Multiple sequence alignment - TraesCS2D01G225200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G225200 chr2D 100.000 8864 0 0 1 8864 192746136 192754999 0.000000e+00 16369.0
1 TraesCS2D01G225200 chr2D 88.147 599 59 6 8276 8863 451872955 451873552 0.000000e+00 702.0
2 TraesCS2D01G225200 chr2D 96.667 180 6 0 6262 6441 560959478 560959657 5.200000e-77 300.0
3 TraesCS2D01G225200 chr2D 96.053 152 6 0 6597 6748 538062622 538062471 1.910000e-61 248.0
4 TraesCS2D01G225200 chr2D 81.340 209 20 10 2298 2497 648384189 648384387 1.540000e-32 152.0
5 TraesCS2D01G225200 chr2D 89.474 114 11 1 6488 6600 71386460 71386573 9.280000e-30 143.0
6 TraesCS2D01G225200 chr2D 89.474 114 11 1 6487 6599 325325513 325325400 9.280000e-30 143.0
7 TraesCS2D01G225200 chr2D 94.737 57 3 0 6433 6489 325325626 325325570 1.230000e-13 89.8
8 TraesCS2D01G225200 chr2A 94.877 3728 112 24 12 3700 205209934 205206247 0.000000e+00 5753.0
9 TraesCS2D01G225200 chr2A 92.174 1955 67 19 3691 5597 205205183 205203267 0.000000e+00 2684.0
10 TraesCS2D01G225200 chr2A 93.894 1523 42 15 6741 8238 205202103 205200607 0.000000e+00 2250.0
11 TraesCS2D01G225200 chr2A 98.188 552 9 1 5590 6140 205202794 205202243 0.000000e+00 963.0
12 TraesCS2D01G225200 chr2A 84.437 604 73 15 8276 8863 761300097 761300695 7.720000e-160 575.0
13 TraesCS2D01G225200 chr2A 98.214 168 3 0 6269 6436 746757154 746756987 2.420000e-75 294.0
14 TraesCS2D01G225200 chr2A 95.055 182 8 1 6253 6434 744795919 744796099 1.460000e-72 285.0
15 TraesCS2D01G225200 chr2A 98.000 150 3 0 6597 6746 275929252 275929401 2.450000e-65 261.0
16 TraesCS2D01G225200 chr2A 95.395 152 7 0 6591 6742 688640984 688640833 8.890000e-60 243.0
17 TraesCS2D01G225200 chr2A 86.667 75 10 0 4175 4249 692065194 692065120 5.700000e-12 84.2
18 TraesCS2D01G225200 chr2B 95.584 3261 68 17 3031 6256 247923035 247919816 0.000000e+00 5155.0
19 TraesCS2D01G225200 chr2B 95.474 3071 82 21 4 3039 247926268 247923220 0.000000e+00 4848.0
20 TraesCS2D01G225200 chr2B 94.863 1674 58 9 6591 8238 247919583 247917912 0.000000e+00 2590.0
21 TraesCS2D01G225200 chr2B 87.222 540 62 6 8327 8863 703893487 703894022 7.610000e-170 608.0
22 TraesCS2D01G225200 chr2B 97.674 172 3 1 6262 6433 342280949 342280779 2.420000e-75 294.0
23 TraesCS2D01G225200 chr2B 91.279 172 15 0 6579 6750 594837199 594837028 1.490000e-57 235.0
24 TraesCS2D01G225200 chr2B 83.133 166 26 2 6435 6598 553605516 553605351 5.540000e-32 150.0
25 TraesCS2D01G225200 chr2B 89.076 119 7 5 6487 6601 680777731 680777847 9.280000e-30 143.0
26 TraesCS2D01G225200 chr5B 80.731 1121 133 35 6786 7869 54196724 54197798 0.000000e+00 797.0
27 TraesCS2D01G225200 chr5B 79.764 1102 158 32 6804 7872 54392614 54393683 0.000000e+00 739.0
28 TraesCS2D01G225200 chr5B 78.625 931 150 29 5233 6136 54195468 54196376 9.980000e-159 571.0
29 TraesCS2D01G225200 chr5B 80.305 655 74 25 972 1617 54193183 54193791 2.270000e-120 444.0
30 TraesCS2D01G225200 chr5B 77.809 712 114 31 1798 2495 54194017 54194698 4.990000e-107 399.0
31 TraesCS2D01G225200 chr5D 79.238 1103 162 32 6804 7872 51245789 51246858 0.000000e+00 706.0
32 TraesCS2D01G225200 chr5D 78.947 1102 167 30 6804 7872 51322399 51323468 0.000000e+00 689.0
33 TraesCS2D01G225200 chr5D 83.533 753 83 11 6786 7519 50978626 50979356 0.000000e+00 665.0
34 TraesCS2D01G225200 chr5D 81.784 527 63 21 2056 2567 50974930 50975438 2.300000e-110 411.0
