Multiple sequence alignment - TraesCS2D01G228700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G228700 chr2D 100.000 3150 0 0 1 3150 197876349 197873200 0.000000e+00 5818.0
1 TraesCS2D01G228700 chr2D 89.305 187 14 5 2570 2752 423348523 423348339 2.440000e-56 230.0
2 TraesCS2D01G228700 chr2D 88.482 191 12 6 2570 2752 540163585 540163773 4.090000e-54 222.0
3 TraesCS2D01G228700 chr2A 92.634 1629 73 18 828 2454 214425353 214423770 0.000000e+00 2300.0
4 TraesCS2D01G228700 chr2B 95.068 1399 47 9 773 2165 254645625 254644243 0.000000e+00 2182.0
5 TraesCS2D01G228700 chr2B 85.714 378 36 8 2194 2564 254643861 254643495 1.770000e-102 383.0
6 TraesCS2D01G228700 chr2B 92.157 51 1 3 670 719 684988990 684989038 5.640000e-08 69.4
7 TraesCS2D01G228700 chr4B 92.687 588 42 1 2 588 211891600 211891013 0.000000e+00 846.0
8 TraesCS2D01G228700 chr6B 92.542 590 38 4 2 586 119714191 119713603 0.000000e+00 841.0
9 TraesCS2D01G228700 chr1D 92.555 591 37 5 2 585 473579575 473578985 0.000000e+00 841.0
10 TraesCS2D01G228700 chr1D 91.878 591 40 4 2 585 384104805 384104216 0.000000e+00 819.0
11 TraesCS2D01G228700 chr7A 92.217 591 39 2 2 585 211700395 211699805 0.000000e+00 830.0
12 TraesCS2D01G228700 chr5A 91.980 586 44 3 2 586 17975024 17974441 0.000000e+00 819.0
13 TraesCS2D01G228700 chr7B 91.952 584 46 1 2 585 369135411 369135993 0.000000e+00 817.0
14 TraesCS2D01G228700 chr6D 91.952 584 46 1 2 585 193782453 193783035 0.000000e+00 817.0
15 TraesCS2D01G228700 chr6D 89.730 185 11 7 2573 2750 406395565 406395382 2.440000e-56 230.0
16 TraesCS2D01G228700 chr3B 91.795 585 48 0 2 586 568717677 568717093 0.000000e+00 815.0
17 TraesCS2D01G228700 chr5D 90.608 181 11 5 2573 2748 515337653 515337474 5.250000e-58 235.0
18 TraesCS2D01G228700 chr5D 87.879 198 16 6 2569 2759 217757080 217756884 3.160000e-55 226.0
19 TraesCS2D01G228700 chr5D 89.071 183 15 4 2570 2749 447632067 447632247 4.090000e-54 222.0
20 TraesCS2D01G228700 chr3D 90.659 182 10 5 2574 2749 533955515 533955695 5.250000e-58 235.0
21 TraesCS2D01G228700 chr3D 89.130 184 12 6 2578 2755 167560927 167560746 4.090000e-54 222.0
22 TraesCS2D01G228700 chr4D 86.634 202 17 6 2564 2756 50424238 50424438 6.840000e-52 215.0
23 TraesCS2D01G228700 chr3A 84.211 76 7 4 2949 3021 673211141 673211068 5.640000e-08 69.4
24 TraesCS2D01G228700 chr3A 100.000 33 0 0 688 720 580601883 580601851 9.430000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G228700 chr2D 197873200 197876349 3149 True 5818.0 5818 100.000 1 3150 1 chr2D.!!$R1 3149
1 TraesCS2D01G228700 chr2A 214423770 214425353 1583 True 2300.0 2300 92.634 828 2454 1 chr2A.!!$R1 1626
2 TraesCS2D01G228700 chr2B 254643495 254645625 2130 True 1282.5 2182 90.391 773 2564 2 chr2B.!!$R1 1791
3 TraesCS2D01G228700 chr4B 211891013 211891600 587 True 846.0 846 92.687 2 588 1 chr4B.!!$R1 586
4 TraesCS2D01G228700 chr6B 119713603 119714191 588 True 841.0 841 92.542 2 586 1 chr6B.!!$R1 584
5 TraesCS2D01G228700 chr1D 473578985 473579575 590 True 841.0 841 92.555 2 585 1 chr1D.!!$R2 583
6 TraesCS2D01G228700 chr1D 384104216 384104805 589 True 819.0 819 91.878 2 585 1 chr1D.!!$R1 583
7 TraesCS2D01G228700 chr7A 211699805 211700395 590 True 830.0 830 92.217 2 585 1 chr7A.!!$R1 583
8 TraesCS2D01G228700 chr5A 17974441 17975024 583 True 819.0 819 91.980 2 586 1 chr5A.!!$R1 584
9 TraesCS2D01G228700 chr7B 369135411 369135993 582 False 817.0 817 91.952 2 585 1 chr7B.!!$F1 583
10 TraesCS2D01G228700 chr6D 193782453 193783035 582 False 817.0 817 91.952 2 585 1 chr6D.!!$F1 583
11 TraesCS2D01G228700 chr3B 568717093 568717677 584 True 815.0 815 91.795 2 586 1 chr3B.!!$R1 584

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
747 770 0.037232 CCTCGTCTCAGTTTCACCCC 60.037 60.0 0.0 0.0 0.0 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 2558 0.384309 CCTACGCGCTTGACATCCTA 59.616 55.0 5.73 0.0 0.0 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 5.053978 AGGAAGGCATTGGGAAGTAATAG 57.946 43.478 0.00 0.00 0.00 1.73
49 50 7.931015 TTGGGAAGTAATAGGTAGATGATGT 57.069 36.000 0.00 0.00 0.00 3.06
77 78 4.689612 AGAGTGACAGAAGCTTAAACCA 57.310 40.909 0.00 0.00 0.00 3.67
102 103 4.392138 AGTTTATGAGTTGCTTCGTAAGGC 59.608 41.667 0.00 0.00 31.99 4.35
176 177 5.784578 TCTCTTATAGTTGCGGATGCTTA 57.215 39.130 0.00 0.00 43.34 3.09
188 189 2.878406 CGGATGCTTACAATAGGGGTTG 59.122 50.000 0.00 0.00 35.25 3.77
203 204 4.577096 AGGGGTTGATCATAAGTGGGATA 58.423 43.478 0.00 0.00 0.00 2.59
224 225 1.882623 CTTGTCCAAGAAAGGGCAGTC 59.117 52.381 0.61 0.00 45.41 3.51
262 263 7.920682 GTCCACCCACATATCAAATTATCAAAC 59.079 37.037 0.00 0.00 0.00 2.93
378 401 7.957002 TGTTATTTGCTACAAAAAGGATTGGA 58.043 30.769 0.00 0.00 34.56 3.53
401 424 1.904287 TCTTGCCGCACCTTGTTTAT 58.096 45.000 0.00 0.00 0.00 1.40
477 500 4.142622 CCGATAATTTCAGTGCTTGCAGAA 60.143 41.667 0.00 0.00 0.00 3.02
497 520 6.293790 GCAGAAAATACCTTACTGAAAACCGT 60.294 38.462 0.00 0.00 0.00 4.83
550 573 7.597743 GGTTCGACACTCTTACTTATCAAAAGA 59.402 37.037 0.00 0.00 0.00 2.52
588 611 1.072331 ACACTTGTGGGTCATCAGTCC 59.928 52.381 5.72 0.00 0.00 3.85
589 612 0.321671 ACTTGTGGGTCATCAGTCCG 59.678 55.000 0.00 0.00 0.00 4.79
590 613 0.321671 CTTGTGGGTCATCAGTCCGT 59.678 55.000 0.00 0.00 0.00 4.69
591 614 0.320374 TTGTGGGTCATCAGTCCGTC 59.680 55.000 0.00 0.00 0.00 4.79
592 615 1.153823 GTGGGTCATCAGTCCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
593 616 2.348104 TGGGTCATCAGTCCGTCGG 61.348 63.158 4.39 4.39 0.00 4.79
594 617 2.202756 GGTCATCAGTCCGTCGGC 60.203 66.667 6.34 1.61 0.00 5.54
595 618 2.579787 GTCATCAGTCCGTCGGCG 60.580 66.667 6.34 0.29 37.95 6.46
596 619 3.060000 TCATCAGTCCGTCGGCGT 61.060 61.111 9.28 0.00 36.15 5.68
597 620 2.579787 CATCAGTCCGTCGGCGTC 60.580 66.667 9.28 0.00 36.15 5.19
598 621 3.060000 ATCAGTCCGTCGGCGTCA 61.060 61.111 9.28 0.00 36.15 4.35
599 622 2.632544 ATCAGTCCGTCGGCGTCAA 61.633 57.895 9.28 0.00 36.15 3.18
600 623 1.945354 ATCAGTCCGTCGGCGTCAAT 61.945 55.000 9.28 0.00 36.15 2.57
601 624 1.736645 CAGTCCGTCGGCGTCAATT 60.737 57.895 9.28 0.00 36.15 2.32
602 625 1.005394 AGTCCGTCGGCGTCAATTT 60.005 52.632 9.28 0.00 36.15 1.82
603 626 0.601841 AGTCCGTCGGCGTCAATTTT 60.602 50.000 9.28 0.00 36.15 1.82
604 627 0.452122 GTCCGTCGGCGTCAATTTTG 60.452 55.000 9.28 0.00 36.15 2.44
605 628 1.154301 CCGTCGGCGTCAATTTTGG 60.154 57.895 9.28 0.00 36.15 3.28
606 629 1.795962 CGTCGGCGTCAATTTTGGC 60.796 57.895 6.85 0.00 0.00 4.52
607 630 1.443702 GTCGGCGTCAATTTTGGCC 60.444 57.895 6.85 0.00 42.14 5.36
608 631 1.602323 TCGGCGTCAATTTTGGCCT 60.602 52.632 6.85 0.00 43.38 5.19
609 632 0.321741 TCGGCGTCAATTTTGGCCTA 60.322 50.000 6.85 0.00 43.38 3.93
610 633 0.523966 CGGCGTCAATTTTGGCCTAA 59.476 50.000 3.32 0.00 43.38 2.69
611 634 1.068194 CGGCGTCAATTTTGGCCTAAA 60.068 47.619 14.79 14.79 43.38 1.85
612 635 2.333926 GGCGTCAATTTTGGCCTAAAC 58.666 47.619 14.74 2.07 42.29 2.01
613 636 2.333926 GCGTCAATTTTGGCCTAAACC 58.666 47.619 14.74 3.01 0.00 3.27
614 637 2.591133 CGTCAATTTTGGCCTAAACCG 58.409 47.619 14.74 10.61 0.00 4.44
615 638 2.669950 CGTCAATTTTGGCCTAAACCGG 60.670 50.000 14.74 0.00 0.00 5.28
622 645 3.658048 GCCTAAACCGGCGAAACA 58.342 55.556 9.30 0.00 40.79 2.83
623 646 1.208358 GCCTAAACCGGCGAAACAC 59.792 57.895 9.30 0.00 40.79 3.32
624 647 1.494189 CCTAAACCGGCGAAACACG 59.506 57.895 9.30 0.00 45.66 4.49
630 653 3.110178 CGGCGAAACACGGACTCC 61.110 66.667 0.00 0.00 42.83 3.85
631 654 2.342648 GGCGAAACACGGACTCCT 59.657 61.111 0.00 0.00 42.83 3.69
632 655 1.588082 GGCGAAACACGGACTCCTA 59.412 57.895 0.00 0.00 42.83 2.94
633 656 0.037975 GGCGAAACACGGACTCCTAA 60.038 55.000 0.00 0.00 42.83 2.69
634 657 1.347320 GCGAAACACGGACTCCTAAG 58.653 55.000 0.00 0.00 42.83 2.18
635 658 1.992170 CGAAACACGGACTCCTAAGG 58.008 55.000 0.00 0.00 38.46 2.69
636 659 1.542915 CGAAACACGGACTCCTAAGGA 59.457 52.381 0.00 0.00 38.46 3.36
637 660 2.670509 CGAAACACGGACTCCTAAGGAC 60.671 54.545 0.00 0.00 38.46 3.85
638 661 0.886563 AACACGGACTCCTAAGGACG 59.113 55.000 0.00 0.00 33.61 4.79
