Multiple sequence alignment - TraesCS2D01G235500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G235500 chr2D 100.000 3486 0 0 1 3486 222645630 222649115 0.000000e+00 6438.0
1 TraesCS2D01G235500 chr2D 84.286 140 8 4 1 140 575974136 575974261 1.310000e-24 124.0
2 TraesCS2D01G235500 chr2B 90.338 1925 111 33 792 2697 346671378 346669510 0.000000e+00 2455.0
3 TraesCS2D01G235500 chr2A 93.661 1341 60 16 1503 2833 240759403 240760728 0.000000e+00 1982.0
4 TraesCS2D01G235500 chr2A 96.763 865 25 2 737 1598 240758540 240759404 0.000000e+00 1439.0
5 TraesCS2D01G235500 chr2A 92.035 565 43 2 142 705 17297714 17298277 0.000000e+00 793.0
6 TraesCS2D01G235500 chr2A 87.578 322 24 5 2974 3279 240811942 240812263 3.310000e-95 359.0
7 TraesCS2D01G235500 chr2A 87.857 140 17 0 1 140 17297541 17297680 7.740000e-37 165.0
8 TraesCS2D01G235500 chr2A 84.286 140 8 4 1 140 714086223 714086348 1.310000e-24 124.0
9 TraesCS2D01G235500 chr2A 87.179 78 1 3 3409 3477 240812438 240812515 2.880000e-11 80.5
10 TraesCS2D01G235500 chr2A 93.878 49 0 3 2935 2982 240761541 240761587 1.740000e-08 71.3
11 TraesCS2D01G235500 chr5D 90.395 583 47 6 140 716 510994158 510994737 0.000000e+00 758.0
12 TraesCS2D01G235500 chr5D 89.231 585 51 9 1912 2489 251955386 251954807 0.000000e+00 721.0
13 TraesCS2D01G235500 chr5D 84.112 642 64 23 941 1569 251956387 251955771 1.390000e-163 586.0
14 TraesCS2D01G235500 chr5D 87.129 101 7 3 3243 3338 28040090 28039991 3.680000e-20 110.0
15 TraesCS2D01G235500 chr5B 89.347 582 54 7 1912 2489 284000801 284000224 0.000000e+00 725.0
16 TraesCS2D01G235500 chr5B 85.878 609 60 10 938 1540 284001943 284001355 2.950000e-175 625.0
17 TraesCS2D01G235500 chr5B 82.114 123 11 5 1912 2033 407960670 407960558 1.030000e-15 95.3
18 TraesCS2D01G235500 chr6B 89.119 579 58 5 139 716 716020251 716020825 0.000000e+00 715.0
19 TraesCS2D01G235500 chr6B 92.754 138 10 0 3 140 716020080 716020217 2.120000e-47 200.0
20 TraesCS2D01G235500 chr5A 87.925 588 57 8 1911 2489 334745299 334744717 0.000000e+00 680.0
21 TraesCS2D01G235500 chr5A 84.068 590 63 17 986 1569 334746326 334745762 1.100000e-149 540.0
22 TraesCS2D01G235500 chr7A 87.868 577 41 16 140 715 36625570 36625022 0.000000e+00 651.0
23 TraesCS2D01G235500 chr7A 92.143 140 11 0 1 140 36625743 36625604 7.630000e-47 198.0
24 TraesCS2D01G235500 chr4D 80.889 450 61 17 2032 2472 253867174 253866741 7.210000e-87 331.0
25 TraesCS2D01G235500 chr1B 91.710 193 16 0 983 1175 657319379 657319571 5.740000e-68 268.0
26 TraesCS2D01G235500 chr7D 84.286 140 6 5 1 139 83321764 83321640 4.730000e-24 122.0
27 TraesCS2D01G235500 chr1D 83.721 129 15 6 3239 3366 416082028 416082151 2.200000e-22 117.0
28 TraesCS2D01G235500 chr3D 87.500 104 8 5 3242 3342 570108252 570108353 7.910000e-22 115.0
29 TraesCS2D01G235500 chr3D 81.319 91 9 4 3243 3326 19053635 19053724 2.250000e-07 67.6
30 TraesCS2D01G235500 chr4B 98.413 63 1 0 10 72 57432975 57433037 1.020000e-20 111.0
31 TraesCS2D01G235500 chr3B 84.615 104 12 4 3243 3342 602759898 602759795 2.210000e-17 100.0
32 TraesCS2D01G235500 chr1A 100.000 28 0 0 737 764 430580091 430580064 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G235500 chr2D 222645630 222649115 3485 False 6438.00 6438 100.000000 1 3486 1 chr2D.!!$F1 3485
1 TraesCS2D01G235500 chr2B 346669510 346671378 1868 True 2455.00 2455 90.338000 792 2697 1 chr2B.!!$R1 1905
2 TraesCS2D01G235500 chr2A 240758540 240761587 3047 False 1164.10 1982 94.767333 737 2982 3 chr2A.!!$F3 2245
3 TraesCS2D01G235500 chr2A 17297541 17298277 736 False 479.00 793 89.946000 1 705 2 chr2A.!!$F2 704
4 TraesCS2D01G235500 chr2A 240811942 240812515 573 False 219.75 359 87.378500 2974 3477 2 chr2A.!!$F4 503
5 TraesCS2D01G235500 chr5D 510994158 510994737 579 False 758.00 758 90.395000 140 716 1 chr5D.!!$F1 576
6 TraesCS2D01G235500 chr5D 251954807 251956387 1580 True 653.50 721 86.671500 941 2489 2 chr5D.!!$R2 1548
7 TraesCS2D01G235500 chr5B 284000224 284001943 1719 True 675.00 725 87.612500 938 2489 2 chr5B.!!$R2 1551
8 TraesCS2D01G235500 chr6B 716020080 716020825 745 False 457.50 715 90.936500 3 716 2 chr6B.!!$F1 713
9 TraesCS2D01G235500 chr5A 334744717 334746326 1609 True 610.00 680 85.996500 986 2489 2 chr5A.!!$R1 1503
10 TraesCS2D01G235500 chr7A 36625022 36625743 721 True 424.50 651 90.005500 1 715 2 chr7A.!!$R1 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 446 0.029300 CCACCATCGGCGCAAAATAG 59.971 55.0 10.83 0.0 0.0 1.73 F
631 632 0.030638 GCCAAGCAAGTTTTCAGCGA 59.969 50.0 0.00 0.0 0.0 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1931 2446 1.687563 ACCCCTGGAAACAAGAAACG 58.312 50.000 0.00 0.0 42.06 3.60 R
2585 3117 1.808945 GTTCAACAGACATGCCTGGAG 59.191 52.381 13.95 5.4 38.44 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.717629 CGGCCACAAGCGTCGAGA 62.718 66.667 2.24 0.00 45.17 4.04
126 127 2.355132 GGATGACGACGATGTAGACACT 59.645 50.000 0.00 0.00 0.00 3.55
181 182 3.322466 CCGGCCAGACCTCACCTT 61.322 66.667 2.24 0.00 35.61 3.50
182 183 2.046892 CGGCCAGACCTCACCTTG 60.047 66.667 2.24 0.00 35.61 3.61
183 184 2.360475 GGCCAGACCTCACCTTGC 60.360 66.667 0.00 0.00 34.51 4.01
184 185 2.360475 GCCAGACCTCACCTTGCC 60.360 66.667 0.00 0.00 0.00 4.52
185 186 2.046892 CCAGACCTCACCTTGCCG 60.047 66.667 0.00 0.00 0.00 5.69
186 187 2.743718 CAGACCTCACCTTGCCGT 59.256 61.111 0.00 0.00 0.00 5.68
187 188 1.669115 CAGACCTCACCTTGCCGTG 60.669 63.158 0.00 0.00 34.93 4.94
188 189 3.050275 GACCTCACCTTGCCGTGC 61.050 66.667 0.00 0.00 33.57 5.34
189 190 4.643387 ACCTCACCTTGCCGTGCC 62.643 66.667 0.00 0.00 33.57 5.01
191 192 4.335647 CTCACCTTGCCGTGCCCT 62.336 66.667 0.00 0.00 33.57 5.19
192 193 3.850098 CTCACCTTGCCGTGCCCTT 62.850 63.158 0.00 0.00 33.57 3.95
193 194 2.912025 CACCTTGCCGTGCCCTTT 60.912 61.111 0.00 0.00 0.00 3.11
194 195 2.912025 ACCTTGCCGTGCCCTTTG 60.912 61.111 0.00 0.00 0.00 2.77
195 196 2.597217 CCTTGCCGTGCCCTTTGA 60.597 61.111 0.00 0.00 0.00 2.69
196 197 2.644992 CTTGCCGTGCCCTTTGAC 59.355 61.111 0.00 0.00 0.00 3.18
197 198 2.124109 TTGCCGTGCCCTTTGACA 60.124 55.556 0.00 0.00 0.00 3.58
198 199 2.133742 CTTGCCGTGCCCTTTGACAG 62.134 60.000 0.00 0.00 0.00 3.51
199 200 3.365265 GCCGTGCCCTTTGACAGG 61.365 66.667 0.00 0.00 43.49 4.00
204 205 2.759795 GCCCTTTGACAGGCTCCT 59.240 61.111 0.00 0.00 46.14 3.69
205 206 1.377856 GCCCTTTGACAGGCTCCTC 60.378 63.158 0.00 0.00 46.14 3.71
206 207 1.301293 CCCTTTGACAGGCTCCTCC 59.699 63.158 0.00 0.00 42.29 4.30
207 208 1.301293 CCTTTGACAGGCTCCTCCC 59.699 63.158 0.00 0.00 35.13 4.30
208 209 1.078848 CTTTGACAGGCTCCTCCCG 60.079 63.158 0.00 0.00 34.51 5.14
209 210 3.254024 TTTGACAGGCTCCTCCCGC 62.254 63.158 0.00 0.00 34.51 6.13
227 228 3.775654 CCGTCTGCTGTCCCCCTC 61.776 72.222 0.00 0.00 0.00 4.30
228 229 4.135153 CGTCTGCTGTCCCCCTCG 62.135 72.222 0.00 0.00 0.00 4.63
229 230 4.459089 GTCTGCTGTCCCCCTCGC 62.459 72.222 0.00 0.00 0.00 5.03
234 235 3.787001 CTGTCCCCCTCGCCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
238 239 3.078836 CCCCCTCGCCCTTCGTTA 61.079 66.667 0.00 0.00 39.67 3.18
239 240 2.186125 CCCCTCGCCCTTCGTTAC 59.814 66.667 0.00 0.00 39.67 2.50
240 241 2.202703 CCCTCGCCCTTCGTTACG 60.203 66.667 0.00 0.00 39.67 3.18
241 242 2.570181 CCTCGCCCTTCGTTACGT 59.430 61.111 4.24 0.00 39.67 3.57
242 243 1.515736 CCTCGCCCTTCGTTACGTC 60.516 63.158 4.24 0.00 39.67 4.34
243 244 1.866496 CTCGCCCTTCGTTACGTCG 60.866 63.158 4.24 0.00 39.67 5.12
244 245 2.126734 CGCCCTTCGTTACGTCGT 60.127 61.111 4.24 2.21 0.00 4.34
245 246 2.148365 CGCCCTTCGTTACGTCGTC 61.148 63.158 0.00 0.00 0.00 4.20
246 247 1.081242 GCCCTTCGTTACGTCGTCA 60.081 57.895 0.00 0.00 0.00 4.35
247 248 1.069378 GCCCTTCGTTACGTCGTCAG 61.069 60.000 0.00 0.00 0.00 3.51
248 249 0.518636 CCCTTCGTTACGTCGTCAGA 59.481 55.000 0.00 0.00 0.00 3.27
249 250 1.069022 CCCTTCGTTACGTCGTCAGAA 60.069 52.381 0.00 5.59 0.00 3.02
250 251 2.240040 CCTTCGTTACGTCGTCAGAAG 58.760 52.381 20.89 20.89 35.99 2.85
251 252 2.096069 CCTTCGTTACGTCGTCAGAAGA 60.096 50.000 25.63 11.28 37.78 2.87
252 253 2.869358 TCGTTACGTCGTCAGAAGAG 57.131 50.000 0.00 0.00 0.00 2.85
253 254 2.138320 TCGTTACGTCGTCAGAAGAGT 58.862 47.619 0.00 0.00 0.00 3.24
254 255 2.096565 TCGTTACGTCGTCAGAAGAGTG 60.097 50.000 0.00 0.00 0.00 3.51
255 256 1.977412 GTTACGTCGTCAGAAGAGTGC 59.023 52.381 0.00 0.00 0.00 4.40
256 257 0.520404 TACGTCGTCAGAAGAGTGCC 59.480 55.000 0.00 0.00 0.00 5.01
257 258 1.444553 CGTCGTCAGAAGAGTGCCC 60.445 63.158 0.00 0.00 0.00 5.36
258 259 1.444553 GTCGTCAGAAGAGTGCCCG 60.445 63.158 0.00 0.00 0.00 6.13
259 260 2.125912 CGTCAGAAGAGTGCCCGG 60.126 66.667 0.00 0.00 0.00 5.73
260 261 2.266055 GTCAGAAGAGTGCCCGGG 59.734 66.667 19.09 19.09 0.00 5.73
261 262 3.706373 TCAGAAGAGTGCCCGGGC 61.706 66.667 39.40 39.40 42.35 6.13
264 265 4.821589 GAAGAGTGCCCGGGCGAG 62.822 72.222 39.00 5.94 45.51 5.03
278 279 2.954611 CGAGTCTGTCGCCAGTCA 59.045 61.111 0.00 0.00 43.03 3.41
279 280 1.285950 CGAGTCTGTCGCCAGTCAA 59.714 57.895 0.00 0.00 43.03 3.18
280 281 0.730834 CGAGTCTGTCGCCAGTCAAG 60.731 60.000 0.00 0.00 43.03 3.02
281 282 0.598562 GAGTCTGTCGCCAGTCAAGA 59.401 55.000 0.00 0.00 39.82 3.02
282 283 0.315568 AGTCTGTCGCCAGTCAAGAC 59.684 55.000 0.00 0.00 39.82 3.01
283 284 0.667792 GTCTGTCGCCAGTCAAGACC 60.668 60.000 0.00 0.00 39.82 3.85
284 285 0.827925 TCTGTCGCCAGTCAAGACCT 60.828 55.000 0.00 0.00 39.82 3.85
285 286 0.389166 CTGTCGCCAGTCAAGACCTC 60.389 60.000 0.00 0.00 34.24 3.85