35 TraesCS2D01G225200 chr5D 82.984 382 40 11 967 1348 50974566 50974922 1.110000e-83 322.0
36 TraesCS2D01G225200 chr5D 89.637 193 20 0 4937 5129 50975811 50976003 6.870000e-61 246.0
37 TraesCS2D01G225200 chr3B 86.500 600 65 9 8279 8863 132724050 132724648 0.000000e+00 645.0
38 TraesCS2D01G225200 chr3B 97.647 170 4 0 6264 6433 655849590 655849421 8.700000e-75 292.0
39 TraesCS2D01G225200 chr3B 89.418 189 4 4 6221 6407 642070064 642070238 3.220000e-54 224.0
40 TraesCS2D01G225200 chr3B 88.000 75 8 1 4175 4249 377861894 377861967 4.410000e-13 87.9
41 TraesCS2D01G225200 chr3B 86.667 75 10 0 4175 4249 421921544 421921470 5.700000e-12 84.2
42 TraesCS2D01G225200 chr3B 89.362 47 2 3 6219 6263 243250287 243250332 1.000000e-03 56.5
43 TraesCS2D01G225200 chr5A 77.996 1118 151 47 6786 7872 40474539 40475592 1.640000e-171 614.0
44 TraesCS2D01G225200 chr5A 86.581 544 64 6 8328 8863 268586659 268586117 7.660000e-165 592.0
45 TraesCS2D01G225200 chr5A 80.215 465 62 18 5459 5899 40471805 40472263 1.110000e-83 322.0
46 TraesCS2D01G225200 chr5A 98.802 167 2 0 6269 6435 640948257 640948091 1.870000e-76 298.0
47 TraesCS2D01G225200 chr5A 89.286 168 15 3 4931 5097 40469683 40469848 3.240000e-49 207.0
48 TraesCS2D01G225200 chr5A 76.650 197 37 4 5219 5414 40469889 40470077 5.660000e-17 100.0
49 TraesCS2D01G225200 chr6B 85.595 597 69 10 8279 8863 71846505 71845914 2.120000e-170 610.0
50 TraesCS2D01G225200 chr6B 81.898 569 76 20 5271 5825 126312850 126312295 1.050000e-123 455.0
51 TraesCS2D01G225200 chr6B 79.532 513 76 24 5259 5755 95563332 95562833 1.100000e-88 339.0
52 TraesCS2D01G225200 chr6B 81.818 363 46 13 1256 1605 95566760 95566405 4.050000e-73 287.0
53 TraesCS2D01G225200 chr6B 78.013 473 73 21 4688 5138 95563817 95563354 1.470000e-67 268.0
54 TraesCS2D01G225200 chr6B 84.274 248 38 1 4888 5135 126313124 126312878 3.200000e-59 241.0
55 TraesCS2D01G225200 chr6B 90.909 44 2 2 6226 6268 35376226 35376184 3.460000e-04 58.4
56 TraesCS2D01G225200 chr4D 85.763 583 67 10 8295 8863 385673932 385674512 3.540000e-168 603.0
57 TraesCS2D01G225200 chr4D 91.498 247 20 1 6497 6742 465124130 465124376 1.100000e-88 339.0
58 TraesCS2D01G225200 chr4D 95.580 181 6 2 6266 6444 74373295 74373115 1.130000e-73 289.0
59 TraesCS2D01G225200 chr4D 89.655 116 11 1 6487 6601 375175147 375175032 7.170000e-31 147.0
60 TraesCS2D01G225200 chr4D 76.856 229 32 16 6268 6488 465124377 465124162 9.410000e-20 110.0
61 TraesCS2D01G225200 chr4D 98.246 57 1 0 6433 6489 465124037 465124093 5.660000e-17 100.0
62 TraesCS2D01G225200 chr4D 98.113 53 1 0 6433 6485 375175050 375175102 9.480000e-15 93.5
63 TraesCS2D01G225200 chr4D 95.556 45 2 0 6223 6267 76611911 76611955 1.230000e-08 73.1
64 TraesCS2D01G225200 chr4D 95.122 41 1 1 6228 6267 459687906 459687866 7.430000e-06 63.9
65 TraesCS2D01G225200 chr6D 81.367 746 101 16 6786 7518 41603622 41604342 2.780000e-159 573.0
66 TraesCS2D01G225200 chr6D 81.658 567 77 20 5273 5825 56126314 56125761 6.310000e-121 446.0
67 TraesCS2D01G225200 chr6D 79.965 574 91 17 5259 5822 41602066 41602625 1.390000e-107 401.0
68 TraesCS2D01G225200 chr6D 82.065 368 42 15 1255 1608 41600295 41600652 8.700000e-75 292.0
69 TraesCS2D01G225200 chr6D 97.333 150 4 0 6597 6746 243033035 243032886 1.140000e-63 255.0
70 TraesCS2D01G225200 chr6D 83.871 248 39 1 4888 5135 56126590 56126344 1.490000e-57 235.0
71 TraesCS2D01G225200 chr6D 85.149 202 23 6 2296 2495 41600734 41600930 5.430000e-47 200.0