639 662 1.139095 CACGGACTCCTAAGGACGC 59.861 63.158 0.00 0.00 31.46 5.19
640 663 2.404995 ACGGACTCCTAAGGACGCG 61.405 63.158 3.53 3.53 31.46 6.01
641 664 2.110967 CGGACTCCTAAGGACGCGA 61.111 63.158 15.93 0.00 0.00 5.87
642 665 1.432657 GGACTCCTAAGGACGCGAC 59.567 63.158 15.93 6.56 0.00 5.19
643 666 1.031029 GGACTCCTAAGGACGCGACT 61.031 60.000 15.93 7.85 0.00 4.18
644 667 0.099082 GACTCCTAAGGACGCGACTG 59.901 60.000 15.93 0.62 0.00 3.51
645 668 0.322277 ACTCCTAAGGACGCGACTGA 60.322 55.000 15.93 2.31 0.00 3.41
646 669 0.809385 CTCCTAAGGACGCGACTGAA 59.191 55.000 15.93 2.01 0.00 3.02
647 670 0.524862 TCCTAAGGACGCGACTGAAC 59.475 55.000 15.93 0.00 0.00 3.18
648 671 0.458025 CCTAAGGACGCGACTGAACC 60.458 60.000 15.93 6.12 0.00 3.62
649 672 0.797249 CTAAGGACGCGACTGAACCG 60.797 60.000 15.93 0.00 0.00 4.44
650 673 1.236616 TAAGGACGCGACTGAACCGA 61.237 55.000 15.93 0.00 0.00 4.69
651 674 1.874345 AAGGACGCGACTGAACCGAT 61.874 55.000 15.93 0.00 0.00 4.18
652 675 1.445582 GGACGCGACTGAACCGATT 60.446 57.895 15.93 0.00 0.00 3.34
653 676 1.012486 GGACGCGACTGAACCGATTT 61.012 55.000 15.93 0.00 0.00 2.17
654 677 0.788391 GACGCGACTGAACCGATTTT 59.212 50.000 15.93 0.00 0.00 1.82
655 678 1.193874 GACGCGACTGAACCGATTTTT 59.806 47.619 15.93 0.00 0.00 1.94
656 679 2.406130 ACGCGACTGAACCGATTTTTA 58.594 42.857 15.93 0.00 0.00 1.52
657 680 2.801679 ACGCGACTGAACCGATTTTTAA 59.198 40.909 15.93 0.00 0.00 1.52
658 681 3.120786 ACGCGACTGAACCGATTTTTAAG 60.121 43.478 15.93 0.00 0.00 1.85
659 682 3.161306 GCGACTGAACCGATTTTTAAGC 58.839 45.455 0.00 0.00 0.00 3.09
660 683 3.404564 CGACTGAACCGATTTTTAAGCG 58.595 45.455 0.00 0.00 40.52 4.68
661 684 3.161306 GACTGAACCGATTTTTAAGCGC 58.839 45.455 0.00 0.00 39.30 5.92
662 685 2.812011 ACTGAACCGATTTTTAAGCGCT 59.188 40.909 2.64 2.64 39.30 5.92
663 686 3.163594 CTGAACCGATTTTTAAGCGCTG 58.836 45.455 12.58 0.00 39.30 5.18
664 687 2.095466 TGAACCGATTTTTAAGCGCTGG 60.095 45.455 12.58 7.79 39.30 4.85
665 688 0.170339 ACCGATTTTTAAGCGCTGGC 59.830 50.000 12.58 0.00 39.30 4.85
666 689 0.170116 CCGATTTTTAAGCGCTGGCA 59.830 50.000 12.58 0.00 43.41 4.92
667 690 1.259316 CGATTTTTAAGCGCTGGCAC 58.741 50.000 12.58 0.00 43.41 5.01
668 691 1.259316 GATTTTTAAGCGCTGGCACG 58.741 50.000 12.58 5.33 43.41 5.34
669 692 0.878416 ATTTTTAAGCGCTGGCACGA 59.122 45.000 12.58 0.00 43.41 4.35
670 693 0.663688 TTTTTAAGCGCTGGCACGAA 59.336 45.000 12.58 0.00 43.41 3.85
671 694 0.663688 TTTTAAGCGCTGGCACGAAA 59.336 45.000 12.58 3.35 43.41 3.46
672 695 0.663688 TTTAAGCGCTGGCACGAAAA 59.336 45.000 12.58 0.51 43.41 2.29
673 696 0.663688 TTAAGCGCTGGCACGAAAAA 59.336 45.000 12.58 0.00 43.41 1.94
693 716 5.592104 AAAAACATTTCGAAAGGACCTGT 57.408 34.783 27.48 17.35 0.00 4.00
694 717 5.592104 AAAACATTTCGAAAGGACCTGTT 57.408 34.783 27.48 21.64 33.28 3.16
695 718 4.568152 AACATTTCGAAAGGACCTGTTG 57.432 40.909 27.48 14.67 31.64 3.33
696 719 2.884639 ACATTTCGAAAGGACCTGTTGG 59.115 45.455 27.48 4.46 39.83 3.77
697 720 1.975660 TTTCGAAAGGACCTGTTGGG 58.024 50.000 6.47 0.00 41.89 4.12
698 721 0.109723 TTCGAAAGGACCTGTTGGGG 59.890 55.000 0.00 0.00 40.03 4.96
699 722 0.765135 TCGAAAGGACCTGTTGGGGA 60.765 55.000 0.00 0.00 40.03 4.81
700 723 0.605589 CGAAAGGACCTGTTGGGGAC 60.606 60.000 0.00 0.00 40.03 4.46
701 724 0.605589 GAAAGGACCTGTTGGGGACG 60.606 60.000 0.00 0.00 40.03 4.79
702 725 2.692273 AAAGGACCTGTTGGGGACGC 62.692 60.000 0.00 0.00 40.03 5.19
713 736 4.530857 GGGACGCGGGTGGAGATG 62.531 72.222 10.96 0.00 0.00 2.90
715 738 4.148825 GACGCGGGTGGAGATGCT 62.149 66.667 10.96 0.00 0.00 3.79
716 739 4.148825 ACGCGGGTGGAGATGCTC 62.149 66.667 12.47 0.00 0.00 4.26
717 740 3.842923 CGCGGGTGGAGATGCTCT 61.843 66.667 0.00 0.00 0.00 4.09
718 741 2.586792 GCGGGTGGAGATGCTCTT 59.413 61.111 0.00 0.00 0.00 2.85
719 742 1.823295 GCGGGTGGAGATGCTCTTA 59.177 57.895 0.00 0.00 0.00 2.10
720 743 0.249657 GCGGGTGGAGATGCTCTTAG 60.250 60.000 0.00 0.00 0.00 2.18
721 744 1.403814 CGGGTGGAGATGCTCTTAGA 58.596 55.000 0.00 0.00 0.00 2.10
722 745 1.967066 CGGGTGGAGATGCTCTTAGAT 59.033 52.381 0.00 0.00 0.00 1.98
723 746 3.157881 CGGGTGGAGATGCTCTTAGATA 58.842 50.000 0.00 0.00 0.00 1.98
724 747 3.766591 CGGGTGGAGATGCTCTTAGATAT 59.233 47.826 0.00 0.00 0.00 1.63
725 748 4.142271 CGGGTGGAGATGCTCTTAGATATC 60.142 50.000 0.00 0.00 0.00 1.63
726 749 5.022787 GGGTGGAGATGCTCTTAGATATCT 58.977 45.833 10.73 10.73 32.87 1.98
727 750 6.191315 GGGTGGAGATGCTCTTAGATATCTA 58.809 44.000 8.44 8.44 30.49 1.98
728 751 6.096282 GGGTGGAGATGCTCTTAGATATCTAC 59.904 46.154 12.12 10.24 32.32 2.59
729 752 6.096282 GGTGGAGATGCTCTTAGATATCTACC 59.904 46.154 12.12 7.48 35.24 3.18
730 753 6.889722 GTGGAGATGCTCTTAGATATCTACCT 59.110 42.308 12.12 1.92 30.95 3.08
731 754 7.067008 GTGGAGATGCTCTTAGATATCTACCTC 59.933 44.444 12.12 9.44 30.95 3.85
732 755 6.260050 GGAGATGCTCTTAGATATCTACCTCG 59.740 46.154 12.12 3.15 30.49 4.63
733 756 6.717289 AGATGCTCTTAGATATCTACCTCGT 58.283 40.000 12.12 3.93 0.00 4.18
734 757 6.821665 AGATGCTCTTAGATATCTACCTCGTC 59.178 42.308 12.12 11.54 0.00 4.20
735 758 6.116711 TGCTCTTAGATATCTACCTCGTCT 57.883 41.667 12.12 0.00 0.00 4.18
736 759 6.167685 TGCTCTTAGATATCTACCTCGTCTC 58.832 44.000 12.12 0.00 0.00 3.36
737 760 6.167685 GCTCTTAGATATCTACCTCGTCTCA 58.832 44.000 12.12 0.00 0.00 3.27
738 761 6.312918 GCTCTTAGATATCTACCTCGTCTCAG 59.687 46.154 12.12 4.26 0.00 3.35
739 762 7.305813 TCTTAGATATCTACCTCGTCTCAGT 57.694 40.000 12.12 0.00 0.00 3.41
740 763 7.737869 TCTTAGATATCTACCTCGTCTCAGTT 58.262 38.462 12.12 0.00 0.00 3.16
741 764 8.212312 TCTTAGATATCTACCTCGTCTCAGTTT 58.788 37.037 12.12 0.00 0.00 2.66
742 765 6.870971 AGATATCTACCTCGTCTCAGTTTC 57.129 41.667 2.53 0.00 0.00 2.78
743 766 6.358178 AGATATCTACCTCGTCTCAGTTTCA 58.642 40.000 2.53 0.00 0.00 2.69
744 767 4.705337 ATCTACCTCGTCTCAGTTTCAC 57.295 45.455 0.00 0.00 0.00 3.18
745 768 2.818432 TCTACCTCGTCTCAGTTTCACC 59.182 50.000 0.00 0.00 0.00 4.02
746 769 0.680061 ACCTCGTCTCAGTTTCACCC 59.320 55.000 0.00 0.00 0.00 4.61
747 770 0.037232 CCTCGTCTCAGTTTCACCCC 60.037 60.000 0.00 0.00 0.00 4.95
748 771 0.969894 CTCGTCTCAGTTTCACCCCT 59.030 55.000 0.00 0.00 0.00 4.79
749 772 2.168496 CTCGTCTCAGTTTCACCCCTA 58.832 52.381 0.00 0.00 0.00 3.53
750 773 1.891150 TCGTCTCAGTTTCACCCCTAC 59.109 52.381 0.00 0.00 0.00 3.18
751 774 1.067071 CGTCTCAGTTTCACCCCTACC 60.067 57.143 0.00 0.00 0.00 3.18
752 775 2.258109 GTCTCAGTTTCACCCCTACCT 58.742 52.381 0.00 0.00 0.00 3.08
753 776 3.438183 GTCTCAGTTTCACCCCTACCTA 58.562 50.000 0.00 0.00 0.00 3.08
754 777 3.447944 GTCTCAGTTTCACCCCTACCTAG 59.552 52.174 0.00 0.00 0.00 3.02
755 778 3.077088 TCTCAGTTTCACCCCTACCTAGT 59.923 47.826 0.00 0.00 0.00 2.57
756 779 3.170717 TCAGTTTCACCCCTACCTAGTG 58.829 50.000 0.00 0.00 0.00 2.74
757 780 2.236395 CAGTTTCACCCCTACCTAGTGG 59.764 54.545 0.00 0.00 39.83 4.00
758 781 1.558294 GTTTCACCCCTACCTAGTGGG 59.442 57.143 5.90 5.90 45.34 4.61
759 782 0.619543 TTCACCCCTACCTAGTGGGC 60.620 60.000 7.07 0.00 43.54 5.36
760 783 2.042230 ACCCCTACCTAGTGGGCG 60.042 66.667 7.07 4.33 43.54 6.13
761 784 2.281091 CCCCTACCTAGTGGGCGA 59.719 66.667 7.07 0.00 42.03 5.54
762 785 1.152312 CCCCTACCTAGTGGGCGAT 60.152 63.158 7.07 0.00 42.03 4.58
763 786 1.186267 CCCCTACCTAGTGGGCGATC 61.186 65.000 7.07 0.00 42.03 3.69
764 787 0.469331 CCCTACCTAGTGGGCGATCA 60.469 60.000 0.00 0.00 39.10 2.92
765 788 1.410004 CCTACCTAGTGGGCGATCAA 58.590 55.000 0.00 0.00 39.10 2.57
766 789 1.760613 CCTACCTAGTGGGCGATCAAA 59.239 52.381 0.00 0.00 39.10 2.69
767 790 2.224066 CCTACCTAGTGGGCGATCAAAG 60.224 54.545 0.00 0.00 39.10 2.77
768 791 0.541863 ACCTAGTGGGCGATCAAAGG 59.458 55.000 0.00 0.00 39.10 3.11
769 792 0.541863 CCTAGTGGGCGATCAAAGGT 59.458 55.000 0.00 0.00 0.00 3.50
770 793 1.656652 CTAGTGGGCGATCAAAGGTG 58.343 55.000 0.00 0.00 0.00 4.00
771 794 0.251916 TAGTGGGCGATCAAAGGTGG 59.748 55.000 0.00 0.00 0.00 4.61
782 805 1.710244 TCAAAGGTGGTCACATGGGAT 59.290 47.619 0.00 0.00 0.00 3.85
784 807 3.332187 TCAAAGGTGGTCACATGGGATTA 59.668 43.478 0.00 0.00 0.00 1.75
788 811 1.956477 GTGGTCACATGGGATTATGGC 59.044 52.381 0.00 0.00 32.32 4.40