286 287 0.827925 TGTCGCCAGTCAAGACCTCT 60.828 55.000 0.00 0.00 34.24 3.69
287 288 0.109039 GTCGCCAGTCAAGACCTCTC 60.109 60.000 0.00 0.00 0.00 3.20
288 289 1.216710 CGCCAGTCAAGACCTCTCC 59.783 63.158 0.00 0.00 0.00 3.71
289 290 1.254284 CGCCAGTCAAGACCTCTCCT 61.254 60.000 0.00 0.00 0.00 3.69
290 291 0.534873 GCCAGTCAAGACCTCTCCTC 59.465 60.000 0.00 0.00 0.00 3.71
291 292 0.814457 CCAGTCAAGACCTCTCCTCG 59.186 60.000 0.00 0.00 0.00 4.63
292 293 0.172352 CAGTCAAGACCTCTCCTCGC 59.828 60.000 0.00 0.00 0.00 5.03
293 294 0.968393 AGTCAAGACCTCTCCTCGCC 60.968 60.000 0.00 0.00 0.00 5.54
294 295 2.046864 TCAAGACCTCTCCTCGCCG 61.047 63.158 0.00 0.00 0.00 6.46
295 296 3.453679 AAGACCTCTCCTCGCCGC 61.454 66.667 0.00 0.00 0.00 6.53
317 318 3.134879 TTGTCCGCGACAACTCCT 58.865 55.556 8.23 0.00 45.88 3.69
318 319 1.006571 TTGTCCGCGACAACTCCTC 60.007 57.895 8.23 0.00 45.88 3.71
319 320 2.504244 GTCCGCGACAACTCCTCG 60.504 66.667 8.23 0.00 32.09 4.63
320 321 2.981909 TCCGCGACAACTCCTCGT 60.982 61.111 8.23 0.00 33.51 4.18
321 322 2.504244 CCGCGACAACTCCTCGTC 60.504 66.667 8.23 0.00 33.51 4.20
322 323 2.254350 CGCGACAACTCCTCGTCA 59.746 61.111 0.00 0.00 33.51 4.35
323 324 2.081212 CGCGACAACTCCTCGTCAC 61.081 63.158 0.00 0.00 33.51 3.67
324 325 1.733399 GCGACAACTCCTCGTCACC 60.733 63.158 0.00 0.00 33.51 4.02
325 326 1.080705 CGACAACTCCTCGTCACCC 60.081 63.158 0.00 0.00 32.24 4.61
326 327 1.802337 CGACAACTCCTCGTCACCCA 61.802 60.000 0.00 0.00 32.24 4.51
327 328 0.319641 GACAACTCCTCGTCACCCAC 60.320 60.000 0.00 0.00 32.24 4.61
328 329 1.004918 CAACTCCTCGTCACCCACC 60.005 63.158 0.00 0.00 0.00 4.61
329 330 2.571216 AACTCCTCGTCACCCACCG 61.571 63.158 0.00 0.00 0.00 4.94
330 331 2.989824 CTCCTCGTCACCCACCGT 60.990 66.667 0.00 0.00 0.00 4.83
331 332 2.987547 TCCTCGTCACCCACCGTC 60.988 66.667 0.00 0.00 0.00 4.79
332 333 4.415332 CCTCGTCACCCACCGTCG 62.415 72.222 0.00 0.00 0.00 5.12
333 334 3.667282 CTCGTCACCCACCGTCGT 61.667 66.667 0.00 0.00 0.00 4.34
334 335 3.606065 CTCGTCACCCACCGTCGTC 62.606 68.421 0.00 0.00 0.00 4.20
335 336 4.712425 CGTCACCCACCGTCGTCC 62.712 72.222 0.00 0.00 0.00 4.79
336 337 3.608662 GTCACCCACCGTCGTCCA 61.609 66.667 0.00 0.00 0.00 4.02
337 338 3.608662 TCACCCACCGTCGTCCAC 61.609 66.667 0.00 0.00 0.00 4.02
338 339 3.918977 CACCCACCGTCGTCCACA 61.919 66.667 0.00 0.00 0.00 4.17
339 340 2.920912 ACCCACCGTCGTCCACAT 60.921 61.111 0.00 0.00 0.00 3.21
340 341 1.607178 ACCCACCGTCGTCCACATA 60.607 57.895 0.00 0.00 0.00 2.29
341 342 1.186917 ACCCACCGTCGTCCACATAA 61.187 55.000 0.00 0.00 0.00 1.90
342 343 0.177141 CCCACCGTCGTCCACATAAT 59.823 55.000 0.00 0.00 0.00 1.28
343 344 1.406341 CCCACCGTCGTCCACATAATT 60.406 52.381 0.00 0.00 0.00 1.40
344 345 2.352388 CCACCGTCGTCCACATAATTT 58.648 47.619 0.00 0.00 0.00 1.82
345 346 2.350498 CCACCGTCGTCCACATAATTTC 59.650 50.000 0.00 0.00 0.00 2.17
346 347 2.350498 CACCGTCGTCCACATAATTTCC 59.650 50.000 0.00 0.00 0.00 3.13
347 348 2.027929 ACCGTCGTCCACATAATTTCCA 60.028 45.455 0.00 0.00 0.00 3.53
348 349 2.607635 CCGTCGTCCACATAATTTCCAG 59.392 50.000 0.00 0.00 0.00 3.86
349 350 3.259064 CGTCGTCCACATAATTTCCAGT 58.741 45.455 0.00 0.00 0.00 4.00
350 351 3.306166 CGTCGTCCACATAATTTCCAGTC 59.694 47.826 0.00 0.00 0.00 3.51
351 352 4.250464 GTCGTCCACATAATTTCCAGTCA 58.750 43.478 0.00 0.00 0.00 3.41
352 353 4.092968 GTCGTCCACATAATTTCCAGTCAC 59.907 45.833 0.00 0.00 0.00 3.67
353 354 3.374058 CGTCCACATAATTTCCAGTCACC 59.626 47.826 0.00 0.00 0.00 4.02
354 355 3.694566 GTCCACATAATTTCCAGTCACCC 59.305 47.826 0.00 0.00 0.00 4.61
355 356 3.591527 TCCACATAATTTCCAGTCACCCT 59.408 43.478 0.00 0.00 0.00 4.34
356 357 3.947834 CCACATAATTTCCAGTCACCCTC 59.052 47.826 0.00 0.00 0.00 4.30
357 358 4.324563 CCACATAATTTCCAGTCACCCTCT 60.325 45.833 0.00 0.00 0.00 3.69
358 359 4.637534 CACATAATTTCCAGTCACCCTCTG 59.362 45.833 0.00 0.00 0.00 3.35
359 360 2.206576 AATTTCCAGTCACCCTCTGC 57.793 50.000 0.00 0.00 0.00 4.26
360 361 0.329596 ATTTCCAGTCACCCTCTGCC 59.670 55.000 0.00 0.00 0.00 4.85
361 362 2.111999 TTTCCAGTCACCCTCTGCCG 62.112 60.000 0.00 0.00 0.00 5.69
362 363 4.767255 CCAGTCACCCTCTGCCGC 62.767 72.222 0.00 0.00 0.00 6.53
363 364 4.767255 CAGTCACCCTCTGCCGCC 62.767 72.222 0.00 0.00 0.00 6.13
379 380 3.151022 CCCTCGCCTCCAGGACTC 61.151 72.222 0.00 0.00 37.39 3.36
380 381 3.151022 CCTCGCCTCCAGGACTCC 61.151 72.222 0.00 0.00 37.39 3.85
381 382 3.522731 CTCGCCTCCAGGACTCCG 61.523 72.222 0.00 0.00 37.39 4.63
384 385 3.844090 GCCTCCAGGACTCCGCTC 61.844 72.222 0.00 0.00 37.39 5.03
385 386 3.151022 CCTCCAGGACTCCGCTCC 61.151 72.222 0.00 0.00 37.39 4.70
386 387 2.363018 CTCCAGGACTCCGCTCCA 60.363 66.667 0.00 0.00 31.94 3.86
387 388 2.680352 TCCAGGACTCCGCTCCAC 60.680 66.667 0.00 0.00 31.94 4.02
388 389 4.135153 CCAGGACTCCGCTCCACG 62.135 72.222 0.00 0.00 43.15 4.94
398 399 3.311110 GCTCCACGACCCTCACCA 61.311 66.667 0.00 0.00 0.00 4.17
399 400 2.657237 CTCCACGACCCTCACCAC 59.343 66.667 0.00 0.00 0.00 4.16
400 401 3.282745 CTCCACGACCCTCACCACG 62.283 68.421 0.00 0.00 0.00 4.94
409 410 4.717629 CTCACCACGCCGCTTCGA 62.718 66.667 1.50 0.00 0.00 3.71
410 411 4.717629 TCACCACGCCGCTTCGAG 62.718 66.667 1.50 0.00 0.00 4.04
440 441 2.823593 CATCCACCATCGGCGCAA 60.824 61.111 10.83 0.00 0.00 4.85
441 442 2.045438 ATCCACCATCGGCGCAAA 60.045 55.556 10.83 0.00 0.00 3.68
442 443 1.677300 ATCCACCATCGGCGCAAAA 60.677 52.632 10.83 0.00 0.00 2.44
443 444 1.037030 ATCCACCATCGGCGCAAAAT 61.037 50.000 10.83 0.00 0.00 1.82
444 445 0.393132 TCCACCATCGGCGCAAAATA 60.393 50.000 10.83 0.00 0.00 1.40
445 446 0.029300 CCACCATCGGCGCAAAATAG 59.971 55.000 10.83 0.00 0.00 1.73
446 447 0.029300 CACCATCGGCGCAAAATAGG 59.971 55.000 10.83 5.45 0.00 2.57
447 448 0.107410 ACCATCGGCGCAAAATAGGA 60.107 50.000 10.83 0.00 0.00 2.94
448 449 1.238439 CCATCGGCGCAAAATAGGAT 58.762 50.000 10.83 0.00 0.00 3.24
449 450 1.608590 CCATCGGCGCAAAATAGGATT 59.391 47.619 10.83 0.00 0.00 3.01
450 451 2.350772 CCATCGGCGCAAAATAGGATTC 60.351 50.000 10.83 0.00 0.00 2.52
451 452 0.934496 TCGGCGCAAAATAGGATTCG 59.066 50.000 10.83 0.00 0.00 3.34
452 453 0.657368 CGGCGCAAAATAGGATTCGC 60.657 55.000 10.83 0.00 41.55 4.70
453 454 3.164028 GCGCAAAATAGGATTCGCC 57.836 52.632 0.30 0.00 37.02 5.54
454 455 0.657368 GCGCAAAATAGGATTCGCCG 60.657 55.000 0.30 0.00 43.43 6.46
455 456 0.041312 CGCAAAATAGGATTCGCCGG 60.041 55.000 0.00 0.00 43.43 6.13
456 457 1.305201 GCAAAATAGGATTCGCCGGA 58.695 50.000 5.05 0.00 43.43 5.14
457 458 1.264288 GCAAAATAGGATTCGCCGGAG 59.736 52.381 5.05 0.00 43.43 4.63
458 459 1.264288 CAAAATAGGATTCGCCGGAGC 59.736 52.381 5.05 0.00 43.43 4.70
459 460 0.250338 AAATAGGATTCGCCGGAGCC 60.250 55.000 5.05 0.00 43.43 4.70
460 461 2.436087 AATAGGATTCGCCGGAGCCG 62.436 60.000 5.05 0.00 43.43 5.52
462 463 4.301027 GGATTCGCCGGAGCCGAT 62.301 66.667 5.05 0.00 42.83 4.18
463 464 3.038417 GATTCGCCGGAGCCGATG 61.038 66.667 5.05 2.25 42.83 3.84
469 470 4.363990 CCGGAGCCGATGCGCTAT 62.364 66.667 9.73 0.00 42.15 2.97
470 471 3.108289 CGGAGCCGATGCGCTATG 61.108 66.667 9.73 0.00 44.33 2.23
471 472 2.340078 GGAGCCGATGCGCTATGA 59.660 61.111 9.73 0.00 44.33 2.15
472 473 1.735920 GGAGCCGATGCGCTATGAG 60.736 63.158 9.73 0.00 44.33 2.90
473 474 1.287191 GAGCCGATGCGCTATGAGA 59.713 57.895 9.73 0.00 44.33 3.27
474 475 1.006314 GAGCCGATGCGCTATGAGAC 61.006 60.000 9.73 0.00 44.33 3.36
475 476 2.368105 GCCGATGCGCTATGAGACG 61.368 63.158 9.73 3.85 0.00 4.18
481 482 4.569023 CGCTATGAGACGCCCGCA 62.569 66.667 0.00 0.00 0.00 5.69
482 483 2.659897 GCTATGAGACGCCCGCAG 60.660 66.667 0.00 0.00 0.00 5.18
483 484 2.659897 CTATGAGACGCCCGCAGC 60.660 66.667 0.00 0.00 38.52 5.25
493 494 4.545706 CCCGCAGCGGCAAGGATA 62.546 66.667 29.55 0.00 46.86 2.59
494 495 2.969238 CCGCAGCGGCAAGGATAG 60.969 66.667 23.64 0.00 41.17 2.08
495 496 2.969238 CGCAGCGGCAAGGATAGG 60.969 66.667 7.00 0.00 41.24 2.57
496 497 2.505982 GCAGCGGCAAGGATAGGA 59.494 61.111 3.18 0.00 40.72 2.94
497 498 1.596477 GCAGCGGCAAGGATAGGAG 60.596 63.158 3.18 0.00 40.72 3.69
498 499 2.032860 GCAGCGGCAAGGATAGGAGA 62.033 60.000 3.18 0.00 40.72 3.71
499 500 0.033228 CAGCGGCAAGGATAGGAGAG 59.967 60.000 1.45 0.00 0.00 3.20
500 501 1.118356 AGCGGCAAGGATAGGAGAGG 61.118 60.000 1.45 0.00 0.00 3.69
501 502 2.053618 CGGCAAGGATAGGAGAGGG 58.946 63.158 0.00 0.00 0.00 4.30
502 503 1.757949 GGCAAGGATAGGAGAGGGC 59.242 63.158 0.00 0.00 0.00 5.19
503 504 1.369321 GCAAGGATAGGAGAGGGCG 59.631 63.158 0.00 0.00 0.00 6.13
504 505 2.053618 CAAGGATAGGAGAGGGCGG 58.946 63.158 0.00 0.00 0.00 6.13
505 506 0.470080 CAAGGATAGGAGAGGGCGGA 60.470 60.000 0.00 0.00 0.00 5.54
506 507 0.178947 AAGGATAGGAGAGGGCGGAG 60.179 60.000 0.00 0.00 0.00 4.63
542 543 3.330720 GGTGGGGAGGTGGACCAG 61.331 72.222 0.00 0.00 38.89 4.00
543 544 3.330720 GTGGGGAGGTGGACCAGG 61.331 72.222 0.00 0.00 38.89 4.45
544 545 3.869934 TGGGGAGGTGGACCAGGT 61.870 66.667 0.00 0.00 38.89 4.00
545 546 3.009714 GGGGAGGTGGACCAGGTC 61.010 72.222 11.70 11.70 38.89 3.85
546 547 3.391382 GGGAGGTGGACCAGGTCG 61.391 72.222 13.80 0.00 38.89 4.79
547 548 3.391382 GGAGGTGGACCAGGTCGG 61.391 72.222 13.80 0.00 42.50 4.79
548 549 2.283676 GAGGTGGACCAGGTCGGA 60.284 66.667 13.80 0.00 38.63 4.55
549 550 2.283966 AGGTGGACCAGGTCGGAG 60.284 66.667 13.80 0.00 38.63 4.63
550 551 2.283676 GGTGGACCAGGTCGGAGA 60.284 66.667 13.80 0.00 38.63 3.71
551 552 1.911766 GGTGGACCAGGTCGGAGAA 60.912 63.158 13.80 0.00 38.63 2.87
552 553 1.592223 GTGGACCAGGTCGGAGAAG 59.408 63.158 13.80 0.00 39.69 2.85
