Multiple sequence alignment - TraesCS2D01G236000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G236000 chr2D 100.000 5863 0 0 1 5863 228437807 228431945 0.000000e+00 10828.0
1 TraesCS2D01G236000 chr2D 85.088 114 15 2 3024 3136 195292174 195292286 1.340000e-21 115.0
2 TraesCS2D01G236000 chrUn 95.281 2882 107 9 1 2856 156531789 156528911 0.000000e+00 4542.0
3 TraesCS2D01G236000 chrUn 94.586 1995 78 7 3143 5133 156526732 156524764 0.000000e+00 3059.0
4 TraesCS2D01G236000 chrUn 94.561 239 12 1 2903 3141 156526928 156526691 9.280000e-98 368.0
5 TraesCS2D01G236000 chrUn 100.000 52 0 0 2856 2907 156528889 156528838 4.840000e-16 97.1
6 TraesCS2D01G236000 chr2A 96.591 2640 40 18 504 3141 312314706 312317297 0.000000e+00 4331.0
7 TraesCS2D01G236000 chr2A 97.271 1942 42 6 3143 5077 312317256 312319193 0.000000e+00 3282.0
8 TraesCS2D01G236000 chr2A 91.537 449 37 1 1 449 312264396 312264843 8.350000e-173 617.0
9 TraesCS2D01G236000 chr2A 87.709 358 10 13 5058 5408 312319210 312319540 2.560000e-103 387.0
10 TraesCS2D01G236000 chr2A 90.598 234 17 4 5418 5647 412038407 412038639 7.380000e-79 305.0
11 TraesCS2D01G236000 chr3A 94.225 329 14 3 5415 5738 405698320 405697992 1.130000e-136 497.0
12 TraesCS2D01G236000 chr3A 85.714 70 2 8 3600 3664 10358647 10358581 3.790000e-07 67.6
13 TraesCS2D01G236000 chr1D 94.583 240 10 2 5413 5649 207138723 207138962 9.280000e-98 368.0
14 TraesCS2D01G236000 chr1D 94.400 125 7 0 5739 5863 46472647 46472523 6.000000e-45 193.0
15 TraesCS2D01G236000 chr1D 81.215 181 29 3 4045 4224 225420154 225419978 2.200000e-29 141.0
16 TraesCS2D01G236000 chr1D 88.073 109 12 1 3035 3143 246414821 246414714 1.710000e-25 128.0
17 TraesCS2D01G236000 chr1D 92.500 40 2 1 3177 3215 162053332 162053371 8.210000e-04 56.5
18 TraesCS2D01G236000 chr6A 87.195 328 24 9 5418 5738 926622 926938 2.010000e-94 357.0
19 TraesCS2D01G236000 chr6A 92.754 69 2 2 3590 3658 115275491 115275426 4.840000e-16 97.1
20 TraesCS2D01G236000 chr6A 89.394 66 7 0 3590 3655 544458585 544458520 3.770000e-12 84.2
21 TraesCS2D01G236000 chr5B 92.946 241 13 3 5413 5649 214140944 214141184 1.210000e-91 348.0
22 TraesCS2D01G236000 chr2B 92.469 239 15 2 5414 5649 800489270 800489508 7.280000e-89 339.0
23 TraesCS2D01G236000 chr2B 95.902 122 5 0 5742 5863 704579255 704579134 1.290000e-46 198.0
24 TraesCS2D01G236000 chr2B 89.286 56 5 1 3071 3125 283176123 283176068 1.050000e-07 69.4
25 TraesCS2D01G236000 chr7B 92.116 241 15 3 5413 5649 442537611 442537371 2.620000e-88 337.0
26 TraesCS2D01G236000 chr7B 94.915 59 1 1 3597 3655 731107266 731107210 2.250000e-14 91.6
27 TraesCS2D01G236000 chr3D 92.166 217 12 4 5435 5647 254985413 254985628 9.550000e-78 302.0
28 TraesCS2D01G236000 chr3D 97.600 125 3 0 5739 5863 47753148 47753024 1.280000e-51 215.0
29 TraesCS2D01G236000 chr3D 92.308 65 2 1 3594 3655 81695017 81695081 8.090000e-14 89.8
30 TraesCS2D01G236000 chr3D 92.857 56 4 0 5679 5734 608436140 608436085 1.350000e-11 82.4
31 TraesCS2D01G236000 chr3D 94.000 50 3 0 5685 5734 608435576 608435527 6.300000e-10 76.8
32 TraesCS2D01G236000 chr6B 86.864 236 25 5 5416 5647 57697912 57697679 5.830000e-65 259.0
33 TraesCS2D01G236000 chr6B 95.420 131 6 0 5732 5862 530575589 530575459 5.950000e-50 209.0
34 TraesCS2D01G236000 chr5D 97.638 127 3 0 5736 5862 520351447 520351321 9.890000e-53 219.0
35 TraesCS2D01G236000 chr5D 88.889 54 6 0 5681 5734 391896251 391896198 3.790000e-07 67.6
36 TraesCS2D01G236000 chr7A 97.581 124 3 0 5739 5862 206925650 206925527 4.600000e-51 213.0
37 TraesCS2D01G236000 chr7A 82.812 192 21 10 4043 4229 279181732 279181916 1.690000e-35 161.0
38 TraesCS2D01G236000 chr6D 94.444 126 7 0 5737 5862 335396347 335396222 1.670000e-45 195.0
39 TraesCS2D01G236000 chr6D 81.006 179 27 5 4045 4221 159123997 159124170 1.020000e-27 135.0
40 TraesCS2D01G236000 chr6D 92.647 68 2 2 3591 3655 24933429 24933496 1.740000e-15 95.3
41 TraesCS2D01G236000 chr7D 94.400 125 5 1 5739 5863 246149209 246149087 2.160000e-44 191.0
42 TraesCS2D01G236000 chr7D 93.701 127 6 1 5739 5863 457198941 457199067 7.760000e-44 189.0
43 TraesCS2D01G236000 chr7D 81.006 179 27 5 4045 4221 505208971 505208798 1.020000e-27 135.0
44 TraesCS2D01G236000 chr3B 81.868 182 26 5 4045 4224 561432920 561432744 4.730000e-31 147.0
45 TraesCS2D01G236000 chr3B 94.030 67 4 0 3590 3656 730314065 730313999 1.040000e-17 102.0
46 TraesCS2D01G236000 chr3B 93.023 43 3 0 3032 3074 558549045 558549003 4.900000e-06 63.9
47 TraesCS2D01G236000 chr1B 83.648 159 20 5 4067 4224 325283480 325283327 1.700000e-30 145.0
48 TraesCS2D01G236000 chr5A 89.286 112 11 1 3035 3146 246834593 246834483 7.920000e-29 139.0
49 TraesCS2D01G236000 chr4D 81.006 179 27 5 4045 4221 453643097 453643270 1.020000e-27 135.0
50 TraesCS2D01G236000 chr4D 92.857 56 4 0 5679 5734 175183350 175183295 1.350000e-11 82.4
51 TraesCS2D01G236000 chr1A 92.063 63 2 2 3592 3654 474227500 474227559 1.050000e-12 86.1
52 TraesCS2D01G236000 chr1A 92.857 56 4 0 5679 5734 429024164 429024219 1.350000e-11 82.4
53 TraesCS2D01G236000 chr4A 92.857 56 4 0 5679 5734 677989340 677989395 1.350000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G236000 chr2D 228431945 228437807 5862 True 10828.000000 10828 100.000 1 5863 1 chr2D.!!$R1 5862
1 TraesCS2D01G236000 chrUn 156524764 156531789 7025 True 2016.525000 4542 96.107 1 5133 4 chrUn.!!$R1 5132
2 TraesCS2D01G236000 chr2A 312314706 312319540 4834 False 2666.666667 4331 93.857 504 5408 3 chr2A.!!$F3 4904

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.036875 ACTCTAACCCAACCTGCAGC 59.963 55.000 8.66 0.0 0.00 5.25 F
344 345 0.037326 TCTTCAGCGGACACCATCAC 60.037 55.000 0.00 0.0 0.00 3.06 F
347 348 0.037326 TCAGCGGACACCATCACTTC 60.037 55.000 0.00 0.0 0.00 3.01 F
365 366 1.117150 TCTAGGCCCCGTACATGTTC 58.883 55.000 2.30 0.0 0.00 3.18 F
473 474 2.661176 ACCCATCTTGGTTCCCTCTA 57.339 50.000 0.00 0.0 33.91 2.43 F
474 475 3.151542 ACCCATCTTGGTTCCCTCTAT 57.848 47.619 0.00 0.0 33.91 1.98 F
2429 2460 3.311322 TGTCGTAAACTTGCAACTTCTGG 59.689 43.478 0.00 0.0 0.00 3.86 F
3138 5105 0.527113 TGCGCATGCTTAAGTGCAAT 59.473 45.000 17.13 0.0 46.91 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 1728 1.059369 CCTTCAAGCGCGTTCATCG 59.941 57.895 8.43 0.00 43.12 3.84 R
2385 2416 4.766891 CAGTCCTTTTCCTTGCCATTTCTA 59.233 41.667 0.00 0.00 0.00 2.10 R
2429 2460 1.334869 CTTTGCGCCTATGTCCATTCC 59.665 52.381 4.18 0.00 0.00 3.01 R
2907 4874 5.547465 TGCCTAACCAATGATAAGGATACG 58.453 41.667 0.00 0.00 46.39 3.06 R
2983 4950 4.819630 TGTAGTAAAACTGCCAACAAGGAG 59.180 41.667 0.00 0.00 41.22 3.69 R
3134 5101 3.180980 CACTTAAGCATGCGCATAATTGC 59.819 43.478 24.84 23.63 45.78 3.56 R
3340 5307 1.160137 CAGGCCAGAAGAGGAAAACG 58.840 55.000 5.01 0.00 0.00 3.60 R
5189 7212 0.031314 AGCACACCTCGCTATCGATG 59.969 55.000 8.54 0.00 44.56 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.598701 CCAGCAAGGCCCAAAGCTAC 61.599 60.000 0.00 0.00 43.05 3.58
31 32 2.618053 CCCAAAGCTACGTTAGGTCAG 58.382 52.381 0.00 0.00 35.05 3.51
55 56 0.608640 CTCGCACTCTAACCCAACCT 59.391 55.000 0.00 0.00 0.00 3.50
60 61 0.036875 ACTCTAACCCAACCTGCAGC 59.963 55.000 8.66 0.00 0.00 5.25
151 152 0.259938 ATGGATGGGTTTGGAGCTCC 59.740 55.000 26.78 26.78 0.00 4.70
161 162 1.344065 TTGGAGCTCCGTACAAGGAA 58.656 50.000 27.43 10.90 40.25 3.36
163 164 0.175989 GGAGCTCCGTACAAGGAAGG 59.824 60.000 19.06 0.00 40.25 3.46
165 166 1.757699 GAGCTCCGTACAAGGAAGGAT 59.242 52.381 0.87 0.00 40.25 3.24
171 172 3.516300 TCCGTACAAGGAAGGATGCTTAA 59.484 43.478 0.00 0.00 34.65 1.85
178 179 5.045286 ACAAGGAAGGATGCTTAATGAGACT 60.045 40.000 0.00 0.00 34.65 3.24
181 182 6.488715 AGGAAGGATGCTTAATGAGACTTTT 58.511 36.000 0.00 0.00 0.00 2.27
182 183 6.950619 AGGAAGGATGCTTAATGAGACTTTTT 59.049 34.615 0.00 0.00 0.00 1.94
