Multiple sequence alignment - TraesCS2D01G228500
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS2D01G228500
chr2D
100.000
1619
0
0
1568
3186
197837504
197839122
0.000000e+00
2990.0
1
TraesCS2D01G228500
chr2D
100.000
1159
0
0
1
1159
197835937
197837095
0.000000e+00
2141.0
2
TraesCS2D01G228500
chr2D
95.833
144
5
1
1821
1964
628827165
628827023
6.870000e-57
231.0
3
TraesCS2D01G228500
chr2A
93.123
1425
73
13
1594
3006
214237328
214238739
0.000000e+00
2065.0
4
TraesCS2D01G228500
chr2A
93.250
637
19
6
537
1159
214236606
214237232
0.000000e+00
917.0
5
TraesCS2D01G228500
chr2A
90.730
356
23
4
2
351
214235850
214236201
1.730000e-127
466.0
6
TraesCS2D01G228500
chr2A
89.266
177
17
1
3007
3183
214239638
214239812
1.490000e-53
220.0
7
TraesCS2D01G228500
chr2A
93.651
63
3
1
452
513
214236290
214236352
3.380000e-15
93.5
8
TraesCS2D01G228500
chr2B
91.056
1241
60
23
1568
2793
254621845
254623049
0.000000e+00
1629.0
9
TraesCS2D01G228500
chr2B
89.839
620
24
12
452
1048
254620894
254621497
0.000000e+00
760.0
10
TraesCS2D01G228500
chr2B
89.831
354
13
8
2
355
254620201
254620531
1.760000e-117
433.0
11
TraesCS2D01G228500
chr2B
80.822
365
34
17
2824
3158
254623044
254623402
1.470000e-63
254.0
12
TraesCS2D01G228500
chr2B
98.000
100
2
0
1060
1159
254621667
254621766
1.170000e-39
174.0
13
TraesCS2D01G228500
chr2B
92.593
54
0
1
374
423
254620530
254620583
1.230000e-09
75.0
14
TraesCS2D01G228500
chr3D
95.031
161
8
0
1821
1981
93201203
93201363
1.470000e-63
254.0
15
TraesCS2D01G228500
chr7D
94.737
133
7
0
1842
1974
104961001
104960869
1.160000e-49
207.0
16
TraesCS2D01G228500
chr7D
93.939
66
4
0
1842
1907
104961078
104961013
2.020000e-17
100.0
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS2D01G228500
chr2D
197835937
197839122
3185
False
2565.500000
2990
100.000000
1
3186
2
chr2D.!!$F1
3185
1
TraesCS2D01G228500
chr2A
214235850
214239812
3962
False
752.300000
2065
92.004000
2
3183
5
chr2A.!!$F1
3181
2
TraesCS2D01G228500
chr2B
254620201
254623402
3201
False
554.166667
1629
90.356833
2
3158
6
chr2B.!!$F1
3156
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
181
198
0.034059
AGAAAGGGTGACGTGAGCAG
59.966
55.000
6.53
0.00
0.0
4.24
F
446
470
0.396556
ATGGTGTAAAATCCGGGCCC
60.397
55.000
13.57
13.57
0.0
5.80
F
447
471
1.000646
GGTGTAAAATCCGGGCCCA
60.001
57.895
24.92
2.47
0.0
5.36
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1587