553 554 0.898789 GTGGACCAGGTCGGAGAAGA 60.899 60.000 13.80 0.00 39.69 2.87
554 555 0.041238 TGGACCAGGTCGGAGAAGAT 59.959 55.000 13.80 0.00 39.69 2.40
555 556 0.461961 GGACCAGGTCGGAGAAGATG 59.538 60.000 13.80 0.00 39.69 2.90
556 557 0.461961 GACCAGGTCGGAGAAGATGG 59.538 60.000 3.05 0.00 39.69 3.51
557 558 0.978146 ACCAGGTCGGAGAAGATGGG 60.978 60.000 0.00 0.00 39.19 4.00
558 559 1.690219 CCAGGTCGGAGAAGATGGGG 61.690 65.000 0.00 0.00 39.69 4.96
559 560 1.383248 AGGTCGGAGAAGATGGGGG 60.383 63.158 0.00 0.00 39.69 5.40
560 561 1.382695 GGTCGGAGAAGATGGGGGA 60.383 63.158 0.00 0.00 39.69 4.81
561 562 0.981277 GGTCGGAGAAGATGGGGGAA 60.981 60.000 0.00 0.00 39.69 3.97
562 563 1.132500 GTCGGAGAAGATGGGGGAAT 58.868 55.000 0.00 0.00 39.69 3.01
563 564 2.326428 GTCGGAGAAGATGGGGGAATA 58.674 52.381 0.00 0.00 39.69 1.75
564 565 2.704065 GTCGGAGAAGATGGGGGAATAA 59.296 50.000 0.00 0.00 39.69 1.40
565 566 3.135895 GTCGGAGAAGATGGGGGAATAAA 59.864 47.826 0.00 0.00 39.69 1.40
566 567 3.391296 TCGGAGAAGATGGGGGAATAAAG 59.609 47.826 0.00 0.00 0.00 1.85
567 568 3.391296 CGGAGAAGATGGGGGAATAAAGA 59.609 47.826 0.00 0.00 0.00 2.52
568 569 4.503991 CGGAGAAGATGGGGGAATAAAGAG 60.504 50.000 0.00 0.00 0.00 2.85
569 570 4.660771 GGAGAAGATGGGGGAATAAAGAGA 59.339 45.833 0.00 0.00 0.00 3.10
570 571 5.221823 GGAGAAGATGGGGGAATAAAGAGAG 60.222 48.000 0.00 0.00 0.00 3.20
571 572 5.292815 AGAAGATGGGGGAATAAAGAGAGT 58.707 41.667 0.00 0.00 0.00 3.24
572 573 5.131809 AGAAGATGGGGGAATAAAGAGAGTG 59.868 44.000 0.00 0.00 0.00 3.51
573 574 4.635473 AGATGGGGGAATAAAGAGAGTGA 58.365 43.478 0.00 0.00 0.00 3.41
574 575 4.657969 AGATGGGGGAATAAAGAGAGTGAG 59.342 45.833 0.00 0.00 0.00 3.51
575 576 2.505819 TGGGGGAATAAAGAGAGTGAGC 59.494 50.000 0.00 0.00 0.00 4.26
576 577 2.483889 GGGGGAATAAAGAGAGTGAGCG 60.484 54.545 0.00 0.00 0.00 5.03
577 578 2.168728 GGGGAATAAAGAGAGTGAGCGT 59.831 50.000 0.00 0.00 0.00 5.07
578 579 3.190874 GGGAATAAAGAGAGTGAGCGTG 58.809 50.000 0.00 0.00 0.00 5.34
579 580 3.190874 GGAATAAAGAGAGTGAGCGTGG 58.809 50.000 0.00 0.00 0.00 4.94
580 581 2.969628 ATAAAGAGAGTGAGCGTGGG 57.030 50.000 0.00 0.00 0.00 4.61
581 582 0.895530 TAAAGAGAGTGAGCGTGGGG 59.104 55.000 0.00 0.00 0.00 4.96
582 583 0.832135 AAAGAGAGTGAGCGTGGGGA 60.832 55.000 0.00 0.00 0.00 4.81
583 584 1.254284 AAGAGAGTGAGCGTGGGGAG 61.254 60.000 0.00 0.00 0.00 4.30
584 585 2.681778 AGAGTGAGCGTGGGGAGG 60.682 66.667 0.00 0.00 0.00 4.30
585 586 3.775654 GAGTGAGCGTGGGGAGGG 61.776 72.222 0.00 0.00 0.00 4.30
586 587 4.316823 AGTGAGCGTGGGGAGGGA 62.317 66.667 0.00 0.00 0.00 4.20
587 588 3.775654 GTGAGCGTGGGGAGGGAG 61.776 72.222 0.00 0.00 0.00 4.30
588 589 3.992641 TGAGCGTGGGGAGGGAGA 61.993 66.667 0.00 0.00 0.00 3.71
589 590 2.444895 GAGCGTGGGGAGGGAGAT 60.445 66.667 0.00 0.00 0.00 2.75
590 591 2.765807 AGCGTGGGGAGGGAGATG 60.766 66.667 0.00 0.00 0.00 2.90
591 592 2.764128 GCGTGGGGAGGGAGATGA 60.764 66.667 0.00 0.00 0.00 2.92
592 593 2.801631 GCGTGGGGAGGGAGATGAG 61.802 68.421 0.00 0.00 0.00 2.90
593 594 1.381872 CGTGGGGAGGGAGATGAGT 60.382 63.158 0.00 0.00 0.00 3.41
594 595 1.680522 CGTGGGGAGGGAGATGAGTG 61.681 65.000 0.00 0.00 0.00 3.51
595 596 1.003442 TGGGGAGGGAGATGAGTGG 59.997 63.158 0.00 0.00 0.00 4.00
596 597 1.314867 GGGGAGGGAGATGAGTGGA 59.685 63.158 0.00 0.00 0.00 4.02
597 598 0.104725 GGGGAGGGAGATGAGTGGAT 60.105 60.000 0.00 0.00 0.00 3.41
598 599 1.150135 GGGGAGGGAGATGAGTGGATA 59.850 57.143 0.00 0.00 0.00 2.59
599 600 2.427889 GGGGAGGGAGATGAGTGGATAA 60.428 54.545 0.00 0.00 0.00 1.75
600 601 2.903135 GGGAGGGAGATGAGTGGATAAG 59.097 54.545 0.00 0.00 0.00 1.73
601 602 2.903135 GGAGGGAGATGAGTGGATAAGG 59.097 54.545 0.00 0.00 0.00 2.69
602 603 3.582164 GAGGGAGATGAGTGGATAAGGT 58.418 50.000 0.00 0.00 0.00 3.50
603 604 3.576550 GAGGGAGATGAGTGGATAAGGTC 59.423 52.174 0.00 0.00 0.00 3.85
604 605 2.297597 GGGAGATGAGTGGATAAGGTCG 59.702 54.545 0.00 0.00 0.00 4.79
605 606 2.288518 GGAGATGAGTGGATAAGGTCGC 60.289 54.545 0.00 0.00 0.00 5.19
606 607 1.338337 AGATGAGTGGATAAGGTCGCG 59.662 52.381 0.00 0.00 0.00 5.87
607 608 1.067212 GATGAGTGGATAAGGTCGCGT 59.933 52.381 5.77 0.00 0.00 6.01
608 609 0.892755 TGAGTGGATAAGGTCGCGTT 59.107 50.000 5.77 0.00 0.00 4.84
609 610 1.135199 TGAGTGGATAAGGTCGCGTTC 60.135 52.381 5.77 0.09 0.00 3.95
610 611 0.179145 AGTGGATAAGGTCGCGTTCG 60.179 55.000 5.77 0.00 0.00 3.95
611 612 1.140161 TGGATAAGGTCGCGTTCGG 59.860 57.895 5.77 0.00 36.13 4.30
612 613 1.590792 GGATAAGGTCGCGTTCGGG 60.591 63.158 5.77 2.96 36.13 5.14
613 614 2.202837 ATAAGGTCGCGTTCGGGC 60.203 61.111 5.77 0.81 36.13 6.13
614 615 3.728279 ATAAGGTCGCGTTCGGGCC 62.728 63.158 5.77 0.00 36.13 5.80
621 622 4.404654 GCGTTCGGGCCAAGCAAG 62.405 66.667 4.39 0.00 0.00 4.01
622 623 2.978010 CGTTCGGGCCAAGCAAGT 60.978 61.111 4.39 0.00 0.00 3.16
623 624 2.551912 CGTTCGGGCCAAGCAAGTT 61.552 57.895 4.39 0.00 0.00 2.66
624 625 1.739667 GTTCGGGCCAAGCAAGTTT 59.260 52.632 4.39 0.00 0.00 2.66
625 626 0.104120 GTTCGGGCCAAGCAAGTTTT 59.896 50.000 4.39 0.00 0.00 2.43
626 627 0.387565 TTCGGGCCAAGCAAGTTTTC 59.612 50.000 4.39 0.00 0.00 2.29
627 628 0.753479 TCGGGCCAAGCAAGTTTTCA 60.753 50.000 4.39 0.00 0.00 2.69
628 629 0.318955 CGGGCCAAGCAAGTTTTCAG 60.319 55.000 4.39 0.00 0.00 3.02
629 630 0.601046 GGGCCAAGCAAGTTTTCAGC 60.601 55.000 4.39 0.00 0.00 4.26
630 631 0.940991 GGCCAAGCAAGTTTTCAGCG 60.941 55.000 0.00 0.00 0.00 5.18
631 632 0.030638 GCCAAGCAAGTTTTCAGCGA 59.969 50.000 0.00 0.00 0.00 4.93
632 633 1.535860 GCCAAGCAAGTTTTCAGCGAA 60.536 47.619 0.00 0.00 0.00 4.70
633 634 2.119457 CCAAGCAAGTTTTCAGCGAAC 58.881 47.619 0.00 0.00 0.00 3.95
634 635 1.775208 CAAGCAAGTTTTCAGCGAACG 59.225 47.619 0.00 0.00 32.38 3.95
635 636 1.295792 AGCAAGTTTTCAGCGAACGA 58.704 45.000 0.00 0.00 32.38 3.85
636 637 1.261619 AGCAAGTTTTCAGCGAACGAG 59.738 47.619 0.00 0.00 32.38 4.18
637 638 1.003866 GCAAGTTTTCAGCGAACGAGT 60.004 47.619 0.00 0.00 32.38 4.18
638 639 2.538939 GCAAGTTTTCAGCGAACGAGTT 60.539 45.455 0.00 0.00 32.38 3.01
639 640 3.280775 CAAGTTTTCAGCGAACGAGTTC 58.719 45.455 5.93 5.93 36.29 3.01
640 641 2.822764 AGTTTTCAGCGAACGAGTTCT 58.177 42.857 13.27 0.00 37.44 3.01
641 642 2.795470 AGTTTTCAGCGAACGAGTTCTC 59.205 45.455 13.27 6.17 37.44 2.87
642 643 2.502213 TTTCAGCGAACGAGTTCTCA 57.498 45.000 13.27 0.00 37.44 3.27
643 644 1.767289 TTCAGCGAACGAGTTCTCAC 58.233 50.000 13.27 4.02 37.44 3.51
644 645 0.952280 TCAGCGAACGAGTTCTCACT 59.048 50.000 13.27 5.97 37.44 3.41
645 646 1.056103 CAGCGAACGAGTTCTCACTG 58.944 55.000 13.27 12.87 37.44 3.66
646 647 0.664767 AGCGAACGAGTTCTCACTGC 60.665 55.000 13.27 8.95 37.44 4.40
647 648 0.664767 GCGAACGAGTTCTCACTGCT 60.665 55.000 13.27 0.00 37.44 4.24
648 649 1.056103 CGAACGAGTTCTCACTGCTG 58.944 55.000 13.27 0.00 37.44 4.41
649 650 1.335051 CGAACGAGTTCTCACTGCTGA 60.335 52.381 13.27 0.00 37.44 4.26
650 651 2.055100 GAACGAGTTCTCACTGCTGAC 58.945 52.381 8.58 0.00 36.69 3.51
651 652 0.039978 ACGAGTTCTCACTGCTGACG 60.040 55.000 0.00 0.00 31.22 4.35
652 653 0.039978 CGAGTTCTCACTGCTGACGT 60.040 55.000 0.00 0.00 31.22 4.34
653 654 1.413382 GAGTTCTCACTGCTGACGTG 58.587 55.000 0.00 0.00 31.22 4.49
654 655 0.747255 AGTTCTCACTGCTGACGTGT 59.253 50.000 0.00 0.00 34.14 4.49
655 656 1.132588 GTTCTCACTGCTGACGTGTC 58.867 55.000 0.00 0.00 34.14 3.67
656 657 1.032794 TTCTCACTGCTGACGTGTCT 58.967 50.000 0.00 0.00 34.14 3.41
657 658 0.593618 TCTCACTGCTGACGTGTCTC 59.406 55.000 0.00 0.00 34.14 3.36
658 659 0.595588 CTCACTGCTGACGTGTCTCT 59.404 55.000 0.00 0.00 34.14 3.10
659 660 0.312102 TCACTGCTGACGTGTCTCTG 59.688 55.000 0.00 1.02 34.14 3.35
660 661 1.006805 ACTGCTGACGTGTCTCTGC 60.007 57.895 0.00 0.00 0.00 4.26
661 662 1.735920 CTGCTGACGTGTCTCTGCC 60.736 63.158 0.00 0.00 0.00 4.85
662 663 2.340078 GCTGACGTGTCTCTGCCA 59.660 61.111 0.00 0.00 0.00 4.92
663 664 1.300931 GCTGACGTGTCTCTGCCAA 60.301 57.895 0.00 0.00 0.00 4.52
664 665 1.287730 GCTGACGTGTCTCTGCCAAG 61.288 60.000 0.00 0.00 0.00 3.61
665 666 0.032678 CTGACGTGTCTCTGCCAAGT 59.967 55.000 0.00 0.00 0.00 3.16
666 667 0.249447 TGACGTGTCTCTGCCAAGTG 60.249 55.000 0.00 0.00 0.00 3.16
667 668 1.560860 GACGTGTCTCTGCCAAGTGC 61.561 60.000 0.00 0.00 41.77 4.40
668 669 1.301244 CGTGTCTCTGCCAAGTGCT 60.301 57.895 0.00 0.00 42.00 4.40
669 670 0.882042 CGTGTCTCTGCCAAGTGCTT 60.882 55.000 0.00 0.00 42.00 3.91
670 671 1.312815 GTGTCTCTGCCAAGTGCTTT 58.687 50.000 0.00 0.00 42.00 3.51
671 672 2.494059 GTGTCTCTGCCAAGTGCTTTA 58.506 47.619 0.00 0.00 42.00 1.85
672 673 2.224314 GTGTCTCTGCCAAGTGCTTTAC 59.776 50.000 0.00 0.00 42.00 2.01
673 674 1.461127 GTCTCTGCCAAGTGCTTTACG 59.539 52.381 0.00 0.00 42.00 3.18
674 675 1.343142 TCTCTGCCAAGTGCTTTACGA 59.657 47.619 0.00 0.00 42.00 3.43
675 676 2.028112 TCTCTGCCAAGTGCTTTACGAT 60.028 45.455 0.00 0.00 42.00 3.73
676 677 2.346803 TCTGCCAAGTGCTTTACGATC 58.653 47.619 0.00 0.00 42.00 3.69
677 678 2.028112 TCTGCCAAGTGCTTTACGATCT 60.028 45.455 0.00 0.00 42.00 2.75
678 679 2.076100 TGCCAAGTGCTTTACGATCTG 58.924 47.619 0.00 0.00 42.00 2.90
679 680 2.076863 GCCAAGTGCTTTACGATCTGT 58.923 47.619 0.00 0.00 36.87 3.41
680 681 2.159653 GCCAAGTGCTTTACGATCTGTG 60.160 50.000 0.00 0.00 36.87 3.66
681 682 2.159653 CCAAGTGCTTTACGATCTGTGC 60.160 50.000 0.00 0.00 0.00 4.57
682 683 2.455674 AGTGCTTTACGATCTGTGCA 57.544 45.000 0.00 0.00 0.00 4.57
683 684 2.766313 AGTGCTTTACGATCTGTGCAA 58.234 42.857 0.00 0.00 29.90 4.08
684 685 3.338249 AGTGCTTTACGATCTGTGCAAT 58.662 40.909 0.00 0.00 29.90 3.56
685 686 3.753272 AGTGCTTTACGATCTGTGCAATT 59.247 39.130 0.00 0.00 29.90 2.32