815 838 1.447314 GGGCCGACAAACCGAGTAG 60.447 63.158 0.00 0.00 0.00 2.57
816 839 2.098831 GGCCGACAAACCGAGTAGC 61.099 63.158 0.00 0.00 0.00 3.58
817 840 2.098831 GCCGACAAACCGAGTAGCC 61.099 63.158 0.00 0.00 0.00 3.93
818 841 1.290955 CCGACAAACCGAGTAGCCA 59.709 57.895 0.00 0.00 0.00 4.75
819 842 1.012486 CCGACAAACCGAGTAGCCAC 61.012 60.000 0.00 0.00 0.00 5.01
820 843 1.012486 CGACAAACCGAGTAGCCACC 61.012 60.000 0.00 0.00 0.00 4.61
821 844 0.320697 GACAAACCGAGTAGCCACCT 59.679 55.000 0.00 0.00 0.00 4.00
934 963 0.884704 GCTGGCTGGACACTCGAAAA 60.885 55.000 0.00 0.00 0.00 2.29
1112 1142 4.233005 CCTACATCTACATGCATGTCGAG 58.767 47.826 34.54 26.16 41.97 4.04
1160 1191 1.203928 GATTGATGGTGCTCTCGTCG 58.796 55.000 0.00 0.00 0.00 5.12
1481 1512 4.129148 GAGGACACCATGGGGGCC 62.129 72.222 33.97 33.97 42.05 5.80
1779 1810 6.165577 GGTATGGTACCGTGAGACTTAAAAA 58.834 40.000 17.34 0.00 39.39 1.94
1784 1815 6.016943 TGGTACCGTGAGACTTAAAAATTTGG 60.017 38.462 7.57 0.00 0.00 3.28
1785 1816 6.205270 GGTACCGTGAGACTTAAAAATTTGGA 59.795 38.462 0.00 0.00 0.00 3.53
1786 1817 6.313744 ACCGTGAGACTTAAAAATTTGGAG 57.686 37.500 0.00 0.00 0.00 3.86
1788 1819 6.320418 ACCGTGAGACTTAAAAATTTGGAGTT 59.680 34.615 0.00 0.00 0.00 3.01
1789 1820 6.636850 CCGTGAGACTTAAAAATTTGGAGTTG 59.363 38.462 0.00 0.00 0.00 3.16
1790 1821 7.414436 CGTGAGACTTAAAAATTTGGAGTTGA 58.586 34.615 0.00 0.00 0.00 3.18
1791 1822 8.076178 CGTGAGACTTAAAAATTTGGAGTTGAT 58.924 33.333 0.00 0.00 0.00 2.57
1792 1823 9.185192 GTGAGACTTAAAAATTTGGAGTTGATG 57.815 33.333 0.00 0.00 0.00 3.07
1804 1835 4.991776 TGGAGTTGATGGTACCATGAAAA 58.008 39.130 32.07 18.99 36.70 2.29
1805 1836 5.579047 TGGAGTTGATGGTACCATGAAAAT 58.421 37.500 32.07 22.74 36.70 1.82
1806 1837 6.015918 TGGAGTTGATGGTACCATGAAAATT 58.984 36.000 32.07 17.54 36.70 1.82
1807 1838 6.496565 TGGAGTTGATGGTACCATGAAAATTT 59.503 34.615 32.07 15.19 36.70 1.82
1808 1839 7.016072 TGGAGTTGATGGTACCATGAAAATTTT 59.984 33.333 32.07 12.87 36.70 1.82
1809 1840 7.545615 GGAGTTGATGGTACCATGAAAATTTTC 59.454 37.037 32.07 21.60 36.70 2.29
1848 1879 6.183360 TGCTTATGCGTGCATATATGAATGAG 60.183 38.462 17.10 6.02 43.34 2.90
2014 2045 2.943978 CGACGGGCTCTGGAAGGTT 61.944 63.158 0.00 0.00 0.00 3.50
2175 2206 4.848562 CAACGATGCTACTCCTATACCA 57.151 45.455 0.00 0.00 0.00 3.25
2176 2207 5.392767 CAACGATGCTACTCCTATACCAT 57.607 43.478 0.00 0.00 0.00 3.55
2177 2208 5.403246 CAACGATGCTACTCCTATACCATC 58.597 45.833 0.00 0.00 0.00 3.51
2178 2209 4.663334 ACGATGCTACTCCTATACCATCA 58.337 43.478 0.00 0.00 31.78 3.07
2179 2210 5.265191 ACGATGCTACTCCTATACCATCAT 58.735 41.667 0.00 0.00 31.78 2.45
2190 2558 8.494433 ACTCCTATACCATCATGTATTTGTTGT 58.506 33.333 0.00 0.00 33.58 3.32
2191 2559 9.996554 CTCCTATACCATCATGTATTTGTTGTA 57.003 33.333 0.00 0.00 33.58 2.41
2192 2560 9.996554 TCCTATACCATCATGTATTTGTTGTAG 57.003 33.333 0.00 0.00 33.58 2.74
2200 2584 8.676401 CATCATGTATTTGTTGTAGGATGTCAA 58.324 33.333 0.00 0.00 0.00 3.18
2210 2594 1.883084 GGATGTCAAGCGCGTAGGG 60.883 63.158 8.43 0.00 46.11 3.53
2220 2604 2.677003 CGCGTAGGGCCAGTTTGTG 61.677 63.158 6.18 0.00 38.94 3.33
2239 2623 3.118261 TGTGGAAGGGATATGAGCTGAAC 60.118 47.826 0.00 0.00 0.00 3.18
2251 2635 2.872245 TGAGCTGAACTGTTTGCTGTAC 59.128 45.455 20.85 11.03 35.76 2.90
2252 2636 3.134458 GAGCTGAACTGTTTGCTGTACT 58.866 45.455 20.85 3.35 35.76 2.73
2253 2637 4.202212 TGAGCTGAACTGTTTGCTGTACTA 60.202 41.667 20.85 5.42 35.76 1.82
2254 2638 4.310769 AGCTGAACTGTTTGCTGTACTAG 58.689 43.478 17.03 0.00 34.19 2.57
2305 2692 7.805071 CACTGGACTGTTTGATGTAAAATTCTC 59.195 37.037 0.00 0.00 0.00 2.87
2322 2709 6.566197 AATTCTCGCTGAAGTTCAAATTCT 57.434 33.333 7.06 0.00 38.18 2.40
2342 2729 4.087182 TCTAGTAGCCTACACAGCACTTT 58.913 43.478 4.41 0.00 0.00 2.66
2396 2787 9.901172 AACCCTCTTAAATTCGTAAGTTCATAT 57.099 29.630 0.00 0.00 33.55 1.78
2465 2858 7.038587 TGCTTCGGTGGGTATGAGTATTATAAT 60.039 37.037 2.97 2.97 0.00 1.28
2497 2891 9.132521 GAACTTGTAGGAAATTGAAATGTCATG 57.867 33.333 0.00 0.00 32.48 3.07
2516 2910 8.308851 TGTCATGTATTTCAAATTCCATGGAT 57.691 30.769 17.06 0.00 32.56 3.41
2548 2942 7.038870 TGGAAAACATGATGTCCTTTGATTCAT 60.039 33.333 13.02 0.00 30.60 2.57
2549 2943 7.277098 GGAAAACATGATGTCCTTTGATTCATG 59.723 37.037 4.93 9.09 43.08 3.07
2553 2947 8.529424 ACATGATGTCCTTTGATTCATGTTAT 57.471 30.769 10.22 0.00 45.33 1.89
2554 2948 8.410912 ACATGATGTCCTTTGATTCATGTTATG 58.589 33.333 10.22 0.00 45.33 1.90
2559 2953 8.642935 TGTCCTTTGATTCATGTTATGGTTAA 57.357 30.769 0.00 0.00 0.00 2.01
2626 3020 8.561738 TTTTAGATGTCACATCTAAACTTCCC 57.438 34.615 36.79 5.27 45.11 3.97
2627 3021 5.762179 AGATGTCACATCTAAACTTCCCA 57.238 39.130 19.29 0.00 0.00 4.37
2628 3022 5.491982 AGATGTCACATCTAAACTTCCCAC 58.508 41.667 19.29 0.00 0.00 4.61
2629 3023 4.698201 TGTCACATCTAAACTTCCCACA 57.302 40.909 0.00 0.00 0.00 4.17
2630 3024 5.042463 TGTCACATCTAAACTTCCCACAA 57.958 39.130 0.00 0.00 0.00 3.33
2631 3025 5.441500 TGTCACATCTAAACTTCCCACAAA 58.558 37.500 0.00 0.00 0.00 2.83
2632 3026 6.068010 TGTCACATCTAAACTTCCCACAAAT 58.932 36.000 0.00 0.00 0.00 2.32
2633 3027 7.227873 TGTCACATCTAAACTTCCCACAAATA 58.772 34.615 0.00 0.00 0.00 1.40
2634 3028 7.888021 TGTCACATCTAAACTTCCCACAAATAT 59.112 33.333 0.00 0.00 0.00 1.28
2635 3029 9.391006 GTCACATCTAAACTTCCCACAAATATA 57.609 33.333 0.00 0.00 0.00 0.86
2699 3093 6.989169 AGACCACAAATAGAATAGACATCAGC 59.011 38.462 0.00 0.00 0.00 4.26
2700 3094 6.893583 ACCACAAATAGAATAGACATCAGCT 58.106 36.000 0.00 0.00 0.00 4.24
2701 3095 7.341805 ACCACAAATAGAATAGACATCAGCTT 58.658 34.615 0.00 0.00 0.00 3.74
2702 3096 8.486210 ACCACAAATAGAATAGACATCAGCTTA 58.514 33.333 0.00 0.00 0.00 3.09
2703 3097 8.986847 CCACAAATAGAATAGACATCAGCTTAG 58.013 37.037 0.00 0.00 0.00 2.18
2704 3098 9.755804 CACAAATAGAATAGACATCAGCTTAGA 57.244 33.333 0.00 0.00 0.00 2.10
2717 3111 7.783090 CATCAGCTTAGATGTGACAAACTAT 57.217 36.000 5.99 0.00 40.35 2.12
2718 3112 7.628235 CATCAGCTTAGATGTGACAAACTATG 58.372 38.462 5.99 1.03 40.35 2.23
2719 3113 7.279536 CATCAGCTTAGATGTGACAAACTATGT 59.720 37.037 5.99 0.00 41.72 2.29
2735 3129 9.155975 ACAAACTATGTCAAATCTAGATGTGTC 57.844 33.333 20.21 15.94 37.96 3.67
2736 3130 8.607459 CAAACTATGTCAAATCTAGATGTGTCC 58.393 37.037 20.21 13.41 0.00 4.02
2737 3131 7.667575 ACTATGTCAAATCTAGATGTGTCCT 57.332 36.000 20.21 11.64 0.00 3.85
2738 3132 8.768501 ACTATGTCAAATCTAGATGTGTCCTA 57.231 34.615 20.21 12.08 0.00 2.94
2739 3133 8.855110 ACTATGTCAAATCTAGATGTGTCCTAG 58.145 37.037 20.21 20.40 35.97 3.02
2740 3134 7.904558 ATGTCAAATCTAGATGTGTCCTAGA 57.095 36.000 20.21 2.74 44.50 2.43
2741 3135 7.101652 TGTCAAATCTAGATGTGTCCTAGAC 57.898 40.000 20.21 11.66 43.57 2.59
2742 3136 6.663523 TGTCAAATCTAGATGTGTCCTAGACA 59.336 38.462 20.21 13.79 43.57 3.41
2743 3137 7.148000 TGTCAAATCTAGATGTGTCCTAGACAG 60.148 40.741 20.21 0.00 43.57 3.51
2744 3138 7.067615 GTCAAATCTAGATGTGTCCTAGACAGA 59.932 40.741 20.21 0.00 43.57 3.41
2745 3139 6.952773 AATCTAGATGTGTCCTAGACAGAC 57.047 41.667 5.86 0.00 43.57 3.51
2746 3140 4.783055 TCTAGATGTGTCCTAGACAGACC 58.217 47.826 0.00 0.00 43.57 3.85
2747 3141 2.741145 AGATGTGTCCTAGACAGACCC 58.259 52.381 0.00 0.00 43.57 4.46
2748 3142 2.313342 AGATGTGTCCTAGACAGACCCT 59.687 50.000 0.00 0.00 43.57 4.34
2749 3143 3.528078 AGATGTGTCCTAGACAGACCCTA 59.472 47.826 0.00 0.00 43.57 3.53
2750 3144 4.169068 AGATGTGTCCTAGACAGACCCTAT 59.831 45.833 0.00 0.00 43.57 2.57
2751 3145 4.332683 TGTGTCCTAGACAGACCCTATT 57.667 45.455 0.00 0.00 43.57 1.73
2752 3146 4.684724 TGTGTCCTAGACAGACCCTATTT 58.315 43.478 0.00 0.00 43.57 1.40
2753 3147 5.091552 TGTGTCCTAGACAGACCCTATTTT 58.908 41.667 0.00 0.00 43.57 1.82
2754 3148 5.546499 TGTGTCCTAGACAGACCCTATTTTT 59.454 40.000 0.00 0.00 43.57 1.94
2782 3176 7.979786 TGAGTCTAGATTTTTATGGAGTCCT 57.020 36.000 11.33 0.00 0.00 3.85
2783 3177 8.380742 TGAGTCTAGATTTTTATGGAGTCCTT 57.619 34.615 11.33 6.78 0.00 3.36
2784 3178 8.826765 TGAGTCTAGATTTTTATGGAGTCCTTT 58.173 33.333 11.33 0.30 0.00 3.11
2785 3179 9.103861 GAGTCTAGATTTTTATGGAGTCCTTTG 57.896 37.037 11.33 0.00 0.00 2.77