2316
0.179189
CGATTGGTTTGGCTTCGAGC
60.179
55.0
0.0
0.0
41.46
5.03
R
1592
2321
0.596082
CCGTTCGATTGGTTTGGCTT
59.404
50.0
0.0
0.0
0.00
4.35
R
2197
2929
1.604604
TTTGCGACCCAAAGGAAGAG
58.395
50.0
0.0
0.0
38.46
2.85
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
57
58
1.623973
GGCGTAACTCTCGTGTTGGC
61.624
60.000
0.00
0.00
33.22
4.52
58
59
0.666577
GCGTAACTCTCGTGTTGGCT
60.667
55.000
0.00
0.00
32.14
4.75
59
60
1.779569
CGTAACTCTCGTGTTGGCTT
58.220
50.000
0.00
0.00
0.00
4.35
60
61
1.455786
CGTAACTCTCGTGTTGGCTTG
59.544
52.381
0.00
0.00
0.00
4.01
101
103
1.716826
GGTGAACCCGCACGTGAAAA
61.717
55.000
22.23
0.00
39.66
2.29
106
108
0.179067
ACCCGCACGTGAAAAGAGAA
60.179
50.000
22.23
0.00
0.00
2.87
107
109
0.512952
CCCGCACGTGAAAAGAGAAG
59.487
55.000
22.23
0.00
0.00
2.85
108
110
0.110644
CCGCACGTGAAAAGAGAAGC
60.111
55.000
22.23
0.00
0.00
3.86
109
111
0.581529
CGCACGTGAAAAGAGAAGCA
59.418
50.000
22.23
0.00
0.00
3.91
110
112
1.657538
CGCACGTGAAAAGAGAAGCAC
60.658
52.381
22.23
0.00
0.00
4.40
115
117
3.511856
GTGAAAAGAGAAGCACGAGTG
57.488
47.619
0.00
0.00
0.00
3.51
181
198
0.034059
AGAAAGGGTGACGTGAGCAG
59.966
55.000
6.53
0.00
0.00
4.24
188
205
2.881352
GACGTGAGCAGCTACGCC
60.881
66.667
18.55
8.83
43.63
5.68
213
230
4.680237
CACTCTGCGGCCGTCCAA
62.680
66.667
28.70
9.41
0.00
3.53
229
246
1.226101
CAACGCGGCACATAAGCTG
60.226
57.895
12.47
0.00
43.77
4.24
234
251
2.438434
GGCACATAAGCTGCCGGT
60.438
61.111
1.90
0.00
44.78
5.28
294
311
0.591659
TCGACCACTCGAACTCACAG
59.408
55.000
0.00
0.00
46.04
3.66
339
356
1.067084
CATCTGCATCGTCTCGGCT
59.933
57.895
0.00
0.00
0.00
5.52
425
449
4.410400
GTGGACCCGGCCCTCTTG
62.410
72.222
11.68
0.00
0.00
3.02
428
452
3.090532
GACCCGGCCCTCTTGGAT
61.091
66.667
0.00
0.00
35.39
3.41
429
453
3.406595
GACCCGGCCCTCTTGGATG
62.407
68.421
0.00
0.00
35.39
3.51
431
455
3.411517
CCGGCCCTCTTGGATGGT
61.412
66.667
0.00
0.00
35.39
3.55
432
456
2.124570
CGGCCCTCTTGGATGGTG
60.125
66.667
0.00
0.00
35.39
4.17
433
457
2.971598
CGGCCCTCTTGGATGGTGT
61.972
63.158
0.00
0.00
35.39
4.16
434
458
1.622607
CGGCCCTCTTGGATGGTGTA
61.623
60.000
0.00
0.00
35.39
2.90
435
459
0.623723
GGCCCTCTTGGATGGTGTAA
59.376
55.000
0.00
0.00
35.39
2.41
436
460
1.005450
GGCCCTCTTGGATGGTGTAAA
59.995
52.381
0.00
0.00
35.39
2.01
437
461
2.556559
GGCCCTCTTGGATGGTGTAAAA
60.557
50.000
0.00
0.00
35.39
1.52
440
464
3.954258
CCCTCTTGGATGGTGTAAAATCC
59.046
47.826
0.00