686 687 4.935205 AGTGCTTTACGATCTGTGCAATTA 59.065 37.500 0.00 0.00 29.90 1.40
687 688 5.411361 AGTGCTTTACGATCTGTGCAATTAA 59.589 36.000 0.00 0.00 29.90 1.40
688 689 6.094048 AGTGCTTTACGATCTGTGCAATTAAT 59.906 34.615 0.00 0.00 29.90 1.40
689 690 6.412072 GTGCTTTACGATCTGTGCAATTAATC 59.588 38.462 0.00 0.00 29.90 1.75
690 691 5.909610 GCTTTACGATCTGTGCAATTAATCC 59.090 40.000 0.00 0.00 0.00 3.01
691 692 5.651172 TTACGATCTGTGCAATTAATCCG 57.349 39.130 0.00 0.00 0.00 4.18
692 693 3.792401 ACGATCTGTGCAATTAATCCGA 58.208 40.909 0.00 0.00 0.00 4.55
693 694 4.188462 ACGATCTGTGCAATTAATCCGAA 58.812 39.130 0.00 0.00 0.00 4.30
694 695 4.271049 ACGATCTGTGCAATTAATCCGAAG 59.729 41.667 0.00 0.00 0.00 3.79
706 707 2.594303 CCGAAGGCAGGCAACACA 60.594 61.111 0.00 0.00 46.14 3.72
707 708 1.973281 CCGAAGGCAGGCAACACAT 60.973 57.895 0.00 0.00 46.14 3.21
708 709 1.526575 CCGAAGGCAGGCAACACATT 61.527 55.000 0.00 0.00 46.14 2.71
709 710 0.109597 CGAAGGCAGGCAACACATTC 60.110 55.000 0.00 0.00 41.41 2.67
710 711 0.244721 GAAGGCAGGCAACACATTCC 59.755 55.000 0.00 0.00 41.41 3.01
711 712 1.526575 AAGGCAGGCAACACATTCCG 61.527 55.000 0.00 0.00 41.41 4.30
712 713 2.568090 GCAGGCAACACATTCCGG 59.432 61.111 0.00 0.00 41.41 5.14
713 714 1.971167 GCAGGCAACACATTCCGGA 60.971 57.895 0.00 0.00 41.41 5.14
714 715 1.875963 CAGGCAACACATTCCGGAC 59.124 57.895 1.83 0.00 41.41 4.79
715 716 1.671054 AGGCAACACATTCCGGACG 60.671 57.895 1.83 0.00 41.41 4.79
716 717 1.964373 GGCAACACATTCCGGACGT 60.964 57.895 1.83 0.50 0.00 4.34
717 718 1.512156 GGCAACACATTCCGGACGTT 61.512 55.000 1.83 2.40 0.00 3.99
718 719 0.110373 GCAACACATTCCGGACGTTC 60.110 55.000 1.83 0.00 0.00 3.95
719 720 0.162933 CAACACATTCCGGACGTTCG 59.837 55.000 9.95 9.95 0.00 3.95
720 721 0.032403 AACACATTCCGGACGTTCGA 59.968 50.000 20.12 0.00 0.00 3.71
721 722 0.388134 ACACATTCCGGACGTTCGAG 60.388 55.000 20.12 8.18 0.00 4.04
722 723 1.445582 ACATTCCGGACGTTCGAGC 60.446 57.895 20.12 0.00 0.00 5.03
723 724 1.445410 CATTCCGGACGTTCGAGCA 60.445 57.895 20.12 0.43 0.00 4.26
724 725 0.806102 CATTCCGGACGTTCGAGCAT 60.806 55.000 20.12 3.19 0.00 3.79
725 726 0.108329 ATTCCGGACGTTCGAGCATT 60.108 50.000 20.12 0.00 0.00 3.56
726 727 0.527113 TTCCGGACGTTCGAGCATTA 59.473 50.000 20.12 0.00 0.00 1.90
727 728 0.742505 TCCGGACGTTCGAGCATTAT 59.257 50.000 20.12 0.00 0.00 1.28
728 729 1.129326 CCGGACGTTCGAGCATTATC 58.871 55.000 20.12 0.00 0.00 1.75
729 730 0.770590 CGGACGTTCGAGCATTATCG 59.229 55.000 11.86 0.00 44.07 2.92
730 731 1.836383 GGACGTTCGAGCATTATCGT 58.164 50.000 0.00 0.00 43.20 3.73
731 732 2.190981 GGACGTTCGAGCATTATCGTT 58.809 47.619 0.00 0.00 43.20 3.85
732 733 2.601763 GGACGTTCGAGCATTATCGTTT 59.398 45.455 0.00 0.00 43.20 3.60
733 734 3.301643 GGACGTTCGAGCATTATCGTTTC 60.302 47.826 0.00 0.00 43.20 2.78
734 735 2.601763 ACGTTCGAGCATTATCGTTTCC 59.398 45.455 0.00 0.00 43.20 3.13
735 736 2.034001 CGTTCGAGCATTATCGTTTCCC 60.034 50.000 0.00 0.00 43.20 3.97
956 958 2.224209 CGAAACCCTAAGTCACCACACT 60.224 50.000 0.00 0.00 0.00 3.55
1059 1071 0.449388 CAATCTCGCCTGTTTGCCTC 59.551 55.000 0.00 0.00 0.00 4.70
1077 1089 0.949397 TCCTCGCACGTATTATCGCT 59.051 50.000 0.00 0.00 0.00 4.93
1332 1543 1.344438 CCTTCTACGATGCCATGGCTA 59.656 52.381 35.53 22.71 42.51 3.93
1436 1653 2.550606 TGTGCGTGGAAAATGTACCTTC 59.449 45.455 0.00 0.00 29.85 3.46
1448 1665 5.470047 AATGTACCTTCTTCTGTCTCGTT 57.530 39.130 0.00 0.00 0.00 3.85
1468 1685 8.092687 TCTCGTTGAAGCTAGGTTTAGTTTTAT 58.907 33.333 8.87 0.00 31.43 1.40
1597 2012 4.503741 ACAGCTTTCGTTAATTGCACAT 57.496 36.364 0.00 0.00 0.00 3.21
1664 2083 1.008538 GAAACTTGTGTGGCGCTGG 60.009 57.895 7.64 0.00 0.00 4.85
1739 2193 6.478673 CACTCAAGTATGTTCAATATACGCCA 59.521 38.462 0.00 0.00 36.40 5.69
1740 2194 6.479001 ACTCAAGTATGTTCAATATACGCCAC 59.521 38.462 0.00 0.00 36.40 5.01
1745 2199 5.734855 ATGTTCAATATACGCCACAAGTC 57.265 39.130 0.00 0.00 0.00 3.01
1749 2203 2.135664 ATATACGCCACAAGTCGCTC 57.864 50.000 0.00 0.00 0.00 5.03
1775 2230 5.870978 GGTTTATACTAACTCGTGAAGGCAA 59.129 40.000 0.00 0.00 0.00 4.52
1777 2232 7.065443 GGTTTATACTAACTCGTGAAGGCAATT 59.935 37.037 0.00 0.00 0.00 2.32
1787 2242 6.823689 ACTCGTGAAGGCAATTGATATTACTT 59.176 34.615 10.34 2.94 0.00 2.24
1931 2446 5.046807 TGTTTTCCCTTAGCTGACTACCTAC 60.047 44.000 0.00 0.00 0.00 3.18
2027 2544 3.031013 GGGTATTGTTTATGGCAAGCCT 58.969 45.455 12.96 0.65 36.94 4.58
2278 2803 4.137543 ACTTTGAGGTCATCCTTGTTGAC 58.862 43.478 0.00 0.00 45.24 3.18
2495 3020 2.034001 CGCTACCGTTAAGCTTATGTGC 60.034 50.000 7.08 10.05 37.85 4.57
2531 3056 1.596496 ACCTGCCCTATGCTTACCTT 58.404 50.000 0.00 0.00 42.00 3.50
2534 3059 2.107204 CCTGCCCTATGCTTACCTTGAT 59.893 50.000 0.00 0.00 42.00 2.57
2585 3117 0.868406 CTTCGTTCTGTGGCTGAACC 59.132 55.000 11.41 0.00 38.49 3.62
2632 3164 2.632377 CTATGTGCCTGTGTTACCTGG 58.368 52.381 0.00 0.00 0.00 4.45
2646 3178 6.128035 TGTGTTACCTGGAATTCGAATGATTG 60.128 38.462 12.25 3.21 0.00 2.67
2657 3189 7.042389 GGAATTCGAATGATTGAAGTAGTCCTC 60.042 40.741 12.25 0.00 32.46 3.71
2736 3269 6.993079 TCTTCAGTTATCGGTGTGCATATAT 58.007 36.000 0.00 0.00 0.00 0.86
2773 3306 9.768662 ATAAAATGTCAAAATTTGAAGCTCTGT 57.231 25.926 10.27 0.00 42.15 3.41
2776 3309 7.704789 ATGTCAAAATTTGAAGCTCTGTTTC 57.295 32.000 10.27 0.00 42.15 2.78
2778 3311 7.995289 TGTCAAAATTTGAAGCTCTGTTTCTA 58.005 30.769 10.27 0.00 42.15 2.10
2779 3312 8.465999 TGTCAAAATTTGAAGCTCTGTTTCTAA 58.534 29.630 10.27 0.00 42.15 2.10
2780 3313 8.962111 GTCAAAATTTGAAGCTCTGTTTCTAAG 58.038 33.333 10.27 0.00 42.15 2.18
2782 3315 9.305925 CAAAATTTGAAGCTCTGTTTCTAAGTT 57.694 29.630 0.00 0.00 31.12 2.66
2783 3316 9.521503 AAAATTTGAAGCTCTGTTTCTAAGTTC 57.478 29.630 0.00 0.00 29.55 3.01
2784 3317 8.457238 AATTTGAAGCTCTGTTTCTAAGTTCT 57.543 30.769 0.00 0.00 0.00 3.01
2785 3318 6.851222 TTGAAGCTCTGTTTCTAAGTTCTG 57.149 37.500 0.00 0.00 0.00 3.02
2786 3319 4.752101 TGAAGCTCTGTTTCTAAGTTCTGC 59.248 41.667 0.00 0.00 0.00 4.26
2787 3320 4.342862 AGCTCTGTTTCTAAGTTCTGCA 57.657 40.909 0.00 0.00 0.00 4.41
2790 3323 5.011125 AGCTCTGTTTCTAAGTTCTGCACTA 59.989 40.000 0.00 0.00 32.94 2.74
2801 3334 8.349983 TCTAAGTTCTGCACTATTTGGTTTTTC 58.650 33.333 0.00 0.00 32.94 2.29
2813 3346 4.335400 TTGGTTTTTCCATGAGCCTTTC 57.665 40.909 0.00 0.00 46.60 2.62
2820 3354 0.541863 CCATGAGCCTTTCGTACCCT 59.458 55.000 0.00 0.00 0.00 4.34
2822 3356 2.169769 CCATGAGCCTTTCGTACCCTTA 59.830 50.000 0.00 0.00 0.00 2.69
2833 3367 4.758773 TCGTACCCTTAAAATCGGGAAT 57.241 40.909 4.57 0.00 43.44 3.01
2835 3369 4.877251 TCGTACCCTTAAAATCGGGAATTG 59.123 41.667 4.57 0.00 43.44 2.32
2836 3370 4.637091 CGTACCCTTAAAATCGGGAATTGT 59.363 41.667 4.57 0.00 43.44 2.71
2837 3371 5.220719 CGTACCCTTAAAATCGGGAATTGTC 60.221 44.000 4.57 0.00 43.44 3.18
2838 3372 4.668636 ACCCTTAAAATCGGGAATTGTCA 58.331 39.130 4.57 0.00 43.44 3.58
2839 3373 5.269189 ACCCTTAAAATCGGGAATTGTCAT 58.731 37.500 4.57 0.00 43.44 3.06
2840 3374 5.127031 ACCCTTAAAATCGGGAATTGTCATG 59.873 40.000 4.57 0.00 43.44 3.07
2841 3375 5.359576 CCCTTAAAATCGGGAATTGTCATGA 59.640 40.000 0.00 0.00 43.44 3.07
2842 3376 6.265577 CCTTAAAATCGGGAATTGTCATGAC 58.734 40.000 19.27 19.27 0.00 3.06
2843 3377 6.127758 CCTTAAAATCGGGAATTGTCATGACA 60.128 38.462 24.56 24.56 39.98 3.58
2857 3391 4.634004 TGTCATGACAACCTAAATTAGCGG 59.366 41.667 26.02 0.00 38.56 5.52
2858 3392 4.634443 GTCATGACAACCTAAATTAGCGGT 59.366 41.667 21.07 0.00 0.00 5.68
2859 3393 5.813672 GTCATGACAACCTAAATTAGCGGTA 59.186 40.000 21.07 0.00 0.00 4.02
2860 3394 5.813672 TCATGACAACCTAAATTAGCGGTAC 59.186 40.000 0.00 0.00 0.00 3.34
2883 3724 0.402566 AGCAGGAGGGGAATAGCCAT 60.403 55.000 0.00 0.00 38.95 4.40
2903 3744 4.437390 CCATTGGCATCGTCTTTTAGACAC 60.437 45.833 7.52 0.00 45.30 3.67
2904 3745 2.695359 TGGCATCGTCTTTTAGACACC 58.305 47.619 7.52 3.74 45.30 4.16
2907 3748 2.599082 GCATCGTCTTTTAGACACCGAG 59.401 50.000 7.52 0.00 45.30 4.63
2908 3749 3.672511 GCATCGTCTTTTAGACACCGAGA 60.673 47.826 7.52 0.00 45.30 4.04
2909 3750 3.549299 TCGTCTTTTAGACACCGAGAC 57.451 47.619 7.52 0.00 45.30 3.36
2922 3771 4.500116 GAGACGAGGTGGAGGCGC 62.500 72.222 0.00 0.00 0.00 6.53
2929 3778 2.279517 GGTGGAGGCGCGATACTG 60.280 66.667 12.10 0.00 0.00 2.74
2930 3779 2.782222 GGTGGAGGCGCGATACTGA 61.782 63.158 12.10 0.00 0.00 3.41
2935 3784 2.088674 GAGGCGCGATACTGATGGGT 62.089 60.000 12.10 0.00 0.00 4.51
2937 3786 0.032952 GGCGCGATACTGATGGGTTA 59.967 55.000 12.10 0.00 0.00 2.85
2966 4210 1.200483 CGGTGAGCAGCGTACAATAG 58.800 55.000 13.32 0.00 46.01 1.73
2968 4212 2.734175 CGGTGAGCAGCGTACAATAGAA 60.734 50.000 13.32 0.00 46.01 2.10
2970 4214 2.860735 GTGAGCAGCGTACAATAGAAGG 59.139 50.000 0.00 0.00 0.00 3.46
3000 4244 1.617850 CATCTAGCTACTGCCCTGAGG 59.382 57.143 0.00 0.00 40.80 3.86
3006 4251 1.994507 CTACTGCCCTGAGGACGACG 61.995 65.000 0.00 0.00 33.47 5.12
3025 4270 4.629065 GACGCACGACTCTAAAATCAAAG 58.371 43.478 0.00 0.00 0.00 2.77
3077 4322 3.444703 AGATGTATGTGCGTCTCTTCC 57.555 47.619 0.00 0.00 29.39 3.46
3111 4356 3.368495 CTTTGTTTAAAGTGGGCGTCAC 58.632 45.455 0.00 0.00 46.39 3.67
3152 4397 2.083774 AGGACGGTATGTGCATGTTTG 58.916 47.619 0.00 0.00 42.22 2.93
3182 4427 9.582431 TTTAAAAAGATACATAGAGTCCTCGTG 57.418 33.333 0.00 2.53 34.09 4.35
3191 4436 7.171630 ACATAGAGTCCTCGTGTCTAAAAAT 57.828 36.000 3.54 0.00 31.18 1.82
3215 4473 6.884280 ATCCTCACCTTCACAAAGTAAAAG 57.116 37.500 0.00 0.00 0.00 2.27
3286 4546 2.160721 GGTCCTCACCTCCATGTAGA 57.839 55.000 0.00 0.00 40.00 2.59