72 TraesCS2D01G225200 chr6D 86.228 167 15 5 6433 6598 418957146 418956987 3.290000e-39 174.0
73 TraesCS2D01G225200 chr3A 84.642 586 74 11 8292 8863 131407319 131407902 3.590000e-158 569.0
74 TraesCS2D01G225200 chr3D 84.220 545 73 9 8326 8863 141185197 141185735 1.320000e-142 518.0
75 TraesCS2D01G225200 chr3D 97.059 34 1 0 6235 6268 168186563 168186530 3.460000e-04 58.4
76 TraesCS2D01G225200 chr6A 81.122 588 82 15 6794 7368 52155611 52156182 2.270000e-120 444.0
77 TraesCS2D01G225200 chr6A 83.988 331 46 6 5495 5822 52154351 52154677 2.400000e-80 311.0
78 TraesCS2D01G225200 chr6A 87.843 255 22 4 1255 1500 52151245 52151499 3.130000e-74 291.0
79 TraesCS2D01G225200 chr6A 76.520 477 71 25 4684 5135 52153004 52153464 1.160000e-53 222.0
80 TraesCS2D01G225200 chr6A 85.075 201 24 5 2296 2495 52152155 52152350 5.430000e-47 200.0
81 TraesCS2D01G225200 chr6A 86.538 156 19 2 7364 7518 52169691 52169845 4.260000e-38 171.0
82 TraesCS2D01G225200 chr6A 85.455 165 19 4 6435 6598 100300576 100300416 5.500000e-37 167.0
83 TraesCS2D01G225200 chr6A 85.030 167 17 5 6433 6598 562528545 562528386 7.120000e-36 163.0
84 TraesCS2D01G225200 chr4A 97.191 178 4 1 6268 6444 582529976 582530153 5.200000e-77 300.0
85 TraesCS2D01G225200 chr4A 92.000 75 6 0 4175 4249 31559647 31559721 1.220000e-18 106.0
86 TraesCS2D01G225200 chr1D 96.571 175 4 2 6267 6441 360358222 360358394 1.130000e-73 289.0
87 TraesCS2D01G225200 chr1D 96.053 152 6 0 6602 6753 178466330 178466481 1.910000e-61 248.0
88 TraesCS2D01G225200 chr7D 93.902 164 4 6 6597 6758 525720983 525721142 8.890000e-60 243.0
89 TraesCS2D01G225200 chr7D 95.000 60 3 0 6429 6488 100233239 100233180 2.630000e-15 95.3
90 TraesCS2D01G225200 chrUn 82.938 211 16 11 2297 2497 30967878 30967678 1.180000e-38 172.0
91 TraesCS2D01G225200 chr4B 90.351 114 10 1 6487 6599 525268288 525268175 1.990000e-31 148.0
92 TraesCS2D01G225200 chr4B 92.000 75 6 0 4175 4249 424065225 424065299 1.220000e-18 106.0
93 TraesCS2D01G225200 chr4B 92.857 42 2 1 6228 6268 453079282 453079241 9.610000e-05 60.2
94 TraesCS2D01G225200 chr1A 88.000 75 9 0 4175 4249 244072775 244072849 1.230000e-13 89.8
95 TraesCS2D01G225200 chr1B 88.889 72 4 4 4175 4244 166483129 166483198 1.590000e-12 86.1
96 TraesCS2D01G225200 chr7B 89.362 47 3 1 6236 6280 246003590 246003636 3.460000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G225200 chr2D 192746136 192754999 8863 False 16369.000000 16369 100.000000 1 8864 1 chr2D.!!$F2 8863
1 TraesCS2D01G225200 chr2D 451872955 451873552 597 False 702.000000 702 88.147000 8276 8863 1 chr2D.!!$F3 587
2 TraesCS2D01G225200 chr2A 205200607 205209934 9327 True 2912.500000 5753 94.783250 12 8238 4 chr2A.!!$R4 8226
3 TraesCS2D01G225200 chr2A 761300097 761300695 598 False 575.000000 575 84.437000 8276 8863 1 chr2A.!!$F3 587
4 TraesCS2D01G225200 chr2B 247917912 247926268 8356 True 4197.666667 5155 95.307000 4 8238 3 chr2B.!!$R4 8234
5 TraesCS2D01G225200 chr2B 703893487 703894022 535 False 608.000000 608 87.222000 8327 8863 1 chr2B.!!$F2 536
6 TraesCS2D01G225200 chr5B 54392614 54393683 1069 False 739.000000 739 79.764000 6804 7872 1 chr5B.!!$F1 1068
7 TraesCS2D01G225200 chr5B 54193183 54197798 4615 False 552.750000 797 79.367500 972 7869 4 chr5B.!!$F2 6897
8 TraesCS2D01G225200 chr5D 51245789 51246858 1069 False 706.000000 706 79.238000 6804 7872 1 chr5D.!!$F1 1068
