATCTTAACTGGTTTCTCCTCATAG 58.518 37.037 0.00 0.00 37.07 2.23
310 311 8.380742 AGAATCTTAACTGGTTTCTCCTCATA 57.619 34.615 0.00 0.00 37.07 2.15
311 312 7.264294 AGAATCTTAACTGGTTTCTCCTCAT 57.736 36.000 0.00 0.00 37.07 2.90
312 313 6.688073 AGAATCTTAACTGGTTTCTCCTCA 57.312 37.500 0.00 0.00 37.07 3.86
313 314 7.162082 TCAAGAATCTTAACTGGTTTCTCCTC 58.838 38.462 0.00 0.00 37.07 3.71
314 315 7.079451 TCAAGAATCTTAACTGGTTTCTCCT 57.921 36.000 0.00 0.00 37.07 3.69
315 316 6.937465 ACTCAAGAATCTTAACTGGTTTCTCC 59.063 38.462 0.00 0.00 0.00 3.71
316 317 7.971183 ACTCAAGAATCTTAACTGGTTTCTC 57.029 36.000 0.00 0.00 0.00 2.87
317 318 9.442047 CATACTCAAGAATCTTAACTGGTTTCT 57.558 33.333 0.00 0.00 0.00 2.52
318 319 8.178313 GCATACTCAAGAATCTTAACTGGTTTC 58.822 37.037 0.00 0.00 0.00 2.78
319 320 7.121315 GGCATACTCAAGAATCTTAACTGGTTT 59.879 37.037 0.00 0.00 0.00 3.27
320 321 6.599638 GGCATACTCAAGAATCTTAACTGGTT 59.400 38.462 0.00 0.00 0.00 3.67
321 322 6.116126 GGCATACTCAAGAATCTTAACTGGT 58.884 40.000 0.00 0.00 0.00 4.00
322 323 6.115446 TGGCATACTCAAGAATCTTAACTGG 58.885 40.000 0.00 0.00 0.00 4.00
323 324 6.238320 GCTGGCATACTCAAGAATCTTAACTG 60.238 42.308 0.00 0.00 0.00 3.16
324 325 5.819901 GCTGGCATACTCAAGAATCTTAACT 59.180 40.000 0.00 0.00 0.00 2.24
325 326 5.008118 GGCTGGCATACTCAAGAATCTTAAC 59.992 44.000 0.00 0.00 0.00 2.01
326 327 5.126067 GGCTGGCATACTCAAGAATCTTAA 58.874 41.667 0.00 0.00 0.00 1.85
327 328 4.708177 GGCTGGCATACTCAAGAATCTTA 58.292 43.478 0.00 0.00 0.00 2.10
328 329 3.549794 GGCTGGCATACTCAAGAATCTT 58.450 45.455 0.00 0.00 0.00 2.40
329 330 2.484417 CGGCTGGCATACTCAAGAATCT 60.484 50.000 1.08 0.00 0.00 2.40
330 331 1.869767 CGGCTGGCATACTCAAGAATC 59.130 52.381 1.08 0.00 0.00 2.52
331 332 1.486310 TCGGCTGGCATACTCAAGAAT 59.514 47.619 1.08 0.00 0.00 2.40
332 333 0.901827 TCGGCTGGCATACTCAAGAA 59.098 50.000 1.08 0.00 0.00 2.52
333 334 0.461548 CTCGGCTGGCATACTCAAGA 59.538 55.000 1.08 0.00 0.00 3.02
334 335 0.176680 ACTCGGCTGGCATACTCAAG 59.823 55.000 1.08 0.00 0.00 3.02
335 336 0.175760 GACTCGGCTGGCATACTCAA 59.824 55.000 1.08 0.00 0.00 3.02
336 337 0.970427 TGACTCGGCTGGCATACTCA 60.970 55.000 1.08 0.00 0.00 3.41
337 338 0.528684 GTGACTCGGCTGGCATACTC 60.529 60.000 1.08 0.00 0.00 2.59
338 339 1.517832 GTGACTCGGCTGGCATACT 59.482 57.895 1.08 0.00 0.00 2.12
339 340 1.521681 GGTGACTCGGCTGGCATAC 60.522 63.158 1.08 0.00 0.00 2.39
340 341 2.731571 GGGTGACTCGGCTGGCATA 61.732 63.158 1.08 0.00 0.00 3.14