3287 4547 2.035632 GGTCCTCACCTCCATGTAGAG 58.964 57.143 0.00 0.00 40.00 2.43
3288 4548 2.358300 GGTCCTCACCTCCATGTAGAGA 60.358 54.545 0.93 0.00 40.00 3.10
3289 4549 3.366396 GTCCTCACCTCCATGTAGAGAA 58.634 50.000 0.93 0.00 35.82 2.87
3290 4550 3.769844 GTCCTCACCTCCATGTAGAGAAA 59.230 47.826 0.93 0.00 35.82 2.52
3291 4551 4.223032 GTCCTCACCTCCATGTAGAGAAAA 59.777 45.833 0.93 0.00 35.82 2.29
3292 4552 5.032846 TCCTCACCTCCATGTAGAGAAAAT 58.967 41.667 0.93 0.00 35.82 1.82
3293 4553 6.098409 GTCCTCACCTCCATGTAGAGAAAATA 59.902 42.308 0.93 0.00 35.82 1.40
3294 4554 6.098409 TCCTCACCTCCATGTAGAGAAAATAC 59.902 42.308 0.93 0.00 35.82 1.89
3295 4555 6.127054 CCTCACCTCCATGTAGAGAAAATACA 60.127 42.308 0.93 0.00 37.53 2.29
3299 4559 9.613428 CACCTCCATGTAGAGAAAATACATTTA 57.387 33.333 0.93 0.00 40.92 1.40
3300 4560 9.614792 ACCTCCATGTAGAGAAAATACATTTAC 57.385 33.333 0.93 0.00 40.92 2.01
3350 4611 4.864704 ATTCCAAAAGTTTACATGCCGT 57.135 36.364 0.00 0.00 0.00 5.68
3352 4613 3.215151 TCCAAAAGTTTACATGCCGTGA 58.785 40.909 0.00 0.00 0.00 4.35
3376 4678 1.131126 CACGCAGCTTAATGGGTTGAG 59.869 52.381 0.00 0.00 43.09 3.02
3392 4694 1.612676 TGAGCTGCTGTGAAAATGCT 58.387 45.000 7.01 0.00 0.00 3.79
3393 4695 1.268625 TGAGCTGCTGTGAAAATGCTG 59.731 47.619 7.01 0.00 0.00 4.41
3402 4713 2.157738 GTGAAAATGCTGAGCTGGAGT 58.842 47.619 5.83 0.00 0.00 3.85
3437 4759 4.247267 ACTGCAGATTTGGTTGTGAATG 57.753 40.909 23.35 0.00 0.00 2.67
3438 4760 2.991190 CTGCAGATTTGGTTGTGAATGC 59.009 45.455 8.42 0.00 0.00 3.56
3439 4761 2.288948 TGCAGATTTGGTTGTGAATGCC 60.289 45.455 0.00 0.00 0.00 4.40
3441 4763 1.901833 AGATTTGGTTGTGAATGCCCC 59.098 47.619 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 125 1.304547 CCTCCTGGAGGTCGTCAGT 60.305 63.158 30.91 0.00 44.25 3.41
164 165 3.322466 AAGGTGAGGTCTGGCCGG 61.322 66.667 4.71 4.71 43.70 6.13
165 166 2.046892 CAAGGTGAGGTCTGGCCG 60.047 66.667 0.00 0.00 43.70 6.13
166 167 2.360475 GCAAGGTGAGGTCTGGCC 60.360 66.667 0.00 0.00 37.58 5.36
167 168 2.360475 GGCAAGGTGAGGTCTGGC 60.360 66.667 0.00 0.00 0.00 4.85
168 169 2.046892 CGGCAAGGTGAGGTCTGG 60.047 66.667 0.00 0.00 0.00 3.86
169 170 1.669115 CACGGCAAGGTGAGGTCTG 60.669 63.158 0.00 0.00 40.38 3.51
170 171 2.743718 CACGGCAAGGTGAGGTCT 59.256 61.111 0.00 0.00 40.38 3.85
171 172 3.050275 GCACGGCAAGGTGAGGTC 61.050 66.667 6.04 0.00 40.38 3.85
172 173 4.643387 GGCACGGCAAGGTGAGGT 62.643 66.667 6.04 0.00 40.38 3.85
174 175 3.850098 AAGGGCACGGCAAGGTGAG 62.850 63.158 6.04 0.00 40.38 3.51
175 176 3.429372 AAAGGGCACGGCAAGGTGA 62.429 57.895 6.04 0.00 40.38 4.02
176 177 2.912025 AAAGGGCACGGCAAGGTG 60.912 61.111 0.00 0.00 40.89 4.00
177 178 2.912025 CAAAGGGCACGGCAAGGT 60.912 61.111 0.00 0.00 0.00 3.50
178 179 2.597217 TCAAAGGGCACGGCAAGG 60.597 61.111 0.00 0.00 0.00 3.61
179 180 2.133742 CTGTCAAAGGGCACGGCAAG 62.134 60.000 0.00 0.00 0.00 4.01
180 181 2.124109 TGTCAAAGGGCACGGCAA 60.124 55.556 0.00 0.00 0.00 4.52
181 182 2.594303 CTGTCAAAGGGCACGGCA 60.594 61.111 0.00 0.00 0.00 5.69
182 183 3.365265 CCTGTCAAAGGGCACGGC 61.365 66.667 0.00 0.00 43.15 5.68
190 191 1.078848 CGGGAGGAGCCTGTCAAAG 60.079 63.158 0.00 0.00 38.31 2.77
191 192 3.068881 CGGGAGGAGCCTGTCAAA 58.931 61.111 0.00 0.00 38.31 2.69
192 193 3.706373 GCGGGAGGAGCCTGTCAA 61.706 66.667 0.00 0.00 45.49 3.18
210 211 3.775654 GAGGGGGACAGCAGACGG 61.776 72.222 0.00 0.00 0.00 4.79
211 212 4.135153 CGAGGGGGACAGCAGACG 62.135 72.222 0.00 0.00 0.00 4.18
212 213 4.459089 GCGAGGGGGACAGCAGAC 62.459 72.222 0.00 0.00 0.00 3.51
217 218 3.787001 GAAGGGCGAGGGGGACAG 61.787 72.222 0.00 0.00 0.00 3.51
220 221 3.605412 TAACGAAGGGCGAGGGGGA 62.605 63.158 0.00 0.00 44.57 4.81
221 222 3.078836 TAACGAAGGGCGAGGGGG 61.079 66.667 0.00 0.00 44.57 5.40
222 223 2.186125 GTAACGAAGGGCGAGGGG 59.814 66.667 0.00 0.00 44.57 4.79
223 224 2.202703 CGTAACGAAGGGCGAGGG 60.203 66.667 0.00 0.00 44.57 4.30
224 225 1.515736 GACGTAACGAAGGGCGAGG 60.516 63.158 0.00 0.00 44.57 4.63
225 226 4.068302 GACGTAACGAAGGGCGAG 57.932 61.111 0.00 0.00 44.57 5.03
228 229 1.069378 CTGACGACGTAACGAAGGGC 61.069 60.000 0.00 0.00 37.03 5.19
229 230 0.518636 TCTGACGACGTAACGAAGGG 59.481 55.000 0.00 0.00 37.03 3.95
230 231 2.096069 TCTTCTGACGACGTAACGAAGG 60.096 50.000 22.41 11.53 37.03 3.46
231 232 3.154489 CTCTTCTGACGACGTAACGAAG 58.846 50.000 19.30 19.30 37.03 3.79
232 233 2.545526 ACTCTTCTGACGACGTAACGAA 59.454 45.455 0.00 3.30 37.03 3.85
233 234 2.096565 CACTCTTCTGACGACGTAACGA 60.097 50.000 0.00 0.00 37.03 3.85
234 235 2.231693 CACTCTTCTGACGACGTAACG 58.768 52.381 0.00 0.00 39.31 3.18
235 236 1.977412 GCACTCTTCTGACGACGTAAC 59.023 52.381 0.00 0.00 0.00 2.50
236 237 1.068748 GGCACTCTTCTGACGACGTAA 60.069 52.381 0.00 0.00 0.00 3.18
237 238 0.520404 GGCACTCTTCTGACGACGTA 59.480 55.000 0.00 0.00 0.00 3.57
238 239 1.286260 GGCACTCTTCTGACGACGT 59.714 57.895 0.00 0.00 0.00 4.34
239 240 1.444553 GGGCACTCTTCTGACGACG 60.445 63.158 0.00 0.00 0.00 5.12
240 241 1.444553 CGGGCACTCTTCTGACGAC 60.445 63.158 0.00 0.00 0.00 4.34
241 242 2.636412 CCGGGCACTCTTCTGACGA 61.636 63.158 0.00 0.00 0.00 4.20
242 243 2.125912 CCGGGCACTCTTCTGACG 60.126 66.667 0.00 0.00 0.00 4.35
243 244 2.266055 CCCGGGCACTCTTCTGAC 59.734 66.667 8.08 0.00 0.00 3.51
244 245 3.706373 GCCCGGGCACTCTTCTGA 61.706 66.667 40.73 0.00 41.49 3.27
247 248 4.821589 CTCGCCCGGGCACTCTTC 62.822 72.222 42.78 14.31 42.06 2.87
267 268 0.827925 AGAGGTCTTGACTGGCGACA 60.828 55.000 0.00 0.00 39.59 4.35
268 269 0.109039 GAGAGGTCTTGACTGGCGAC 60.109 60.000 0.61 0.00 0.00 5.19
269 270 1.251527 GGAGAGGTCTTGACTGGCGA 61.252 60.000 0.61 0.00 0.00 5.54
270 271 1.216710 GGAGAGGTCTTGACTGGCG 59.783 63.158 0.61 0.00 0.00 5.69
271 272 0.534873 GAGGAGAGGTCTTGACTGGC 59.465 60.000 0.61 0.00 0.00 4.85
272 273 0.814457 CGAGGAGAGGTCTTGACTGG 59.186 60.000 0.61 0.00 0.00 4.00
273 274 0.172352 GCGAGGAGAGGTCTTGACTG 59.828 60.000 0.61 0.00 0.00 3.51
274 275 0.968393 GGCGAGGAGAGGTCTTGACT 60.968 60.000 0.61 0.00 0.00 3.41
275 276 1.513622 GGCGAGGAGAGGTCTTGAC 59.486 63.158 0.00 0.00 0.00 3.18
276 277 2.046864 CGGCGAGGAGAGGTCTTGA 61.047 63.158 0.00 0.00 0.00 3.02
277 278 2.492090 CGGCGAGGAGAGGTCTTG 59.508 66.667 0.00 0.00 0.00 3.02
278 279 3.453679 GCGGCGAGGAGAGGTCTT 61.454 66.667 12.98 0.00 0.00 3.01
301 302 2.649034 GAGGAGTTGTCGCGGACA 59.351 61.111 6.13 6.79 41.09 4.02
302 303 2.504244 CGAGGAGTTGTCGCGGAC 60.504 66.667 6.13 3.78 0.00 4.79
303 304 2.974489 GACGAGGAGTTGTCGCGGA 61.974 63.158 6.13 0.00 41.26 5.54
304 305 2.504244 GACGAGGAGTTGTCGCGG 60.504 66.667 6.13 0.00 41.26 6.46
305 306 2.081212 GTGACGAGGAGTTGTCGCG 61.081 63.158 0.00 0.00 39.72 5.87
306 307 1.733399 GGTGACGAGGAGTTGTCGC 60.733 63.158 0.00 0.00 44.16 5.19
307 308 1.080705 GGGTGACGAGGAGTTGTCG 60.081 63.158 0.00 0.00 39.72 4.35
308 309 0.319641 GTGGGTGACGAGGAGTTGTC 60.320 60.000 0.00 0.00 37.58 3.18
309 310 1.746517 GTGGGTGACGAGGAGTTGT 59.253 57.895 0.00 0.00 0.00 3.32
310 311 1.004918 GGTGGGTGACGAGGAGTTG 60.005 63.158 0.00 0.00 0.00 3.16
311 312 2.571216 CGGTGGGTGACGAGGAGTT 61.571 63.158 0.00 0.00 0.00 3.01
312 313 2.989824 CGGTGGGTGACGAGGAGT 60.990 66.667 0.00 0.00 0.00 3.85
313 314 2.989824 ACGGTGGGTGACGAGGAG 60.990 66.667 0.00 0.00 0.00 3.69
314 315 2.987547 GACGGTGGGTGACGAGGA 60.988 66.667 0.00 0.00 0.00 3.71
315 316 4.415332 CGACGGTGGGTGACGAGG 62.415 72.222 0.00 0.00 0.00 4.63
316 317 3.606065 GACGACGGTGGGTGACGAG 62.606 68.421 0.00 0.00 0.00 4.18
317 318 3.663176 GACGACGGTGGGTGACGA 61.663 66.667 0.00 0.00 0.00 4.20
318 319 4.712425 GGACGACGGTGGGTGACG 62.712 72.222 0.00 0.00 0.00 4.35
319 320 3.608662 TGGACGACGGTGGGTGAC 61.609 66.667 0.00 0.00 0.00 3.67
320 321 3.608662 GTGGACGACGGTGGGTGA 61.609 66.667 0.00 0.00 0.00 4.02
321 322 1.879737 TATGTGGACGACGGTGGGTG 61.880 60.000 0.00 0.00 0.00 4.61
322 323 1.186917 TTATGTGGACGACGGTGGGT 61.187 55.000 0.00 0.00 0.00 4.51
323 324 0.177141 ATTATGTGGACGACGGTGGG 59.823 55.000 0.00 0.00 0.00 4.61
324 325 2.018542 AATTATGTGGACGACGGTGG 57.981 50.000 0.00 0.00 0.00 4.61
325 326 2.350498 GGAAATTATGTGGACGACGGTG 59.650 50.000 0.00 0.00 0.00 4.94
326 327 2.027929 TGGAAATTATGTGGACGACGGT 60.028 45.455 0.00 0.00 0.00 4.83
327 328 2.607635 CTGGAAATTATGTGGACGACGG 59.392 50.000 0.00 0.00 0.00 4.79
328 329 3.259064 ACTGGAAATTATGTGGACGACG 58.741 45.455 0.00 0.00 0.00 5.12
329 330 4.092968 GTGACTGGAAATTATGTGGACGAC 59.907 45.833 0.00 0.00 0.00 4.34
330 331 4.250464 GTGACTGGAAATTATGTGGACGA 58.750 43.478 0.00 0.00 0.00 4.20
331 332 3.374058 GGTGACTGGAAATTATGTGGACG 59.626 47.826 0.00 0.00 0.00 4.79
332 333 3.694566 GGGTGACTGGAAATTATGTGGAC 59.305 47.826 0.00 0.00 0.00 4.02
333 334 3.591527 AGGGTGACTGGAAATTATGTGGA 59.408 43.478 0.00 0.00 0.00 4.02
334 335 3.947834 GAGGGTGACTGGAAATTATGTGG 59.052 47.826 0.00 0.00 0.00 4.17
335 336 4.637534 CAGAGGGTGACTGGAAATTATGTG 59.362 45.833 0.00 0.00 0.00 3.21
336 337 4.848357 CAGAGGGTGACTGGAAATTATGT 58.152 43.478 0.00 0.00 0.00 2.29
337 338 3.629398 GCAGAGGGTGACTGGAAATTATG 59.371 47.826 0.00 0.00 36.09 1.90
338 339 3.372025 GGCAGAGGGTGACTGGAAATTAT 60.372 47.826 0.00 0.00 36.09 1.28
339 340 2.026262 GGCAGAGGGTGACTGGAAATTA 60.026 50.000 0.00 0.00 36.09 1.40
340 341 1.272147 GGCAGAGGGTGACTGGAAATT 60.272 52.381 0.00 0.00 36.09 1.82
341 342 0.329596 GGCAGAGGGTGACTGGAAAT 59.670 55.000 0.00 0.00 36.09 2.17
342 343 1.761174 GGCAGAGGGTGACTGGAAA 59.239 57.895 0.00 0.00 36.09 3.13
343 344 2.583441 CGGCAGAGGGTGACTGGAA 61.583 63.158 0.00 0.00 36.09 3.53