9 TraesCS2D01G225200 chr5D 51322399 51323468 1069 False 689.000000 689 78.947000 6804 7872 1 chr5D.!!$F2 1068
10 TraesCS2D01G225200 chr5D 50974566 50979356 4790 False 411.000000 665 84.484500 967 7519 4 chr5D.!!$F3 6552
11 TraesCS2D01G225200 chr3B 132724050 132724648 598 False 645.000000 645 86.500000 8279 8863 1 chr3B.!!$F1 584
12 TraesCS2D01G225200 chr5A 268586117 268586659 542 True 592.000000 592 86.581000 8328 8863 1 chr5A.!!$R1 535
13 TraesCS2D01G225200 chr5A 40469683 40475592 5909 False 310.750000 614 81.036750 4931 7872 4 chr5A.!!$F1 2941
14 TraesCS2D01G225200 chr6B 71845914 71846505 591 True 610.000000 610 85.595000 8279 8863 1 chr6B.!!$R2 584
15 TraesCS2D01G225200 chr6B 126312295 126313124 829 True 348.000000 455 83.086000 4888 5825 2 chr6B.!!$R4 937
16 TraesCS2D01G225200 chr6B 95562833 95566760 3927 True 298.000000 339 79.787667 1256 5755 3 chr6B.!!$R3 4499
17 TraesCS2D01G225200 chr4D 385673932 385674512 580 False 603.000000 603 85.763000 8295 8863 1 chr4D.!!$F3 568
18 TraesCS2D01G225200 chr6D 41600295 41604342 4047 False 366.500000 573 82.136500 1255 7518 4 chr6D.!!$F1 6263
19 TraesCS2D01G225200 chr6D 56125761 56126590 829 True 340.500000 446 82.764500 4888 5825 2 chr6D.!!$R3 937
20 TraesCS2D01G225200 chr3A 131407319 131407902 583 False 569.000000 569 84.642000 8292 8863 1 chr3A.!!$F1 571
21 TraesCS2D01G225200 chr3D 141185197 141185735 538 False 518.000000 518 84.220000 8326 8863 1 chr3D.!!$F1 537
22 TraesCS2D01G225200 chr6A 52151245 52156182 4937 False 293.600000 444 82.909600 1255 7368 5 chr6A.!!$F2 6113

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 568 1.079256 CAGGGTGAGACTCCTGGGA 59.921 63.158 0.0 0.00 44.99 4.37 F
1617 2126 0.933700 AAGAGGAGGAGGAGGAGGAG 59.066 60.000 0.0 0.00 0.00 3.69 F
3336 5533 0.036010 CAGAACGCCTGATTCCACCT 60.036 55.000 0.0 0.00 45.78 4.00 F
3337 5534 0.036010 AGAACGCCTGATTCCACCTG 60.036 55.000 0.0 0.00 0.00 4.00 F
3339 5536 0.036010 AACGCCTGATTCCACCTGAG 60.036 55.000 0.0 0.00 0.00 3.35 F
3343 5540 0.621571 CCTGATTCCACCTGAGGGGA 60.622 60.000 0.0 3.01 38.76 4.81 F
4425 7773 1.270550 CATGATCGCCAATTAAGCCCC 59.729 52.381 0.0 0.00 0.00 5.80 F
6467 15333 0.250513 GTGCTTCCCGAGATCCAAGT 59.749 55.000 0.0 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 2140 0.037605 GGGAAACGTCACCTCGTCAT 60.038 55.000 10.10 0.0 43.38 3.06 R
3341 5538 1.134788 CGCATCTCGGGGGTATATTCC 60.135 57.143 0.00 0.0 33.78 3.01 R
5266 8989 1.257415 CATGCTCATCTTCTTCGTCGC 59.743 52.381 0.00 0.0 0.00 5.19 R
5267 8990 2.533535 GTCATGCTCATCTTCTTCGTCG 59.466 50.000 0.00 0.0 0.00 5.12 R
5397 9121 3.310954 ACCCATCTCAGTTAGTCCCAGAT 60.311 47.826 0.00 0.0 0.00 2.90 R
5560 11616 8.954950 AGTTCATATAAAAGATGGACAGACAG 57.045 34.615 0.00 0.0 35.54 3.51 R
6563 15429 0.165944 ACAATGTAGTTTGCTCGCGC 59.834 50.000 0.00 0.0 0.00 6.86 R
8026 16970 0.253327 GCTGAGGAAATCTTCGGGGT 59.747 55.000 3.87 0.0 0.00 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 69 8.839310 AGATGTGTTGAATAGAATAGCCATAC 57.161 34.615 0.00 0.00 0.00 2.39
93 99 9.277783 AGATAATAATGGCAGTAAACAAGCTAG 57.722 33.333 0.00 0.00 0.00 3.42
104 110 2.206576 ACAAGCTAGCCCTCAAAAGG 57.793 50.000 12.13 0.00 42.95 3.11
216 222 9.790433 CCACACAAATTAAACATTTGTAAATCG 57.210 29.630 11.59 3.76 46.73 3.34
252 258 3.496331 ACACACCTTTCCACCAAATAGG 58.504 45.455 0.00 0.00 45.67 2.57
275 281 1.694696 AGGTGAAAGAGGCTCGTTTCT 59.305 47.619 25.61 17.71 34.37 2.52
365 373 5.740290 ACGAGAGAAGGTAAAAGGATCAA 57.260 39.130 0.00 0.00 0.00 2.57