2786 3180 8.826765 AGTCTAGATTTTTATGGAGTCCTTTGA 58.173 33.333 11.33 0.00 0.00 2.69
2787 3181 9.620259 GTCTAGATTTTTATGGAGTCCTTTGAT 57.380 33.333 11.33 0.00 0.00 2.57
2848 3242 9.635404 TTTTCATAGGAAAACAGAGACCTTAAA 57.365 29.630 11.06 0.00 45.51 1.52
2849 3243 9.635404 TTTCATAGGAAAACAGAGACCTTAAAA 57.365 29.630 0.00 0.00 39.96 1.52
2850 3244 8.848474 TCATAGGAAAACAGAGACCTTAAAAG 57.152 34.615 0.00 0.00 34.42 2.27
2851 3245 8.656806 TCATAGGAAAACAGAGACCTTAAAAGA 58.343 33.333 0.00 0.00 34.42 2.52
2852 3246 9.454859 CATAGGAAAACAGAGACCTTAAAAGAT 57.545 33.333 0.00 0.00 34.42 2.40
2855 3249 9.286170 AGGAAAACAGAGACCTTAAAAGATTAC 57.714 33.333 0.00 0.00 0.00 1.89
2856 3250 9.063615 GGAAAACAGAGACCTTAAAAGATTACA 57.936 33.333 0.00 0.00 0.00 2.41
2857 3251 9.880064 GAAAACAGAGACCTTAAAAGATTACAC 57.120 33.333 0.00 0.00 0.00 2.90
2858 3252 7.653767 AACAGAGACCTTAAAAGATTACACG 57.346 36.000 0.00 0.00 0.00 4.49
2859 3253 6.989659 ACAGAGACCTTAAAAGATTACACGA 58.010 36.000 0.00 0.00 0.00 4.35
2860 3254 7.439381 ACAGAGACCTTAAAAGATTACACGAA 58.561 34.615 0.00 0.00 0.00 3.85
2861 3255 8.095169 ACAGAGACCTTAAAAGATTACACGAAT 58.905 33.333 0.00 0.00 0.00 3.34
2862 3256 8.936864 CAGAGACCTTAAAAGATTACACGAATT 58.063 33.333 0.00 0.00 0.00 2.17
2863 3257 9.503399 AGAGACCTTAAAAGATTACACGAATTT 57.497 29.630 0.00 0.00 0.00 1.82
2900 3294 9.515020 AAAAGTACACTTACAATCAACACATTG 57.485 29.630 0.00 0.00 36.21 2.82
2901 3295 6.668323 AGTACACTTACAATCAACACATTGC 58.332 36.000 0.00 0.00 37.28 3.56
2902 3296 5.512753 ACACTTACAATCAACACATTGCA 57.487 34.783 0.00 0.00 37.28 4.08
2903 3297 6.088016 ACACTTACAATCAACACATTGCAT 57.912 33.333 0.00 0.00 37.28 3.96
2904 3298 6.514947 ACACTTACAATCAACACATTGCATT 58.485 32.000 0.00 0.00 37.28 3.56
2905 3299 6.985645 ACACTTACAATCAACACATTGCATTT 59.014 30.769 0.00 0.00 37.28 2.32
2906 3300 7.169645 ACACTTACAATCAACACATTGCATTTC 59.830 33.333 0.00 0.00 37.28 2.17
2907 3301 7.169476 CACTTACAATCAACACATTGCATTTCA 59.831 33.333 0.00 0.00 37.28 2.69
2908 3302 7.874016 ACTTACAATCAACACATTGCATTTCAT 59.126 29.630 0.00 0.00 37.28 2.57
2909 3303 6.474819 ACAATCAACACATTGCATTTCATG 57.525 33.333 0.00 0.00 37.28 3.07
2910 3304 5.992829 ACAATCAACACATTGCATTTCATGT 59.007 32.000 0.00 0.00 37.28 3.21
2911 3305 6.483974 ACAATCAACACATTGCATTTCATGTT 59.516 30.769 0.00 0.00 37.28 2.71
2912 3306 6.715344 ATCAACACATTGCATTTCATGTTC 57.285 33.333 0.00 0.00 35.63 3.18
2913 3307 5.845103 TCAACACATTGCATTTCATGTTCT 58.155 33.333 0.00 0.00 35.63 3.01
2914 3308 6.282167 TCAACACATTGCATTTCATGTTCTT 58.718 32.000 0.00 0.00 35.63 2.52
2915 3309 6.762187 TCAACACATTGCATTTCATGTTCTTT 59.238 30.769 0.00 0.00 35.63 2.52
2916 3310 7.280428 TCAACACATTGCATTTCATGTTCTTTT 59.720 29.630 0.00 0.00 35.63 2.27
2917 3311 8.549548 CAACACATTGCATTTCATGTTCTTTTA 58.450 29.630 0.00 0.00 0.00 1.52
2918 3312 8.836268 ACACATTGCATTTCATGTTCTTTTAT 57.164 26.923 0.00 0.00 0.00 1.40
2919 3313 9.275398 ACACATTGCATTTCATGTTCTTTTATT 57.725 25.926 0.00 0.00 0.00 1.40
2924 3318 9.638239 TTGCATTTCATGTTCTTTTATTAGGTC 57.362 29.630 0.00 0.00 0.00 3.85
2925 3319 8.801299 TGCATTTCATGTTCTTTTATTAGGTCA 58.199 29.630 0.00 0.00 0.00 4.02
2926 3320 9.638239 GCATTTCATGTTCTTTTATTAGGTCAA 57.362 29.630 0.00 0.00 0.00 3.18
2969 3363 8.344446 TCTAACTTTTTAATTGAAGGGTAGCC 57.656 34.615 1.60 1.60 0.00 3.93
2970 3364 8.168058 TCTAACTTTTTAATTGAAGGGTAGCCT 58.832 33.333 7.93 7.93 0.00 4.58
2971 3365 6.835819 ACTTTTTAATTGAAGGGTAGCCTC 57.164 37.500 15.24 8.59 0.00 4.70
2972 3366 6.552932 ACTTTTTAATTGAAGGGTAGCCTCT 58.447 36.000 15.24 4.61 0.00 3.69
2973 3367 7.696017 ACTTTTTAATTGAAGGGTAGCCTCTA 58.304 34.615 15.24 3.30 0.00 2.43
2974 3368 8.168058 ACTTTTTAATTGAAGGGTAGCCTCTAA 58.832 33.333 15.24 12.67 0.00 2.10
2975 3369 9.190317 CTTTTTAATTGAAGGGTAGCCTCTAAT 57.810 33.333 15.24 14.36 0.00 1.73
2976 3370 9.541884 TTTTTAATTGAAGGGTAGCCTCTAATT 57.458 29.630 25.74 25.74 0.00 1.40
2977 3371 9.541884 TTTTAATTGAAGGGTAGCCTCTAATTT 57.458 29.630 26.79 15.90 0.00 1.82
2978 3372 8.747538 TTAATTGAAGGGTAGCCTCTAATTTC 57.252 34.615 26.79 16.71 0.00 2.17
2979 3373 6.582929 ATTGAAGGGTAGCCTCTAATTTCT 57.417 37.500 15.24 0.00 0.00 2.52
2980 3374 7.691993 ATTGAAGGGTAGCCTCTAATTTCTA 57.308 36.000 15.24 4.35 0.00 2.10
2981 3375 6.481434 TGAAGGGTAGCCTCTAATTTCTAC 57.519 41.667 15.24 0.00 0.00 2.59
2982 3376 5.365895 TGAAGGGTAGCCTCTAATTTCTACC 59.634 44.000 15.24 8.38 46.34 3.18
2983 3377 5.159139 AGGGTAGCCTCTAATTTCTACCT 57.841 43.478 7.93 0.00 46.30 3.08
2984 3378 5.539842 AGGGTAGCCTCTAATTTCTACCTT 58.460 41.667 7.93 6.66 46.30 3.50
2985 3379 5.971260 AGGGTAGCCTCTAATTTCTACCTTT 59.029 40.000 7.93 4.06 46.30 3.11
2986 3380 7.137567 AGGGTAGCCTCTAATTTCTACCTTTA 58.862 38.462 7.93 0.00 46.30 1.85
2987 3381 7.626487 AGGGTAGCCTCTAATTTCTACCTTTAA 59.374 37.037 7.93 0.00 46.30 1.52
2988 3382 8.438373 GGGTAGCCTCTAATTTCTACCTTTAAT 58.562 37.037 14.58 0.00 46.30 1.40
2989 3383 9.491675 GGTAGCCTCTAATTTCTACCTTTAATC 57.508 37.037 9.37 0.00 44.63 1.75
2992 3386 7.717436 AGCCTCTAATTTCTACCTTTAATCTGC 59.283 37.037 0.00 0.00 0.00 4.26
2993 3387 7.499232 GCCTCTAATTTCTACCTTTAATCTGCA 59.501 37.037 0.00 0.00 0.00 4.41
2994 3388 9.566432 CCTCTAATTTCTACCTTTAATCTGCAT 57.434 33.333 0.00 0.00 0.00 3.96
2996 3390 9.261180 TCTAATTTCTACCTTTAATCTGCATCG 57.739 33.333 0.00 0.00 0.00 3.84
2997 3391 9.261180 CTAATTTCTACCTTTAATCTGCATCGA 57.739 33.333 0.00 0.00 0.00 3.59
2998 3392 8.506168 AATTTCTACCTTTAATCTGCATCGAA 57.494 30.769 0.00 0.00 0.00 3.71
2999 3393 7.915293 TTTCTACCTTTAATCTGCATCGAAA 57.085 32.000 0.00 0.00 0.00 3.46
3000 3394 8.506168 TTTCTACCTTTAATCTGCATCGAAAT 57.494 30.769 0.00 0.00 0.00 2.17
3001 3395 9.607988 TTTCTACCTTTAATCTGCATCGAAATA 57.392 29.630 0.00 0.00 0.00 1.40
3002 3396 9.778741 TTCTACCTTTAATCTGCATCGAAATAT 57.221 29.630 0.00 0.00 0.00 1.28
3003 3397 9.208022 TCTACCTTTAATCTGCATCGAAATATG 57.792 33.333 0.00 0.00 0.00 1.78
3004 3398 7.807977 ACCTTTAATCTGCATCGAAATATGT 57.192 32.000 0.00 0.00 0.00 2.29
3005 3399 8.902540 ACCTTTAATCTGCATCGAAATATGTA 57.097 30.769 0.00 0.00 0.00 2.29
3006 3400 9.337396 ACCTTTAATCTGCATCGAAATATGTAA 57.663 29.630 0.00 0.00 0.00 2.41
3013 3407 9.722056 ATCTGCATCGAAATATGTAAACTTTTC 57.278 29.630 0.00 0.00 0.00 2.29
3014 3408 8.946085 TCTGCATCGAAATATGTAAACTTTTCT 58.054 29.630 0.00 0.00 0.00 2.52
3021 3415 9.704098 CGAAATATGTAAACTTTTCTAAGGAGC 57.296 33.333 0.00 0.00 35.61 4.70
3026 3420 6.708285 TGTAAACTTTTCTAAGGAGCTAGGG 58.292 40.000 0.00 0.00 35.61 3.53
3027 3421 5.844773 AAACTTTTCTAAGGAGCTAGGGT 57.155 39.130 0.00 0.00 35.61 4.34
3028 3422 4.828072 ACTTTTCTAAGGAGCTAGGGTG 57.172 45.455 0.00 0.00 35.61 4.61
3029 3423 4.168883 ACTTTTCTAAGGAGCTAGGGTGT 58.831 43.478 0.00 0.00 35.61 4.16
3030 3424 5.339477 ACTTTTCTAAGGAGCTAGGGTGTA 58.661 41.667 0.00 0.00 35.61 2.90
3031 3425 5.422650 ACTTTTCTAAGGAGCTAGGGTGTAG 59.577 44.000 0.00 0.00 35.61 2.74
3032 3426 2.946785 TCTAAGGAGCTAGGGTGTAGC 58.053 52.381 0.00 0.00 40.67 3.58
3044 3438 6.786207 GCTAGGGTGTAGCTTAAGATTTTTG 58.214 40.000 6.67 0.00 37.56 2.44
3045 3439 6.598064 GCTAGGGTGTAGCTTAAGATTTTTGA 59.402 38.462 6.67 0.00 37.56 2.69
3046 3440 6.819397 AGGGTGTAGCTTAAGATTTTTGAC 57.181 37.500 6.67 0.00 0.00 3.18
3047 3441 5.411669 AGGGTGTAGCTTAAGATTTTTGACG 59.588 40.000 6.67 0.00 0.00 4.35
3048 3442 5.086727 GGTGTAGCTTAAGATTTTTGACGC 58.913 41.667 6.67 1.00 0.00 5.19
3049 3443 5.086727 GTGTAGCTTAAGATTTTTGACGCC 58.913 41.667 6.67 0.00 0.00 5.68
3050 3444 5.001232 TGTAGCTTAAGATTTTTGACGCCT 58.999 37.500 6.67 0.00 0.00 5.52
3051 3445 4.686839 AGCTTAAGATTTTTGACGCCTC 57.313 40.909 6.67 0.00 0.00 4.70
3052 3446 4.072131 AGCTTAAGATTTTTGACGCCTCA 58.928 39.130 6.67 0.00 0.00 3.86
3053 3447 4.702131 AGCTTAAGATTTTTGACGCCTCAT 59.298 37.500 6.67 0.00 0.00 2.90
3054 3448 5.183904 AGCTTAAGATTTTTGACGCCTCATT 59.816 36.000 6.67 0.00 0.00 2.57
3055 3449 5.513141 GCTTAAGATTTTTGACGCCTCATTC 59.487 40.000 6.67 0.00 0.00 2.67
3056 3450 6.567687 TTAAGATTTTTGACGCCTCATTCA 57.432 33.333 0.00 0.00 0.00 2.57