209 210 0.665670 CTCTCCATCTGTATGCGGCG 60.666 60.000 0.51 0.51 0.00 6.46
216 217 3.693382 CTGTATGCGGCGGTCGACA 62.693 63.158 18.91 3.60 42.43 4.35
240 241 1.849039 CCTCCAACCCTCCTGATTCAT 59.151 52.381 0.00 0.00 0.00 2.57
242 243 2.507058 CTCCAACCCTCCTGATTCATGA 59.493 50.000 0.00 0.00 0.00 3.07
267 268 1.090052 GTTGCCACCTCTACCGCATC 61.090 60.000 0.00 0.00 0.00 3.91
269 270 2.279517 CCACCTCTACCGCATCGC 60.280 66.667 0.00 0.00 0.00 4.58
275 276 4.910585 CTACCGCATCGCCCCCAC 62.911 72.222 0.00 0.00 0.00 4.61
293 294 1.813753 CCGGCAGGTTGTGTATCCG 60.814 63.158 0.00 0.00 36.90 4.18
310 311 2.417097 GGCAAGCCACCACAACAC 59.583 61.111 6.14 0.00 35.81 3.32
312 313 3.128375 CAAGCCACCACAACACCC 58.872 61.111 0.00 0.00 0.00 4.61
316 317 1.971695 GCCACCACAACACCCTAGC 60.972 63.158 0.00 0.00 0.00 3.42
328 329 1.374252 CCCTAGCGTGCGTTGTCTT 60.374 57.895 0.00 0.00 0.00 3.01
330 331 0.666274 CCTAGCGTGCGTTGTCTTCA 60.666 55.000 0.00 0.00 0.00 3.02
336 337 1.954146 TGCGTTGTCTTCAGCGGAC 60.954 57.895 6.60 0.00 45.68 4.79
341 342 0.396435 TTGTCTTCAGCGGACACCAT 59.604 50.000 0.00 0.00 42.41 3.55
344 345 0.037326 TCTTCAGCGGACACCATCAC 60.037 55.000 0.00 0.00 0.00 3.06
347 348 0.037326 TCAGCGGACACCATCACTTC 60.037 55.000 0.00 0.00 0.00 3.01
356 357 1.338136 ACCATCACTTCTAGGCCCCG 61.338 60.000 0.00 0.00 0.00 5.73
357 358 1.338136 CCATCACTTCTAGGCCCCGT 61.338 60.000 0.00 0.00 0.00 5.28
365 366 1.117150 TCTAGGCCCCGTACATGTTC 58.883 55.000 2.30 0.00 0.00 3.18
408 409 3.756434 TCTTCCCAAAATCGGTCATGTTC 59.244 43.478 0.00 0.00 0.00 3.18
414 415 5.700373 CCCAAAATCGGTCATGTTCATTTTT 59.300 36.000 0.00 0.00 0.00 1.94
419 420 6.768029 ATCGGTCATGTTCATTTTTGTTTG 57.232 33.333 0.00 0.00 0.00 2.93
439 440 8.741101 TGTTTGTCATATATTTGTTGTCAAGC 57.259 30.769 0.00 0.00 34.88 4.01
464 465 8.739972 GCCTGTATATATAAAAACCCATCTTGG 58.260 37.037 0.00 0.00 37.25 3.61
473 474 2.661176 ACCCATCTTGGTTCCCTCTA 57.339 50.000 0.00 0.00 33.91 2.43
474 475 3.151542 ACCCATCTTGGTTCCCTCTAT 57.848 47.619 0.00 0.00 33.91 1.98
476 477 3.459969 ACCCATCTTGGTTCCCTCTATTC 59.540 47.826 0.00 0.00 33.91 1.75
585 587 7.227512 GTCAAGTCTAGTACCGGCTATAAACTA 59.772 40.741 0.00 0.00 0.00 2.24
771 802 3.714391 AGACACGAGGAGTAAACACAAC 58.286 45.455 0.00 0.00 0.00 3.32
778 809 3.467803 AGGAGTAAACACAACAGAGCAC 58.532 45.455 0.00 0.00 0.00 4.40
1697 1728 5.885912 TGATTAACCACAAAGATAAGGAGGC 59.114 40.000 0.00 0.00 0.00 4.70
2064 2095 4.210955 GCGCTTAAGATGGATTCTTCAGAG 59.789 45.833 6.67 0.00 43.75 3.35
2385 2416 7.180051 GTGGATATAGTGAGAAGGGATGAGAAT 59.820 40.741 0.00 0.00 0.00 2.40
2429 2460 3.311322 TGTCGTAAACTTGCAACTTCTGG 59.689 43.478 0.00 0.00 0.00 3.86
2680 2711 3.692593 TCATGATGCAATGTCTTCACTGG 59.307 43.478 0.00 0.00 0.00 4.00
2907 4874 8.072567 CCGTAGTTAACATATCTGTACACCTAC 58.927 40.741 8.61 0.00 33.36 3.18
3133 5100 3.374745 GCAATTATGCGCATGCTTAAGT 58.625 40.909 32.48 15.17 43.83 2.24
3134 5101 4.941727 CAATTATGCGCATGCTTAAGTG 57.058 40.909 32.48 22.37 44.58 3.16
3135 5102 2.473530 TTATGCGCATGCTTAAGTGC 57.526 45.000 32.48 11.06 43.34 4.40
3137 5104 1.955285 TGCGCATGCTTAAGTGCAA 59.045 47.368 17.13 3.48 46.91 4.08
3138 5105 0.527113 TGCGCATGCTTAAGTGCAAT 59.473 45.000 17.13 0.00 46.91 3.56
3139 5106 1.067706 TGCGCATGCTTAAGTGCAATT 60.068 42.857 17.13 4.23 46.91 2.32
3140 5107 2.163211 TGCGCATGCTTAAGTGCAATTA 59.837 40.909 17.13 1.78 46.91 1.40
3141 5108 3.181488 TGCGCATGCTTAAGTGCAATTAT 60.181 39.130 17.13 0.00 46.91 1.28
3142 5109 3.180980 GCGCATGCTTAAGTGCAATTATG 59.819 43.478 17.13 11.09 46.61 1.90
3143 5110 6.339810 GCGCATGCTTAAGTGCAATTATGC 62.340 45.833 27.91 27.91 46.61 3.14
3155 5122 3.374745 GCAATTATGCGCATGCTTAAGT 58.625 40.909 32.48 15.17 43.83 2.24
3156 5123 4.941727 CAATTATGCGCATGCTTAAGTG 57.058 40.909 32.48 22.37 44.58 3.16
3157 5124 4.353737 CAATTATGCGCATGCTTAAGTGT 58.646 39.130 32.48 5.52 44.74 3.55
3158 5125 5.509771 CAATTATGCGCATGCTTAAGTGTA 58.490 37.500 32.48 5.53 44.74 2.90
3159 5126 5.749596 ATTATGCGCATGCTTAAGTGTAA 57.250 34.783 32.48 14.78 42.03 2.41
3160 5127 5.749596 TTATGCGCATGCTTAAGTGTAAT 57.250 34.783 32.48 4.21 43.34 1.89
3161 5128 4.637483 ATGCGCATGCTTAAGTGTAATT 57.363 36.364 24.69 0.00 43.34 1.40
3162 5129 5.749596 ATGCGCATGCTTAAGTGTAATTA 57.250 34.783 24.69 0.00 43.34 1.40
3163 5130 5.749596 TGCGCATGCTTAAGTGTAATTAT 57.250 34.783 17.13 0.00 43.34 1.28
3164 5131 5.509771 TGCGCATGCTTAAGTGTAATTATG 58.490 37.500 17.13 0.00 43.34 1.90
3165 5132 4.379793 GCGCATGCTTAAGTGTAATTATGC 59.620 41.667 17.13 1.54 36.29 3.14
3169 5136 6.751425 GCATGCTTAAGTGTAATTATGCACAA 59.249 34.615 11.37 0.00 43.99 3.33
3182 5149 1.700523 TGCACAAATCAAGCGCAATC 58.299 45.000 11.47 0.00 0.00 2.67
3433 5401 6.676950 ACGTGAGATGCATAACAATTCAAAA 58.323 32.000 0.00 0.00 0.00 2.44
3436 5404 9.288124 CGTGAGATGCATAACAATTCAAAATAA 57.712 29.630 0.00 0.00 0.00 1.40
3620 5588 7.909485 TCCCTCCGTAAAGAAATATAAGAGT 57.091 36.000 0.00 0.00 0.00 3.24
3823 5791 6.864360 TCATTTTGAAGCCCTTTTTGAATG 57.136 33.333 0.00 0.00 0.00 2.67
4041 6009 3.242867 TCTGATCTCCACAAACTGAGGT 58.757 45.455 0.00 0.00 29.78 3.85
4042 6010 3.648067 TCTGATCTCCACAAACTGAGGTT 59.352 43.478 0.00 0.00 37.24 3.50
4051 6019 4.035675 CCACAAACTGAGGTTCTCTTTGAC 59.964 45.833 13.12 0.00 33.11 3.18
4178 6152 9.886132 TTCCTTAGGATTCATTTGTACTAGTTC 57.114 33.333 0.12 0.00 0.00 3.01
4214 6188 2.171237 CCATCAACTCCAGCCTCATGTA 59.829 50.000 0.00 0.00 0.00 2.29
4733 6707 6.590234 AACAAGAACAAGTCAAAGAAAGGT 57.410 33.333 0.00 0.00 0.00 3.50
4892 6869 0.877071 CTGCTGCAGGTAACAAGTGG 59.123 55.000 21.71 0.00 41.41 4.00
4912 6889 1.529438 GCGAATGTCGAGAAACAACCA 59.471 47.619 1.05 0.00 43.74 3.67
5036 7013 4.990426 GGCTTGTTGATATTTGCAGTGTTT 59.010 37.500 0.00 0.00 0.00 2.83
5062 7039 2.899900 TGAGCCGTCAGAGCCATATTAT 59.100 45.455 0.00 0.00 0.00 1.28
5063 7040 3.324846 TGAGCCGTCAGAGCCATATTATT 59.675 43.478 0.00 0.00 0.00 1.40
5064 7041 4.526650 TGAGCCGTCAGAGCCATATTATTA 59.473 41.667 0.00 0.00 0.00 0.98
5105 7121 5.152934 GGTTAGGAGGGTAATGGTATCTCA 58.847 45.833 0.00 0.00 0.00 3.27
5158 7181 7.946207 TCATGTTTTGGTATCTTACAAAAGCA 58.054 30.769 6.55 6.55 43.69 3.91
5188 7211 1.255882 TAAGTGGGAGGCGACGTTTA 58.744 50.000 0.00 0.00 0.00 2.01
5189 7212 0.320160 AAGTGGGAGGCGACGTTTAC 60.320 55.000 0.00 0.00 0.00 2.01
5190 7213 1.005867 GTGGGAGGCGACGTTTACA 60.006 57.895 0.00 0.00 0.00 2.41
5199 7222 1.120199 GCGACGTTTACATCGATAGCG 59.880 52.381 2.24 0.00 40.86 4.26
5208 7231 3.920031 TCGATAGCGAGGTGTGCT 58.080 55.556 0.00 0.00 42.51 4.40
5209 7232 1.728069 TCGATAGCGAGGTGTGCTC 59.272 57.895 0.00 0.00 42.85 4.26
5210 7233 1.029947 TCGATAGCGAGGTGTGCTCA 61.030 55.000 0.00 0.00 42.85 4.26
5211 7234 0.031314 CGATAGCGAGGTGTGCTCAT 59.969 55.000 0.00 0.00 42.85 2.90
5212 7235 1.266989 CGATAGCGAGGTGTGCTCATA 59.733 52.381 0.00 0.00 42.85 2.15
5213 7236 2.666895 CGATAGCGAGGTGTGCTCATAG 60.667 54.545 0.00 0.00 42.85 2.23
5214 7237 2.052782 TAGCGAGGTGTGCTCATAGA 57.947 50.000 0.00 0.00 42.85 1.98
5215 7238 1.186200 AGCGAGGTGTGCTCATAGAA 58.814 50.000 0.00 0.00 38.62 2.10
5216 7239 1.135915 AGCGAGGTGTGCTCATAGAAG 59.864 52.381 0.00 0.00 38.62 2.85
5217 7240 1.134965 GCGAGGTGTGCTCATAGAAGT 60.135 52.381 0.00 0.00 0.00 3.01
5218 7241 2.534298 CGAGGTGTGCTCATAGAAGTG 58.466 52.381 0.00 0.00 0.00 3.16
5219 7242 2.094494 CGAGGTGTGCTCATAGAAGTGT 60.094 50.000 0.00 0.00 0.00 3.55
5220 7243 3.516615 GAGGTGTGCTCATAGAAGTGTC 58.483 50.000 0.00 0.00 0.00 3.67
5221 7244 2.234908 AGGTGTGCTCATAGAAGTGTCC 59.765 50.000 0.00 0.00 0.00 4.02
5222 7245 2.234908 GGTGTGCTCATAGAAGTGTCCT 59.765 50.000 0.00 0.00 0.00 3.85
5223 7246 3.516615 GTGTGCTCATAGAAGTGTCCTC 58.483 50.000 0.00 0.00 0.00 3.71
5224 7247 3.194542 GTGTGCTCATAGAAGTGTCCTCT 59.805 47.826 0.00 0.00 0.00 3.69
5253 7276 7.340699 GTGTGCTCATAGAAGTATTTGATTCG 58.659 38.462 0.00 0.00 0.00 3.34
5306 7329 8.028540 TGTGTGTTTATAGTGATGAATGTGTC 57.971 34.615 0.00 0.00 0.00 3.67