367 375 6.712276 ACGAGAGAAGGTAAAAGGATCAAAT 58.288 36.000 0.00 0.00 0.00 2.32
370 378 9.162764 CGAGAGAAGGTAAAAGGATCAAATAAA 57.837 33.333 0.00 0.00 0.00 1.40
560 568 1.079256 CAGGGTGAGACTCCTGGGA 59.921 63.158 0.00 0.00 44.99 4.37
599 607 1.138036 CGCGGTGAGGTAATCGTCA 59.862 57.895 0.00 0.00 36.34 4.35
961 982 1.492176 CTCCATACCCTTGCACATCCT 59.508 52.381 0.00 0.00 0.00 3.24
1059 1080 5.307716 TCAAAAGAAGGCCAAGAAATCCAAT 59.692 36.000 5.01 0.00 0.00 3.16
1506 1547 3.010696 AGGGGGATGAAAAGGAGAAAGAC 59.989 47.826 0.00 0.00 0.00 3.01
1617 2126 0.933700 AAGAGGAGGAGGAGGAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
1618 2127 0.998945 AGAGGAGGAGGAGGAGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
1619 2128 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1620 2129 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1621 2130 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1622 2131 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1623 2132 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1624 2133 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1625 2134 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1626 2135 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1627 2136 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1628 2137 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1629 2138 1.231928 GGAGGAGGAGGAGGAGGAC 59.768 68.421 0.00 0.00 0.00 3.85
1630 2139 1.152839 GAGGAGGAGGAGGAGGACG 60.153 68.421 0.00 0.00 0.00 4.79
1631 2140 1.619975 AGGAGGAGGAGGAGGACGA 60.620 63.158 0.00 0.00 0.00 4.20
1657 2166 0.879090 GGTGACGTTTCCCATCCAAC 59.121 55.000 0.00 0.00 0.00 3.77
1708 2217 6.649155 TCTCTGCTATTGTAAAGGTTGCATA 58.351 36.000 0.00 0.00 0.00 3.14
1863 2474 6.851609 TGTTTAATTCCATCTTTCATGTCGG 58.148 36.000 0.00 0.00 0.00 4.79
1900 2511 7.531857 TGTTTTAATTCCAACTATGAAGGCA 57.468 32.000 0.00 0.00 0.00 4.75
1968 3872 3.393800 TGTGCTTGCTGTAGTCTTCTTC 58.606 45.455 0.00 0.00 0.00 2.87
2102 4007 7.551262 ACTGCGACTCTAGATCTTATATACTGG 59.449 40.741 0.00 0.00 0.00 4.00
2183 4089 9.444600 TCTTAGGTAGGTCATGTGTTTTTATTC 57.555 33.333 0.00 0.00 0.00 1.75
2243 4149 6.877322 TGGGACACTTTACTAGCTGTATTTTC 59.123 38.462 0.00 0.00 0.00 2.29
2445 4356 5.373222 AGGTGTGTGCACTAGTTCATTAAA 58.627 37.500 19.41 0.00 44.65 1.52
2802 4804 1.267121 CACTAGGTGGTAGGCACTGT 58.733 55.000 0.00 0.00 41.52 3.55
2956 4958 4.646572 TGCCCTTTTGTTCAAAACTGTTT 58.353 34.783 0.00 0.00 0.00 2.83
3158 5354 3.190118 GCAACATCCTCAAGAAAGACCTG 59.810 47.826 0.00 0.00 0.00 4.00
3257 5454 5.231991 GTGTTCGGTTTCAGTAACGAAGTAA 59.768 40.000 0.00 0.00 45.00 2.24
3288 5485 1.625818 GTCTGTGATGTCCCTGACCTT 59.374 52.381 0.00 0.00 0.00 3.50
3325 5522 0.790814 CGAGAGGAAAACAGAACGCC 59.209 55.000 0.00 0.00 0.00 5.68
3326 5523 1.605712 CGAGAGGAAAACAGAACGCCT 60.606 52.381 0.00 0.00 0.00 5.52
3328 5525 1.416401 AGAGGAAAACAGAACGCCTGA 59.584 47.619 11.74 0.00 45.78 3.86
3329 5526 2.039084 AGAGGAAAACAGAACGCCTGAT 59.961 45.455 11.74 0.00 45.78 2.90
3330 5527 2.814336 GAGGAAAACAGAACGCCTGATT 59.186 45.455 11.74 4.13 45.78 2.57
3331 5528 2.814336 AGGAAAACAGAACGCCTGATTC 59.186 45.455 11.74 13.23 45.78 2.52
3332 5529 2.095212 GGAAAACAGAACGCCTGATTCC 60.095 50.000 20.15 20.15 45.78 3.01
3333 5530 2.270352 AAACAGAACGCCTGATTCCA 57.730 45.000 11.74 0.00 45.78 3.53
3334 5531 1.523758 AACAGAACGCCTGATTCCAC 58.476 50.000 11.74 0.00 45.78 4.02