0.00
42.40
3.01
441
465
3.627577
CCTCTTGGATGGTGTAAAATCCG
59.372
47.826
0.00
0.00
44.59
4.18
443
467
2.428544
TGGATGGTGTAAAATCCGGG
57.571
50.000
0.00
0.00
44.59
5.73
444
468
1.029681
GGATGGTGTAAAATCCGGGC
58.970
55.000
0.00
0.00
33.42
6.13
445
469
1.029681
GATGGTGTAAAATCCGGGCC
58.970
55.000
0.00
0.00
0.00
5.80
446
470
0.396556
ATGGTGTAAAATCCGGGCCC
60.397
55.000
13.57
13.57
0.00
5.80
447
471
1.000646
GGTGTAAAATCCGGGCCCA
60.001
57.895
24.92
2.47
0.00
5.36
449
473
1.377463
TGTAAAATCCGGGCCCACG
60.377
57.895
24.92
11.57
0.00
4.94
602
1152
1.144936
CCTCGGTCAAGATGGGCTC
59.855
63.158
0.00
0.00
0.00
4.70
605
1155
1.967066
CTCGGTCAAGATGGGCTCTAT
59.033
52.381
0.00
0.00
32.41
1.98
611
1161
3.386078
GTCAAGATGGGCTCTATCACAGA
59.614
47.826
0.00
0.00
32.41
3.41
613
1163
3.037851
AGATGGGCTCTATCACAGACA
57.962
47.619
0.00
0.00
30.26
3.41
794
1359
2.337532
GCAACACAGGCAGGCAAG
59.662
61.111
0.00
0.00
0.00
4.01
823
1388
2.860136
CACTCGTCTCCATACGTACGTA
59.140
50.000
28.62
28.62
43.31
3.57
824
1389
2.860735
ACTCGTCTCCATACGTACGTAC
59.139
50.000
28.99
17.22
43.31
3.67
971
1541
6.296026
ACAGCCACAAATTGACCGTATATAT
58.704
36.000
0.00
0.00
0.00
0.86
1608
2337
1.804151
CTCGAAGCCAAACCAATCGAA
59.196
47.619
0.00
0.00
41.39
3.71
1613
2342
0.594110
GCCAAACCAATCGAACGGAA
59.406
50.000
10.26
0.00
0.00
4.30
1618
2347
0.321298
ACCAATCGAACGGAACCAGG
60.321
55.000
10.26
0.00
0.00
4.45
2153
2884
0.838554
TTCCCCGGATGACCTCAACA
60.839
55.000
0.73
0.00
0.00
3.33
2510
3248
6.127810
TGAGTATGCTTTCAAATCATGCTC
57.872
37.500
19.49
19.49
44.61
4.26
2512
3250
2.925578
TGCTTTCAAATCATGCTCGG
57.074
45.000
0.00
0.00
0.00
4.63
2523
3266
7.666623
TCAAATCATGCTCGGAGTATATGTTA
58.333
34.615
8.31
0.00
0.00
2.41
2641
3390
8.060090
CGTTTCGTAATTTCAATATGGACTACC
58.940
37.037
0.00
0.00
0.00
3.18
2650
3399
6.961360
TCAATATGGACTACCTACAGACTG
57.039
41.667
0.00
0.00
37.04
3.51
2658
3407
5.502153
ACTACCTACAGACTGAAATAGCG
57.498
43.478
10.08
0.00
0.00
4.26
2746
3499
1.384191
GGATTGGTTGGGAGGCAGT
59.616
57.895
0.00
0.00
0.00
4.40
2804
3557
2.489722
GTTGGGAGGCAAGAGATTTGAC
59.510
50.000
0.00
0.00
0.00
3.18
2833
3586
3.225177
AGAGAATCATGGAGGCCAATG
57.775
47.619
5.01
6.10
36.95
2.82
2868
3621
5.376625
GTCTTCCCCATGTTAATGCAGATA
58.623
41.667
0.00
0.00
31.93
1.98
2876
3629
6.662234
CCCATGTTAATGCAGATAGGATGAAT
59.338
38.462
0.00
0.00
31.93
2.57
2901
3654
1.679139
TCTCAAACTGCCACCACTTG
58.321
50.000
0.00