5336 7359 5.127194 TGTTTGAGAGTGTCTGTTCTGTACT 59.873 40.000 0.00 0.00 0.00 2.73
5340 7363 4.207955 AGAGTGTCTGTTCTGTACTGTGA 58.792 43.478 0.00 0.00 0.00 3.58
5408 7431 5.578776 GGGTTGTACAGTGTTTCTGAAAAG 58.421 41.667 0.00 0.00 46.27 2.27
5409 7432 5.449999 GGGTTGTACAGTGTTTCTGAAAAGG 60.450 44.000 0.00 0.00 46.27 3.11
5410 7433 5.449999 GGTTGTACAGTGTTTCTGAAAAGGG 60.450 44.000 0.00 0.00 46.27 3.95
5411 7434 3.630312 TGTACAGTGTTTCTGAAAAGGGC 59.370 43.478 0.00 0.00 46.27 5.19
5412 7435 2.733956 ACAGTGTTTCTGAAAAGGGCA 58.266 42.857 4.09 0.00 46.27 5.36
5413 7436 3.096092 ACAGTGTTTCTGAAAAGGGCAA 58.904 40.909 4.09 0.00 46.27 4.52
5414 7437 3.513515 ACAGTGTTTCTGAAAAGGGCAAA 59.486 39.130 4.09 0.00 46.27 3.68
5415 7438 4.114794 CAGTGTTTCTGAAAAGGGCAAAG 58.885 43.478 4.09 0.00 46.27 2.77
5416 7439 3.132824 AGTGTTTCTGAAAAGGGCAAAGG 59.867 43.478 4.09 0.00 0.00 3.11
5417 7440 2.433970 TGTTTCTGAAAAGGGCAAAGGG 59.566 45.455 4.09 0.00 0.00 3.95
5418 7441 1.047801 TTCTGAAAAGGGCAAAGGGC 58.952 50.000 0.00 0.00 43.74 5.19
5425 7448 3.875510 AGGGCAAAGGGCAGCACTC 62.876 63.158 0.00 0.00 41.53 3.51
5427 7450 2.960170 GCAAAGGGCAGCACTCTG 59.040 61.111 0.00 0.00 43.97 3.35
5461 7484 3.047735 CAAACTTTGGGCCGGTCC 58.952 61.111 21.35 21.35 0.00 4.46
5462 7485 1.830408 CAAACTTTGGGCCGGTCCA 60.830 57.895 27.82 27.82 36.21 4.02
5463 7486 1.075896 AAACTTTGGGCCGGTCCAA 60.076 52.632 36.45 36.45 44.29 3.53
5464 7487 1.396607 AAACTTTGGGCCGGTCCAAC 61.397 55.000 39.58 6.99 45.48 3.77
5465 7488 2.989253 CTTTGGGCCGGTCCAACC 60.989 66.667 39.58 13.82 45.48 3.77
5466 7489 4.607025 TTTGGGCCGGTCCAACCC 62.607 66.667 39.58 23.21 45.48 4.11
5474 7497 4.280019 GGTCCAACCCTGGCCGTT 62.280 66.667 0.00 0.00 43.17 4.44
5475 7498 2.751688 GTCCAACCCTGGCCGTTA 59.248 61.111 0.00 0.00 43.17 3.18
5476 7499 1.376812 GTCCAACCCTGGCCGTTAG 60.377 63.158 0.00 0.00 43.17 2.34
5477 7500 1.536907 TCCAACCCTGGCCGTTAGA 60.537 57.895 0.00 0.00 43.17 2.10
5478 7501 0.912487 TCCAACCCTGGCCGTTAGAT 60.912 55.000 0.00 0.00 43.17 1.98
5479 7502 0.748005 CCAACCCTGGCCGTTAGATG 60.748 60.000 0.00 0.00 35.39 2.90
5480 7503 1.077716 AACCCTGGCCGTTAGATGC 60.078 57.895 0.00 0.00 0.00 3.91
5481 7504 2.588877 CCCTGGCCGTTAGATGCG 60.589 66.667 0.00 0.00 0.00 4.73
5482 7505 3.272334 CCTGGCCGTTAGATGCGC 61.272 66.667 0.00 0.00 0.00 6.09
5483 7506 3.272334 CTGGCCGTTAGATGCGCC 61.272 66.667 4.18 0.00 0.00 6.53
5484 7507 4.849310 TGGCCGTTAGATGCGCCC 62.849 66.667 4.18 0.00 0.00 6.13
5500 7523 3.991051 CCCGCATAGCCGTCGGAT 61.991 66.667 17.49 12.48 45.53 4.18
5501 7524 2.430921 CCGCATAGCCGTCGGATC 60.431 66.667 17.49 0.00 45.53 3.36
5502 7525 2.335011 CGCATAGCCGTCGGATCA 59.665 61.111 17.49 0.00 0.00 2.92
5503 7526 2.016704 CGCATAGCCGTCGGATCAC 61.017 63.158 17.49 0.40 0.00 3.06
5504 7527 2.016704 GCATAGCCGTCGGATCACG 61.017 63.158 17.49 1.56 46.11 4.35
5505 7528 2.016704 CATAGCCGTCGGATCACGC 61.017 63.158 17.49 0.00 43.86 5.34
5506 7529 2.194212 ATAGCCGTCGGATCACGCT 61.194 57.895 17.49 6.03 43.86 5.07
5507 7530 2.131294 ATAGCCGTCGGATCACGCTC 62.131 60.000 17.49 0.00 43.86 5.03
5508 7531 4.194720 GCCGTCGGATCACGCTCT 62.195 66.667 17.49 0.00 43.86 4.09
5509 7532 2.490217 CCGTCGGATCACGCTCTT 59.510 61.111 4.91 0.00 43.86 2.85
5510 7533 1.153823 CCGTCGGATCACGCTCTTT 60.154 57.895 4.91 0.00 43.86 2.52
5511 7534 1.413767 CCGTCGGATCACGCTCTTTG 61.414 60.000 4.91 0.00 43.86 2.77
5512 7535 1.710339 GTCGGATCACGCTCTTTGC 59.290 57.895 0.00 0.00 43.86 3.68
5513 7536 1.447838 TCGGATCACGCTCTTTGCC 60.448 57.895 0.00 0.00 43.86 4.52
5514 7537 1.741401 CGGATCACGCTCTTTGCCA 60.741 57.895 0.00 0.00 38.78 4.92
5515 7538 1.699656 CGGATCACGCTCTTTGCCAG 61.700 60.000 0.00 0.00 38.78 4.85
5516 7539 1.427020 GATCACGCTCTTTGCCAGC 59.573 57.895 0.00 0.00 38.78 4.85
5521 7544 4.779819 GCTCTTTGCCAGCGATTG 57.220 55.556 0.00 0.00 35.15 2.67
5522 7545 1.878775 GCTCTTTGCCAGCGATTGT 59.121 52.632 0.00 0.00 35.15 2.71
5523 7546 0.179179 GCTCTTTGCCAGCGATTGTC 60.179 55.000 0.00 0.00 35.15 3.18
5524 7547 1.159285 CTCTTTGCCAGCGATTGTCA 58.841 50.000 0.00 0.00 0.00 3.58
5525 7548 0.874390 TCTTTGCCAGCGATTGTCAC 59.126 50.000 0.00 0.00 0.00 3.67
5526 7549 0.109597 CTTTGCCAGCGATTGTCACC 60.110 55.000 0.00 0.00 0.00 4.02
5527 7550 1.523154 TTTGCCAGCGATTGTCACCC 61.523 55.000 0.00 0.00 0.00 4.61
5528 7551 2.045926 GCCAGCGATTGTCACCCT 60.046 61.111 0.00 0.00 0.00 4.34
5529 7552 1.220749 GCCAGCGATTGTCACCCTA 59.779 57.895 0.00 0.00 0.00 3.53
5530 7553 0.811616 GCCAGCGATTGTCACCCTAG 60.812 60.000 0.00 0.00 0.00 3.02
5531 7554 0.811616 CCAGCGATTGTCACCCTAGC 60.812 60.000 0.00 0.00 0.00 3.42
5532 7555 0.108186 CAGCGATTGTCACCCTAGCA 60.108 55.000 0.00 0.00 0.00 3.49
5533 7556 0.108138 AGCGATTGTCACCCTAGCAC 60.108 55.000 0.00 0.00 0.00 4.40
5534 7557 1.421410 GCGATTGTCACCCTAGCACG 61.421 60.000 0.00 0.00 0.00 5.34
5535 7558 0.108804 CGATTGTCACCCTAGCACGT 60.109 55.000 0.00 0.00 0.00 4.49
5536 7559 1.671850 CGATTGTCACCCTAGCACGTT 60.672 52.381 0.00 0.00 0.00 3.99
5537 7560 2.423577 GATTGTCACCCTAGCACGTTT 58.576 47.619 0.00 0.00 0.00 3.60
5538 7561 2.335316 TTGTCACCCTAGCACGTTTT 57.665 45.000 0.00 0.00 0.00 2.43
5539 7562 1.873698 TGTCACCCTAGCACGTTTTC 58.126 50.000 0.00 0.00 0.00 2.29
5540 7563 1.139256 TGTCACCCTAGCACGTTTTCA 59.861 47.619 0.00 0.00 0.00 2.69
5541 7564 1.798813 GTCACCCTAGCACGTTTTCAG 59.201 52.381 0.00 0.00 0.00 3.02
5542 7565 0.517316 CACCCTAGCACGTTTTCAGC 59.483 55.000 0.00 0.00 0.00 4.26
5543 7566 0.396811 ACCCTAGCACGTTTTCAGCT 59.603 50.000 2.70 2.70 42.14 4.24
5544 7567 0.798776 CCCTAGCACGTTTTCAGCTG 59.201 55.000 7.63 7.63 39.30 4.24
5545 7568 1.608025 CCCTAGCACGTTTTCAGCTGA 60.608 52.381 13.74 13.74 39.30 4.26
5546 7569 2.143122 CCTAGCACGTTTTCAGCTGAA 58.857 47.619 25.16 25.16 39.30 3.02
5547 7570 2.158449 CCTAGCACGTTTTCAGCTGAAG 59.842 50.000 27.02 18.87 39.30 3.02
5548 7571 1.953559 AGCACGTTTTCAGCTGAAGA 58.046 45.000 27.02 21.34 37.20 2.87
5549 7572 2.288666 AGCACGTTTTCAGCTGAAGAA 58.711 42.857 27.02 20.46 37.20 2.52
5550 7573 2.682856 AGCACGTTTTCAGCTGAAGAAA 59.317 40.909 27.02 17.87 37.20 2.52
5551 7574 3.038710 GCACGTTTTCAGCTGAAGAAAG 58.961 45.455 27.02 24.22 36.45 2.62
5552 7575 3.038710 CACGTTTTCAGCTGAAGAAAGC 58.961 45.455 27.02 14.92 43.88 3.51
5553 7576 2.682856 ACGTTTTCAGCTGAAGAAAGCA 59.317 40.909 27.02 10.54 46.08 3.91
5554 7577 3.038710 CGTTTTCAGCTGAAGAAAGCAC 58.961 45.455 27.02 16.53 46.08 4.40
5555 7578 3.375642 GTTTTCAGCTGAAGAAAGCACC 58.624 45.455 27.02 8.08 46.08 5.01
5556 7579 1.229428 TTCAGCTGAAGAAAGCACCG 58.771 50.000 25.16 0.00 46.08 4.94
5557 7580 1.208614 CAGCTGAAGAAAGCACCGC 59.791 57.895 8.42 0.00 46.08 5.68
5558 7581 1.072159 AGCTGAAGAAAGCACCGCT 59.928 52.632 0.00 0.00 46.08 5.52
5559 7582 1.208614 GCTGAAGAAAGCACCGCTG 59.791 57.895 0.00 0.00 43.01 5.18
5560 7583 1.208614 CTGAAGAAAGCACCGCTGC 59.791 57.895 0.00 0.00 44.63 5.25
5561 7584 1.509644 CTGAAGAAAGCACCGCTGCA 61.510 55.000 5.35 0.00 46.97 4.41
5562 7585 1.208614 GAAGAAAGCACCGCTGCAG 59.791 57.895 10.11 10.11 46.97 4.41
5563 7586 2.192608 GAAGAAAGCACCGCTGCAGG 62.193 60.000 17.12 2.55 46.97 4.85
5564 7587 2.965716 AAGAAAGCACCGCTGCAGGT 62.966 55.000 17.12 3.34 46.97 4.00
5565 7588 2.970974 GAAAGCACCGCTGCAGGTC 61.971 63.158 17.12 0.00 46.97 3.85
5566 7589 3.772853 AAAGCACCGCTGCAGGTCA 62.773 57.895 17.12 0.00 46.97 4.02
5567 7590 3.557903 AAGCACCGCTGCAGGTCAT 62.558 57.895 17.12 0.00 46.97 3.06
5568 7591 3.807538 GCACCGCTGCAGGTCATG 61.808 66.667 17.12 2.31 43.89 3.07
5569 7592 3.129502 CACCGCTGCAGGTCATGG 61.130 66.667 17.12 0.00 43.89 3.66
5621 7644 4.065281 CGTCGCCCTCCCTCGTTT 62.065 66.667 0.00 0.00 0.00 3.60
5622 7645 2.434359 GTCGCCCTCCCTCGTTTG 60.434 66.667 0.00 0.00 0.00 2.93
5623 7646 4.388499 TCGCCCTCCCTCGTTTGC 62.388 66.667 0.00 0.00 0.00 3.68
5626 7649 3.330720 CCCTCCCTCGTTTGCCCT 61.331 66.667 0.00 0.00 0.00 5.19