341 342 4.101448 GGGTGACTCGGCTGGCAT 62.101 66.667 1.08 0.00 0.00 4.40
348 349 3.649277 CTTCCTGCGGGTGACTCGG 62.649 68.421 12.43 0.00 0.00 4.63
349 350 2.125912 CTTCCTGCGGGTGACTCG 60.126 66.667 12.43 0.00 0.00 4.18
350 351 2.113243 AACCTTCCTGCGGGTGACTC 62.113 60.000 12.43 0.00 35.81 3.36
351 352 0.834687 TAACCTTCCTGCGGGTGACT 60.835 55.000 12.43 0.00 35.81 3.41
352 353 0.252197 ATAACCTTCCTGCGGGTGAC 59.748 55.000 12.43 0.00 35.81 3.67
353 354 0.539986 GATAACCTTCCTGCGGGTGA 59.460 55.000 12.43 0.48 35.81 4.02
354 355 0.251916 TGATAACCTTCCTGCGGGTG 59.748 55.000 12.43 5.91 35.81 4.61
355 356 0.988832 TTGATAACCTTCCTGCGGGT 59.011 50.000 12.43 0.00 37.44 5.28
356 357 1.065418 ACTTGATAACCTTCCTGCGGG 60.065 52.381 4.71 4.71 0.00 6.13
357 358 2.403252 ACTTGATAACCTTCCTGCGG 57.597 50.000 0.00 0.00 0.00 5.69
358 359 4.475944 CAAAACTTGATAACCTTCCTGCG 58.524 43.478 0.00 0.00 0.00 5.18
359 360 4.237724 GCAAAACTTGATAACCTTCCTGC 58.762 43.478 0.00 0.00 0.00 4.85
360 361 5.452078 TGCAAAACTTGATAACCTTCCTG 57.548 39.130 0.00 0.00 0.00 3.86
361 362 6.098266 ACTTTGCAAAACTTGATAACCTTCCT 59.902 34.615 13.84 0.00 0.00 3.36
362 363 6.280643 ACTTTGCAAAACTTGATAACCTTCC 58.719 36.000 13.84 0.00 0.00 3.46
363 364 7.491048 TGAACTTTGCAAAACTTGATAACCTTC 59.509 33.333 13.84 1.61 0.00 3.46
364 365 7.327214 TGAACTTTGCAAAACTTGATAACCTT 58.673 30.769 13.84 0.00 0.00 3.50
365 366 6.872920 TGAACTTTGCAAAACTTGATAACCT 58.127 32.000 13.84 0.00 0.00 3.50
366 367 6.756542 ACTGAACTTTGCAAAACTTGATAACC 59.243 34.615 13.84 0.00 0.00 2.85
367 368 7.254084 CCACTGAACTTTGCAAAACTTGATAAC 60.254 37.037 13.84 0.00 0.00 1.89
368 369 6.756074 CCACTGAACTTTGCAAAACTTGATAA 59.244 34.615 13.84 0.00 0.00 1.75
369 370 6.096141 TCCACTGAACTTTGCAAAACTTGATA 59.904 34.615 13.84 0.00 0.00 2.15
370 371 5.105392 TCCACTGAACTTTGCAAAACTTGAT 60.105 36.000 13.84 0.00 0.00 2.57
371 372 4.219507 TCCACTGAACTTTGCAAAACTTGA 59.780 37.500 13.84 1.14 0.00 3.02
372 373 4.493547 TCCACTGAACTTTGCAAAACTTG 58.506 39.130 13.84 3.94 0.00 3.16
373 374 4.220602 ACTCCACTGAACTTTGCAAAACTT 59.779 37.500 13.84 7.37 0.00 2.66
374 375 3.763897 ACTCCACTGAACTTTGCAAAACT 59.236 39.130 13.84 2.71 0.00 2.66
375 376 4.105486 GACTCCACTGAACTTTGCAAAAC 58.895 43.478 13.84 8.31 0.00 2.43
376 377 3.761218 TGACTCCACTGAACTTTGCAAAA 59.239 39.130 13.84 0.00 0.00 2.44
377 378 3.128589 GTGACTCCACTGAACTTTGCAAA 59.871 43.478 12.14 12.14 40.10 3.68