3057 3451 4.691860 AGATTTTTGACGCCTCATTCAG 57.308 40.909 0.00 0.00 0.00 3.02
3058 3452 3.441572 AGATTTTTGACGCCTCATTCAGG 59.558 43.478 0.00 0.00 46.82 3.86
3059 3453 2.270352 TTTTGACGCCTCATTCAGGT 57.730 45.000 0.00 0.00 45.61 4.00
3060 3454 3.410631 TTTTGACGCCTCATTCAGGTA 57.589 42.857 0.00 0.00 45.61 3.08
3061 3455 2.672961 TTGACGCCTCATTCAGGTAG 57.327 50.000 0.00 0.00 45.61 3.18
3062 3456 0.824109 TGACGCCTCATTCAGGTAGG 59.176 55.000 0.00 0.00 45.61 3.18
3068 3462 3.922171 CCTCATTCAGGTAGGCTTCTT 57.078 47.619 0.00 0.00 37.53 2.52
3069 3463 3.802866 CCTCATTCAGGTAGGCTTCTTC 58.197 50.000 0.00 0.00 37.53 2.87
3070 3464 3.454082 CCTCATTCAGGTAGGCTTCTTCT 59.546 47.826 0.00 0.00 37.53 2.85
3071 3465 4.651503 CCTCATTCAGGTAGGCTTCTTCTA 59.348 45.833 0.00 0.00 37.53 2.10
3072 3466 5.306678 CCTCATTCAGGTAGGCTTCTTCTAT 59.693 44.000 0.00 0.00 37.53 1.98
3073 3467 6.183361 CCTCATTCAGGTAGGCTTCTTCTATT 60.183 42.308 0.00 0.00 37.53 1.73
3074 3468 7.015682 CCTCATTCAGGTAGGCTTCTTCTATTA 59.984 40.741 0.00 0.00 37.53 0.98
3075 3469 8.319057 TCATTCAGGTAGGCTTCTTCTATTAA 57.681 34.615 0.00 0.00 0.00 1.40
3076 3470 8.768397 TCATTCAGGTAGGCTTCTTCTATTAAA 58.232 33.333 0.00 0.00 0.00 1.52
3077 3471 9.396022 CATTCAGGTAGGCTTCTTCTATTAAAA 57.604 33.333 0.00 0.00 0.00 1.52
3100 3494 9.733556 AAAATATGTTCTGATGGTAGTGTACAA 57.266 29.630 0.00 0.00 0.00 2.41
3101 3495 9.733556 AAATATGTTCTGATGGTAGTGTACAAA 57.266 29.630 0.00 0.00 0.00 2.83
3102 3496 8.948631 ATATGTTCTGATGGTAGTGTACAAAG 57.051 34.615 0.00 0.00 0.00 2.77
3103 3497 6.413783 TGTTCTGATGGTAGTGTACAAAGA 57.586 37.500 0.00 0.00 0.00 2.52
3104 3498 7.004555 TGTTCTGATGGTAGTGTACAAAGAT 57.995 36.000 0.00 0.00 0.00 2.40
3105 3499 7.097192 TGTTCTGATGGTAGTGTACAAAGATC 58.903 38.462 0.00 0.00 0.00 2.75
3106 3500 7.039011 TGTTCTGATGGTAGTGTACAAAGATCT 60.039 37.037 0.00 0.00 0.00 2.75
3107 3501 7.101652 TCTGATGGTAGTGTACAAAGATCTC 57.898 40.000 0.00 0.00 0.00 2.75
3108 3502 6.892456 TCTGATGGTAGTGTACAAAGATCTCT 59.108 38.462 0.00 0.00 0.00 3.10
3109 3503 7.397476 TCTGATGGTAGTGTACAAAGATCTCTT 59.603 37.037 0.00 0.00 37.91 2.85
3110 3504 7.907389 TGATGGTAGTGTACAAAGATCTCTTT 58.093 34.615 0.00 0.00 46.23 2.52
3111 3505 8.375506 TGATGGTAGTGTACAAAGATCTCTTTT 58.624 33.333 0.00 0.00 43.07 2.27
3112 3506 8.779354 ATGGTAGTGTACAAAGATCTCTTTTC 57.221 34.615 0.00 0.00 43.07 2.29
3113 3507 7.963532 TGGTAGTGTACAAAGATCTCTTTTCT 58.036 34.615 0.00 0.00 43.07 2.52
3114 3508 8.429641 TGGTAGTGTACAAAGATCTCTTTTCTT 58.570 33.333 0.00 0.00 43.07 2.52
3115 3509 9.924650 GGTAGTGTACAAAGATCTCTTTTCTTA 57.075 33.333 0.00 0.00 43.07 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.564352 CCTTCCTCTAGGCCCAAACAATT 60.564 47.826 0.00 0.00 34.44 2.32
38 39 5.046529 CACTCTAGCAACACATCATCTACC 58.953 45.833 0.00 0.00 0.00 3.18
49 50 2.630098 AGCTTCTGTCACTCTAGCAACA 59.370 45.455 0.00 0.00 34.37 3.33
77 78 6.258068 GCCTTACGAAGCAACTCATAAACTAT 59.742 38.462 0.00 0.00 0.00 2.12
102 103 5.008911 TGAAACATATGGATCCAAATCAGCG 59.991 40.000 20.67 5.87 33.21 5.18
157 158 5.984233 TTGTAAGCATCCGCAACTATAAG 57.016 39.130 0.00 0.00 42.27 1.73
160 161 4.997395 CCTATTGTAAGCATCCGCAACTAT 59.003 41.667 0.00 0.00 42.27 2.12
176 177 5.399038 CCCACTTATGATCAACCCCTATTGT 60.399 44.000 0.00 0.00 0.00 2.71
188 189 6.174720 TGGACAAGTATCCCACTTATGATC 57.825 41.667 0.00 0.00 46.04 2.92
203 204 1.215423 ACTGCCCTTTCTTGGACAAGT 59.785 47.619 11.44 0.00 39.38 3.16
224 225 2.666812 GTGGACCGGTACTTGGGG 59.333 66.667 19.95 1.43 0.00 4.96
262 263 5.611596 CGTTCATATGATTCGCGTTTGTTAG 59.388 40.000 6.17 0.00 0.00 2.34
356 367 6.495181 TGGTCCAATCCTTTTTGTAGCAAATA 59.505 34.615 0.00 0.00 0.00 1.40
357 368 5.306678 TGGTCCAATCCTTTTTGTAGCAAAT 59.693 36.000 0.00 0.00 0.00 2.32
378 401 1.973281 CAAGGTGCGGCAAGATGGT 60.973 57.895 3.23 0.00 0.00 3.55
401 424 7.798596 TGTAACGGGTAACAAGTAATGAAAA 57.201 32.000 0.00 0.00 39.74 2.29
477 500 7.067251 TGACAAACGGTTTTCAGTAAGGTATTT 59.933 33.333 2.79 0.00 0.00 1.40
497 520 4.074970 GAGGAGCAGAAGGAAATGACAAA 58.925 43.478 0.00 0.00 0.00 2.83
550 573 7.993183 CACAAGTGTAGGGGATTTATCATAGTT 59.007 37.037 0.00 0.00 0.00 2.24
589 612 1.443702 GGCCAAAATTGACGCCGAC 60.444 57.895 0.00 0.00 0.00 4.79
590 613 0.321741 TAGGCCAAAATTGACGCCGA 60.322 50.000 5.01 1.38 46.36 5.54
591 614 0.523966 TTAGGCCAAAATTGACGCCG 59.476 50.000 5.01 0.00 46.36 6.46
592 615 2.333926 GTTTAGGCCAAAATTGACGCC 58.666 47.619 5.01 5.57 41.96 5.68
593 616 2.333926 GGTTTAGGCCAAAATTGACGC 58.666 47.619 5.01 0.00 0.00 5.19
594 617 2.591133 CGGTTTAGGCCAAAATTGACG 58.409 47.619 5.01 0.00 0.00 4.35
595 618 2.954316 CCGGTTTAGGCCAAAATTGAC 58.046 47.619 5.01 0.00 0.00 3.18
606 629 1.494189 CGTGTTTCGCCGGTTTAGG 59.506 57.895 1.90 0.00 0.00 2.69
607 630 0.945265 TCCGTGTTTCGCCGGTTTAG 60.945 55.000 1.90 0.00 44.51 1.85
608 631 1.068753 TCCGTGTTTCGCCGGTTTA 59.931 52.632 1.90 0.00 44.51 2.01
609 632 2.203042 TCCGTGTTTCGCCGGTTT 60.203 55.556 1.90 0.00 44.51 3.27
610 633 2.968697 GTCCGTGTTTCGCCGGTT 60.969 61.111 1.90 0.00 44.51 4.44
611 634 3.853597 GAGTCCGTGTTTCGCCGGT 62.854 63.158 1.90 0.00 44.51 5.28
612 635 3.110178 GAGTCCGTGTTTCGCCGG 61.110 66.667 0.00 0.00 45.55 6.13
613 636 2.203972 TAGGAGTCCGTGTTTCGCCG 62.204 60.000 2.76 0.00 38.35 6.46
614 637 0.037975 TTAGGAGTCCGTGTTTCGCC 60.038 55.000 2.76 0.00 38.35 5.54
615 638 1.347320 CTTAGGAGTCCGTGTTTCGC 58.653 55.000 2.76 0.00 38.35 4.70
616 639 1.542915 TCCTTAGGAGTCCGTGTTTCG 59.457 52.381 2.76 0.00 39.52 3.46
617 640 2.670509 CGTCCTTAGGAGTCCGTGTTTC 60.671 54.545 0.00 0.00 29.39 2.78
618 641 1.271656 CGTCCTTAGGAGTCCGTGTTT 59.728 52.381 0.00 0.00 29.39 2.83
619 642 0.886563 CGTCCTTAGGAGTCCGTGTT 59.113 55.000 0.00 0.00 29.39 3.32
620 643 1.593296 GCGTCCTTAGGAGTCCGTGT 61.593 60.000 0.00 0.00 29.39 4.49
621 644 1.139095 GCGTCCTTAGGAGTCCGTG 59.861 63.158 0.00 0.00 29.39 4.94
622 645 2.404995 CGCGTCCTTAGGAGTCCGT 61.405 63.158 0.00 0.00 29.39 4.69
623 646 2.110967 TCGCGTCCTTAGGAGTCCG 61.111 63.158 5.77 3.01 29.39 4.79
624 647 1.031029 AGTCGCGTCCTTAGGAGTCC 61.031 60.000 5.77 0.00 29.39 3.85
625 648 0.099082 CAGTCGCGTCCTTAGGAGTC 59.901 60.000 5.77 0.00 29.39 3.36
626 649 0.322277 TCAGTCGCGTCCTTAGGAGT 60.322 55.000 5.77 0.00 29.39 3.85
627 650 0.809385 TTCAGTCGCGTCCTTAGGAG 59.191 55.000 5.77 0.00 29.39 3.69
628 651 0.524862 GTTCAGTCGCGTCCTTAGGA 59.475 55.000 5.77 0.00 0.00 2.94
629 652 0.458025 GGTTCAGTCGCGTCCTTAGG 60.458 60.000 5.77 0.00 0.00 2.69
630 653 0.797249 CGGTTCAGTCGCGTCCTTAG 60.797 60.000 5.77 0.00 0.00 2.18
631 654 1.210931 CGGTTCAGTCGCGTCCTTA 59.789 57.895 5.77 0.00 0.00 2.69
632 655 1.874345 ATCGGTTCAGTCGCGTCCTT 61.874 55.000 5.77 0.00 0.00 3.36
633 656 1.874345 AATCGGTTCAGTCGCGTCCT 61.874 55.000 5.77 0.00 0.00 3.85
634 657 1.012486 AAATCGGTTCAGTCGCGTCC 61.012 55.000 5.77 0.00 0.00 4.79
635 658 0.788391 AAAATCGGTTCAGTCGCGTC 59.212 50.000 5.77 0.00 0.00 5.19
636 659 1.223187 AAAAATCGGTTCAGTCGCGT 58.777 45.000 5.77 0.00 0.00 6.01
637 660 3.404564 CTTAAAAATCGGTTCAGTCGCG 58.595 45.455 0.00 0.00 0.00 5.87
638 661 3.161306 GCTTAAAAATCGGTTCAGTCGC 58.839 45.455 0.00 0.00 0.00 5.19
639 662 3.404564 CGCTTAAAAATCGGTTCAGTCG 58.595 45.455 0.00 0.00 0.00 4.18
640 663 3.120304 AGCGCTTAAAAATCGGTTCAGTC 60.120 43.478 2.64 0.00 0.00 3.51
641 664 2.812011 AGCGCTTAAAAATCGGTTCAGT 59.188 40.909 2.64 0.00 0.00 3.41
642 665 3.163594 CAGCGCTTAAAAATCGGTTCAG 58.836 45.455 7.50 0.00 0.00 3.02
643 666 2.095466 CCAGCGCTTAAAAATCGGTTCA 60.095 45.455 7.50 0.00 0.00 3.18
644 667 2.515912 CCAGCGCTTAAAAATCGGTTC 58.484 47.619 7.50 0.00 0.00 3.62
645 668 1.402325 GCCAGCGCTTAAAAATCGGTT 60.402 47.619 7.50 0.00 0.00 4.44
646 669 0.170339 GCCAGCGCTTAAAAATCGGT 59.830 50.000 7.50 0.00 0.00 4.69
647 670 0.170116 TGCCAGCGCTTAAAAATCGG 59.830 50.000 7.50 4.08 35.36 4.18
648 671 1.259316 GTGCCAGCGCTTAAAAATCG 58.741 50.000 7.50 0.00 35.36 3.34
649 672 1.135803 TCGTGCCAGCGCTTAAAAATC 60.136 47.619 7.50 0.00 35.36 2.17
650 673 0.878416 TCGTGCCAGCGCTTAAAAAT 59.122 45.000 7.50 0.00 35.36 1.82
651 674 0.663688 TTCGTGCCAGCGCTTAAAAA 59.336 45.000 7.50 0.00 35.36 1.94