5627 7650 2.269241 CCTCCCTCGTTTGCCCTC 59.731 66.667 0.00 0.00 0.00 4.30
5628 7651 2.592993 CCTCCCTCGTTTGCCCTCA 61.593 63.158 0.00 0.00 0.00 3.86
5629 7652 1.376037 CTCCCTCGTTTGCCCTCAC 60.376 63.158 0.00 0.00 0.00 3.51
5630 7653 2.359975 CCCTCGTTTGCCCTCACC 60.360 66.667 0.00 0.00 0.00 4.02
5631 7654 2.742372 CCTCGTTTGCCCTCACCG 60.742 66.667 0.00 0.00 0.00 4.94
5632 7655 2.030562 CTCGTTTGCCCTCACCGT 59.969 61.111 0.00 0.00 0.00 4.83
5633 7656 2.027625 CTCGTTTGCCCTCACCGTC 61.028 63.158 0.00 0.00 0.00 4.79
5634 7657 3.411351 CGTTTGCCCTCACCGTCG 61.411 66.667 0.00 0.00 0.00 5.12
5635 7658 2.029964 GTTTGCCCTCACCGTCGA 59.970 61.111 0.00 0.00 0.00 4.20
5636 7659 1.375523 GTTTGCCCTCACCGTCGAT 60.376 57.895 0.00 0.00 0.00 3.59
5637 7660 0.108520 GTTTGCCCTCACCGTCGATA 60.109 55.000 0.00 0.00 0.00 2.92
5638 7661 0.174845 TTTGCCCTCACCGTCGATAG 59.825 55.000 0.00 0.00 0.00 2.08
5639 7662 0.968901 TTGCCCTCACCGTCGATAGT 60.969 55.000 0.00 0.00 37.40 2.12
5640 7663 1.359475 GCCCTCACCGTCGATAGTC 59.641 63.158 0.00 0.00 37.40 2.59
5641 7664 1.647629 CCCTCACCGTCGATAGTCG 59.352 63.158 0.00 0.00 46.91 4.18
5642 7665 1.009900 CCTCACCGTCGATAGTCGC 60.010 63.158 0.00 0.00 46.03 5.19
5643 7666 1.009900 CTCACCGTCGATAGTCGCC 60.010 63.158 0.00 0.00 46.03 5.54
5644 7667 2.352001 CACCGTCGATAGTCGCCG 60.352 66.667 0.00 0.00 46.03 6.46
5645 7668 4.247612 ACCGTCGATAGTCGCCGC 62.248 66.667 0.00 0.00 40.09 6.53
5646 7669 4.977126 CCGTCGATAGTCGCCGCC 62.977 72.222 0.00 0.00 40.09 6.13
5647 7670 4.246206 CGTCGATAGTCGCCGCCA 62.246 66.667 0.00 0.00 41.21 5.69
5648 7671 2.335369 GTCGATAGTCGCCGCCAT 59.665 61.111 0.00 0.00 40.21 4.40
5649 7672 1.299926 GTCGATAGTCGCCGCCATT 60.300 57.895 0.00 0.00 40.21 3.16
5650 7673 0.874607 GTCGATAGTCGCCGCCATTT 60.875 55.000 0.00 0.00 40.21 2.32
5651 7674 0.596600 TCGATAGTCGCCGCCATTTC 60.597 55.000 0.00 0.00 40.21 2.17
5652 7675 1.853319 GATAGTCGCCGCCATTTCG 59.147 57.895 0.00 0.00 0.00 3.46
5653 7676 2.159272 GATAGTCGCCGCCATTTCGC 62.159 60.000 0.00 0.00 0.00 4.70
5660 7683 3.576356 CGCCATTTCGCCGCTGAT 61.576 61.111 0.00 0.00 0.00 2.90
5661 7684 2.329339 GCCATTTCGCCGCTGATC 59.671 61.111 0.00 0.00 0.00 2.92
5662 7685 2.472059 GCCATTTCGCCGCTGATCA 61.472 57.895 0.00 0.00 0.00 2.92
5663 7686 1.353103 CCATTTCGCCGCTGATCAC 59.647 57.895 0.00 0.00 0.00 3.06
5664 7687 1.353103 CATTTCGCCGCTGATCACC 59.647 57.895 0.00 0.00 0.00 4.02
5665 7688 2.173669 ATTTCGCCGCTGATCACCG 61.174 57.895 3.34 3.34 0.00 4.94
5670 7693 4.457496 CCGCTGATCACCGCCACT 62.457 66.667 4.84 0.00 0.00 4.00
5671 7694 2.434884 CGCTGATCACCGCCACTT 60.435 61.111 0.00 0.00 0.00 3.16
5672 7695 2.456119 CGCTGATCACCGCCACTTC 61.456 63.158 0.00 0.00 0.00 3.01
5673 7696 1.375908 GCTGATCACCGCCACTTCA 60.376 57.895 0.00 0.00 0.00 3.02
5674 7697 1.639298 GCTGATCACCGCCACTTCAC 61.639 60.000 0.00 0.00 0.00 3.18
5675 7698 1.003839 TGATCACCGCCACTTCACC 60.004 57.895 0.00 0.00 0.00 4.02
5676 7699 1.003839 GATCACCGCCACTTCACCA 60.004 57.895 0.00 0.00 0.00 4.17
5677 7700 0.392998 GATCACCGCCACTTCACCAT 60.393 55.000 0.00 0.00 0.00 3.55
5678 7701 0.392998 ATCACCGCCACTTCACCATC 60.393 55.000 0.00 0.00 0.00 3.51
5679 7702 2.047274 ACCGCCACTTCACCATCG 60.047 61.111 0.00 0.00 0.00 3.84
5680 7703 2.819595 CCGCCACTTCACCATCGG 60.820 66.667 0.00 0.00 0.00 4.18
5681 7704 2.047274 CGCCACTTCACCATCGGT 60.047 61.111 0.00 0.00 35.62 4.69
5682 7705 2.100631 CGCCACTTCACCATCGGTC 61.101 63.158 0.00 0.00 31.02 4.79
5683 7706 1.296715 GCCACTTCACCATCGGTCT 59.703 57.895 0.00 0.00 31.02 3.85
5684 7707 0.741221 GCCACTTCACCATCGGTCTC 60.741 60.000 0.00 0.00 31.02 3.36
5685 7708 0.108138 CCACTTCACCATCGGTCTCC 60.108 60.000 0.00 0.00 31.02 3.71
5696 7719 3.846430 GGTCTCCGCCCTTACCGG 61.846 72.222 0.00 0.00 46.88 5.28
5697 7720 3.073101 GTCTCCGCCCTTACCGGT 61.073 66.667 13.98 13.98 45.71 5.28
5698 7721 3.072468 TCTCCGCCCTTACCGGTG 61.072 66.667 19.93 0.00 45.71 4.94
5701 7724 4.462280 CCGCCCTTACCGGTGGTC 62.462 72.222 19.93 0.00 46.81 4.02
5702 7725 3.697747 CGCCCTTACCGGTGGTCA 61.698 66.667 19.93 0.00 37.09 4.02
5703 7726 2.267961 GCCCTTACCGGTGGTCAG 59.732 66.667 19.93 7.65 37.09 3.51
5704 7727 2.267961 CCCTTACCGGTGGTCAGC 59.732 66.667 19.93 0.00 37.09 4.26
5713 7736 4.101448 GTGGTCAGCGCCTCCCAT 62.101 66.667 2.29 0.00 0.00 4.00
5714 7737 2.364973 TGGTCAGCGCCTCCCATA 60.365 61.111 2.29 0.00 0.00 2.74
5715 7738 2.109181 GGTCAGCGCCTCCCATAC 59.891 66.667 2.29 0.00 0.00 2.39
5716 7739 2.279517 GTCAGCGCCTCCCATACG 60.280 66.667 2.29 0.00 0.00 3.06
5717 7740 2.758327 TCAGCGCCTCCCATACGT 60.758 61.111 2.29 0.00 0.00 3.57
5718 7741 2.186903 CAGCGCCTCCCATACGTT 59.813 61.111 2.29 0.00 0.00 3.99
5719 7742 1.449601 CAGCGCCTCCCATACGTTT 60.450 57.895 2.29 0.00 0.00 3.60
5720 7743 1.153429 AGCGCCTCCCATACGTTTC 60.153 57.895 2.29 0.00 0.00 2.78
5721 7744 1.153429 GCGCCTCCCATACGTTTCT 60.153 57.895 0.00 0.00 0.00 2.52
5722 7745 1.152383 GCGCCTCCCATACGTTTCTC 61.152 60.000 0.00 0.00 0.00 2.87
5723 7746 0.870307 CGCCTCCCATACGTTTCTCG 60.870 60.000 0.00 0.00 46.00 4.04
5732 7755 3.838468 CGTTTCTCGTCGGTCACC 58.162 61.111 0.00 0.00 34.52 4.02
5733 7756 1.008194 CGTTTCTCGTCGGTCACCA 60.008 57.895 0.00 0.00 34.52 4.17
5734 7757 1.273455 CGTTTCTCGTCGGTCACCAC 61.273 60.000 0.00 0.00 34.52 4.16
5735 7758 0.249155 GTTTCTCGTCGGTCACCACA 60.249 55.000 0.00 0.00 0.00 4.17
5736 7759 0.460722 TTTCTCGTCGGTCACCACAA 59.539 50.000 0.00 0.00 0.00 3.33
5737 7760 0.249155 TTCTCGTCGGTCACCACAAC 60.249 55.000 0.00 0.00 0.00 3.32
5738 7761 1.105167 TCTCGTCGGTCACCACAACT 61.105 55.000 0.00 0.00 0.00 3.16
5739 7762 0.594602 CTCGTCGGTCACCACAACTA 59.405 55.000 0.00 0.00 0.00 2.24
5740 7763 0.594602 TCGTCGGTCACCACAACTAG 59.405 55.000 0.00 0.00 0.00 2.57
5741 7764 0.388134 CGTCGGTCACCACAACTAGG 60.388 60.000 0.00 0.00 0.00 3.02
5742 7765 0.037605 GTCGGTCACCACAACTAGGG 60.038 60.000 0.00 0.00 0.00 3.53
5743 7766 0.178955 TCGGTCACCACAACTAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
5744 7767 0.902531 CGGTCACCACAACTAGGGAT 59.097 55.000 0.00 0.00 0.00 3.85
5745 7768 1.405526 CGGTCACCACAACTAGGGATG 60.406 57.143 0.00 0.00 0.00 3.51
5746 7769 1.628846 GGTCACCACAACTAGGGATGT 59.371 52.381 0.00 0.00 0.00 3.06
5747 7770 2.835764 GGTCACCACAACTAGGGATGTA 59.164 50.000 0.00 0.00 0.00 2.29
5748 7771 3.262405 GGTCACCACAACTAGGGATGTAA 59.738 47.826 0.00 0.00 0.00 2.41
5749 7772 4.263156 GGTCACCACAACTAGGGATGTAAA 60.263 45.833 0.00 0.00 0.00 2.01
5750 7773 4.694037 GTCACCACAACTAGGGATGTAAAC 59.306 45.833 0.00 0.00 0.00 2.01
5751 7774 3.682858 CACCACAACTAGGGATGTAAACG 59.317 47.826 0.00 0.00 0.00 3.60
5752 7775 3.267483 CCACAACTAGGGATGTAAACGG 58.733 50.000 0.00 0.00 0.00 4.44
5753 7776 3.055675 CCACAACTAGGGATGTAAACGGA 60.056 47.826 0.00 0.00 0.00 4.69
5754 7777 4.383770 CCACAACTAGGGATGTAAACGGAT 60.384 45.833 0.00 0.00 0.00 4.18
5755 7778 5.183228 CACAACTAGGGATGTAAACGGATT 58.817 41.667 0.00 0.00 0.00 3.01
5756 7779 5.064707 CACAACTAGGGATGTAAACGGATTG 59.935 44.000 0.00 0.00 0.00 2.67
5757 7780 4.417426 ACTAGGGATGTAAACGGATTGG 57.583 45.455 0.00 0.00 0.00 3.16
5758 7781 4.035112 ACTAGGGATGTAAACGGATTGGA 58.965 43.478 0.00 0.00 0.00 3.53
5759 7782 4.658901 ACTAGGGATGTAAACGGATTGGAT 59.341 41.667 0.00 0.00 0.00 3.41
5760 7783 4.519906 AGGGATGTAAACGGATTGGATT 57.480 40.909 0.00 0.00 0.00 3.01
5761 7784 4.207165 AGGGATGTAAACGGATTGGATTG 58.793 43.478 0.00 0.00 0.00 2.67
5762 7785 3.317993 GGGATGTAAACGGATTGGATTGG 59.682 47.826 0.00 0.00 0.00 3.16
5763 7786 4.204012 GGATGTAAACGGATTGGATTGGA 58.796 43.478 0.00 0.00 0.00 3.53
5764 7787 4.827284 GGATGTAAACGGATTGGATTGGAT 59.173 41.667 0.00 0.00 0.00 3.41
5765 7788 5.048713 GGATGTAAACGGATTGGATTGGATC 60.049 44.000 0.00 0.00 0.00 3.36
5766 7789 3.874543 TGTAAACGGATTGGATTGGATCG 59.125 43.478 0.00 0.00 0.00 3.69
5767 7790 1.967319 AACGGATTGGATTGGATCGG 58.033 50.000 0.00 0.00 0.00 4.18