3335 5532 0.321653 ACAGAACGCCTGATTCCACC 60.322 55.000 11.74 0.00 45.78 4.61
3336 5533 0.036010 CAGAACGCCTGATTCCACCT 60.036 55.000 0.00 0.00 45.78 4.00
3337 5534 0.036010 AGAACGCCTGATTCCACCTG 60.036 55.000 0.00 0.00 0.00 4.00
3338 5535 0.036388 GAACGCCTGATTCCACCTGA 60.036 55.000 0.00 0.00 0.00 3.86
3339 5536 0.036010 AACGCCTGATTCCACCTGAG 60.036 55.000 0.00 0.00 0.00 3.35
3340 5537 1.153289 CGCCTGATTCCACCTGAGG 60.153 63.158 0.00 0.00 0.00 3.86
3341 5538 1.225704 GCCTGATTCCACCTGAGGG 59.774 63.158 2.38 0.00 38.88 4.30
3342 5539 1.918253 CCTGATTCCACCTGAGGGG 59.082 63.158 2.38 0.00 41.89 4.79
3343 5540 0.621571 CCTGATTCCACCTGAGGGGA 60.622 60.000 0.00 3.01 38.76 4.81
3674 5891 2.095466 CCGCATCTACTTCCTCTCGATC 60.095 54.545 0.00 0.00 0.00 3.69
3750 7040 1.409064 CACAGCTCTATCACCGGCTTA 59.591 52.381 0.00 0.00 32.30 3.09
4016 7360 4.022068 GTGAAGGTGCAAGGAATCAAATCA 60.022 41.667 0.00 0.00 0.00 2.57
4189 7536 2.140717 GACGAAACCAAACACCGAGAT 58.859 47.619 0.00 0.00 0.00 2.75
4281 7628 3.958018 TGTTCTACAACCAAACACACCT 58.042 40.909 0.00 0.00 0.00 4.00
4374 7722 7.094506 ACCATAGAACAATTCCGGAGTAAAAAC 60.095 37.037 3.34 0.00 0.00 2.43
4425 7773 1.270550 CATGATCGCCAATTAAGCCCC 59.729 52.381 0.00 0.00 0.00 5.80
4487 7835 2.154462 CACCACTCCACAAAGTCATCC 58.846 52.381 0.00 0.00 0.00 3.51
4927 8606 4.142403 TGTTTTGCTTCTTGAGTTCAGTGG 60.142 41.667 0.00 0.00 0.00 4.00
4928 8607 1.597742 TGCTTCTTGAGTTCAGTGGC 58.402 50.000 0.00 0.00 0.00 5.01
5165 8855 1.532868 GGCAATGACAGTGACAGTGAC 59.467 52.381 23.47 18.51 35.76 3.67
5206 8896 2.162681 TCGTGAGCATGACTCTGAAGA 58.837 47.619 15.20 8.47 46.41 2.87
5207 8897 2.757314 TCGTGAGCATGACTCTGAAGAT 59.243 45.455 15.20 0.00 46.41 2.40
5208 8898 2.858941 CGTGAGCATGACTCTGAAGATG 59.141 50.000 15.20 0.00 46.41 2.90
5209 8899 3.428589 CGTGAGCATGACTCTGAAGATGA 60.429 47.826 15.20 0.00 46.41 2.92
5210 8900 3.864583 GTGAGCATGACTCTGAAGATGAC 59.135 47.826 15.20 2.96 46.41 3.06
5211 8901 3.512724 TGAGCATGACTCTGAAGATGACA 59.487 43.478 15.20 0.00 46.41 3.58
5212 8902 4.020839 TGAGCATGACTCTGAAGATGACAA 60.021 41.667 15.20 0.00 46.41 3.18
5213 8903 5.100344 AGCATGACTCTGAAGATGACAAT 57.900 39.130 0.00 0.00 0.00 2.71
5214 8904 4.876679 AGCATGACTCTGAAGATGACAATG 59.123 41.667 0.00 0.00 0.00 2.82
5215 8905 4.874396 GCATGACTCTGAAGATGACAATGA 59.126 41.667 0.00 0.00 0.00 2.57
5216 8906 5.527951 GCATGACTCTGAAGATGACAATGAT 59.472 40.000 0.00 0.00 0.00 2.45
5217 8907 6.704937 GCATGACTCTGAAGATGACAATGATA 59.295 38.462 0.00 0.00 0.00 2.15
5266 8989 2.872245 ACAATGACAGTGTTGAAGACGG 59.128 45.455 1.98 0.00 0.00 4.79
5267 8990 1.512926 ATGACAGTGTTGAAGACGGC 58.487 50.000 0.00 0.00 0.00 5.68
5560 11616 3.004734 GTGTGCATATGTCCAAATAGCCC 59.995 47.826 4.29 0.00 0.00 5.19
6140 13069 7.168302 CGATGAACAGGTTAGCTCTATTACTTG 59.832 40.741 0.00 0.00 0.00 3.16
6187 15052 8.684386 TTCTTGGAACAGTTGTGAATTATGTA 57.316 30.769 0.00 0.00 42.39 2.29
6250 15116 2.024273 TCAATCTACTCCCTCCGTTCCT 60.024 50.000 0.00 0.00 0.00 3.36
6251 15117 3.203710 TCAATCTACTCCCTCCGTTCCTA 59.796 47.826 0.00 0.00 0.00 2.94
6256 15122 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
6257 15123 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
6258 15124 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
6259 15125 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
6260 15126 2.367894 CCCTCCGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