344 345 2.997315 CGGCAGAGGGTGACTGGA 60.997 66.667 0.00 0.00 36.09 3.86
345 346 4.767255 GCGGCAGAGGGTGACTGG 62.767 72.222 0.00 0.00 36.09 4.00
346 347 4.767255 GGCGGCAGAGGGTGACTG 62.767 72.222 3.07 0.00 38.27 3.51
362 363 3.151022 GAGTCCTGGAGGCGAGGG 61.151 72.222 0.00 0.00 34.44 4.30
363 364 3.151022 GGAGTCCTGGAGGCGAGG 61.151 72.222 0.41 0.00 34.44 4.63
364 365 3.522731 CGGAGTCCTGGAGGCGAG 61.523 72.222 7.77 0.00 34.44 5.03
367 368 3.844090 GAGCGGAGTCCTGGAGGC 61.844 72.222 7.77 2.50 34.44 4.70
368 369 3.151022 GGAGCGGAGTCCTGGAGG 61.151 72.222 7.77 0.00 33.30 4.30
369 370 2.363018 TGGAGCGGAGTCCTGGAG 60.363 66.667 7.77 0.00 37.52 3.86
370 371 2.680352 GTGGAGCGGAGTCCTGGA 60.680 66.667 7.77 0.00 37.52 3.86
371 372 4.135153 CGTGGAGCGGAGTCCTGG 62.135 72.222 7.77 0.00 37.52 4.45
372 373 3.062466 TCGTGGAGCGGAGTCCTG 61.062 66.667 7.77 2.01 41.72 3.86
373 374 3.063084 GTCGTGGAGCGGAGTCCT 61.063 66.667 7.77 0.00 41.72 3.85
374 375 4.131088 GGTCGTGGAGCGGAGTCC 62.131 72.222 0.00 0.00 41.72 3.85
375 376 4.131088 GGGTCGTGGAGCGGAGTC 62.131 72.222 0.00 0.00 41.72 3.36
376 377 4.680537 AGGGTCGTGGAGCGGAGT 62.681 66.667 0.00 0.00 41.72 3.85
377 378 3.827898 GAGGGTCGTGGAGCGGAG 61.828 72.222 0.00 0.00 41.72 4.63
378 379 4.671590 TGAGGGTCGTGGAGCGGA 62.672 66.667 0.00 0.00 41.72 5.54
379 380 4.436998 GTGAGGGTCGTGGAGCGG 62.437 72.222 0.00 0.00 41.72 5.52
380 381 4.436998 GGTGAGGGTCGTGGAGCG 62.437 72.222 0.00 0.00 43.01 5.03
381 382 3.311110 TGGTGAGGGTCGTGGAGC 61.311 66.667 0.00 0.00 0.00 4.70
382 383 2.657237 GTGGTGAGGGTCGTGGAG 59.343 66.667 0.00 0.00 0.00 3.86
383 384 3.299977 CGTGGTGAGGGTCGTGGA 61.300 66.667 0.00 0.00 0.00 4.02
392 393 4.717629 TCGAAGCGGCGTGGTGAG 62.718 66.667 9.37 0.00 0.00 3.51
393 394 4.717629 CTCGAAGCGGCGTGGTGA 62.718 66.667 9.37 1.11 0.00 4.02
423 424 1.932011 TTTTGCGCCGATGGTGGATG 61.932 55.000 4.18 0.00 32.75 3.51
424 425 1.037030 ATTTTGCGCCGATGGTGGAT 61.037 50.000 4.18 0.00 32.75 3.41
425 426 0.393132 TATTTTGCGCCGATGGTGGA 60.393 50.000 4.18 0.00 33.18 4.02
426 427 0.029300 CTATTTTGCGCCGATGGTGG 59.971 55.000 4.18 0.00 33.18 4.61
427 428 0.029300 CCTATTTTGCGCCGATGGTG 59.971 55.000 4.18 0.00 36.10 4.17
428 429 0.107410 TCCTATTTTGCGCCGATGGT 60.107 50.000 4.18 0.00 0.00 3.55
429 430 1.238439 ATCCTATTTTGCGCCGATGG 58.762 50.000 4.18 0.00 0.00 3.51
430 431 2.662791 CGAATCCTATTTTGCGCCGATG 60.663 50.000 4.18 0.00 0.00 3.84
431 432 1.531149 CGAATCCTATTTTGCGCCGAT 59.469 47.619 4.18 0.00 0.00 4.18
432 433 0.934496 CGAATCCTATTTTGCGCCGA 59.066 50.000 4.18 0.00 0.00 5.54
433 434 0.657368 GCGAATCCTATTTTGCGCCG 60.657 55.000 4.18 0.00 38.67 6.46
434 435 3.164028 GCGAATCCTATTTTGCGCC 57.836 52.632 4.18 0.00 38.67 6.53
435 436 0.657368 CGGCGAATCCTATTTTGCGC 60.657 55.000 0.00 0.00 43.27 6.09
436 437 0.041312 CCGGCGAATCCTATTTTGCG 60.041 55.000 9.30 0.00 36.95 4.85
437 438 1.264288 CTCCGGCGAATCCTATTTTGC 59.736 52.381 9.30 0.00 35.60 3.68
438 439 1.264288 GCTCCGGCGAATCCTATTTTG 59.736 52.381 9.30 0.00 0.00 2.44
439 440 1.594331 GCTCCGGCGAATCCTATTTT 58.406 50.000 9.30 0.00 0.00 1.82
440 441 0.250338 GGCTCCGGCGAATCCTATTT 60.250 55.000 9.30 0.00 39.81 1.40
441 442 1.371558 GGCTCCGGCGAATCCTATT 59.628 57.895 9.30 0.00 39.81 1.73
442 443 3.060866 GGCTCCGGCGAATCCTAT 58.939 61.111 9.30 0.00 39.81 2.57
452 453 4.363990 ATAGCGCATCGGCTCCGG 62.364 66.667 11.47 0.00 43.54 5.14
453 454 3.108289 CATAGCGCATCGGCTCCG 61.108 66.667 11.47 1.14 43.54 4.63
454 455 1.735920 CTCATAGCGCATCGGCTCC 60.736 63.158 11.47 0.00 43.54 4.70
455 456 1.006314 GTCTCATAGCGCATCGGCTC 61.006 60.000 11.47 0.00 43.54 4.70
456 457 1.006805 GTCTCATAGCGCATCGGCT 60.007 57.895 11.47 0.00 46.88 5.52
457 458 2.368105 CGTCTCATAGCGCATCGGC 61.368 63.158 11.47 0.00 0.00 5.54
458 459 3.834350 CGTCTCATAGCGCATCGG 58.166 61.111 11.47 0.00 0.00 4.18
464 465 4.569023 TGCGGGCGTCTCATAGCG 62.569 66.667 0.00 0.00 0.00 4.26
465 466 2.659897 CTGCGGGCGTCTCATAGC 60.660 66.667 0.00 0.00 0.00 2.97
466 467 2.659897 GCTGCGGGCGTCTCATAG 60.660 66.667 0.00 0.00 0.00 2.23
478 479 2.969238 CCTATCCTTGCCGCTGCG 60.969 66.667 16.34 16.34 41.78 5.18
479 480 1.596477 CTCCTATCCTTGCCGCTGC 60.596 63.158 0.00 0.00 38.26 5.25
480 481 0.033228 CTCTCCTATCCTTGCCGCTG 59.967 60.000 0.00 0.00 0.00 5.18
481 482 1.118356 CCTCTCCTATCCTTGCCGCT 61.118 60.000 0.00 0.00 0.00 5.52
482 483 1.369321 CCTCTCCTATCCTTGCCGC 59.631 63.158 0.00 0.00 0.00 6.53
483 484 2.053618 CCCTCTCCTATCCTTGCCG 58.946 63.158 0.00 0.00 0.00 5.69
484 485 1.757949 GCCCTCTCCTATCCTTGCC 59.242 63.158 0.00 0.00 0.00 4.52
485 486 1.369321 CGCCCTCTCCTATCCTTGC 59.631 63.158 0.00 0.00 0.00 4.01
486 487 0.470080 TCCGCCCTCTCCTATCCTTG 60.470 60.000 0.00 0.00 0.00 3.61
487 488 0.178947 CTCCGCCCTCTCCTATCCTT 60.179 60.000 0.00 0.00 0.00 3.36
488 489 1.462928 CTCCGCCCTCTCCTATCCT 59.537 63.158 0.00 0.00 0.00 3.24
489 490 2.279810 GCTCCGCCCTCTCCTATCC 61.280 68.421 0.00 0.00 0.00 2.59
490 491 2.279810 GGCTCCGCCCTCTCCTATC 61.280 68.421 0.00 0.00 44.06 2.08
491 492 2.203714 GGCTCCGCCCTCTCCTAT 60.204 66.667 0.00 0.00 44.06 2.57
525 526 3.330720 CTGGTCCACCTCCCCACC 61.331 72.222 0.00 0.00 36.82 4.61
526 527 3.330720 CCTGGTCCACCTCCCCAC 61.331 72.222 0.00 0.00 36.82 4.61
527 528 3.864983 GACCTGGTCCACCTCCCCA 62.865 68.421 16.14 0.00 36.82 4.96
528 529 3.009714 GACCTGGTCCACCTCCCC 61.010 72.222 16.14 0.00 36.82 4.81
529 530 3.391382 CGACCTGGTCCACCTCCC 61.391 72.222 20.68 0.00 36.82 4.30
530 531 3.391382 CCGACCTGGTCCACCTCC 61.391 72.222 20.68 0.00 36.82 4.30
531 532 2.283676 TCCGACCTGGTCCACCTC 60.284 66.667 20.68 0.00 39.52 3.85
532 533 2.283966 CTCCGACCTGGTCCACCT 60.284 66.667 20.68 0.00 39.52 4.00
533 534 1.889530 CTTCTCCGACCTGGTCCACC 61.890 65.000 20.68 0.00 39.52 4.61
534 535 0.898789 TCTTCTCCGACCTGGTCCAC 60.899 60.000 20.68 0.00 39.52 4.02
535 536 0.041238 ATCTTCTCCGACCTGGTCCA 59.959 55.000 20.68 7.08 39.52 4.02
536 537 0.461961 CATCTTCTCCGACCTGGTCC 59.538 60.000 20.68 3.91 39.52 4.46
537 538 0.461961 CCATCTTCTCCGACCTGGTC 59.538 60.000 16.99 16.99 39.52 4.02
538 539 0.978146 CCCATCTTCTCCGACCTGGT 60.978 60.000 0.00 0.00 39.52 4.00
539 540 1.690219 CCCCATCTTCTCCGACCTGG 61.690 65.000 0.00 0.00 40.09 4.45
540 541 1.690219 CCCCCATCTTCTCCGACCTG 61.690 65.000 0.00 0.00 0.00 4.00
541 542 1.383248 CCCCCATCTTCTCCGACCT 60.383 63.158 0.00 0.00 0.00 3.85
542 543 0.981277 TTCCCCCATCTTCTCCGACC 60.981 60.000 0.00 0.00 0.00 4.79
543 544 1.132500 ATTCCCCCATCTTCTCCGAC 58.868 55.000 0.00 0.00 0.00 4.79
544 545 2.787339 TATTCCCCCATCTTCTCCGA 57.213 50.000 0.00 0.00 0.00 4.55
545 546 3.391296 TCTTTATTCCCCCATCTTCTCCG 59.609 47.826 0.00 0.00 0.00 4.63
546 547 4.660771 TCTCTTTATTCCCCCATCTTCTCC 59.339 45.833 0.00 0.00 0.00 3.71
547 548 5.368230 ACTCTCTTTATTCCCCCATCTTCTC 59.632 44.000 0.00 0.00 0.00 2.87
548 549 5.131809 CACTCTCTTTATTCCCCCATCTTCT 59.868 44.000 0.00 0.00 0.00 2.85
549 550 5.131142 TCACTCTCTTTATTCCCCCATCTTC 59.869 44.000 0.00 0.00 0.00 2.87
550 551 5.039645 TCACTCTCTTTATTCCCCCATCTT 58.960 41.667 0.00 0.00 0.00 2.40
551 552 4.635473 TCACTCTCTTTATTCCCCCATCT 58.365 43.478 0.00 0.00 0.00 2.90
552 553 4.745172 GCTCACTCTCTTTATTCCCCCATC 60.745 50.000 0.00 0.00 0.00 3.51
553 554 3.137360 GCTCACTCTCTTTATTCCCCCAT 59.863 47.826 0.00 0.00 0.00 4.00
554 555 2.505819 GCTCACTCTCTTTATTCCCCCA 59.494 50.000 0.00 0.00 0.00 4.96
555 556 2.483889 CGCTCACTCTCTTTATTCCCCC 60.484 54.545 0.00 0.00 0.00 5.40
556 557 2.168728 ACGCTCACTCTCTTTATTCCCC 59.831 50.000 0.00 0.00 0.00 4.81
557 558 3.190874 CACGCTCACTCTCTTTATTCCC 58.809 50.000 0.00 0.00 0.00 3.97
558 559 3.190874 CCACGCTCACTCTCTTTATTCC 58.809 50.000 0.00 0.00 0.00 3.01
559 560 3.190874 CCCACGCTCACTCTCTTTATTC 58.809 50.000 0.00 0.00 0.00 1.75
560 561 2.093447 CCCCACGCTCACTCTCTTTATT 60.093 50.000 0.00 0.00 0.00 1.40
561 562 1.482593 CCCCACGCTCACTCTCTTTAT 59.517 52.381 0.00 0.00 0.00 1.40
562 563 0.895530 CCCCACGCTCACTCTCTTTA 59.104 55.000 0.00 0.00 0.00 1.85
563 564 0.832135 TCCCCACGCTCACTCTCTTT 60.832 55.000 0.00 0.00 0.00 2.52
564 565 1.228894 TCCCCACGCTCACTCTCTT 60.229 57.895 0.00 0.00 0.00 2.85
565 566 1.680651 CTCCCCACGCTCACTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
566 567 2.716017 CCTCCCCACGCTCACTCTC 61.716 68.421 0.00 0.00 0.00 3.20
567 568 2.681778 CCTCCCCACGCTCACTCT 60.682 66.667 0.00 0.00 0.00 3.24
568 569 3.775654 CCCTCCCCACGCTCACTC 61.776 72.222 0.00 0.00 0.00 3.51
569 570 4.316823 TCCCTCCCCACGCTCACT 62.317 66.667 0.00 0.00 0.00 3.41
570 571 3.775654 CTCCCTCCCCACGCTCAC 61.776 72.222 0.00 0.00 0.00 3.51
571 572 3.317436 ATCTCCCTCCCCACGCTCA 62.317 63.158 0.00 0.00 0.00 4.26
572 573 2.444895 ATCTCCCTCCCCACGCTC 60.445 66.667 0.00 0.00 0.00 5.03
573 574 2.765807 CATCTCCCTCCCCACGCT 60.766 66.667 0.00 0.00 0.00 5.07
574 575 2.764128 TCATCTCCCTCCCCACGC 60.764 66.667 0.00 0.00 0.00 5.34
575 576 1.381872 ACTCATCTCCCTCCCCACG 60.382 63.158 0.00 0.00 0.00 4.94
576 577 1.341156 CCACTCATCTCCCTCCCCAC 61.341 65.000 0.00 0.00 0.00 4.61
577 578 1.003442 CCACTCATCTCCCTCCCCA 59.997 63.158 0.00 0.00 0.00 4.96
578 579 0.104725 ATCCACTCATCTCCCTCCCC 60.105 60.000 0.00 0.00 0.00 4.81
579 580 2.704190 TATCCACTCATCTCCCTCCC 57.296 55.000 0.00 0.00 0.00 4.30
580 581 2.903135 CCTTATCCACTCATCTCCCTCC 59.097 54.545 0.00 0.00 0.00 4.30
581 582 3.576550 GACCTTATCCACTCATCTCCCTC 59.423 52.174 0.00 0.00 0.00 4.30
582 583 3.582164 GACCTTATCCACTCATCTCCCT 58.418 50.000 0.00 0.00 0.00 4.20
583 584 2.297597 CGACCTTATCCACTCATCTCCC 59.702 54.545 0.00 0.00 0.00 4.30