5768 7791 1.128200 ACGGATTGGATTGGATCGGA 58.872 50.000 0.00 0.00 0.00 4.55
5769 7792 1.699634 ACGGATTGGATTGGATCGGAT 59.300 47.619 0.00 0.00 0.00 4.18
5770 7793 2.903784 ACGGATTGGATTGGATCGGATA 59.096 45.455 0.00 0.00 0.00 2.59
5771 7794 3.326588 ACGGATTGGATTGGATCGGATAA 59.673 43.478 0.00 0.00 0.00 1.75
5772 7795 4.019321 ACGGATTGGATTGGATCGGATAAT 60.019 41.667 0.00 0.00 0.00 1.28
5773 7796 4.333649 CGGATTGGATTGGATCGGATAATG 59.666 45.833 0.00 0.00 0.00 1.90
5774 7797 5.256474 GGATTGGATTGGATCGGATAATGT 58.744 41.667 0.00 0.00 0.00 2.71
5775 7798 5.355350 GGATTGGATTGGATCGGATAATGTC 59.645 44.000 0.00 0.00 0.00 3.06
5776 7799 5.567037 TTGGATTGGATCGGATAATGTCT 57.433 39.130 0.00 0.00 0.00 3.41
5777 7800 5.567037 TGGATTGGATCGGATAATGTCTT 57.433 39.130 0.00 0.00 0.00 3.01
5778 7801 5.940617 TGGATTGGATCGGATAATGTCTTT 58.059 37.500 0.00 0.00 0.00 2.52
5779 7802 7.073457 TGGATTGGATCGGATAATGTCTTTA 57.927 36.000 0.00 0.00 0.00 1.85
5780 7803 6.934645 TGGATTGGATCGGATAATGTCTTTAC 59.065 38.462 0.00 0.00 0.00 2.01
5781 7804 6.371825 GGATTGGATCGGATAATGTCTTTACC 59.628 42.308 0.00 0.00 0.00 2.85
5782 7805 5.880164 TGGATCGGATAATGTCTTTACCA 57.120 39.130 0.00 0.00 0.00 3.25
5783 7806 6.433847 TGGATCGGATAATGTCTTTACCAT 57.566 37.500 0.00 0.00 0.00 3.55
5784 7807 7.547697 TGGATCGGATAATGTCTTTACCATA 57.452 36.000 0.00 0.00 0.00 2.74
5785 7808 8.146053 TGGATCGGATAATGTCTTTACCATAT 57.854 34.615 0.00 0.00 0.00 1.78
5786 7809 8.258007 TGGATCGGATAATGTCTTTACCATATC 58.742 37.037 0.00 0.00 0.00 1.63
5787 7810 7.711339 GGATCGGATAATGTCTTTACCATATCC 59.289 40.741 0.00 0.00 38.13 2.59
5788 7811 7.792364 TCGGATAATGTCTTTACCATATCCT 57.208 36.000 7.73 0.00 38.72 3.24
5789 7812 8.202461 TCGGATAATGTCTTTACCATATCCTT 57.798 34.615 7.73 0.00 38.72 3.36
5790 7813 8.656806 TCGGATAATGTCTTTACCATATCCTTT 58.343 33.333 7.73 0.00 38.72 3.11
5791 7814 9.938280 CGGATAATGTCTTTACCATATCCTTTA 57.062 33.333 7.73 0.00 38.72 1.85
5795 7818 8.747538 AATGTCTTTACCATATCCTTTACCAC 57.252 34.615 0.00 0.00 0.00 4.16
5796 7819 7.260387 TGTCTTTACCATATCCTTTACCACA 57.740 36.000 0.00 0.00 0.00 4.17
5797 7820 7.867921 TGTCTTTACCATATCCTTTACCACAT 58.132 34.615 0.00 0.00 0.00 3.21
5798 7821 8.333235 TGTCTTTACCATATCCTTTACCACATT 58.667 33.333 0.00 0.00 0.00 2.71
5799 7822 9.185680 GTCTTTACCATATCCTTTACCACATTT 57.814 33.333 0.00 0.00 0.00 2.32
5800 7823 9.762381 TCTTTACCATATCCTTTACCACATTTT 57.238 29.630 0.00 0.00 0.00 1.82
5818 7841 0.793861 TTTTTGTCGGATTCGGAGCG 59.206 50.000 0.00 0.00 36.95 5.03
5819 7842 1.017177 TTTTGTCGGATTCGGAGCGG 61.017 55.000 0.00 0.00 36.95 5.52
5820 7843 1.879737 TTTGTCGGATTCGGAGCGGA 61.880 55.000 0.00 0.00 36.95 5.54
5821 7844 1.672854 TTGTCGGATTCGGAGCGGAT 61.673 55.000 0.00 0.00 36.95 4.18
5822 7845 1.371881 GTCGGATTCGGAGCGGATC 60.372 63.158 0.00 0.00 40.77 3.36
5823 7846 2.429236 CGGATTCGGAGCGGATCG 60.429 66.667 0.00 0.00 42.25 3.69
5824 7847 2.049063 GGATTCGGAGCGGATCGG 60.049 66.667 0.00 0.00 42.25 4.18
5825 7848 2.561956 GGATTCGGAGCGGATCGGA 61.562 63.158 4.16 0.00 42.25 4.55
5826 7849 1.587054 GATTCGGAGCGGATCGGAT 59.413 57.895 4.16 0.00 37.15 4.18
5827 7850 0.809385 GATTCGGAGCGGATCGGATA 59.191 55.000 4.16 0.00 37.15 2.59
5828 7851 1.201647 GATTCGGAGCGGATCGGATAA 59.798 52.381 4.16 0.00 37.15 1.75
5829 7852 1.254026 TTCGGAGCGGATCGGATAAT 58.746 50.000 4.16 0.00 37.15 1.28
5830 7853 0.526211 TCGGAGCGGATCGGATAATG 59.474 55.000 4.16 0.00 32.72 1.90
5831 7854 0.526211 CGGAGCGGATCGGATAATGA 59.474 55.000 4.16 0.00 0.00 2.57
5832 7855 1.732732 CGGAGCGGATCGGATAATGAC 60.733 57.143 4.16 0.00 0.00 3.06
5833 7856 1.404315 GGAGCGGATCGGATAATGACC 60.404 57.143 4.16 0.00 0.00 4.02
5840 7863 2.445274 CGGATAATGACCGGATGCG 58.555 57.895 9.46 3.53 45.65 4.73
5841 7864 1.014044 CGGATAATGACCGGATGCGG 61.014 60.000 25.41 25.41 45.65 5.69
5842 7865 0.320374 GGATAATGACCGGATGCGGA 59.680 55.000 33.63 11.63 0.00 5.54
5843 7866 1.066143 GGATAATGACCGGATGCGGAT 60.066 52.381 33.63 14.90 0.00 4.18
5844 7867 2.615493 GGATAATGACCGGATGCGGATT 60.615 50.000 33.63 23.10 0.00 3.01
5845 7868 2.163818 TAATGACCGGATGCGGATTC 57.836 50.000 33.63 20.39 0.00 2.52
5846 7869 0.880278 AATGACCGGATGCGGATTCG 60.880 55.000 33.63 11.13 39.81 3.34
5847 7870 1.744320 ATGACCGGATGCGGATTCGA 61.744 55.000 33.63 11.12 39.00 3.71
5848 7871 1.227147 GACCGGATGCGGATTCGAA 60.227 57.895 33.63 0.00 39.00 3.71
5849 7872 0.600255 GACCGGATGCGGATTCGAAT 60.600 55.000 33.63 11.20 37.35 3.34
5850 7873 0.677288 ACCGGATGCGGATTCGAATA 59.323 50.000 33.63 0.00 34.18 1.75
5851 7874 1.068474 CCGGATGCGGATTCGAATAC 58.932 55.000 22.73 10.95 34.18 1.89
5853 7876 1.068474 GGATGCGGATTCGAATACGG 58.932 55.000 36.44 21.92 42.91 4.02
5855 7878 2.743636 ATGCGGATTCGAATACGGAT 57.256 45.000 35.35 35.35 46.70 4.18
5856 7879 2.519377 TGCGGATTCGAATACGGATT 57.481 45.000 36.44 4.81 42.91 3.01
5857 7880 3.646611 TGCGGATTCGAATACGGATTA 57.353 42.857 36.44 10.98 42.91 1.75
5858 7881 4.182693 TGCGGATTCGAATACGGATTAT 57.817 40.909 36.44 3.23 42.91 1.28
5859 7882 5.313520 TGCGGATTCGAATACGGATTATA 57.686 39.130 36.44 5.27 42.91 0.98
5860 7883 5.898174 TGCGGATTCGAATACGGATTATAT 58.102 37.500 36.44 1.88 42.91 0.86
5861 7884 5.975344 TGCGGATTCGAATACGGATTATATC 59.025 40.000 36.44 21.12 42.91 1.63
5862 7885 5.115171 GCGGATTCGAATACGGATTATATCG 59.885 44.000 36.44 11.65 42.91 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.885871 GTAGCTTTGGGCCTTGCTG 59.114 57.895 22.04 4.09 43.05 4.41
9 10 0.035725 ACCTAACGTAGCTTTGGGCC 60.036 55.000 0.00 0.00 43.05 5.80
13 14 2.000447 GGCTGACCTAACGTAGCTTTG 59.000 52.381 5.78 0.00 36.45 2.77
21 22 1.352156 GCGAGTTGGCTGACCTAACG 61.352 60.000 0.00 0.00 36.63 3.18
31 32 1.019805 GGGTTAGAGTGCGAGTTGGC 61.020 60.000 0.00 0.00 0.00 4.52
74 75 3.470888 CCACAGCGGTAGGGGGAG 61.471 72.222 0.00 0.00 0.00 4.30
134 135 1.452108 CGGAGCTCCAAACCCATCC 60.452 63.158 31.67 2.16 35.14 3.51
151 152 5.116180 TCATTAAGCATCCTTCCTTGTACG 58.884 41.667 0.00 0.00 32.47 3.67
181 182 3.795688 ACAGATGGAGAGGCAAGAAAA 57.204 42.857 0.00 0.00 0.00 2.29
182 183 4.774124 CATACAGATGGAGAGGCAAGAAA 58.226 43.478 0.00 0.00 0.00 2.52
184 185 2.103771 GCATACAGATGGAGAGGCAAGA 59.896 50.000 0.00 0.00 33.26 3.02
195 196 2.302952 CGACCGCCGCATACAGATG 61.303 63.158 0.00 0.00 36.02 2.90
198 199 2.954868 GTCGACCGCCGCATACAG 60.955 66.667 3.51 0.00 38.37 2.74
216 217 2.529389 AGGAGGGTTGGAGGCGTT 60.529 61.111 0.00 0.00 0.00 4.84
240 241 2.435372 AGAGGTGGCAACTTTTGTCA 57.565 45.000 6.46 0.00 44.14 3.58
242 243 2.583143 GGTAGAGGTGGCAACTTTTGT 58.417 47.619 6.46 0.00 37.61 2.83
275 276 1.813753 CGGATACACAACCTGCCGG 60.814 63.158 0.00 0.00 35.42 6.13
278 279 0.958382 TTGCCGGATACACAACCTGC 60.958 55.000 5.05 0.00 37.03 4.85
279 280 1.086696 CTTGCCGGATACACAACCTG 58.913 55.000 5.05 0.00 0.00 4.00
281 282 1.654023 GGCTTGCCGGATACACAACC 61.654 60.000 5.05 0.31 0.00 3.77
293 294 2.417097 GTGTTGTGGTGGCTTGCC 59.583 61.111 4.43 4.43 0.00 4.52
310 311 1.352156 GAAGACAACGCACGCTAGGG 61.352 60.000 5.05 5.05 0.00 3.53
312 313 0.710567 CTGAAGACAACGCACGCTAG 59.289 55.000 0.00 0.00 0.00 3.42
316 317 2.168621 CGCTGAAGACAACGCACG 59.831 61.111 0.00 0.00 0.00 5.34
328 329 0.037326 GAAGTGATGGTGTCCGCTGA 60.037 55.000 0.00 0.00 0.00 4.26
330 331 1.478510 CTAGAAGTGATGGTGTCCGCT 59.521 52.381 0.00 0.00 0.00 5.52
333 334 1.134371 GGCCTAGAAGTGATGGTGTCC 60.134 57.143 0.00 0.00 0.00 4.02
336 337 0.181350 GGGGCCTAGAAGTGATGGTG 59.819 60.000 0.84 0.00 0.00 4.17
341 342 0.040058 TGTACGGGGCCTAGAAGTGA 59.960 55.000 0.84 0.00 0.00 3.41
344 345 1.120530 ACATGTACGGGGCCTAGAAG 58.879 55.000 0.84 0.00 0.00 2.85
347 348 1.120530 AGAACATGTACGGGGCCTAG 58.879 55.000 0.84 0.00 0.00 3.02
356 357 3.873952 GCATCCCTGAGAAGAACATGTAC 59.126 47.826 0.00 0.00 0.00 2.90
357 358 3.776969 AGCATCCCTGAGAAGAACATGTA 59.223 43.478 0.00 0.00 0.00 2.29