6262 15128 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
6263 15129 3.303049 TCCGTTCCTAAATACTCCCTCC 58.697 50.000 0.00 0.00 0.00 4.30
6266 15132 4.102681 CCGTTCCTAAATACTCCCTCCATT 59.897 45.833 0.00 0.00 0.00 3.16
6267 15133 5.298347 CGTTCCTAAATACTCCCTCCATTC 58.702 45.833 0.00 0.00 0.00 2.67
6268 15134 5.070580 CGTTCCTAAATACTCCCTCCATTCT 59.929 44.000 0.00 0.00 0.00 2.40
6269 15135 6.267014 CGTTCCTAAATACTCCCTCCATTCTA 59.733 42.308 0.00 0.00 0.00 2.10
6270 15136 7.443477 GTTCCTAAATACTCCCTCCATTCTAC 58.557 42.308 0.00 0.00 0.00 2.59
6274 15140 2.480642 ACTCCCTCCATTCTACTCCC 57.519 55.000 0.00 0.00 0.00 4.30
6276 15142 2.090999 ACTCCCTCCATTCTACTCCCTC 60.091 54.545 0.00 0.00 0.00 4.30
6278 15144 1.333177 CCTCCATTCTACTCCCTCCG 58.667 60.000 0.00 0.00 0.00 4.63
6279 15145 1.411787 CCTCCATTCTACTCCCTCCGT 60.412 57.143 0.00 0.00 0.00 4.69
6280 15146 2.389715 CTCCATTCTACTCCCTCCGTT 58.610 52.381 0.00 0.00 0.00 4.44
6281 15147 2.362717 CTCCATTCTACTCCCTCCGTTC 59.637 54.545 0.00 0.00 0.00 3.95
6283 15149 2.389715 CATTCTACTCCCTCCGTTCCT 58.610 52.381 0.00 0.00 0.00 3.36
6285 15151 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
6286 15152 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
6287 15153 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
6288 15154 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
6291 15157 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
6292 15158 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
6293 15159 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
6294 15160 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
6295 15161 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
6299 15165 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
6316 15182 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
6317 15183 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
6334 15200 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
6335 15201 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
6336 15202 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
6337 15203 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
6338 15204 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
6339 15205 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
6340 15206 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
6341 15207 6.432607 ACCACATACGGATGTATATAGACG 57.567 41.667 14.23 0.00 44.82 4.18
6344 15210 7.772292 ACCACATACGGATGTATATAGACGTAT 59.228 37.037 14.23 12.37 44.82 3.06
6345 15211 8.618677 CCACATACGGATGTATATAGACGTATT 58.381 37.037 14.23 7.47 44.82 1.89
6373 15239 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
6374 15240 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
6375 15241 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
6376 15242 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
6378 15244 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
6379 15245 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
6381 15247 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
6382 15248 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
6384 15250 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
6385 15251 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
6386 15252 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
6387 15253 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
6388 15254 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