378 379 2.682856 GTGACTCCACTGAACTTTGCAA 59.317 45.455 0.00 0.00 40.10 4.08
379 380 2.288666 GTGACTCCACTGAACTTTGCA 58.711 47.619 0.00 0.00 40.10 4.08
380 381 1.604278 GGTGACTCCACTGAACTTTGC 59.396 52.381 0.00 0.00 42.77 3.68
381 382 2.917933 TGGTGACTCCACTGAACTTTG 58.082 47.619 0.00 0.00 41.93 2.77
392 393 0.745468 GTCCTCGGTATGGTGACTCC 59.255 60.000 0.00 0.00 0.00 3.85
393 394 0.381089 CGTCCTCGGTATGGTGACTC 59.619 60.000 0.00 0.00 0.00 3.36
394 395 0.034767 TCGTCCTCGGTATGGTGACT 60.035 55.000 0.00 0.00 37.69 3.41
395 396 0.813184 TTCGTCCTCGGTATGGTGAC 59.187 55.000 0.00 0.00 37.69 3.67
396 397 1.100510 CTTCGTCCTCGGTATGGTGA 58.899 55.000 0.00 0.00 37.69 4.02
397 398 0.527817 GCTTCGTCCTCGGTATGGTG 60.528 60.000 0.00 0.00 37.69 4.17
398 399 1.673808 GGCTTCGTCCTCGGTATGGT 61.674 60.000 0.00 0.00 37.69 3.55
399 400 1.067582 GGCTTCGTCCTCGGTATGG 59.932 63.158 0.00 0.00 37.69 2.74
400 401 0.527817 GTGGCTTCGTCCTCGGTATG 60.528 60.000 0.00 0.00 37.69 2.39
401 402 1.673808 GGTGGCTTCGTCCTCGGTAT 61.674 60.000 0.00 0.00 37.69 2.73
402 403 2.345760 GGTGGCTTCGTCCTCGGTA 61.346 63.158 0.00 0.00 37.69 4.02
403 404 3.692406 GGTGGCTTCGTCCTCGGT 61.692 66.667 0.00 0.00 37.69 4.69
404 405 3.382832 AGGTGGCTTCGTCCTCGG 61.383 66.667 0.00 0.00 37.69 4.63
405 406 2.125912 CAGGTGGCTTCGTCCTCG 60.126 66.667 0.00 0.00 38.55 4.63
406 407 2.266055 CCAGGTGGCTTCGTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
407 408 3.322466 CCCAGGTGGCTTCGTCCT 61.322 66.667 0.00 0.00 0.00 3.85
408 409 3.316573 CTCCCAGGTGGCTTCGTCC 62.317 68.421 0.00 0.00 0.00 4.79
409 410 2.266055 CTCCCAGGTGGCTTCGTC 59.734 66.667 0.00 0.00 0.00 4.20
410 411 4.021925 GCTCCCAGGTGGCTTCGT 62.022 66.667 0.00 0.00 0.00 3.85
412 413 3.672295 CTCGCTCCCAGGTGGCTTC 62.672 68.421 0.00 0.00 0.00 3.86
413 414 3.710722 CTCGCTCCCAGGTGGCTT 61.711 66.667 0.00 0.00 0.00 4.35
414 415 4.704103 TCTCGCTCCCAGGTGGCT 62.704 66.667 0.00 0.00 0.00 4.75
415 416 4.154347 CTCTCGCTCCCAGGTGGC 62.154 72.222 0.00 0.00 0.00 5.01
416 417 3.465403 CCTCTCGCTCCCAGGTGG 61.465 72.222 0.00 0.00 0.00 4.61
417 418 1.954362 CTTCCTCTCGCTCCCAGGTG 61.954 65.000 0.00 0.00 0.00 4.00
418 419 1.684049 CTTCCTCTCGCTCCCAGGT 60.684 63.158 0.00 0.00 0.00 4.00
419 420 0.758685 ATCTTCCTCTCGCTCCCAGG 60.759 60.000 0.00 0.00 0.00 4.45
420 421 0.673437 GATCTTCCTCTCGCTCCCAG 59.327 60.000 0.00 0.00 0.00 4.45
421 422 0.260230 AGATCTTCCTCTCGCTCCCA 59.740 55.000 0.00 0.00 0.00 4.37