365 366 5.008980 AGAAAAGAAAGCATCCCTGAGAAG 58.991 41.667 0.00 0.00 0.00 2.85
414 415 7.812191 GGCTTGACAACAAATATATGACAAACA 59.188 33.333 0.00 0.00 35.49 2.83
419 420 7.088589 ACAGGCTTGACAACAAATATATGAC 57.911 36.000 1.40 0.00 35.49 3.06
433 434 8.685838 TGGGTTTTTATATATACAGGCTTGAC 57.314 34.615 1.40 0.00 0.00 3.18
437 438 9.520515 CAAGATGGGTTTTTATATATACAGGCT 57.479 33.333 0.00 0.00 0.00 4.58
439 440 9.807921 ACCAAGATGGGTTTTTATATATACAGG 57.192 33.333 0.87 0.00 43.37 4.00
464 465 3.545366 AAGAAGCGGAATAGAGGGAAC 57.455 47.619 0.00 0.00 0.00 3.62
473 474 2.715046 TGAGCATCAAAGAAGCGGAAT 58.285 42.857 0.00 0.00 45.97 3.01
474 475 2.183478 TGAGCATCAAAGAAGCGGAA 57.817 45.000 0.00 0.00 45.97 4.30
585 587 0.892755 TAGCAATTCGTCGGACAGGT 59.107 50.000 9.10 0.96 0.00 4.00
771 802 1.674764 ATCGGGCTCTCTGTGCTCTG 61.675 60.000 0.00 0.00 0.00 3.35
778 809 1.748493 GCCTATCTATCGGGCTCTCTG 59.252 57.143 0.00 0.00 42.31 3.35
1697 1728 1.059369 CCTTCAAGCGCGTTCATCG 59.941 57.895 8.43 0.00 43.12 3.84
2385 2416 4.766891 CAGTCCTTTTCCTTGCCATTTCTA 59.233 41.667 0.00 0.00 0.00 2.10
2429 2460 1.334869 CTTTGCGCCTATGTCCATTCC 59.665 52.381 4.18 0.00 0.00 3.01
2907 4874 5.547465 TGCCTAACCAATGATAAGGATACG 58.453 41.667 0.00 0.00 46.39 3.06
2983 4950 4.819630 TGTAGTAAAACTGCCAACAAGGAG 59.180 41.667 0.00 0.00 41.22 3.69
3134 5101 3.180980 CACTTAAGCATGCGCATAATTGC 59.819 43.478 24.84 23.63 45.78 3.56
3135 5102 4.353737 ACACTTAAGCATGCGCATAATTG 58.646 39.130 24.84 18.96 42.27 2.32
3136 5103 4.637483 ACACTTAAGCATGCGCATAATT 57.363 36.364 24.84 21.52 42.27 1.40
3137 5104 5.749596 TTACACTTAAGCATGCGCATAAT 57.250 34.783 24.84 14.35 42.27 1.28
3138 5105 5.749596 ATTACACTTAAGCATGCGCATAA 57.250 34.783 24.84 12.91 42.27 1.90
3139 5106 5.749596 AATTACACTTAAGCATGCGCATA 57.250 34.783 24.84 4.13 42.27 3.14
3140 5107 4.637483 AATTACACTTAAGCATGCGCAT 57.363 36.364 19.28 19.28 42.27 4.73
3141 5108 5.509771 CATAATTACACTTAAGCATGCGCA 58.490 37.500 14.96 14.96 42.27 6.09
3142 5109 4.379793 GCATAATTACACTTAAGCATGCGC 59.620 41.667 13.01 0.00 32.72 6.09
3143 5110 5.396362 GTGCATAATTACACTTAAGCATGCG 59.604 40.000 13.01 0.00 39.24 4.73
3144 5111 6.264832 TGTGCATAATTACACTTAAGCATGC 58.735 36.000 10.51 10.51 37.56 4.06
3145 5112 8.686397 TTTGTGCATAATTACACTTAAGCATG 57.314 30.769 1.29 0.00 37.56 4.06
3146 5113 9.520204 GATTTGTGCATAATTACACTTAAGCAT 57.480 29.630 1.29 0.00 37.56 3.79
3147 5114 8.518702 TGATTTGTGCATAATTACACTTAAGCA 58.481 29.630 1.29 7.61 37.68 3.91
3148 5115 8.909708 TGATTTGTGCATAATTACACTTAAGC 57.090 30.769 1.29 5.79 37.68 3.09
3150 5117 9.352784 GCTTGATTTGTGCATAATTACACTTAA 57.647 29.630 0.00 3.63 37.68 1.85
3151 5118 7.696035 CGCTTGATTTGTGCATAATTACACTTA 59.304 33.333 0.00 0.00 37.68 2.24
3152 5119 6.527722 CGCTTGATTTGTGCATAATTACACTT 59.472 34.615 0.00 0.00 37.68 3.16
3153 5120 6.029607 CGCTTGATTTGTGCATAATTACACT 58.970 36.000 0.00 0.00 37.68 3.55
3154 5121 5.275881 GCGCTTGATTTGTGCATAATTACAC 60.276 40.000 0.00 0.41 40.28 2.90
3155 5122 4.797868 GCGCTTGATTTGTGCATAATTACA 59.202 37.500 0.00 0.00 40.28 2.41
3156 5123 4.797868 TGCGCTTGATTTGTGCATAATTAC 59.202 37.500 9.73 0.00 44.53 1.89
3157 5124 4.991472 TGCGCTTGATTTGTGCATAATTA 58.009 34.783 9.73 0.00 44.53 1.40
3158 5125 3.847542 TGCGCTTGATTTGTGCATAATT 58.152 36.364 9.73 0.00 44.53 1.40
3159 5126 3.507103 TGCGCTTGATTTGTGCATAAT 57.493 38.095 9.73 0.00 44.53 1.28
3164 5131 1.700523 TGATTGCGCTTGATTTGTGC 58.299 45.000 9.73 0.00 40.87 4.57
3165 5132 3.120616 CACTTGATTGCGCTTGATTTGTG 59.879 43.478 9.73 6.25 0.00 3.33
3169 5136 1.986698 GCACTTGATTGCGCTTGATT 58.013 45.000 9.73 0.00 31.51 2.57
3182 5149 5.156355 CAATAGCAAAACACCTAGCACTTG 58.844 41.667 0.00 0.00 0.00 3.16
3340 5307 1.160137 CAGGCCAGAAGAGGAAAACG 58.840 55.000 5.01 0.00 0.00 3.60
3456 5424 7.206687 AGCAAACCAAGAAACAAATAAATCGA 58.793 30.769 0.00 0.00 0.00 3.59
3457 5425 7.406799 AGCAAACCAAGAAACAAATAAATCG 57.593 32.000 0.00 0.00 0.00 3.34
3675 5643 6.581388 TCAGGAAAGGAAACAGATATCCAT 57.419 37.500 0.00 0.00 38.23 3.41
3681 5649 6.183360 CGCATTTATCAGGAAAGGAAACAGAT 60.183 38.462 0.00 0.00 0.00 2.90
3755 5723 1.686355 ATGAAGGTGCGTGGTTTTCA 58.314 45.000 0.00 0.00 32.90 2.69
4041 6009 6.131972 AGGAATCCATTGAGTCAAAGAGAA 57.868 37.500 10.14 0.00 37.33 2.87
4042 6010 5.768980 AGGAATCCATTGAGTCAAAGAGA 57.231 39.130 10.14 7.42 37.33 3.10
4198 6172 4.640771 TTCTTTACATGAGGCTGGAGTT 57.359 40.909 0.00 0.00 0.00 3.01
4214 6188 4.228210 TCCAGAGCCAACATAGGATTCTTT 59.772 41.667 0.00 0.00 0.00 2.52
4733 6707 6.639632 AATATAACCTAAGACGCGGTTCTA 57.360 37.500 12.47 1.18 42.27 2.10
4883 6857 2.029739 TCTCGACATTCGCCACTTGTTA 60.030 45.455 0.00 0.00 40.21 2.41
4892 6869 1.529438 TGGTTGTTTCTCGACATTCGC 59.471 47.619 0.00 0.00 40.21 4.70
4944 6921 7.419204 TGGGTTAAACGAAAGAATGTTAACAG 58.581 34.615 14.65 0.90 0.00 3.16
5036 7013 1.277842 TGGCTCTGACGGCTCAATAAA 59.722 47.619 0.00 0.00 0.00 1.40
5075 7091 5.102783 ACCATTACCCTCCTAACCATCTCTA 60.103 44.000 0.00 0.00 0.00 2.43
5105 7121 2.572104 AGGTTTGATCCCTAGCGAACTT 59.428 45.455 0.00 0.00 35.97 2.66
5188 7211 0.249073 GCACACCTCGCTATCGATGT 60.249 55.000 8.54 0.00 44.56 3.06
5189 7212 0.031314 AGCACACCTCGCTATCGATG 59.969 55.000 8.54 0.00 44.56 3.84
5190 7213 0.312416 GAGCACACCTCGCTATCGAT 59.688 55.000 2.16 2.16 44.56 3.59
5199 7222 3.516615 GACACTTCTATGAGCACACCTC 58.483 50.000 0.00 0.00 41.15 3.85
5200 7223 2.234908 GGACACTTCTATGAGCACACCT 59.765 50.000 0.00 0.00 0.00 4.00
5201 7224 2.234908 AGGACACTTCTATGAGCACACC 59.765 50.000 0.00 0.00 0.00 4.16
5202 7225 3.194542 AGAGGACACTTCTATGAGCACAC 59.805 47.826 0.00 0.00 0.00 3.82
5203 7226 3.435275 AGAGGACACTTCTATGAGCACA 58.565 45.455 0.00 0.00 0.00 4.57
5204 7227 5.451242 CCTTAGAGGACACTTCTATGAGCAC 60.451 48.000 0.00 0.00 37.67 4.40
5205 7228 4.646945 CCTTAGAGGACACTTCTATGAGCA 59.353 45.833 0.00 0.00 37.67 4.26
5206 7229 4.647399 ACCTTAGAGGACACTTCTATGAGC 59.353 45.833 0.07 0.00 37.67 4.26
5207 7230 5.654650 ACACCTTAGAGGACACTTCTATGAG 59.345 44.000 0.07 0.00 37.67 2.90
5208 7231 5.419155 CACACCTTAGAGGACACTTCTATGA 59.581 44.000 0.07 0.00 37.67 2.15
5209 7232 5.655488 CACACCTTAGAGGACACTTCTATG 58.345 45.833 0.07 0.00 37.67 2.23
5210 7233 4.160626 GCACACCTTAGAGGACACTTCTAT 59.839 45.833 0.07 0.00 37.67 1.98
5211 7234 3.510360 GCACACCTTAGAGGACACTTCTA 59.490 47.826 0.07 0.00 37.67 2.10
5212 7235 2.300437 GCACACCTTAGAGGACACTTCT 59.700 50.000 0.07 0.00 37.67 2.85
5213 7236 2.300437 AGCACACCTTAGAGGACACTTC 59.700 50.000 0.07 0.00 37.67 3.01
5214 7237 2.300437 GAGCACACCTTAGAGGACACTT 59.700 50.000 0.07 0.00 37.67 3.16
5215 7238 1.896465 GAGCACACCTTAGAGGACACT 59.104 52.381 0.07 0.00 37.67 3.55
5216 7239 1.618837 TGAGCACACCTTAGAGGACAC 59.381 52.381 0.07 0.00 37.67 3.67
5217 7240 2.009681 TGAGCACACCTTAGAGGACA 57.990 50.000 0.07 0.00 37.67 4.02
5218 7241 3.954904 TCTATGAGCACACCTTAGAGGAC 59.045 47.826 0.07 0.00 37.67 3.85
5219 7242 4.251103 TCTATGAGCACACCTTAGAGGA 57.749 45.455 0.07 0.00 37.67 3.71
5220 7243 4.404073 ACTTCTATGAGCACACCTTAGAGG 59.596 45.833 2.34 2.34 42.49 3.69
5221 7244 5.590530 ACTTCTATGAGCACACCTTAGAG 57.409 43.478 0.00 0.00 0.00 2.43
5222 7245 7.661536 AATACTTCTATGAGCACACCTTAGA 57.338 36.000 0.00 0.00 0.00 2.10
5223 7246 7.981789 TCAAATACTTCTATGAGCACACCTTAG 59.018 37.037 0.00 0.00 0.00 2.18
5224 7247 7.847096 TCAAATACTTCTATGAGCACACCTTA 58.153 34.615 0.00 0.00 0.00 2.69
5253 7276 9.666626 GTATGCATCTACGTATCATAATCCTAC 57.333 37.037 0.19 0.00 0.00 3.18
5306 7329 3.243434 ACAGACACTCTCAAACACGTAGG 60.243 47.826 0.00 0.00 0.00 3.18
5336 7359 3.569701 GTGGCCTCTTTTTCAGAATCACA 59.430 43.478 3.32 0.00 31.29 3.58
5340 7363 7.486407 AATAATGTGGCCTCTTTTTCAGAAT 57.514 32.000 3.32 0.00 0.00 2.40
5408 7431 3.376918 GAGTGCTGCCCTTTGCCC 61.377 66.667 0.00 0.00 40.16 5.36
5409 7432 2.282745 AGAGTGCTGCCCTTTGCC 60.283 61.111 0.00 0.00 40.16 4.52
5410 7433 2.960170 CAGAGTGCTGCCCTTTGC 59.040 61.111 0.00 0.00 41.77 3.68