652 675 0.663688 TTTCGTGCCAGCGCTTAAAA 59.336 45.000 7.50 0.00 35.36 1.52
653 676 0.663688 TTTTCGTGCCAGCGCTTAAA 59.336 45.000 7.50 0.00 35.36 1.52
654 677 0.663688 TTTTTCGTGCCAGCGCTTAA 59.336 45.000 7.50 0.00 35.36 1.85
655 678 2.322212 TTTTTCGTGCCAGCGCTTA 58.678 47.368 7.50 0.00 35.36 3.09
656 679 3.115556 TTTTTCGTGCCAGCGCTT 58.884 50.000 7.50 0.00 35.36 4.68
671 694 5.592104 ACAGGTCCTTTCGAAATGTTTTT 57.408 34.783 11.70 0.00 0.00 1.94
672 695 5.348164 CAACAGGTCCTTTCGAAATGTTTT 58.652 37.500 19.14 3.01 32.00 2.43
673 696 4.202111 CCAACAGGTCCTTTCGAAATGTTT 60.202 41.667 19.14 7.06 32.00 2.83
674 697 3.317993 CCAACAGGTCCTTTCGAAATGTT 59.682 43.478 17.00 17.00 33.70 2.71
675 698 2.884639 CCAACAGGTCCTTTCGAAATGT 59.115 45.455 11.70 9.56 0.00 2.71
676 699 2.228822 CCCAACAGGTCCTTTCGAAATG 59.771 50.000 11.70 9.02 0.00 2.32
677 700 2.514803 CCCAACAGGTCCTTTCGAAAT 58.485 47.619 11.70 0.00 0.00 2.17
678 701 1.477923 CCCCAACAGGTCCTTTCGAAA 60.478 52.381 10.71 10.71 0.00 3.46
679 702 0.109723 CCCCAACAGGTCCTTTCGAA 59.890 55.000 0.00 0.00 0.00 3.71
680 703 0.765135 TCCCCAACAGGTCCTTTCGA 60.765 55.000 0.00 0.00 0.00 3.71
681 704 0.605589 GTCCCCAACAGGTCCTTTCG 60.606 60.000 0.00 0.00 0.00 3.46
682 705 0.605589 CGTCCCCAACAGGTCCTTTC 60.606 60.000 0.00 0.00 0.00 2.62
683 706 1.454539 CGTCCCCAACAGGTCCTTT 59.545 57.895 0.00 0.00 0.00 3.11
684 707 3.157680 CGTCCCCAACAGGTCCTT 58.842 61.111 0.00 0.00 0.00 3.36
685 708 3.637273 GCGTCCCCAACAGGTCCT 61.637 66.667 0.00 0.00 0.00 3.85
696 719 4.530857 CATCTCCACCCGCGTCCC 62.531 72.222 4.92 0.00 0.00 4.46
698 721 4.148825 AGCATCTCCACCCGCGTC 62.149 66.667 4.92 0.00 0.00 5.19
699 722 4.148825 GAGCATCTCCACCCGCGT 62.149 66.667 4.92 0.00 0.00 6.01
710 733 6.821665 AGACGAGGTAGATATCTAAGAGCATC 59.178 42.308 14.09 8.07 0.00 3.91
711 734 6.717289 AGACGAGGTAGATATCTAAGAGCAT 58.283 40.000 14.09 0.00 0.00 3.79
712 735 6.116711 AGACGAGGTAGATATCTAAGAGCA 57.883 41.667 14.09 0.00 0.00 4.26
713 736 6.167685 TGAGACGAGGTAGATATCTAAGAGC 58.832 44.000 14.09 4.64 0.00 4.09
714 737 7.383687 ACTGAGACGAGGTAGATATCTAAGAG 58.616 42.308 14.09 8.66 0.00 2.85
715 738 7.305813 ACTGAGACGAGGTAGATATCTAAGA 57.694 40.000 14.09 0.00 0.00 2.10
716 739 7.972832 AACTGAGACGAGGTAGATATCTAAG 57.027 40.000 14.09 7.28 0.00 2.18
717 740 7.991460 TGAAACTGAGACGAGGTAGATATCTAA 59.009 37.037 14.09 0.00 0.00 2.10
718 741 7.441760 GTGAAACTGAGACGAGGTAGATATCTA 59.558 40.741 8.44 8.44 0.00 1.98
719 742 6.261381 GTGAAACTGAGACGAGGTAGATATCT 59.739 42.308 10.73 10.73 0.00 1.98
720 743 6.432107 GTGAAACTGAGACGAGGTAGATATC 58.568 44.000 0.00 0.00 0.00 1.63
721 744 5.299782 GGTGAAACTGAGACGAGGTAGATAT 59.700 44.000 0.00 0.00 36.74 1.63
722 745 4.639310 GGTGAAACTGAGACGAGGTAGATA 59.361 45.833 0.00 0.00 36.74 1.98
723 746 3.444388 GGTGAAACTGAGACGAGGTAGAT 59.556 47.826 0.00 0.00 36.74 1.98
724 747 2.818432 GGTGAAACTGAGACGAGGTAGA 59.182 50.000 0.00 0.00 36.74 2.59
725 748 2.094649 GGGTGAAACTGAGACGAGGTAG 60.095 54.545 0.00 0.00 36.74 3.18
726 749 1.891150 GGGTGAAACTGAGACGAGGTA 59.109 52.381 0.00 0.00 36.74 3.08
727 750 0.680061 GGGTGAAACTGAGACGAGGT 59.320 55.000 0.00 0.00 36.74 3.85
728 751 0.037232 GGGGTGAAACTGAGACGAGG 60.037 60.000 0.00 0.00 36.74 4.63
729 752 0.969894 AGGGGTGAAACTGAGACGAG 59.030 55.000 0.00 0.00 36.74 4.18
730 753 1.891150 GTAGGGGTGAAACTGAGACGA 59.109 52.381 0.00 0.00 36.74 4.20
731 754 1.067071 GGTAGGGGTGAAACTGAGACG 60.067 57.143 0.00 0.00 36.74 4.18
732 755 2.258109 AGGTAGGGGTGAAACTGAGAC 58.742 52.381 0.00 0.00 36.74 3.36
733 756 2.715763 AGGTAGGGGTGAAACTGAGA 57.284 50.000 0.00 0.00 36.74 3.27
734 757 3.195825 CACTAGGTAGGGGTGAAACTGAG 59.804 52.174 0.00 0.00 36.74 3.35
735 758 3.170717 CACTAGGTAGGGGTGAAACTGA 58.829 50.000 0.00 0.00 36.74 3.41
736 759 2.236395 CCACTAGGTAGGGGTGAAACTG 59.764 54.545 0.00 0.00 42.08 3.16
737 760 2.547990 CCACTAGGTAGGGGTGAAACT 58.452 52.381 0.00 0.00 42.08 2.66
738 761 1.558294 CCCACTAGGTAGGGGTGAAAC 59.442 57.143 4.57 0.00 45.67 2.78
739 762 1.961133 CCCACTAGGTAGGGGTGAAA 58.039 55.000 4.57 0.00 45.67 2.69
740 763 0.619543 GCCCACTAGGTAGGGGTGAA 60.620 60.000 16.20 0.00 45.67 3.18
741 764 1.002533 GCCCACTAGGTAGGGGTGA 59.997 63.158 16.20 0.00 45.67 4.02
742 765 2.432300 CGCCCACTAGGTAGGGGTG 61.432 68.421 16.20 12.75 45.67 4.61
743 766 1.957822 ATCGCCCACTAGGTAGGGGT 61.958 60.000 16.20 0.00 45.67 4.95
744 767 1.152312 ATCGCCCACTAGGTAGGGG 60.152 63.158 16.20 11.59 46.70 4.79
746 769 1.410004 TTGATCGCCCACTAGGTAGG 58.590 55.000 0.00 0.00 38.26 3.18
747 770 2.224066 CCTTTGATCGCCCACTAGGTAG 60.224 54.545 0.00 0.00 38.26 3.18
748 771 1.760613 CCTTTGATCGCCCACTAGGTA 59.239 52.381 0.00 0.00 38.26 3.08
749 772 0.541863 CCTTTGATCGCCCACTAGGT 59.458 55.000 0.00 0.00 38.26 3.08
750 773 0.541863 ACCTTTGATCGCCCACTAGG 59.458 55.000 0.00 0.00 39.47 3.02
751 774 1.656652 CACCTTTGATCGCCCACTAG 58.343 55.000 0.00 0.00 0.00 2.57
752 775 0.251916 CCACCTTTGATCGCCCACTA 59.748 55.000 0.00 0.00 0.00 2.74
753 776 1.002134 CCACCTTTGATCGCCCACT 60.002 57.895 0.00 0.00 0.00 4.00
754 777 1.303317 ACCACCTTTGATCGCCCAC 60.303 57.895 0.00 0.00 0.00 4.61
755 778 1.002624 GACCACCTTTGATCGCCCA 60.003 57.895 0.00 0.00 0.00 5.36
756 779 1.002624 TGACCACCTTTGATCGCCC 60.003 57.895 0.00 0.00 0.00 6.13
757 780 0.605319 TGTGACCACCTTTGATCGCC 60.605 55.000 0.00 0.00 0.00 5.54
758 781 1.131126 CATGTGACCACCTTTGATCGC 59.869 52.381 0.00 0.00 0.00 4.58
759 782 1.739466 CCATGTGACCACCTTTGATCG 59.261 52.381 0.00 0.00 0.00 3.69
760 783 2.094675 CCCATGTGACCACCTTTGATC 58.905 52.381 0.00 0.00 0.00 2.92
761 784 1.710244 TCCCATGTGACCACCTTTGAT 59.290 47.619 0.00 0.00 0.00 2.57
762 785 1.144691 TCCCATGTGACCACCTTTGA 58.855 50.000 0.00 0.00 0.00 2.69
763 786 2.220653 ATCCCATGTGACCACCTTTG 57.779 50.000 0.00 0.00 0.00 2.77
764 787 2.999185 AATCCCATGTGACCACCTTT 57.001 45.000 0.00 0.00 0.00 3.11
765 788 3.373001 CCATAATCCCATGTGACCACCTT 60.373 47.826 0.00 0.00 0.00 3.50
766 789 2.175499 CCATAATCCCATGTGACCACCT 59.825 50.000 0.00 0.00 0.00 4.00
767 790 2.586425 CCATAATCCCATGTGACCACC 58.414 52.381 0.00 0.00 0.00 4.61
768 791 1.956477 GCCATAATCCCATGTGACCAC 59.044 52.381 0.00 0.00 0.00 4.16
769 792 1.568123 TGCCATAATCCCATGTGACCA 59.432 47.619 0.00 0.00 0.00 4.02
770 793 2.363306 TGCCATAATCCCATGTGACC 57.637 50.000 0.00 0.00 0.00 4.02
771 794 2.035066 GCTTGCCATAATCCCATGTGAC 59.965 50.000 0.00 0.00 0.00 3.67
800 823 1.012486 GTGGCTACTCGGTTTGTCGG 61.012 60.000 0.00 0.00 0.00 4.79
806 829 1.988406 GGGAGGTGGCTACTCGGTT 60.988 63.158 0.00 0.00 35.82 4.44
816 839 4.410400 GTCCGGCTTGGGAGGTGG 62.410 72.222 0.00 0.00 36.58 4.61
817 840 4.410400 GGTCCGGCTTGGGAGGTG 62.410 72.222 0.00 0.00 36.58 4.00
951 980 3.365969 GGGCTCCATTTTAAACTCGTGTG 60.366 47.826 0.00 0.00 0.00 3.82
1061 1090 1.578206 GAGCCGTTCAAGCAGGGAAC 61.578 60.000 5.40 5.40 40.89 3.62
1062 1091 1.302511 GAGCCGTTCAAGCAGGGAA 60.303 57.895 0.00 0.00 0.00 3.97
1481 1512 4.578898 TGGTAGGCGCGCCGTATG 62.579 66.667 41.70 0.00 41.95 2.39
1727 1758 2.579738 GTGACGAAGCCTCCCCTC 59.420 66.667 0.00 0.00 0.00 4.30
1774 1805 7.841282 TGGTACCATCAACTCCAAATTTTTA 57.159 32.000 11.60 0.00 0.00 1.52
1779 1810 5.191727 TCATGGTACCATCAACTCCAAAT 57.808 39.130 24.99 0.00 33.90 2.32
1784 1815 8.087750 TGAAAATTTTCATGGTACCATCAACTC 58.912 33.333 26.01 12.79 41.88 3.01
1785 1816 7.961351 TGAAAATTTTCATGGTACCATCAACT 58.039 30.769 26.01 11.64 41.88 3.16
1804 1835 5.236773 AGCAACCGCATCAGCATGAAAAT 62.237 43.478 0.00 0.00 42.87 1.82
1805 1836 3.974476 AGCAACCGCATCAGCATGAAAA 61.974 45.455 0.00 0.00 42.87 2.29
1806 1837 2.491732 AGCAACCGCATCAGCATGAAA 61.492 47.619 0.00 0.00 42.87 2.69
1807 1838 0.961857 AGCAACCGCATCAGCATGAA 60.962 50.000 0.00 0.00 42.87 2.57
1808 1839 0.961857 AAGCAACCGCATCAGCATGA 60.962 50.000 0.00 0.00 43.58 3.07
1809 1840 0.734309 TAAGCAACCGCATCAGCATG 59.266 50.000 0.00 0.00 42.27 4.06
1848 1879 1.745489 GGCACGTCCCCTGATCAAC 60.745 63.158 0.00 0.00 0.00 3.18
2014 2045 1.622607 CGGCCTCCTGGTTGGACATA 61.623 60.000 13.11 0.00 40.56 2.29