0.00
0.00
3.16
2911
3664
4.225042
ACTGCCACCACTTGTATCATCTAA
59.775
41.667
0.00
0.00
0.00
2.10
2912
3665
4.769688
TGCCACCACTTGTATCATCTAAG
58.230
43.478
0.00
0.00
0.00
2.18
2913
3666
4.225042
TGCCACCACTTGTATCATCTAAGT
59.775
41.667
0.00
0.00
35.18
2.24
2914
3667
5.423931
TGCCACCACTTGTATCATCTAAGTA
59.576
40.000
0.00
0.00
33.63
2.24
2915
3668
5.753921
GCCACCACTTGTATCATCTAAGTAC
59.246
44.000
0.00
0.00
33.63
2.73
2918
3671
7.277981
CCACCACTTGTATCATCTAAGTACAAC
59.722
40.741
0.00
0.00
35.27
3.32
3036
4687
1.323235
GCAACAAGGCAAACAACGTTC
59.677
47.619
0.00
0.00
0.00
3.95
3046
4697
4.041049
GCAAACAACGTTCATCAACATCA
58.959
39.130
0.00
0.00
32.14
3.07
3047
4698
4.681025
GCAAACAACGTTCATCAACATCAT
59.319
37.500
0.00
0.00
32.14
2.45
3168
4819
3.889134
CTTGGCCTGCTGTCGCTCA
62.889
63.158
3.32
0.00
36.97
4.26
3183
4834
1.577328
GCTCACGATGGGTGGTGTTG
61.577
60.000
0.00
0.00
46.96
3.33
3184
4835
1.577328
CTCACGATGGGTGGTGTTGC
61.577
60.000
0.00
0.00
46.96
4.17
3185
4836
2.282180
ACGATGGGTGGTGTTGCC
60.282
61.111
0.00
0.00
37.90
4.52
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
57
58
1.468520
CAATTCGTACCCAGCACCAAG
59.531
52.381
0.00
0.00
0.00
3.61
58
59
1.072489
TCAATTCGTACCCAGCACCAA
59.928
47.619
0.00
0.00
0.00
3.67
59
60
0.687920
TCAATTCGTACCCAGCACCA
59.312
50.000
0.00
0.00
0.00
4.17
60
61
1.816074
TTCAATTCGTACCCAGCACC
58.184
50.000
0.00
0.00
0.00
5.01
213
230
3.499737
GCAGCTTATGTGCCGCGT
61.500
61.111
4.92
0.00
34.67
6.01
223
240
4.028490
CCCACCACCGGCAGCTTA
62.028
66.667
0.00
0.00
0.00
3.09
372
389
0.030773
TTATCTAGGCGACTGCTGCG
59.969
55.000
0.00
0.00
43.88
5.18
423
447
2.729194
CCCGGATTTTACACCATCCAA
58.271
47.619
0.73
0.00
39.29
3.53
424
448
1.683629
GCCCGGATTTTACACCATCCA
60.684
52.381
0.73
0.00
39.29
3.41
425
449
1.029681
GCCCGGATTTTACACCATCC
58.970
55.000
0.73
0.00
36.35
3.51
426
450
1.029681
GGCCCGGATTTTACACCATC
58.970
55.000
0.73
0.00
0.00
3.51
427
451
0.396556
GGGCCCGGATTTTACACCAT
60.397
55.000
5.69
0.00
0.00
3.55
428
452
1.000646
GGGCCCGGATTTTACACCA
60.001
57.895
5.69
0.00
0.00
4.17
429
453
1.000646
TGGGCCCGGATTTTACACC
60.001
57.895
19.37
0.00
0.00
4.16
431
455
1.377463
CGTGGGCCCGGATTTTACA
60.377
57.895
19.37
0.00
0.00
2.41
432
456
2.767445
GCGTGGGCCCGGATTTTAC
61.767
63.158
19.37
6.70
0.00
2.01
433
457
2.438795
GCGTGGGCCCGGATTTTA
60.439
61.111
19.37
0.00
0.00
1.52
434
458
3.955543
ATGCGTGGGCCCGGATTTT
62.956
57.895
19.37