5444 7467 1.395826 TTGGACCGGCCCAAAGTTTG 61.396 55.000 21.15 8.73 42.75 2.93
5445 7468 1.075896 TTGGACCGGCCCAAAGTTT 60.076 52.632 21.15 0.00 42.75 2.66
5446 7469 1.830847 GTTGGACCGGCCCAAAGTT 60.831 57.895 25.05 0.00 46.68 2.66
5447 7470 2.203437 GTTGGACCGGCCCAAAGT 60.203 61.111 25.05 0.00 46.68 2.66
5448 7471 2.989253 GGTTGGACCGGCCCAAAG 60.989 66.667 25.05 0.00 46.68 2.77
5449 7472 4.607025 GGGTTGGACCGGCCCAAA 62.607 66.667 25.05 5.66 46.68 3.28
5461 7484 1.376609 GCATCTAACGGCCAGGGTTG 61.377 60.000 2.24 0.00 0.00 3.77
5462 7485 1.077716 GCATCTAACGGCCAGGGTT 60.078 57.895 2.24 0.93 0.00 4.11
5463 7486 2.590092 GCATCTAACGGCCAGGGT 59.410 61.111 2.24 0.00 0.00 4.34
5464 7487 2.588877 CGCATCTAACGGCCAGGG 60.589 66.667 2.24 0.00 0.00 4.45
5465 7488 3.272334 GCGCATCTAACGGCCAGG 61.272 66.667 0.30 0.00 0.00 4.45
5483 7506 3.916392 GATCCGACGGCTATGCGGG 62.916 68.421 9.66 0.00 44.87 6.13
5484 7507 2.430921 GATCCGACGGCTATGCGG 60.431 66.667 9.66 0.00 46.08 5.69
5485 7508 2.016704 GTGATCCGACGGCTATGCG 61.017 63.158 9.66 0.00 0.00 4.73
5486 7509 2.016704 CGTGATCCGACGGCTATGC 61.017 63.158 9.66 0.00 39.56 3.14
5487 7510 2.016704 GCGTGATCCGACGGCTATG 61.017 63.158 9.66 4.45 39.81 2.23
5488 7511 2.131294 GAGCGTGATCCGACGGCTAT 62.131 60.000 9.66 0.00 39.81 2.97
5489 7512 2.827190 AGCGTGATCCGACGGCTA 60.827 61.111 9.66 0.00 39.81 3.93
5490 7513 4.194720 GAGCGTGATCCGACGGCT 62.195 66.667 9.66 0.00 39.81 5.52
5491 7514 3.701604 AAGAGCGTGATCCGACGGC 62.702 63.158 9.66 0.00 39.81 5.68
5492 7515 1.153823 AAAGAGCGTGATCCGACGG 60.154 57.895 7.84 7.84 39.81 4.79
5493 7516 1.991430 CAAAGAGCGTGATCCGACG 59.009 57.895 7.64 4.66 42.42 5.12
5494 7517 1.710339 GCAAAGAGCGTGATCCGAC 59.290 57.895 7.64 1.83 39.56 4.79
5495 7518 4.185413 GCAAAGAGCGTGATCCGA 57.815 55.556 7.64 0.00 39.56 4.55
5504 7527 0.179179 GACAATCGCTGGCAAAGAGC 60.179 55.000 0.00 0.00 44.65 4.09
5505 7528 1.159285 TGACAATCGCTGGCAAAGAG 58.841 50.000 0.00 0.00 41.45 2.85
5506 7529 3.320823 TGACAATCGCTGGCAAAGA 57.679 47.368 0.00 0.00 41.45 2.52
5510 7533 1.549243 TAGGGTGACAATCGCTGGCA 61.549 55.000 0.00 0.00 42.51 4.92
5511 7534 0.811616 CTAGGGTGACAATCGCTGGC 60.812 60.000 0.00 0.00 0.00 4.85
5512 7535 0.811616 GCTAGGGTGACAATCGCTGG 60.812 60.000 0.00 0.00 0.00 4.85
5513 7536 0.108186 TGCTAGGGTGACAATCGCTG 60.108 55.000 0.00 0.00 0.00 5.18
5514 7537 0.108138 GTGCTAGGGTGACAATCGCT 60.108 55.000 0.00 0.00 0.00 4.93
5515 7538 1.421410 CGTGCTAGGGTGACAATCGC 61.421 60.000 0.00 0.00 0.00 4.58
5516 7539 0.108804 ACGTGCTAGGGTGACAATCG 60.109 55.000 0.00 0.00 0.00 3.34
5517 7540 2.094762 AACGTGCTAGGGTGACAATC 57.905 50.000 0.00 0.00 0.00 2.67
5518 7541 2.561478 AAACGTGCTAGGGTGACAAT 57.439 45.000 0.00 0.00 0.00 2.71
5519 7542 2.215196 GAAAACGTGCTAGGGTGACAA 58.785 47.619 0.00 0.00 0.00 3.18
5520 7543 1.139256 TGAAAACGTGCTAGGGTGACA 59.861 47.619 0.00 0.00 0.00 3.58
5521 7544 1.798813 CTGAAAACGTGCTAGGGTGAC 59.201 52.381 0.00 0.00 0.00 3.67
5522 7545 1.876416 GCTGAAAACGTGCTAGGGTGA 60.876 52.381 0.00 0.00 0.00 4.02
5523 7546 0.517316 GCTGAAAACGTGCTAGGGTG 59.483 55.000 0.00 0.00 0.00 4.61
5524 7547 0.396811 AGCTGAAAACGTGCTAGGGT 59.603 50.000 0.00 0.00 35.05 4.34
5525 7548 0.798776 CAGCTGAAAACGTGCTAGGG 59.201 55.000 8.42 0.00 35.05 3.53
5526 7549 1.795768 TCAGCTGAAAACGTGCTAGG 58.204 50.000 15.67 0.00 35.05 3.02
5527 7550 3.059884 TCTTCAGCTGAAAACGTGCTAG 58.940 45.455 28.16 14.31 35.05 3.42
5528 7551 3.106242 TCTTCAGCTGAAAACGTGCTA 57.894 42.857 28.16 4.72 35.05 3.49
5529 7552 1.953559 TCTTCAGCTGAAAACGTGCT 58.046 45.000 28.16 0.00 37.56 4.40
5530 7553 2.755836 TTCTTCAGCTGAAAACGTGC 57.244 45.000 28.16 0.00 33.07 5.34
5531 7554 3.038710 GCTTTCTTCAGCTGAAAACGTG 58.961 45.455 28.16 16.93 36.79 4.49
5532 7555 2.682856 TGCTTTCTTCAGCTGAAAACGT 59.317 40.909 28.16 0.00 40.79 3.99
5533 7556 3.038710 GTGCTTTCTTCAGCTGAAAACG 58.961 45.455 28.16 21.02 40.79 3.60
5534 7557 3.375642 GGTGCTTTCTTCAGCTGAAAAC 58.624 45.455 28.16 18.01 40.79 2.43
5535 7558 2.033299 CGGTGCTTTCTTCAGCTGAAAA 59.967 45.455 28.16 19.55 40.79 2.29
5536 7559 1.603802 CGGTGCTTTCTTCAGCTGAAA 59.396 47.619 28.16 16.82 40.79 2.69
5537 7560 1.229428 CGGTGCTTTCTTCAGCTGAA 58.771 50.000 26.87 26.87 40.79 3.02
5538 7561 1.230635 GCGGTGCTTTCTTCAGCTGA 61.231 55.000 13.74 13.74 40.79 4.26
5539 7562 1.208614 GCGGTGCTTTCTTCAGCTG 59.791 57.895 7.63 7.63 40.79 4.24
5540 7563 1.072159 AGCGGTGCTTTCTTCAGCT 59.928 52.632 0.00 0.00 40.79 4.24
5541 7564 1.208614 CAGCGGTGCTTTCTTCAGC 59.791 57.895 0.00 0.00 36.40 4.26
5552 7575 3.129502 CCATGACCTGCAGCGGTG 61.130 66.667 10.98 10.98 37.42 4.94
5604 7627 4.065281 AAACGAGGGAGGGCGACG 62.065 66.667 0.00 0.00 0.00 5.12
5605 7628 2.434359 CAAACGAGGGAGGGCGAC 60.434 66.667 0.00 0.00 0.00 5.19
5606 7629 4.388499 GCAAACGAGGGAGGGCGA 62.388 66.667 0.00 0.00 0.00 5.54
5609 7632 3.330720 AGGGCAAACGAGGGAGGG 61.331 66.667 0.00 0.00 0.00 4.30
5610 7633 2.269241 GAGGGCAAACGAGGGAGG 59.731 66.667 0.00 0.00 0.00 4.30
5611 7634 1.376037 GTGAGGGCAAACGAGGGAG 60.376 63.158 0.00 0.00 0.00 4.30
5612 7635 2.747686 GTGAGGGCAAACGAGGGA 59.252 61.111 0.00 0.00 0.00 4.20
5613 7636 2.359975 GGTGAGGGCAAACGAGGG 60.360 66.667 0.00 0.00 0.00 4.30
5614 7637 2.742372 CGGTGAGGGCAAACGAGG 60.742 66.667 0.00 0.00 0.00 4.63
5615 7638 2.027625 GACGGTGAGGGCAAACGAG 61.028 63.158 0.00 0.00 32.85 4.18
5616 7639 2.029964 GACGGTGAGGGCAAACGA 59.970 61.111 0.00 0.00 32.85 3.85
5617 7640 3.411351 CGACGGTGAGGGCAAACG 61.411 66.667 0.00 0.00 34.18 3.60
5618 7641 0.108520 TATCGACGGTGAGGGCAAAC 60.109 55.000 0.00 0.00 0.00 2.93
5619 7642 0.174845 CTATCGACGGTGAGGGCAAA 59.825 55.000 0.00 0.00 0.00 3.68
5620 7643 0.968901 ACTATCGACGGTGAGGGCAA 60.969 55.000 0.00 0.00 0.00 4.52
5621 7644 1.379443 ACTATCGACGGTGAGGGCA 60.379 57.895 0.00 0.00 0.00 5.36
5622 7645 1.359475 GACTATCGACGGTGAGGGC 59.641 63.158 0.00 0.00 0.00 5.19
5623 7646 1.647629 CGACTATCGACGGTGAGGG 59.352 63.158 0.00 0.00 43.74 4.30
5624 7647 1.009900 GCGACTATCGACGGTGAGG 60.010 63.158 1.69 0.00 43.74 3.86
5625 7648 1.009900 GGCGACTATCGACGGTGAG 60.010 63.158 1.69 0.00 43.74 3.51
5626 7649 3.104766 GGCGACTATCGACGGTGA 58.895 61.111 1.69 0.00 43.74 4.02
5631 7654 0.874607 AAATGGCGGCGACTATCGAC 60.875 55.000 16.45 0.00 46.24 4.20
5632 7655 0.596600 GAAATGGCGGCGACTATCGA 60.597 55.000 16.45 0.00 43.74 3.59
5633 7656 1.853319 GAAATGGCGGCGACTATCG 59.147 57.895 16.45 0.00 43.89 2.92
5634 7657 1.853319 CGAAATGGCGGCGACTATC 59.147 57.895 16.45 8.67 0.00 2.08
5635 7658 2.244651 GCGAAATGGCGGCGACTAT 61.245 57.895 16.45 2.56 0.00 2.12
5636 7659 2.888534 GCGAAATGGCGGCGACTA 60.889 61.111 16.45 0.00 0.00 2.59
5644 7667 2.329339 GATCAGCGGCGAAATGGC 59.671 61.111 12.98 0.00 40.44 4.40
5645 7668 1.353103 GTGATCAGCGGCGAAATGG 59.647 57.895 12.98 0.00 0.00 3.16
5646 7669 1.353103 GGTGATCAGCGGCGAAATG 59.647 57.895 12.98 5.90 0.00 2.32
5647 7670 3.813596 GGTGATCAGCGGCGAAAT 58.186 55.556 12.98 0.00 0.00 2.17
5655 7678 1.375908 TGAAGTGGCGGTGATCAGC 60.376 57.895 15.01 15.01 0.00 4.26
5656 7679 1.021390 GGTGAAGTGGCGGTGATCAG 61.021 60.000 0.00 0.00 0.00 2.90
5657 7680 1.003839 GGTGAAGTGGCGGTGATCA 60.004 57.895 0.00 0.00 0.00 2.92
5658 7681 0.392998 ATGGTGAAGTGGCGGTGATC 60.393 55.000 0.00 0.00 0.00 2.92
5659 7682 0.392998 GATGGTGAAGTGGCGGTGAT 60.393 55.000 0.00 0.00 0.00 3.06
5660 7683 1.003839 GATGGTGAAGTGGCGGTGA 60.004 57.895 0.00 0.00 0.00 4.02
5661 7684 2.390599 CGATGGTGAAGTGGCGGTG 61.391 63.158 0.00 0.00 0.00 4.94
5662 7685 2.047274 CGATGGTGAAGTGGCGGT 60.047 61.111 0.00 0.00 0.00 5.68
5663 7686 2.819595 CCGATGGTGAAGTGGCGG 60.820 66.667 0.00 0.00 0.00 6.13
5664 7687 2.047274 ACCGATGGTGAAGTGGCG 60.047 61.111 0.00 0.00 32.98 5.69
5665 7688 0.741221 GAGACCGATGGTGAAGTGGC 60.741 60.000 0.00 0.00 35.25 5.01
5666 7689 0.108138 GGAGACCGATGGTGAAGTGG 60.108 60.000 0.00 0.00 35.25 4.00