2100 2131 4.778143 CGTCCTTGCTTCCCCGGG 62.778 72.222 15.80 15.80 0.00 5.73
2165 2196 8.908786 ACAACAAATACATGATGGTATAGGAG 57.091 34.615 0.00 0.00 32.95 3.69
2166 2197 9.996554 CTACAACAAATACATGATGGTATAGGA 57.003 33.333 0.00 0.00 32.95 2.94
2168 2199 9.996554 TCCTACAACAAATACATGATGGTATAG 57.003 33.333 0.00 0.00 32.95 1.31
2172 2203 7.118723 ACATCCTACAACAAATACATGATGGT 58.881 34.615 0.00 0.00 33.23 3.55
2173 2204 7.282901 TGACATCCTACAACAAATACATGATGG 59.717 37.037 0.00 0.00 33.23 3.51
2175 2206 8.806429 TTGACATCCTACAACAAATACATGAT 57.194 30.769 0.00 0.00 0.00 2.45
2176 2207 7.148255 GCTTGACATCCTACAACAAATACATGA 60.148 37.037 0.00 0.00 0.00 3.07
2177 2208 6.968904 GCTTGACATCCTACAACAAATACATG 59.031 38.462 0.00 0.00 0.00 3.21
2178 2209 6.183360 CGCTTGACATCCTACAACAAATACAT 60.183 38.462 0.00 0.00 0.00 2.29
2179 2210 5.121611 CGCTTGACATCCTACAACAAATACA 59.878 40.000 0.00 0.00 0.00 2.29
2190 2558 0.384309 CCTACGCGCTTGACATCCTA 59.616 55.000 5.73 0.00 0.00 2.94
2191 2559 1.141881 CCTACGCGCTTGACATCCT 59.858 57.895 5.73 0.00 0.00 3.24
2192 2560 1.883084 CCCTACGCGCTTGACATCC 60.883 63.158 5.73 0.00 0.00 3.51
2200 2584 4.016706 AAACTGGCCCTACGCGCT 62.017 61.111 5.73 0.00 38.94 5.92
2210 2594 2.507407 TATCCCTTCCACAAACTGGC 57.493 50.000 0.00 0.00 40.39 4.85
2220 2604 3.135530 ACAGTTCAGCTCATATCCCTTCC 59.864 47.826 0.00 0.00 0.00 3.46
2228 2612 3.743521 ACAGCAAACAGTTCAGCTCATA 58.256 40.909 9.61 0.00 34.61 2.15
2229 2613 2.579873 ACAGCAAACAGTTCAGCTCAT 58.420 42.857 9.61 0.78 34.61 2.90
2261 2645 4.380531 CAGTGCACTTCCTTTCTGTAAGA 58.619 43.478 18.94 0.00 44.68 2.10
2305 2692 5.220491 GGCTACTAGAATTTGAACTTCAGCG 60.220 44.000 0.00 0.00 0.00 5.18
2322 2709 4.884668 AAAAGTGCTGTGTAGGCTACTA 57.115 40.909 24.07 12.90 0.00 1.82
2354 2741 9.802039 TTAAGAGGGTTTTTATAAGAGCTGAAA 57.198 29.630 0.00 0.00 0.00 2.69
2396 2787 6.873076 AGCAACAAACAAGATTTGAAACTTCA 59.127 30.769 6.40 0.00 34.92 3.02
2433 2824 0.988832 TACCCACCGAAGCAAAGGAT 59.011 50.000 0.00 0.00 0.00 3.24
2510 2904 6.964807 TCATGTTTTCCATTCCTATCCATG 57.035 37.500 0.00 0.00 0.00 3.66
2511 2905 7.071273 ACATCATGTTTTCCATTCCTATCCAT 58.929 34.615 0.00 0.00 0.00 3.41
2512 2906 6.434302 ACATCATGTTTTCCATTCCTATCCA 58.566 36.000 0.00 0.00 0.00 3.41
2513 2907 6.015940 GGACATCATGTTTTCCATTCCTATCC 60.016 42.308 4.40 0.00 0.00 2.59
2516 2910 6.078456 AGGACATCATGTTTTCCATTCCTA 57.922 37.500 10.80 0.00 35.98 2.94
2523 2917 6.690530 TGAATCAAAGGACATCATGTTTTCC 58.309 36.000 0.00 1.30 0.00 3.13
2524 2918 8.181487 CATGAATCAAAGGACATCATGTTTTC 57.819 34.615 0.00 0.00 41.38 2.29
2529 2923 7.865889 CCATAACATGAATCAAAGGACATCATG 59.134 37.037 0.00 11.36 46.26 3.07
2530 2924 7.562454 ACCATAACATGAATCAAAGGACATCAT 59.438 33.333 0.00 0.00 34.80 2.45
2600 2994 9.010029 GGGAAGTTTAGATGTGACATCTAAAAA 57.990 33.333 40.36 29.11 46.14 1.94
2601 2995 8.160765 TGGGAAGTTTAGATGTGACATCTAAAA 58.839 33.333 40.36 29.05 46.14 1.52
2602 2996 7.606456 GTGGGAAGTTTAGATGTGACATCTAAA 59.394 37.037 37.63 37.63 43.99 1.85
2603 2997 7.103641 GTGGGAAGTTTAGATGTGACATCTAA 58.896 38.462 32.89 32.89 38.44 2.10
2604 2998 6.212589 TGTGGGAAGTTTAGATGTGACATCTA 59.787 38.462 26.66 26.66 0.00 1.98
2605 2999 5.013079 TGTGGGAAGTTTAGATGTGACATCT 59.987 40.000 28.69 28.69 0.00 2.90
2606 3000 5.245531 TGTGGGAAGTTTAGATGTGACATC 58.754 41.667 17.46 17.46 0.00 3.06
2607 3001 5.241403 TGTGGGAAGTTTAGATGTGACAT 57.759 39.130 0.00 0.00 0.00 3.06
2608 3002 4.698201 TGTGGGAAGTTTAGATGTGACA 57.302 40.909 0.00 0.00 0.00 3.58
2609 3003 6.575162 ATTTGTGGGAAGTTTAGATGTGAC 57.425 37.500 0.00 0.00 0.00 3.67
2673 3067 8.144478 GCTGATGTCTATTCTATTTGTGGTCTA 58.856 37.037 0.00 0.00 0.00 2.59
2674 3068 6.989169 GCTGATGTCTATTCTATTTGTGGTCT 59.011 38.462 0.00 0.00 0.00 3.85
2675 3069 6.989169 AGCTGATGTCTATTCTATTTGTGGTC 59.011 38.462 0.00 0.00 0.00 4.02
2676 3070 6.893583 AGCTGATGTCTATTCTATTTGTGGT 58.106 36.000 0.00 0.00 0.00 4.16
2677 3071 7.798596 AAGCTGATGTCTATTCTATTTGTGG 57.201 36.000 0.00 0.00 0.00 4.17
2678 3072 9.755804 TCTAAGCTGATGTCTATTCTATTTGTG 57.244 33.333 0.00 0.00 0.00 3.33
2693 3087 7.279536 ACATAGTTTGTCACATCTAAGCTGATG 59.720 37.037 11.48 11.48 41.04 3.07
2694 3088 7.334090 ACATAGTTTGTCACATCTAAGCTGAT 58.666 34.615 0.00 0.00 30.89 2.90
2695 3089 6.701340 ACATAGTTTGTCACATCTAAGCTGA 58.299 36.000 0.00 0.00 30.89 4.26
2696 3090 6.974932 ACATAGTTTGTCACATCTAAGCTG 57.025 37.500 0.00 0.00 30.89 4.24
2709 3103 9.155975 GACACATCTAGATTTGACATAGTTTGT 57.844 33.333 22.67 3.70 42.79 2.83
2710 3104 8.607459 GGACACATCTAGATTTGACATAGTTTG 58.393 37.037 22.67 3.09 0.00 2.93
2711 3105 8.543774 AGGACACATCTAGATTTGACATAGTTT 58.456 33.333 22.67 0.66 0.00 2.66
2712 3106 8.083828 AGGACACATCTAGATTTGACATAGTT 57.916 34.615 22.67 1.34 0.00 2.24
2713 3107 7.667575 AGGACACATCTAGATTTGACATAGT 57.332 36.000 22.67 4.32 0.00 2.12
2714 3108 9.072375 TCTAGGACACATCTAGATTTGACATAG 57.928 37.037 24.30 24.30 38.50 2.23
2715 3109 8.851145 GTCTAGGACACATCTAGATTTGACATA 58.149 37.037 22.67 17.15 43.25 2.29
2716 3110 7.343057 TGTCTAGGACACATCTAGATTTGACAT 59.657 37.037 22.67 16.96 43.25 3.06
2717 3111 6.663523 TGTCTAGGACACATCTAGATTTGACA 59.336 38.462 22.67 16.15 43.25 3.58
2718 3112 7.067615 TCTGTCTAGGACACATCTAGATTTGAC 59.932 40.741 22.67 16.85 43.25 3.18
2719 3113 7.067615 GTCTGTCTAGGACACATCTAGATTTGA 59.932 40.741 22.67 3.37 43.25 2.69
2720 3114 7.199766 GTCTGTCTAGGACACATCTAGATTTG 58.800 42.308 15.80 15.80 43.25 2.32
2721 3115 6.322712 GGTCTGTCTAGGACACATCTAGATTT 59.677 42.308 1.33 0.00 43.25 2.17
2722 3116 5.830991 GGTCTGTCTAGGACACATCTAGATT 59.169 44.000 1.33 0.00 43.25 2.40
2723 3117 5.381757 GGTCTGTCTAGGACACATCTAGAT 58.618 45.833 0.00 0.00 43.25 1.98
2724 3118 4.385421 GGGTCTGTCTAGGACACATCTAGA 60.385 50.000 0.00 0.00 37.67 2.43
2725 3119 3.886505 GGGTCTGTCTAGGACACATCTAG 59.113 52.174 0.00 0.00 37.67 2.43
2726 3120 3.528078 AGGGTCTGTCTAGGACACATCTA 59.472 47.826 3.18 0.00 39.36 1.98
2727 3121 2.313342 AGGGTCTGTCTAGGACACATCT 59.687 50.000 3.18 0.00 39.36 2.90
2728 3122 2.741145 AGGGTCTGTCTAGGACACATC 58.259 52.381 3.18 0.00 39.36 3.06
2729 3123 2.930109 AGGGTCTGTCTAGGACACAT 57.070 50.000 3.18 0.00 39.36 3.21
2730 3124 4.332683 AATAGGGTCTGTCTAGGACACA 57.667 45.455 3.18 0.00 39.36 3.72
2731 3125 5.678955 AAAATAGGGTCTGTCTAGGACAC 57.321 43.478 0.00 0.00 37.67 3.67
2756 3150 8.997734 AGGACTCCATAAAAATCTAGACTCAAT 58.002 33.333 0.00 0.00 0.00 2.57
2757 3151 8.380742 AGGACTCCATAAAAATCTAGACTCAA 57.619 34.615 0.00 0.00 0.00 3.02
2758 3152 7.979786 AGGACTCCATAAAAATCTAGACTCA 57.020 36.000 0.00 0.00 0.00 3.41
2759 3153 9.103861 CAAAGGACTCCATAAAAATCTAGACTC 57.896 37.037 0.00 0.00 0.00 3.36
2760 3154 8.826765 TCAAAGGACTCCATAAAAATCTAGACT 58.173 33.333 0.00 0.00 0.00 3.24
2761 3155 9.620259 ATCAAAGGACTCCATAAAAATCTAGAC 57.380 33.333 0.00 0.00 0.00 2.59
2822 3216 9.635404 TTTAAGGTCTCTGTTTTCCTATGAAAA 57.365 29.630 2.19 2.19 45.72 2.29
2823 3217 9.635404 TTTTAAGGTCTCTGTTTTCCTATGAAA 57.365 29.630 0.00 0.00 38.69 2.69
2824 3218 9.284968 CTTTTAAGGTCTCTGTTTTCCTATGAA 57.715 33.333 0.00 0.00 0.00 2.57
2825 3219 8.656806 TCTTTTAAGGTCTCTGTTTTCCTATGA 58.343 33.333 0.00 0.00 0.00 2.15
2826 3220 8.848474 TCTTTTAAGGTCTCTGTTTTCCTATG 57.152 34.615 0.00 0.00 0.00 2.23
2829 3223 9.286170 GTAATCTTTTAAGGTCTCTGTTTTCCT 57.714 33.333 0.00 0.00 0.00 3.36
2830 3224 9.063615 TGTAATCTTTTAAGGTCTCTGTTTTCC 57.936 33.333 0.00 0.00 0.00 3.13
2831 3225 9.880064 GTGTAATCTTTTAAGGTCTCTGTTTTC 57.120 33.333 0.00 0.00 0.00 2.29
2832 3226 8.557029 CGTGTAATCTTTTAAGGTCTCTGTTTT 58.443 33.333 0.00 0.00 0.00 2.43
2833 3227 7.929785 TCGTGTAATCTTTTAAGGTCTCTGTTT 59.070 33.333 0.00 0.00 0.00 2.83
2834 3228 7.439381 TCGTGTAATCTTTTAAGGTCTCTGTT 58.561 34.615 0.00 0.00 0.00 3.16
2835 3229 6.989659 TCGTGTAATCTTTTAAGGTCTCTGT 58.010 36.000 0.00 0.00 0.00 3.41
2836 3230 7.884816 TTCGTGTAATCTTTTAAGGTCTCTG 57.115 36.000 0.00 0.00 0.00 3.35
2837 3231 9.503399 AAATTCGTGTAATCTTTTAAGGTCTCT 57.497 29.630 0.00 0.00 0.00 3.10
2874 3268 9.515020 CAATGTGTTGATTGTAAGTGTACTTTT 57.485 29.630 2.20 0.00 37.53 2.27