422 423 1.883926 GTAGATCTTCCTCTCGCTCCC 59.116 57.143 0.00 0.00 0.00 4.30
423 424 1.533731 CGTAGATCTTCCTCTCGCTCC 59.466 57.143 0.00 0.00 0.00 4.70
424 425 1.533731 CCGTAGATCTTCCTCTCGCTC 59.466 57.143 0.00 0.00 0.00 5.03
425 426 1.141254 TCCGTAGATCTTCCTCTCGCT 59.859 52.381 0.00 0.00 0.00 4.93
426 427 1.595466 TCCGTAGATCTTCCTCTCGC 58.405 55.000 0.00 0.00 0.00 5.03
427 428 3.468770 TCTTCCGTAGATCTTCCTCTCG 58.531 50.000 0.00 0.00 0.00 4.04
428 429 4.641094 TGTTCTTCCGTAGATCTTCCTCTC 59.359 45.833 0.00 0.00 31.54 3.20
429 430 4.601084 TGTTCTTCCGTAGATCTTCCTCT 58.399 43.478 0.00 0.00 31.54 3.69
430 431 4.985538 TGTTCTTCCGTAGATCTTCCTC 57.014 45.455 0.00 0.00 31.54 3.71
431 432 4.773149 AGTTGTTCTTCCGTAGATCTTCCT 59.227 41.667 0.00 0.00 31.54 3.36
432 433 5.074584 AGTTGTTCTTCCGTAGATCTTCC 57.925 43.478 0.00 0.00 31.54 3.46
433 434 5.956642 AGAGTTGTTCTTCCGTAGATCTTC 58.043 41.667 0.00 0.00 29.61 2.87
434 435 5.477291 TGAGAGTTGTTCTTCCGTAGATCTT 59.523 40.000 0.00 0.00 35.87 2.40
435 436 5.010933 TGAGAGTTGTTCTTCCGTAGATCT 58.989 41.667 0.00 0.00 35.87 2.75
436 437 5.096849 GTGAGAGTTGTTCTTCCGTAGATC 58.903 45.833 0.00 0.00 35.87 2.75
437 438 4.379603 CGTGAGAGTTGTTCTTCCGTAGAT 60.380 45.833 0.00 0.00 35.87 1.98
438 439 3.058432 CGTGAGAGTTGTTCTTCCGTAGA 60.058 47.826 0.00 0.00 35.87 2.59
439 440 3.058432 TCGTGAGAGTTGTTCTTCCGTAG 60.058 47.826 0.00 0.00 35.87 3.51
440 441 2.880268 TCGTGAGAGTTGTTCTTCCGTA 59.120 45.455 0.00 0.00 35.87 4.02
441 442 1.679680 TCGTGAGAGTTGTTCTTCCGT 59.320 47.619 0.00 0.00 35.87 4.69
442 443 2.417339 TCGTGAGAGTTGTTCTTCCG 57.583 50.000 0.00 0.00 35.87 4.30
454 455 3.503827 ACGTGCAATTATCTCGTGAGA 57.496 42.857 1.43 1.43 42.37 3.27
455 456 4.976116 TGATACGTGCAATTATCTCGTGAG 59.024 41.667 14.09 0.00 35.64 3.51
456 457 4.927422 TGATACGTGCAATTATCTCGTGA 58.073 39.130 14.09 0.00 35.64 4.35
457 458 5.164051 GGATGATACGTGCAATTATCTCGTG 60.164 44.000 14.09 0.00 35.64 4.35
458 459 4.923871 GGATGATACGTGCAATTATCTCGT 59.076 41.667 14.09 8.86 37.42 4.18
834 858 2.741228 GCCATCTTCGCTCTCAACATCT 60.741 50.000 0.00 0.00 0.00 2.90
1173 1197 5.123979 GCACTTTTCCTCCGTTGAGAATAAT 59.876 40.000 0.00 0.00 41.42 1.28
1311 1353 0.402121 GGAGCCCTTCCAAACTGAGT 59.598 55.000 0.00 0.00 46.01 3.41
1906 1948 8.574251 AGATCCATACATAGATAGTCTGTCAC 57.426 38.462 0.00 0.00 0.00 3.67
2530 2575 3.824443 AGGGGTGGTTGAAAATTAACGAG 59.176 43.478 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.