0.00
35.19
1.82
435
459
4.440829
ATGCGTGGGCCCGGATTT
62.441
61.111
19.37
0.00
35.19
2.17
436
460
4.875713
GATGCGTGGGCCCGGATT
62.876
66.667
19.37
0.00
39.08
3.01
440
464
3.883744
GATAGGATGCGTGGGCCCG
62.884
68.421
19.37
7.25
38.85
6.13
441
465
2.032681
GATAGGATGCGTGGGCCC
59.967
66.667
17.59
17.59
38.85
5.80
443
467
2.357517
CGGATAGGATGCGTGGGC
60.358
66.667
0.00
0.00
39.38
5.36
444
468
0.321671
ATTCGGATAGGATGCGTGGG
59.678
55.000
0.30
0.00
44.82
4.61
445
469
3.190079
CATATTCGGATAGGATGCGTGG
58.810
50.000
0.00
0.00
44.82
4.94
446
470
2.604914
GCATATTCGGATAGGATGCGTG
59.395
50.000
0.00
0.00
44.82
5.34
447
471
2.497675
AGCATATTCGGATAGGATGCGT
59.502
45.455
0.00
0.00
44.82
5.24
449
473
5.468072
CCATTAGCATATTCGGATAGGATGC
59.532
44.000
0.00
0.38
0.00
3.91
523
840
0.889994
TGGTGTTGCATGGAAGCATC
59.110
50.000
0.00
3.05
45.19
3.91
589
1139
3.386078
TCTGTGATAGAGCCCATCTTGAC
59.614
47.826
0.00
0.00
39.64
3.18
590
1140
3.386078
GTCTGTGATAGAGCCCATCTTGA
59.614
47.826
0.00
0.00
39.64
3.02
602
1152
4.377431
GCGTTGGTTTCTTGTCTGTGATAG
60.377
45.833
0.00
0.00
0.00
2.08
605
1155
1.668751
GCGTTGGTTTCTTGTCTGTGA
59.331
47.619
0.00
0.00
0.00
3.58
611
1161
1.063488
GCACGCGTTGGTTTCTTGT
59.937
52.632
10.22
0.00
0.00
3.16
613
1163
2.103410
AAGCACGCGTTGGTTTCTT
58.897
47.368
10.22
3.41
43.64
2.52
794
1359
1.481871
TGGAGACGAGTGGATAACCC
58.518
55.000
0.00
0.00
34.81
4.11
823
1388
0.388907
AACGCAGCCATACGTAACGT
60.389
50.000
0.00
0.00
42.68
3.99
824
1389
0.717224
AAACGCAGCCATACGTAACG
59.283
50.000
0.00
0.00
42.68
3.18
825
1390
1.461897
ACAAACGCAGCCATACGTAAC
59.538
47.619
0.00
0.00
42.68
2.50
826
1391
1.798283
ACAAACGCAGCCATACGTAA
58.202
45.000
0.00
0.00
42.68
3.18
838
1403
3.857923
TTAGACACGGTTTACAAACGC
57.142
42.857
0.00
0.00
39.77
4.84
971
1541
7.673180
TCTTTTTGTATTTTCTCTCCTCCGTA
58.327
34.615
0.00
0.00
0.00
4.02
1582
2311
0.889186
GGTTTGGCTTCGAGCTTGGA
60.889
55.000
0.00
0.00
41.99
3.53
1584
2313
0.667993
TTGGTTTGGCTTCGAGCTTG
59.332
50.000
0.00
0.00
41.99
4.01
1585
2314
1.541588
GATTGGTTTGGCTTCGAGCTT
59.458
47.619
6.78
0.00
41.99
3.74
1586
2315
1.168714
GATTGGTTTGGCTTCGAGCT
58.831
50.000
6.78
0.00
41.99
4.09
1587
2316
0.179189
CGATTGGTTTGGCTTCGAGC
60.179
55.000
0.00
0.00
41.46
5.03
1588
2317
1.438651
TCGATTGGTTTGGCTTCGAG
58.561
50.000
0.00
0.00
34.24
4.04
1589
2318
1.533731
GTTCGATTGGTTTGGCTTCGA
59.466
47.619
0.00
0.00
37.08
3.71
1590
2319
1.724654