2875 3269 7.647715 GCAATGTGTTGATTGTAAGTGTACTTT 59.352 33.333 2.20 0.00 37.53 2.66
2876 3270 7.138736 GCAATGTGTTGATTGTAAGTGTACTT 58.861 34.615 2.51 2.51 37.53 2.24
2877 3271 6.262049 TGCAATGTGTTGATTGTAAGTGTACT 59.738 34.615 0.00 0.00 37.53 2.73
2878 3272 6.434596 TGCAATGTGTTGATTGTAAGTGTAC 58.565 36.000 0.00 0.00 37.53 2.90
2879 3273 6.625873 TGCAATGTGTTGATTGTAAGTGTA 57.374 33.333 0.00 0.00 37.53 2.90
2880 3274 5.512753 TGCAATGTGTTGATTGTAAGTGT 57.487 34.783 0.00 0.00 37.53 3.55
2881 3275 7.169476 TGAAATGCAATGTGTTGATTGTAAGTG 59.831 33.333 0.00 0.00 37.53 3.16
2882 3276 7.208777 TGAAATGCAATGTGTTGATTGTAAGT 58.791 30.769 0.00 0.00 37.53 2.24
2883 3277 7.640616 TGAAATGCAATGTGTTGATTGTAAG 57.359 32.000 0.00 0.00 37.53 2.34
2884 3278 8.019769 CATGAAATGCAATGTGTTGATTGTAA 57.980 30.769 0.00 0.00 37.62 2.41
2885 3279 7.583860 CATGAAATGCAATGTGTTGATTGTA 57.416 32.000 0.00 0.00 37.62 2.41
2886 3280 6.474819 CATGAAATGCAATGTGTTGATTGT 57.525 33.333 0.00 0.00 37.62 2.71
2943 3337 8.967918 GGCTACCCTTCAATTAAAAAGTTAGAT 58.032 33.333 0.00 0.00 0.00 1.98
2944 3338 8.168058 AGGCTACCCTTCAATTAAAAAGTTAGA 58.832 33.333 0.00 0.00 38.74 2.10
2945 3339 8.349568 AGGCTACCCTTCAATTAAAAAGTTAG 57.650 34.615 0.00 0.00 38.74 2.34
2946 3340 8.168058 AGAGGCTACCCTTCAATTAAAAAGTTA 58.832 33.333 0.00 0.00 43.12 2.24
2947 3341 7.010771 AGAGGCTACCCTTCAATTAAAAAGTT 58.989 34.615 0.00 0.00 43.12 2.66
2948 3342 6.552932 AGAGGCTACCCTTCAATTAAAAAGT 58.447 36.000 0.00 0.00 43.12 2.66
2949 3343 8.575649 TTAGAGGCTACCCTTCAATTAAAAAG 57.424 34.615 0.00 0.00 43.12 2.27
2950 3344 9.541884 AATTAGAGGCTACCCTTCAATTAAAAA 57.458 29.630 0.00 0.00 43.12 1.94
2951 3345 9.541884 AAATTAGAGGCTACCCTTCAATTAAAA 57.458 29.630 0.00 0.00 43.12 1.52
2952 3346 9.185680 GAAATTAGAGGCTACCCTTCAATTAAA 57.814 33.333 0.00 0.00 43.12 1.52
2953 3347 8.557450 AGAAATTAGAGGCTACCCTTCAATTAA 58.443 33.333 0.00 0.00 43.12 1.40
2954 3348 8.102484 AGAAATTAGAGGCTACCCTTCAATTA 57.898 34.615 0.00 0.00 43.12 1.40
2955 3349 6.974795 AGAAATTAGAGGCTACCCTTCAATT 58.025 36.000 0.00 0.00 43.12 2.32
2956 3350 6.582929 AGAAATTAGAGGCTACCCTTCAAT 57.417 37.500 0.00 0.00 43.12 2.57
2957 3351 6.126854 GGTAGAAATTAGAGGCTACCCTTCAA 60.127 42.308 0.00 0.00 44.45 2.69
2958 3352 5.365895 GGTAGAAATTAGAGGCTACCCTTCA 59.634 44.000 0.00 0.00 44.45 3.02
2959 3353 5.856156 GGTAGAAATTAGAGGCTACCCTTC 58.144 45.833 0.00 0.00 44.45 3.46
2960 3354 5.890752 GGTAGAAATTAGAGGCTACCCTT 57.109 43.478 0.00 0.00 44.45 3.95
2966 3360 7.717436 GCAGATTAAAGGTAGAAATTAGAGGCT 59.283 37.037 0.00 0.00 0.00 4.58
2967 3361 7.499232 TGCAGATTAAAGGTAGAAATTAGAGGC 59.501 37.037 0.00 0.00 0.00 4.70
2968 3362 8.964476 TGCAGATTAAAGGTAGAAATTAGAGG 57.036 34.615 0.00 0.00 0.00 3.69
2970 3364 9.261180 CGATGCAGATTAAAGGTAGAAATTAGA 57.739 33.333 0.00 0.00 0.00 2.10
2971 3365 9.261180 TCGATGCAGATTAAAGGTAGAAATTAG 57.739 33.333 0.00 0.00 0.00 1.73
2972 3366 9.607988 TTCGATGCAGATTAAAGGTAGAAATTA 57.392 29.630 0.00 0.00 0.00 1.40
2973 3367 8.506168 TTCGATGCAGATTAAAGGTAGAAATT 57.494 30.769 0.00 0.00 0.00 1.82
2974 3368 8.506168 TTTCGATGCAGATTAAAGGTAGAAAT 57.494 30.769 0.00 0.00 0.00 2.17
2975 3369 7.915293 TTTCGATGCAGATTAAAGGTAGAAA 57.085 32.000 0.00 0.00 0.00 2.52
2976 3370 9.778741 ATATTTCGATGCAGATTAAAGGTAGAA 57.221 29.630 0.00 0.00 0.00 2.10
2977 3371 9.208022 CATATTTCGATGCAGATTAAAGGTAGA 57.792 33.333 0.00 0.00 0.00 2.59
2978 3372 8.993121 ACATATTTCGATGCAGATTAAAGGTAG 58.007 33.333 0.00 0.00 0.00 3.18
2979 3373 8.902540 ACATATTTCGATGCAGATTAAAGGTA 57.097 30.769 0.00 0.00 0.00 3.08
2980 3374 7.807977 ACATATTTCGATGCAGATTAAAGGT 57.192 32.000 0.00 0.00 0.00 3.50
2987 3381 9.722056 GAAAAGTTTACATATTTCGATGCAGAT 57.278 29.630 0.00 0.00 0.00 2.90
2988 3382 8.946085 AGAAAAGTTTACATATTTCGATGCAGA 58.054 29.630 0.00 0.00 36.99 4.26
2995 3389 9.704098 GCTCCTTAGAAAAGTTTACATATTTCG 57.296 33.333 0.00 0.00 36.99 3.46
3000 3394 8.483758 CCCTAGCTCCTTAGAAAAGTTTACATA 58.516 37.037 0.00 0.00 0.00 2.29
3001 3395 7.037514 ACCCTAGCTCCTTAGAAAAGTTTACAT 60.038 37.037 0.00 0.00 0.00 2.29
3002 3396 6.271624 ACCCTAGCTCCTTAGAAAAGTTTACA 59.728 38.462 0.00 0.00 0.00 2.41
3003 3397 6.594547 CACCCTAGCTCCTTAGAAAAGTTTAC 59.405 42.308 0.00 0.00 0.00 2.01
3004 3398 6.271624 ACACCCTAGCTCCTTAGAAAAGTTTA 59.728 38.462 0.00 0.00 0.00 2.01
3005 3399 5.073280 ACACCCTAGCTCCTTAGAAAAGTTT 59.927 40.000 0.00 0.00 0.00 2.66
3006 3400 4.597940 ACACCCTAGCTCCTTAGAAAAGTT 59.402 41.667 0.00 0.00 0.00 2.66
3007 3401 4.168883 ACACCCTAGCTCCTTAGAAAAGT 58.831 43.478 0.00 0.00 0.00 2.66
3008 3402 4.828072 ACACCCTAGCTCCTTAGAAAAG 57.172 45.455 0.00 0.00 0.00 2.27
3009 3403 4.161754 GCTACACCCTAGCTCCTTAGAAAA 59.838 45.833 0.00 0.00 37.56 2.29
3010 3404 3.705072 GCTACACCCTAGCTCCTTAGAAA 59.295 47.826 0.00 0.00 37.56 2.52
3011 3405 3.297736 GCTACACCCTAGCTCCTTAGAA 58.702 50.000 0.00 0.00 37.56 2.10
3012 3406 2.946785 GCTACACCCTAGCTCCTTAGA 58.053 52.381 0.00 0.00 37.56 2.10
3020 3414 6.598064 TCAAAAATCTTAAGCTACACCCTAGC 59.402 38.462 0.00 0.00 40.67 3.42
3021 3415 7.201530 CGTCAAAAATCTTAAGCTACACCCTAG 60.202 40.741 0.00 0.00 0.00 3.02
3022 3416 6.592607 CGTCAAAAATCTTAAGCTACACCCTA 59.407 38.462 0.00 0.00 0.00 3.53
3023 3417 5.411669 CGTCAAAAATCTTAAGCTACACCCT 59.588 40.000 0.00 0.00 0.00 4.34
3024 3418 5.628134 CGTCAAAAATCTTAAGCTACACCC 58.372 41.667 0.00 0.00 0.00 4.61
3025 3419 5.086727 GCGTCAAAAATCTTAAGCTACACC 58.913 41.667 0.00 0.00 0.00 4.16
3026 3420 5.086727 GGCGTCAAAAATCTTAAGCTACAC 58.913 41.667 0.00 0.00 0.00 2.90
3027 3421 5.001232 AGGCGTCAAAAATCTTAAGCTACA 58.999 37.500 0.00 0.00 0.00 2.74
3028 3422 5.121768 TGAGGCGTCAAAAATCTTAAGCTAC 59.878 40.000 6.64 0.00 0.00 3.58
3029 3423 5.242434 TGAGGCGTCAAAAATCTTAAGCTA 58.758 37.500 6.64 0.00 0.00 3.32
3030 3424 4.072131 TGAGGCGTCAAAAATCTTAAGCT 58.928 39.130 6.64 0.00 0.00 3.74
3031 3425 4.419522 TGAGGCGTCAAAAATCTTAAGC 57.580 40.909 6.64 0.00 0.00 3.09
3032 3426 6.611381 TGAATGAGGCGTCAAAAATCTTAAG 58.389 36.000 13.87 0.00 35.88 1.85
3033 3427 6.349280 CCTGAATGAGGCGTCAAAAATCTTAA 60.349 38.462 13.87 0.00 35.88 1.85
3034 3428 5.123820 CCTGAATGAGGCGTCAAAAATCTTA 59.876 40.000 13.87 0.00 35.88 2.10
3035 3429 4.082571 CCTGAATGAGGCGTCAAAAATCTT 60.083 41.667 13.87 1.61 35.88 2.40
3036 3430 3.441572 CCTGAATGAGGCGTCAAAAATCT 59.558 43.478 13.87 0.00 35.88 2.40
3037 3431 3.762779 CCTGAATGAGGCGTCAAAAATC 58.237 45.455 13.87 9.92 35.88 2.17
3038 3432 3.855689 CCTGAATGAGGCGTCAAAAAT 57.144 42.857 13.87 0.21 35.88 1.82
3049 3443 4.751767 AGAAGAAGCCTACCTGAATGAG 57.248 45.455 0.00 0.00 0.00 2.90
3050 3444 6.814954 AATAGAAGAAGCCTACCTGAATGA 57.185 37.500 0.00 0.00 0.00 2.57
3051 3445 8.964476 TTTAATAGAAGAAGCCTACCTGAATG 57.036 34.615 0.00 0.00 0.00 2.67
3074 3468 9.733556 TTGTACACTACCATCAGAACATATTTT 57.266 29.630 0.00 0.00 0.00 1.82
3075 3469 9.733556 TTTGTACACTACCATCAGAACATATTT 57.266 29.630 0.00 0.00 0.00 1.40
3076 3470 9.383519 CTTTGTACACTACCATCAGAACATATT 57.616 33.333 0.00 0.00 0.00 1.28
3077 3471 8.758829 TCTTTGTACACTACCATCAGAACATAT 58.241 33.333 0.00 0.00 0.00 1.78
3078 3472 8.129496 TCTTTGTACACTACCATCAGAACATA 57.871 34.615 0.00 0.00 0.00 2.29
3079 3473 7.004555 TCTTTGTACACTACCATCAGAACAT 57.995 36.000 0.00 0.00 0.00 2.71
3080 3474 6.413783 TCTTTGTACACTACCATCAGAACA 57.586 37.500 0.00 0.00 0.00 3.18
3081 3475 7.324178 AGATCTTTGTACACTACCATCAGAAC 58.676 38.462 0.00 0.00 0.00 3.01
3082 3476 7.397476 AGAGATCTTTGTACACTACCATCAGAA 59.603 37.037 0.00 0.00 0.00 3.02
3083 3477 6.892456 AGAGATCTTTGTACACTACCATCAGA 59.108 38.462 0.00 0.00 0.00 3.27
3084 3478 7.106439 AGAGATCTTTGTACACTACCATCAG 57.894 40.000 0.00 0.00 0.00 2.90
3085 3479 7.482169 AAGAGATCTTTGTACACTACCATCA 57.518 36.000 0.00 0.00 30.82 3.07
3086 3480 8.779354 AAAAGAGATCTTTGTACACTACCATC 57.221 34.615 8.53 0.00 44.69 3.51
3087 3481 8.598041 AGAAAAGAGATCTTTGTACACTACCAT 58.402 33.333 8.53 0.00 44.69 3.55
3088 3482 7.963532 AGAAAAGAGATCTTTGTACACTACCA 58.036 34.615 8.53 0.00 44.69 3.25
3089 3483 8.834749 AAGAAAAGAGATCTTTGTACACTACC 57.165 34.615 8.53 0.00 44.69 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.