584 585 2.288518 GCGACCTTATCCACTCATCTCC 60.289 54.545 0.00 0.00 0.00 3.71
585 586 2.605823 CGCGACCTTATCCACTCATCTC 60.606 54.545 0.00 0.00 0.00 2.75
586 587 1.338337 CGCGACCTTATCCACTCATCT 59.662 52.381 0.00 0.00 0.00 2.90
587 588 1.067212 ACGCGACCTTATCCACTCATC 59.933 52.381 15.93 0.00 0.00 2.92
588 589 1.112113 ACGCGACCTTATCCACTCAT 58.888 50.000 15.93 0.00 0.00 2.90
589 590 0.892755 AACGCGACCTTATCCACTCA 59.107 50.000 15.93 0.00 0.00 3.41
590 591 1.557651 GAACGCGACCTTATCCACTC 58.442 55.000 15.93 0.00 0.00 3.51
591 592 0.179145 CGAACGCGACCTTATCCACT 60.179 55.000 15.93 0.00 40.82 4.00
592 593 1.143969 CCGAACGCGACCTTATCCAC 61.144 60.000 15.93 0.00 40.82 4.02
593 594 1.140161 CCGAACGCGACCTTATCCA 59.860 57.895 15.93 0.00 40.82 3.41
594 595 1.590792 CCCGAACGCGACCTTATCC 60.591 63.158 15.93 0.00 40.82 2.59
595 596 2.235699 GCCCGAACGCGACCTTATC 61.236 63.158 15.93 0.00 40.82 1.75
596 597 2.202837 GCCCGAACGCGACCTTAT 60.203 61.111 15.93 0.00 40.82 1.73
597 598 4.440127 GGCCCGAACGCGACCTTA 62.440 66.667 15.93 0.00 40.82 2.69
604 605 4.404654 CTTGCTTGGCCCGAACGC 62.405 66.667 0.00 0.00 0.00 4.84
605 606 2.070654 AAACTTGCTTGGCCCGAACG 62.071 55.000 0.00 0.00 0.00 3.95
606 607 0.104120 AAAACTTGCTTGGCCCGAAC 59.896 50.000 0.00 0.00 0.00 3.95
607 608 0.387565 GAAAACTTGCTTGGCCCGAA 59.612 50.000 0.00 0.00 0.00 4.30
608 609 0.753479 TGAAAACTTGCTTGGCCCGA 60.753 50.000 0.00 0.00 0.00 5.14
609 610 0.318955 CTGAAAACTTGCTTGGCCCG 60.319 55.000 0.00 0.00 0.00 6.13
610 611 0.601046 GCTGAAAACTTGCTTGGCCC 60.601 55.000 0.00 0.00 0.00 5.80
611 612 0.940991 CGCTGAAAACTTGCTTGGCC 60.941 55.000 0.00 0.00 0.00 5.36
612 613 0.030638 TCGCTGAAAACTTGCTTGGC 59.969 50.000 0.00 0.00 0.00 4.52
613 614 2.119457 GTTCGCTGAAAACTTGCTTGG 58.881 47.619 0.00 0.00 0.00 3.61
614 615 1.775208 CGTTCGCTGAAAACTTGCTTG 59.225 47.619 0.00 0.00 0.00 4.01
615 616 1.668751 TCGTTCGCTGAAAACTTGCTT 59.331 42.857 0.00 0.00 0.00 3.91
616 617 1.261619 CTCGTTCGCTGAAAACTTGCT 59.738 47.619 0.00 0.00 0.00 3.91
617 618 1.003866 ACTCGTTCGCTGAAAACTTGC 60.004 47.619 0.00 0.00 0.00 4.01
618 619 3.001330 AGAACTCGTTCGCTGAAAACTTG 59.999 43.478 4.32 0.00 43.97 3.16
619 620 3.195661 AGAACTCGTTCGCTGAAAACTT 58.804 40.909 4.32 0.00 43.97 2.66
620 621 2.795470 GAGAACTCGTTCGCTGAAAACT 59.205 45.455 6.33 0.00 43.97 2.66
621 622 2.538449 TGAGAACTCGTTCGCTGAAAAC 59.462 45.455 13.28 0.00 43.97 2.43
622 623 2.538449 GTGAGAACTCGTTCGCTGAAAA 59.462 45.455 13.28 0.00 43.97 2.29
623 624 2.124903 GTGAGAACTCGTTCGCTGAAA 58.875 47.619 13.28 0.00 43.97 2.69
624 625 1.337071 AGTGAGAACTCGTTCGCTGAA 59.663 47.619 13.28 0.00 43.97 3.02
625 626 0.952280 AGTGAGAACTCGTTCGCTGA 59.048 50.000 13.28 0.00 43.97 4.26
626 627 1.056103 CAGTGAGAACTCGTTCGCTG 58.944 55.000 13.28 13.25 43.97 5.18
627 628 0.664767 GCAGTGAGAACTCGTTCGCT 60.665 55.000 13.28 6.84 43.97 4.93
628 629 0.664767 AGCAGTGAGAACTCGTTCGC 60.665 55.000 6.59 6.59 43.97 4.70
629 630 1.056103 CAGCAGTGAGAACTCGTTCG 58.944 55.000 0.00 0.00 43.97 3.95
630 631 2.055100 GTCAGCAGTGAGAACTCGTTC 58.945 52.381 0.00 1.62 39.78 3.95
631 632 1.600663 CGTCAGCAGTGAGAACTCGTT 60.601 52.381 0.00 0.00 31.53 3.85
632 633 0.039978 CGTCAGCAGTGAGAACTCGT 60.040 55.000 0.00 0.00 31.53 4.18
633 634 0.039978 ACGTCAGCAGTGAGAACTCG 60.040 55.000 0.00 0.00 31.53 4.18
634 635 1.269309 ACACGTCAGCAGTGAGAACTC 60.269 52.381 3.20 0.00 41.83 3.01
635 636 0.747255 ACACGTCAGCAGTGAGAACT 59.253 50.000 3.20 0.00 41.83 3.01
636 637 1.132588 GACACGTCAGCAGTGAGAAC 58.867 55.000 3.20 0.00 41.83 3.01
637 638 1.001268 GAGACACGTCAGCAGTGAGAA 60.001 52.381 3.20 0.00 41.83 2.87
638 639 0.593618 GAGACACGTCAGCAGTGAGA 59.406 55.000 3.20 0.00 41.83 3.27
639 640 0.595588 AGAGACACGTCAGCAGTGAG 59.404 55.000 3.20 0.00 41.83 3.51
640 641 0.312102 CAGAGACACGTCAGCAGTGA 59.688 55.000 3.20 0.00 41.83 3.41
641 642 1.280886 GCAGAGACACGTCAGCAGTG 61.281 60.000 0.00 0.00 44.57 3.66
642 643 1.006805 GCAGAGACACGTCAGCAGT 60.007 57.895 0.00 0.00 0.00 4.40
643 644 1.735920 GGCAGAGACACGTCAGCAG 60.736 63.158 0.00 0.00 0.00 4.24
644 645 2.026945 TTGGCAGAGACACGTCAGCA 62.027 55.000 0.00 0.00 0.00 4.41
645 646 1.287730 CTTGGCAGAGACACGTCAGC 61.288 60.000 0.00 0.83 0.00 4.26
646 647 0.032678 ACTTGGCAGAGACACGTCAG 59.967 55.000 0.00 0.00 0.00 3.51
647 648 0.249447 CACTTGGCAGAGACACGTCA 60.249 55.000 0.00 0.00 0.00 4.35
648 649 1.560860 GCACTTGGCAGAGACACGTC 61.561 60.000 0.00 0.00 43.97 4.34
649 650 1.595382 GCACTTGGCAGAGACACGT 60.595 57.895 4.13 0.00 43.97 4.49
650 651 3.248029 GCACTTGGCAGAGACACG 58.752 61.111 4.13 0.00 43.97 4.49
659 660 2.076863 ACAGATCGTAAAGCACTTGGC 58.923 47.619 0.00 0.00 45.30 4.52
660 661 2.159653 GCACAGATCGTAAAGCACTTGG 60.160 50.000 0.00 0.00 0.00 3.61
661 662 2.480037 TGCACAGATCGTAAAGCACTTG 59.520 45.455 0.00 0.00 0.00 3.16
662 663 2.766313 TGCACAGATCGTAAAGCACTT 58.234 42.857 0.00 0.00 0.00 3.16
663 664 2.455674 TGCACAGATCGTAAAGCACT 57.544 45.000 0.00 0.00 0.00 4.40
664 665 3.747099 ATTGCACAGATCGTAAAGCAC 57.253 42.857 0.00 0.00 0.00 4.40
665 666 5.871465 TTAATTGCACAGATCGTAAAGCA 57.129 34.783 0.00 0.00 0.00 3.91
666 667 5.909610 GGATTAATTGCACAGATCGTAAAGC 59.090 40.000 0.00 0.00 0.00 3.51
667 668 6.019075 TCGGATTAATTGCACAGATCGTAAAG 60.019 38.462 0.00 0.00 0.00 1.85
668 669 5.813157 TCGGATTAATTGCACAGATCGTAAA 59.187 36.000 0.00 0.00 0.00 2.01
669 670 5.353111 TCGGATTAATTGCACAGATCGTAA 58.647 37.500 0.00 0.00 0.00 3.18
670 671 4.939271 TCGGATTAATTGCACAGATCGTA 58.061 39.130 0.00 0.00 0.00 3.43
671 672 3.792401 TCGGATTAATTGCACAGATCGT 58.208 40.909 0.00 0.00 0.00 3.73
672 673 4.319046 CCTTCGGATTAATTGCACAGATCG 60.319 45.833 0.00 0.00 0.00 3.69
673 674 4.555511 GCCTTCGGATTAATTGCACAGATC 60.556 45.833 0.00 0.00 0.00 2.75
674 675 3.316308 GCCTTCGGATTAATTGCACAGAT 59.684 43.478 0.00 0.00 0.00 2.90
675 676 2.682856 GCCTTCGGATTAATTGCACAGA 59.317 45.455 0.00 0.00 0.00 3.41
676 677 2.423185 TGCCTTCGGATTAATTGCACAG 59.577 45.455 0.00 0.00 0.00 3.66
677 678 2.423185 CTGCCTTCGGATTAATTGCACA 59.577 45.455 0.00 0.00 0.00 4.57
678 679 2.223572 CCTGCCTTCGGATTAATTGCAC 60.224 50.000 0.00 0.00 0.00 4.57
679 680 2.023673 CCTGCCTTCGGATTAATTGCA 58.976 47.619 0.00 0.00 0.00 4.08
680 681 1.269257 GCCTGCCTTCGGATTAATTGC 60.269 52.381 0.00 0.00 0.00 3.56
681 682 2.023673 TGCCTGCCTTCGGATTAATTG 58.976 47.619 0.00 0.00 0.00 2.32
682 683 2.427095 GTTGCCTGCCTTCGGATTAATT 59.573 45.455 0.00 0.00 0.00 1.40
683 684 2.024414 GTTGCCTGCCTTCGGATTAAT 58.976 47.619 0.00 0.00 0.00 1.40
684 685 1.271652 TGTTGCCTGCCTTCGGATTAA 60.272 47.619 0.00 0.00 0.00 1.40
685 686 0.326595 TGTTGCCTGCCTTCGGATTA 59.673 50.000 0.00 0.00 0.00 1.75
686 687 1.074775 TGTTGCCTGCCTTCGGATT 59.925 52.632 0.00 0.00 0.00 3.01
687 688 1.675641 GTGTTGCCTGCCTTCGGAT 60.676 57.895 0.00 0.00 0.00 4.18
688 689 2.281484 GTGTTGCCTGCCTTCGGA 60.281 61.111 0.00 0.00 0.00 4.55
689 690 1.526575 AATGTGTTGCCTGCCTTCGG 61.527 55.000 0.00 0.00 0.00 4.30
690 691 0.109597 GAATGTGTTGCCTGCCTTCG 60.110 55.000 0.00 0.00 0.00 3.79
691 692 0.244721 GGAATGTGTTGCCTGCCTTC 59.755 55.000 0.00 0.00 0.00 3.46
692 693 1.526575 CGGAATGTGTTGCCTGCCTT 61.527 55.000 0.00 0.00 0.00 4.35
693 694 1.973281 CGGAATGTGTTGCCTGCCT 60.973 57.895 0.00 0.00 0.00 4.75
694 695 2.568090 CGGAATGTGTTGCCTGCC 59.432 61.111 0.00 0.00 0.00 4.85
695 696 1.971167 TCCGGAATGTGTTGCCTGC 60.971 57.895 0.00 0.00 0.00 4.85
696 697 1.875963 GTCCGGAATGTGTTGCCTG 59.124 57.895 5.23 0.00 0.00 4.85
697 698 1.671054 CGTCCGGAATGTGTTGCCT 60.671 57.895 5.23 0.00 0.00 4.75
698 699 1.512156 AACGTCCGGAATGTGTTGCC 61.512 55.000 5.23 0.00 0.00 4.52
699 700 0.110373 GAACGTCCGGAATGTGTTGC 60.110 55.000 5.23 0.53 0.00 4.17
700 701 0.162933 CGAACGTCCGGAATGTGTTG 59.837 55.000 5.23 0.00 0.00 3.33
701 702 0.032403 TCGAACGTCCGGAATGTGTT 59.968 50.000 5.23 9.16 0.00 3.32
702 703 0.388134 CTCGAACGTCCGGAATGTGT 60.388 55.000 5.23 0.00 0.00 3.72
703 704 1.683790 GCTCGAACGTCCGGAATGTG 61.684 60.000 5.23 0.00 0.00 3.21
704 705 1.445582 GCTCGAACGTCCGGAATGT 60.446 57.895 5.23 4.97 0.00 2.71
705 706 0.806102 ATGCTCGAACGTCCGGAATG 60.806 55.000 5.23 4.16 0.00 2.67
706 707 0.108329 AATGCTCGAACGTCCGGAAT 60.108 50.000 5.23 0.00 0.00 3.01
707 708 0.527113 TAATGCTCGAACGTCCGGAA 59.473 50.000 5.23 0.00 0.00 4.30
708 709 0.742505 ATAATGCTCGAACGTCCGGA 59.257 50.000 0.00 0.00 0.00 5.14
709 710 1.129326 GATAATGCTCGAACGTCCGG 58.871 55.000 0.00 0.00 0.00 5.14
710 711 0.770590 CGATAATGCTCGAACGTCCG 59.229 55.000 0.00 0.00 41.12 4.79
711 712 1.836383 ACGATAATGCTCGAACGTCC 58.164 50.000 0.00 0.00 41.12 4.79
712 713 3.301643 GGAAACGATAATGCTCGAACGTC 60.302 47.826 0.00 0.00 41.12 4.34
713 714 2.601763 GGAAACGATAATGCTCGAACGT 59.398 45.455 0.00 0.00 41.12 3.99
714 715 2.034001 GGGAAACGATAATGCTCGAACG 60.034 50.000 0.00 0.00 41.12 3.95
715 716 3.195661 AGGGAAACGATAATGCTCGAAC 58.804 45.455 0.00 0.00 41.12 3.95
716 717 3.536956 AGGGAAACGATAATGCTCGAA 57.463 42.857 0.00 0.00 41.12 3.71
717 718 4.866508 ATAGGGAAACGATAATGCTCGA 57.133 40.909 0.00 0.00 41.12 4.04
718 719 5.465390 TCAAATAGGGAAACGATAATGCTCG 59.535 40.000 0.00 0.00 44.14 5.03
719 720 6.861065 TCAAATAGGGAAACGATAATGCTC 57.139 37.500 0.00 0.00 0.00 4.26
720 721 7.201821 CCTTTCAAATAGGGAAACGATAATGCT 60.202 37.037 0.00 0.00 31.44 3.79
721 722 6.918022 CCTTTCAAATAGGGAAACGATAATGC 59.082 38.462 0.00 0.00 31.44 3.56
722 723 8.220755 TCCTTTCAAATAGGGAAACGATAATG 57.779 34.615 0.00 0.00 33.41 1.90
723 724 8.817092 TTCCTTTCAAATAGGGAAACGATAAT 57.183 30.769 0.00 0.00 35.27 1.28