5667 7690 3.442996 GGAGACCGATGGTGAAGTG 57.557 57.895 0.00 0.00 35.25 3.16
5680 7703 3.073101 ACCGGTAAGGGCGGAGAC 61.073 66.667 4.49 0.00 46.96 3.36
5681 7704 3.072468 CACCGGTAAGGGCGGAGA 61.072 66.667 6.87 0.00 46.96 3.71
5682 7705 4.157120 CCACCGGTAAGGGCGGAG 62.157 72.222 6.87 0.00 46.96 4.63
5684 7707 4.462280 GACCACCGGTAAGGGCGG 62.462 72.222 6.87 5.66 46.96 6.13
5685 7708 3.659089 CTGACCACCGGTAAGGGCG 62.659 68.421 6.87 0.04 46.96 6.13
5686 7709 2.267961 CTGACCACCGGTAAGGGC 59.732 66.667 6.87 8.71 46.96 5.19
5687 7710 2.267961 GCTGACCACCGGTAAGGG 59.732 66.667 6.87 7.48 46.96 3.95
5689 7712 2.813908 GCGCTGACCACCGGTAAG 60.814 66.667 6.87 4.10 37.24 2.34
5690 7713 4.382320 GGCGCTGACCACCGGTAA 62.382 66.667 6.87 0.00 35.25 2.85
5696 7719 2.731571 TATGGGAGGCGCTGACCAC 61.732 63.158 17.16 8.76 35.52 4.16
5697 7720 2.364973 TATGGGAGGCGCTGACCA 60.365 61.111 17.14 17.14 37.41 4.02
5698 7721 2.109181 GTATGGGAGGCGCTGACC 59.891 66.667 7.64 7.65 0.00 4.02
5699 7722 2.279517 CGTATGGGAGGCGCTGAC 60.280 66.667 7.64 0.00 0.00 3.51
5700 7723 1.895020 AAACGTATGGGAGGCGCTGA 61.895 55.000 7.64 0.00 0.00 4.26
5701 7724 1.429148 GAAACGTATGGGAGGCGCTG 61.429 60.000 7.64 0.00 0.00 5.18
5702 7725 1.153429 GAAACGTATGGGAGGCGCT 60.153 57.895 7.64 0.00 0.00 5.92
5703 7726 1.152383 GAGAAACGTATGGGAGGCGC 61.152 60.000 0.00 0.00 0.00 6.53
5704 7727 0.870307 CGAGAAACGTATGGGAGGCG 60.870 60.000 0.00 0.00 37.22 5.52
5705 7728 2.973420 CGAGAAACGTATGGGAGGC 58.027 57.895 0.00 0.00 37.22 4.70
5716 7739 0.249155 TGTGGTGACCGACGAGAAAC 60.249 55.000 0.00 0.00 0.00 2.78
5717 7740 0.460722 TTGTGGTGACCGACGAGAAA 59.539 50.000 0.00 0.00 0.00 2.52
5718 7741 0.249155 GTTGTGGTGACCGACGAGAA 60.249 55.000 0.00 0.00 0.00 2.87
5719 7742 1.105167 AGTTGTGGTGACCGACGAGA 61.105 55.000 0.00 0.00 0.00 4.04
5720 7743 0.594602 TAGTTGTGGTGACCGACGAG 59.405 55.000 0.00 0.00 0.00 4.18
5721 7744 0.594602 CTAGTTGTGGTGACCGACGA 59.405 55.000 0.00 0.00 0.00 4.20
5722 7745 0.388134 CCTAGTTGTGGTGACCGACG 60.388 60.000 0.00 0.00 0.00 5.12
5723 7746 0.037605 CCCTAGTTGTGGTGACCGAC 60.038 60.000 0.00 0.00 0.00 4.79
5724 7747 0.178955 TCCCTAGTTGTGGTGACCGA 60.179 55.000 0.00 0.00 0.00 4.69
5725 7748 0.902531 ATCCCTAGTTGTGGTGACCG 59.097 55.000 0.00 0.00 0.00 4.79
5726 7749 1.628846 ACATCCCTAGTTGTGGTGACC 59.371 52.381 0.00 0.00 0.00 4.02
5727 7750 4.546829 TTACATCCCTAGTTGTGGTGAC 57.453 45.455 0.00 0.00 0.00 3.67
5728 7751 4.561938 CGTTTACATCCCTAGTTGTGGTGA 60.562 45.833 0.00 0.00 0.00 4.02
5729 7752 3.682858 CGTTTACATCCCTAGTTGTGGTG 59.317 47.826 0.00 0.00 0.00 4.17
5730 7753 3.307199 CCGTTTACATCCCTAGTTGTGGT 60.307 47.826 0.00 0.00 0.00 4.16
5731 7754 3.055675 TCCGTTTACATCCCTAGTTGTGG 60.056 47.826 0.00 0.00 0.00 4.17
5732 7755 4.196626 TCCGTTTACATCCCTAGTTGTG 57.803 45.455 0.00 0.00 0.00 3.33
5733 7756 5.183228 CAATCCGTTTACATCCCTAGTTGT 58.817 41.667 0.00 0.00 0.00 3.32
5734 7757 4.574828 CCAATCCGTTTACATCCCTAGTTG 59.425 45.833 0.00 0.00 0.00 3.16
5735 7758 4.472108 TCCAATCCGTTTACATCCCTAGTT 59.528 41.667 0.00 0.00 0.00 2.24
5736 7759 4.035112 TCCAATCCGTTTACATCCCTAGT 58.965 43.478 0.00 0.00 0.00 2.57
5737 7760 4.682778 TCCAATCCGTTTACATCCCTAG 57.317 45.455 0.00 0.00 0.00 3.02
5738 7761 5.373222 CAATCCAATCCGTTTACATCCCTA 58.627 41.667 0.00 0.00 0.00 3.53
5739 7762 4.207165 CAATCCAATCCGTTTACATCCCT 58.793 43.478 0.00 0.00 0.00 4.20
5740 7763 3.317993 CCAATCCAATCCGTTTACATCCC 59.682 47.826 0.00 0.00 0.00 3.85
5741 7764 4.204012 TCCAATCCAATCCGTTTACATCC 58.796 43.478 0.00 0.00 0.00 3.51
5742 7765 5.334105 CGATCCAATCCAATCCGTTTACATC 60.334 44.000 0.00 0.00 0.00 3.06
5743 7766 4.515191 CGATCCAATCCAATCCGTTTACAT 59.485 41.667 0.00 0.00 0.00 2.29
5744 7767 3.874543 CGATCCAATCCAATCCGTTTACA 59.125 43.478 0.00 0.00 0.00 2.41
5745 7768 3.250040 CCGATCCAATCCAATCCGTTTAC 59.750 47.826 0.00 0.00 0.00 2.01
5746 7769 3.134985 TCCGATCCAATCCAATCCGTTTA 59.865 43.478 0.00 0.00 0.00 2.01
5747 7770 2.092646 TCCGATCCAATCCAATCCGTTT 60.093 45.455 0.00 0.00 0.00 3.60
5748 7771 1.488812 TCCGATCCAATCCAATCCGTT 59.511 47.619 0.00 0.00 0.00 4.44
5749 7772 1.128200 TCCGATCCAATCCAATCCGT 58.872 50.000 0.00 0.00 0.00 4.69
5750 7773 2.479566 ATCCGATCCAATCCAATCCG 57.520 50.000 0.00 0.00 0.00 4.18
5751 7774 5.256474 ACATTATCCGATCCAATCCAATCC 58.744 41.667 0.00 0.00 0.00 3.01
5752 7775 6.176183 AGACATTATCCGATCCAATCCAATC 58.824 40.000 0.00 0.00 0.00 2.67
5753 7776 6.131972 AGACATTATCCGATCCAATCCAAT 57.868 37.500 0.00 0.00 0.00 3.16
5754 7777 5.567037 AGACATTATCCGATCCAATCCAA 57.433 39.130 0.00 0.00 0.00 3.53
5755 7778 5.567037 AAGACATTATCCGATCCAATCCA 57.433 39.130 0.00 0.00 0.00 3.41
5756 7779 6.371825 GGTAAAGACATTATCCGATCCAATCC 59.628 42.308 0.00 0.00 0.00 3.01
5757 7780 6.934645 TGGTAAAGACATTATCCGATCCAATC 59.065 38.462 0.00 0.00 0.00 2.67
5758 7781 6.837312 TGGTAAAGACATTATCCGATCCAAT 58.163 36.000 0.00 0.00 0.00 3.16
5759 7782 6.241882 TGGTAAAGACATTATCCGATCCAA 57.758 37.500 0.00 0.00 0.00 3.53
5760 7783 5.880164 TGGTAAAGACATTATCCGATCCA 57.120 39.130 0.00 0.00 0.00 3.41
5761 7784 7.711339 GGATATGGTAAAGACATTATCCGATCC 59.289 40.741 0.00 0.00 34.24 3.36
5762 7785 8.478877 AGGATATGGTAAAGACATTATCCGATC 58.521 37.037 0.00 0.00 41.54 3.69
5763 7786 8.380742 AGGATATGGTAAAGACATTATCCGAT 57.619 34.615 0.00 0.00 41.54 4.18
5764 7787 7.792364 AGGATATGGTAAAGACATTATCCGA 57.208 36.000 0.00 0.00 41.54 4.55
5765 7788 8.848474 AAAGGATATGGTAAAGACATTATCCG 57.152 34.615 0.00 0.00 41.54 4.18
5769 7792 9.841295 GTGGTAAAGGATATGGTAAAGACATTA 57.159 33.333 0.00 0.00 0.00 1.90
5770 7793 8.333235 TGTGGTAAAGGATATGGTAAAGACATT 58.667 33.333 0.00 0.00 0.00 2.71
5771 7794 7.867921 TGTGGTAAAGGATATGGTAAAGACAT 58.132 34.615 0.00 0.00 0.00 3.06
5772 7795 7.260387 TGTGGTAAAGGATATGGTAAAGACA 57.740 36.000 0.00 0.00 0.00 3.41
5773 7796 8.747538 AATGTGGTAAAGGATATGGTAAAGAC 57.252 34.615 0.00 0.00 0.00 3.01
5774 7797 9.762381 AAAATGTGGTAAAGGATATGGTAAAGA 57.238 29.630 0.00 0.00 0.00 2.52
5799 7822 0.793861 CGCTCCGAATCCGACAAAAA 59.206 50.000 0.00 0.00 38.22 1.94
5800 7823 1.017177 CCGCTCCGAATCCGACAAAA 61.017 55.000 0.00 0.00 38.22 2.44
5801 7824 1.447140 CCGCTCCGAATCCGACAAA 60.447 57.895 0.00 0.00 38.22 2.83
5802 7825 1.672854 ATCCGCTCCGAATCCGACAA 61.673 55.000 0.00 0.00 38.22 3.18
5803 7826 2.071844 GATCCGCTCCGAATCCGACA 62.072 60.000 0.00 0.00 38.22 4.35
5804 7827 1.371881 GATCCGCTCCGAATCCGAC 60.372 63.158 0.00 0.00 38.22 4.79
5805 7828 2.904676 CGATCCGCTCCGAATCCGA 61.905 63.158 0.00 0.00 38.22 4.55
5806 7829 2.429236 CGATCCGCTCCGAATCCG 60.429 66.667 0.00 0.00 0.00 4.18
5807 7830 1.878656 ATCCGATCCGCTCCGAATCC 61.879 60.000 0.00 0.00 0.00 3.01
5808 7831 0.809385 TATCCGATCCGCTCCGAATC 59.191 55.000 0.00 0.00 0.00 2.52
5809 7832 1.254026 TTATCCGATCCGCTCCGAAT 58.746 50.000 0.00 0.00 0.00 3.34
5810 7833 1.067846 CATTATCCGATCCGCTCCGAA 60.068 52.381 0.00 0.00 0.00 4.30
5811 7834 0.526211 CATTATCCGATCCGCTCCGA 59.474 55.000 0.00 0.00 0.00 4.55
5812 7835 0.526211 TCATTATCCGATCCGCTCCG 59.474 55.000 0.00 0.00 0.00 4.63
5813 7836 1.404315 GGTCATTATCCGATCCGCTCC 60.404 57.143 0.00 0.00 0.00 4.70
5814 7837 1.997669 GGTCATTATCCGATCCGCTC 58.002 55.000 0.00 0.00 0.00 5.03
5822 7845 2.445274 CGCATCCGGTCATTATCCG 58.555 57.895 0.00 0.00 46.49 4.18
5833 7856 0.708370 CGTATTCGAATCCGCATCCG 59.292 55.000 15.25 3.39 39.71 4.18
5834 7857 1.068474 CCGTATTCGAATCCGCATCC 58.932 55.000 15.25 0.00 39.71 3.51
5835 7858 2.060326 TCCGTATTCGAATCCGCATC 57.940 50.000 15.25 0.00 39.71 3.91
5836 7859 2.743636 ATCCGTATTCGAATCCGCAT 57.256 45.000 15.25 3.40 39.71 4.73
5837 7860 2.519377 AATCCGTATTCGAATCCGCA 57.481 45.000 15.25 0.40 39.71 5.69
5838 7861 5.115171 CGATATAATCCGTATTCGAATCCGC 59.885 44.000 15.25 5.63 39.71 5.54
5839 7862 6.656008 CGATATAATCCGTATTCGAATCCG 57.344 41.667 15.25 15.31 39.71 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.