CGTTCGATTGGTTTGGCTTCG
60.725
52.381
0.00
0.00
0.00
3.79
1591
2320
1.401018
CCGTTCGATTGGTTTGGCTTC
60.401
52.381
0.00
0.00
0.00
3.86
1592
2321
0.596082
CCGTTCGATTGGTTTGGCTT
59.404
50.000
0.00
0.00
0.00
4.35
2153
2884
4.740822
AGCAGCCCGGCCGATTTT
62.741
61.111
30.73
6.10
0.00
1.82
2186
2917
3.437931
CCAAAGGAAGAGAAAAGGGGGAA
60.438
47.826
0.00
0.00
0.00
3.97
2197
2929
1.604604
TTTGCGACCCAAAGGAAGAG
58.395
50.000
0.00
0.00
38.46
2.85
2243
2975
5.106791
CGCTTCTCATGAACTCATTGAAACT
60.107
40.000
0.00
0.00
33.61
2.66
2251
2983
3.942130
TTCTCGCTTCTCATGAACTCA
57.058
42.857
0.00
0.00
0.00
3.41
2333
3067
7.542890
ACTACACAATCAACAACAATTCAACA
58.457
30.769
0.00
0.00
0.00
3.33
2334
3068
7.985634
ACTACACAATCAACAACAATTCAAC
57.014
32.000
0.00
0.00
0.00
3.18
2335
3069
7.490725
CCAACTACACAATCAACAACAATTCAA
59.509
33.333
0.00
0.00
0.00
2.69
2336
3070
6.977502
CCAACTACACAATCAACAACAATTCA
59.022
34.615
0.00
0.00
0.00
2.57
2535
3278
2.962421
GGGACAGAGAAGATCGAGGAAT
59.038
50.000
0.00
0.00
0.00
3.01
2568
3311
1.419381
AATTTCCCCAACCAAACGCT
58.581
45.000
0.00
0.00
0.00
5.07
2641
3390
6.893958
ATTTGTCGCTATTTCAGTCTGTAG
57.106
37.500
0.00
0.00
0.00
2.74
2711
3464
7.745620
ACCAATCCGAATTATAAGATGTTCC
57.254
36.000
0.00
0.00
0.00
3.62
2804
3557
4.118410
CTCCATGATTCTCTTCCACTTCG
58.882
47.826
0.00
0.00
0.00
3.79
2811
3564
3.287867
TTGGCCTCCATGATTCTCTTC
57.712
47.619
3.32
0.00
31.53
2.87
2814
3567
2.883386
GACATTGGCCTCCATGATTCTC
59.117
50.000
14.80
1.52
31.53
2.87
2833
3586
1.292541
GGAAGACGAGGGTGTGGAC
59.707
63.158
0.00
0.00
0.00
4.02
2868
3621
7.178983
TGGCAGTTTGAGAATAAAATTCATCCT
59.821
33.333
2.74
0.00
0.00
3.24
2876
3629
4.892934
AGTGGTGGCAGTTTGAGAATAAAA
59.107
37.500
0.00
0.00
0.00
1.52
2880
3633
2.624838
CAAGTGGTGGCAGTTTGAGAAT
59.375
45.455
0.00
0.00
0.00
2.40
2901
3654
8.979574
GCCAACTATGTTGTACTTAGATGATAC
58.020
37.037
9.20
0.00
33.46
2.24
2911
3664
9.998106
CTTATATTAGGCCAACTATGTTGTACT
57.002
33.333
5.01
8.75
0.00
2.73
2912
3665
9.216117
CCTTATATTAGGCCAACTATGTTGTAC
57.784
37.037
5.01
0.00
0.00
2.90
2963
3716
0.255890
ATTGCCCGGTCAATGCTAGT
59.744
50.000
10.47
0.00
35.52
2.57
3012
4663
2.278854
GTTGTTTGCCTTGTTGCATGT
58.721
42.857
0.00
0.00
41.70
3.21
3036
4687
8.962111
CGTCCGATCTATTATATGATGTTGATG
58.038
37.037
0.00
0.00
0.00
3.07
3168
4819
2.282180
GGCAACACCACCCATCGT
60.282
61.111
0.00
0.00
38.86
3.73
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.