724 725 8.638629 TTTCCTTTCAAATAGGGAAACGATAA 57.361 30.769 0.00 0.00 41.21 1.75
725 726 8.817092 ATTTCCTTTCAAATAGGGAAACGATA 57.183 30.769 4.60 0.00 46.27 2.92
726 727 7.718334 ATTTCCTTTCAAATAGGGAAACGAT 57.282 32.000 4.60 0.00 46.27 3.73
727 728 7.886446 ACTATTTCCTTTCAAATAGGGAAACGA 59.114 33.333 14.46 0.00 46.27 3.85
728 729 8.051901 ACTATTTCCTTTCAAATAGGGAAACG 57.948 34.615 14.46 2.99 46.27 3.60
732 733 8.736244 CGAAAACTATTTCCTTTCAAATAGGGA 58.264 33.333 14.46 0.00 45.19 4.20
733 734 8.520351 ACGAAAACTATTTCCTTTCAAATAGGG 58.480 33.333 14.46 4.48 45.19 3.53
734 735 9.341899 CACGAAAACTATTTCCTTTCAAATAGG 57.658 33.333 14.46 0.00 45.19 2.57
735 736 8.850452 GCACGAAAACTATTTCCTTTCAAATAG 58.150 33.333 10.18 10.18 45.88 1.73
1014 1025 3.880490 GAGAAAGAGGAGCTGATAGACGA 59.120 47.826 0.00 0.00 0.00 4.20
1021 1032 1.608717 GCGGGAGAAAGAGGAGCTGA 61.609 60.000 0.00 0.00 0.00 4.26
1059 1071 1.328439 GAGCGATAATACGTGCGAGG 58.672 55.000 0.00 0.00 35.59 4.63
1077 1089 1.640428 GAATCCATCACAACGAGCGA 58.360 50.000 0.00 0.00 0.00 4.93
1354 1565 6.128553 CGTAAGACAGCAATCACAAACATAGT 60.129 38.462 0.00 0.00 43.02 2.12
1436 1653 3.057174 ACCTAGCTTCAACGAGACAGAAG 60.057 47.826 0.00 0.00 41.20 2.85
1468 1685 7.350744 AGAATGGCATATAACTTGCATCAAA 57.649 32.000 0.00 0.00 41.95 2.69
1597 2012 6.262273 GGTCCAAATTACTTCTCAGAAACACA 59.738 38.462 0.00 0.00 0.00 3.72
1664 2083 9.669353 CATCTAAATGATTACAGTAAACCATGC 57.331 33.333 10.58 0.00 34.61 4.06
1702 2150 6.631016 ACATACTTGAGTGTGTACGAATCAT 58.369 36.000 11.18 0.00 46.24 2.45
1739 2193 2.494870 AGTATAAACCCGAGCGACTTGT 59.505 45.455 0.00 0.00 0.00 3.16
1740 2194 3.160777 AGTATAAACCCGAGCGACTTG 57.839 47.619 0.00 0.00 0.00 3.16
1745 2199 3.242870 ACGAGTTAGTATAAACCCGAGCG 60.243 47.826 0.00 0.00 34.61 5.03
1749 2203 5.039333 CCTTCACGAGTTAGTATAAACCCG 58.961 45.833 0.00 0.00 36.74 5.28
1931 2446 1.687563 ACCCCTGGAAACAAGAAACG 58.312 50.000 0.00 0.00 42.06 3.60
2278 2803 3.287121 GACAGCGCTGTGAGCAACG 62.287 63.158 45.07 16.08 45.05 4.10
2517 3042 7.179338 ACAGATACTATCAAGGTAAGCATAGGG 59.821 40.741 0.00 0.00 0.00 3.53
2531 3056 4.081917 TGACGGTGCAAACAGATACTATCA 60.082 41.667 0.00 0.00 0.00 2.15
2534 3059 3.945981 TGACGGTGCAAACAGATACTA 57.054 42.857 0.00 0.00 0.00 1.82
2585 3117 1.808945 GTTCAACAGACATGCCTGGAG 59.191 52.381 13.95 5.40 38.44 3.86
2632 3164 7.306283 CGAGGACTACTTCAATCATTCGAATTC 60.306 40.741 8.21 0.00 0.00 2.17
2646 3178 2.164624 AGCACACATCGAGGACTACTTC 59.835 50.000 3.06 0.00 0.00 3.01
2657 3189 8.525876 CATTAAAACAATAATCAGCACACATCG 58.474 33.333 0.00 0.00 0.00 3.84
2698 3231 9.151471 CGATAACTGAAGAAAGAAAAGGACATA 57.849 33.333 0.00 0.00 0.00 2.29
2712 3245 3.610040 ATGCACACCGATAACTGAAGA 57.390 42.857 0.00 0.00 0.00 2.87
2713 3246 7.658179 AATATATGCACACCGATAACTGAAG 57.342 36.000 0.00 0.00 0.00 3.02
2714 3247 9.719355 ATAAATATATGCACACCGATAACTGAA 57.281 29.630 0.00 0.00 0.00 3.02
2715 3248 9.150348 CATAAATATATGCACACCGATAACTGA 57.850 33.333 0.00 0.00 33.01 3.41
2716 3249 8.390354 CCATAAATATATGCACACCGATAACTG 58.610 37.037 0.00 0.00 38.06 3.16
2773 3306 7.817418 AACCAAATAGTGCAGAACTTAGAAA 57.183 32.000 0.00 0.00 40.56 2.52
2776 3309 7.595130 GGAAAAACCAAATAGTGCAGAACTTAG 59.405 37.037 0.00 0.00 38.27 2.18
2778 3311 6.127196 TGGAAAAACCAAATAGTGCAGAACTT 60.127 34.615 0.00 0.00 46.75 2.66
2779 3312 5.362430 TGGAAAAACCAAATAGTGCAGAACT 59.638 36.000 0.00 0.00 46.75 3.01
2780 3313 5.596845 TGGAAAAACCAAATAGTGCAGAAC 58.403 37.500 0.00 0.00 46.75 3.01
2801 3334 0.541863 AGGGTACGAAAGGCTCATGG 59.458 55.000 0.00 0.00 0.00 3.66
2820 3354 6.825944 TGTCATGACAATTCCCGATTTTAA 57.174 33.333 26.02 0.00 38.56 1.52
2822 3356 5.720371 TTGTCATGACAATTCCCGATTTT 57.280 34.783 32.36 0.00 45.42 1.82
2835 3369 4.634443 ACCGCTAATTTAGGTTGTCATGAC 59.366 41.667 19.27 19.27 33.96 3.06
2836 3370 4.839121 ACCGCTAATTTAGGTTGTCATGA 58.161 39.130 5.61 0.00 33.96 3.07
2837 3371 5.276678 CGTACCGCTAATTTAGGTTGTCATG 60.277 44.000 5.61 0.00 39.31 3.07
2838 3372 4.807304 CGTACCGCTAATTTAGGTTGTCAT 59.193 41.667 5.61 0.00 39.31 3.06
2839 3373 4.082300 TCGTACCGCTAATTTAGGTTGTCA 60.082 41.667 5.61 0.00 39.31 3.58
2840 3374 4.423732 TCGTACCGCTAATTTAGGTTGTC 58.576 43.478 5.61 0.00 39.31 3.18
2841 3375 4.454728 TCGTACCGCTAATTTAGGTTGT 57.545 40.909 5.61 0.00 39.31 3.32
2842 3376 5.725864 GCTTTCGTACCGCTAATTTAGGTTG 60.726 44.000 5.61 0.49 39.31 3.77
2843 3377 4.330894 GCTTTCGTACCGCTAATTTAGGTT 59.669 41.667 5.61 0.00 39.31 3.50
2844 3378 3.867493 GCTTTCGTACCGCTAATTTAGGT 59.133 43.478 5.61 4.88 41.73 3.08
2845 3379 3.866910 TGCTTTCGTACCGCTAATTTAGG 59.133 43.478 5.61 0.00 0.00 2.69
2847 3381 3.866910 CCTGCTTTCGTACCGCTAATTTA 59.133 43.478 0.00 0.00 0.00 1.40
2848 3382 2.676342 CCTGCTTTCGTACCGCTAATTT 59.324 45.455 0.00 0.00 0.00 1.82
2849 3383 2.093869 TCCTGCTTTCGTACCGCTAATT 60.094 45.455 0.00 0.00 0.00 1.40
2850 3384 1.479323 TCCTGCTTTCGTACCGCTAAT 59.521 47.619 0.00 0.00 0.00 1.73
2851 3385 0.889994 TCCTGCTTTCGTACCGCTAA 59.110 50.000 0.00 0.00 0.00 3.09
2852 3386 0.454600 CTCCTGCTTTCGTACCGCTA 59.545 55.000 0.00 0.00 0.00 4.26
2855 3389 1.153628 CCCTCCTGCTTTCGTACCG 60.154 63.158 0.00 0.00 0.00 4.02
2857 3391 0.611714 TTCCCCTCCTGCTTTCGTAC 59.388 55.000 0.00 0.00 0.00 3.67
2858 3392 1.580059 ATTCCCCTCCTGCTTTCGTA 58.420 50.000 0.00 0.00 0.00 3.43
2859 3393 1.486726 CTATTCCCCTCCTGCTTTCGT 59.513 52.381 0.00 0.00 0.00 3.85
2860 3394 1.811941 GCTATTCCCCTCCTGCTTTCG 60.812 57.143 0.00 0.00 0.00 3.46
2861 3395 1.477740 GGCTATTCCCCTCCTGCTTTC 60.478 57.143 0.00 0.00 0.00 2.62
2862 3396 0.553333 GGCTATTCCCCTCCTGCTTT 59.447 55.000 0.00 0.00 0.00 3.51
2863 3397 0.624500 TGGCTATTCCCCTCCTGCTT 60.625 55.000 0.00 0.00 0.00 3.91
2864 3398 0.402566 ATGGCTATTCCCCTCCTGCT 60.403 55.000 0.00 0.00 0.00 4.24
2865 3399 0.480252 AATGGCTATTCCCCTCCTGC 59.520 55.000 0.00 0.00 0.00 4.85
2866 3400 1.202976 CCAATGGCTATTCCCCTCCTG 60.203 57.143 0.00 0.00 0.00 3.86
2868 3402 0.540597 GCCAATGGCTATTCCCCTCC 60.541 60.000 18.47 0.00 46.69 4.30
2869 3403 3.042481 GCCAATGGCTATTCCCCTC 57.958 57.895 18.47 0.00 46.69 4.30
2897 3738 2.850439 CACCTCGTCTCGGTGTCTA 58.150 57.895 1.16 0.00 45.36 2.59
2903 3744 3.827898 GCCTCCACCTCGTCTCGG 61.828 72.222 0.00 0.00 0.00 4.63
2904 3745 4.180946 CGCCTCCACCTCGTCTCG 62.181 72.222 0.00 0.00 0.00 4.04
2909 3750 3.592814 TATCGCGCCTCCACCTCG 61.593 66.667 0.00 0.00 0.00 4.63
2910 3751 2.027751 GTATCGCGCCTCCACCTC 59.972 66.667 0.00 0.00 0.00 3.85
2922 3771 7.850982 CGAAAAGAATTTAACCCATCAGTATCG 59.149 37.037 0.00 0.00 37.28 2.92
2929 3778 6.262193 TCACCGAAAAGAATTTAACCCATC 57.738 37.500 0.00 0.00 37.28 3.51
2930 3779 5.336451 GCTCACCGAAAAGAATTTAACCCAT 60.336 40.000 0.00 0.00 37.28 4.00
2935 3784 4.612712 CGCTGCTCACCGAAAAGAATTTAA 60.613 41.667 0.00 0.00 37.28 1.52
2937 3786 2.350772 CGCTGCTCACCGAAAAGAATTT 60.351 45.455 0.00 0.00 42.41 1.82
2987 4231 1.810532 GTCGTCCTCAGGGCAGTAG 59.189 63.158 0.00 0.00 0.00 2.57
2989 4233 3.374402 CGTCGTCCTCAGGGCAGT 61.374 66.667 0.00 0.00 0.00 4.40
2995 4239 2.502080 GTCGTGCGTCGTCCTCAG 60.502 66.667 0.00 0.00 40.80 3.35
3000 4244 1.678360 TTTTAGAGTCGTGCGTCGTC 58.322 50.000 0.00 0.00 40.80 4.20
3006 4251 3.426292 GGGCTTTGATTTTAGAGTCGTGC 60.426 47.826 0.00 0.00 0.00 5.34
3009 4254 3.623510 GGAGGGCTTTGATTTTAGAGTCG 59.376 47.826 0.00 0.00 0.00 4.18
3010 4255 4.849518 AGGAGGGCTTTGATTTTAGAGTC 58.150 43.478 0.00 0.00 0.00 3.36
3084 4329 4.022329 CGCCCACTTTAAACAAAGGAGAAT 60.022 41.667 2.51 0.00 34.18 2.40
3092 4337 1.677052 GGTGACGCCCACTTTAAACAA 59.323 47.619 8.20 0.00 45.03 2.83
3124 4369 0.456221 ACATACCGTCCTCTCAAGCG 59.544 55.000 0.00 0.00 0.00 4.68
3179 4424 6.816640 TGAAGGTGAGGATATTTTTAGACACG 59.183 38.462 0.00 0.00 0.00 4.49
3181 4426 7.685481 TGTGAAGGTGAGGATATTTTTAGACA 58.315 34.615 0.00 0.00 0.00 3.41
3182 4427 8.561738 TTGTGAAGGTGAGGATATTTTTAGAC 57.438 34.615 0.00 0.00 0.00 2.59
3191 4436 7.741785 TCTTTTACTTTGTGAAGGTGAGGATA 58.258 34.615 0.00 0.00 37.19 2.59
3224 4484 4.904251 AGGGTTGATAGACTGCAGTGATAT 59.096 41.667 27.27 21.04 0.00 1.63
3227 4487 2.540383 AGGGTTGATAGACTGCAGTGA 58.460 47.619 27.27 12.67 0.00 3.41
3239 4499 8.893563 TGGTATTTTCTAAATGAAGGGTTGAT 57.106 30.769 0.00 0.00 35.89 2.57
3293 4553 9.382275 GAAGGCATGGATTATTTTTGTAAATGT 57.618 29.630 0.00 0.00 35.61 2.71
3294 4554 9.381033 TGAAGGCATGGATTATTTTTGTAAATG 57.619 29.630 0.00 0.00 35.61 2.32
3299 4559 7.427989 AGATGAAGGCATGGATTATTTTTGT 57.572 32.000 0.00 0.00 34.11 2.83
3300 4560 9.820725 TTTAGATGAAGGCATGGATTATTTTTG 57.179 29.630 0.00 0.00 34.11 2.44
3328 4588 4.987912 CACGGCATGTAAACTTTTGGAATT 59.012 37.500 0.00 0.00 0.00 2.17
3329 4589 4.279671 TCACGGCATGTAAACTTTTGGAAT 59.720 37.500 0.00 0.00 0.00 3.01
3332 4593 3.305110 GTCACGGCATGTAAACTTTTGG 58.695 45.455 0.00 0.00 0.00 3.28
3339 4600 1.231221 GTGTGGTCACGGCATGTAAA 58.769 50.000 0.00 0.00 34.79 2.01
3350 4611 1.155889 CATTAAGCTGCGTGTGGTCA 58.844 50.000 0.00 0.00 0.00 4.02
3352 4613 0.960364 CCCATTAAGCTGCGTGTGGT 60.960 55.000 16.11 0.00 0.00 4.16
3376 4678 1.978542 CTCAGCATTTTCACAGCAGC 58.021 50.000 0.00 0.00 0.00 5.25
3392 4694 2.009681 TGGTAACAGACTCCAGCTCA 57.990 50.000 0.00 0.00 46.17 4.26
3438 4760 0.038744 ATTCACTCAAGTGCCAGGGG 59.961 55.000 5.25 0.00 45.25 4.79
3439 4761 2.787473 TATTCACTCAAGTGCCAGGG 57.213 50.000 5.25 0.00 45.25 4.45
3441 4763 5.633830 AAACATATTCACTCAAGTGCCAG 57.366 39.130 5.25 0.00 45.25 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.