6389 15255 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
6392 15258 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
6394 15260 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
6397 15263 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
6398 15264 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
6399 15265 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
6400 15266 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
6401 15267 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
6402 15268 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
6403 15269 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
6405 15271 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
6406 15272 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
6407 15273 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
6408 15274 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
6409 15275 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
6411 15277 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
6427 15293 9.379791 AGAAAGACAAATATTTAGTAACGGAGG 57.620 33.333 0.00 0.00 0.00 4.30
6428 15294 9.159364 GAAAGACAAATATTTAGTAACGGAGGT 57.841 33.333 0.00 0.00 0.00 3.85
6430 15296 9.813446 AAGACAAATATTTAGTAACGGAGGTAG 57.187 33.333 0.00 0.00 0.00 3.18
6431 15297 8.975295 AGACAAATATTTAGTAACGGAGGTAGT 58.025 33.333 0.00 0.00 0.00 2.73
6438 15304 7.466746 TTTAGTAACGGAGGTAGTACAATGT 57.533 36.000 2.06 0.00 0.00 2.71
6439 15305 8.574251 TTTAGTAACGGAGGTAGTACAATGTA 57.426 34.615 2.06 0.00 0.00 2.29
6440 15306 6.690194 AGTAACGGAGGTAGTACAATGTAG 57.310 41.667 2.06 0.00 0.00 2.74
6441 15307 6.183347 AGTAACGGAGGTAGTACAATGTAGT 58.817 40.000 5.99 5.99 0.00 2.73
6442 15308 4.978083 ACGGAGGTAGTACAATGTAGTG 57.022 45.455 10.78 0.00 0.00 2.74
6445 15311 3.114065 GAGGTAGTACAATGTAGTGCGC 58.886 50.000 10.78 0.00 0.00 6.09
6446 15312 2.159142 AGGTAGTACAATGTAGTGCGCC 60.159 50.000 10.78 9.72 0.00 6.53
6447 15313 2.199236 GTAGTACAATGTAGTGCGCCC 58.801 52.381 10.78 0.00 0.00 6.13
6449 15315 0.738412 GTACAATGTAGTGCGCCCGT 60.738 55.000 4.18 0.00 0.00 5.28
6450 15316 0.738063 TACAATGTAGTGCGCCCGTG 60.738 55.000 4.18 0.00 0.00 4.94
6451 15317 3.124921 AATGTAGTGCGCCCGTGC 61.125 61.111 4.18 0.00 0.00 5.34
6454 15320 3.488090 GTAGTGCGCCCGTGCTTC 61.488 66.667 4.18 0.00 35.36 3.86
6455 15321 4.752879 TAGTGCGCCCGTGCTTCC 62.753 66.667 4.18 0.00 35.36 3.46
6461 15327 4.162690 GCCCGTGCTTCCCGAGAT 62.163 66.667 0.00 0.00 33.53 2.75
6463 15329 2.107141 CCGTGCTTCCCGAGATCC 59.893 66.667 0.00 0.00 0.00 3.36
6466 15332 0.807667 CGTGCTTCCCGAGATCCAAG 60.808 60.000 0.00 0.00 0.00 3.61
6467 15333 0.250513 GTGCTTCCCGAGATCCAAGT 59.749 55.000 0.00 0.00 0.00 3.16
6468 15334 0.984230 TGCTTCCCGAGATCCAAGTT 59.016 50.000 0.00 0.00 0.00 2.66
6469 15335 1.351017 TGCTTCCCGAGATCCAAGTTT 59.649 47.619 0.00 0.00 0.00 2.66
6470 15336 1.740025 GCTTCCCGAGATCCAAGTTTG 59.260 52.381 0.00 0.00 0.00 2.93
6471 15337 2.615493 GCTTCCCGAGATCCAAGTTTGA 60.615 50.000 0.00 0.00 0.00 2.69
6472 15338 2.762535 TCCCGAGATCCAAGTTTGAC 57.237 50.000 0.00 0.00 0.00 3.18
6473 15339 1.278127 TCCCGAGATCCAAGTTTGACC 59.722 52.381 0.00 0.00 0.00 4.02
6474 15340 1.359848 CCGAGATCCAAGTTTGACCG 58.640 55.000 0.00 0.00 0.00 4.79
6477 15343 3.581755 CGAGATCCAAGTTTGACCGTAA 58.418 45.455 0.00 0.00 0.00 3.18
6479 15345 4.630069 CGAGATCCAAGTTTGACCGTAAAT 59.370 41.667 0.00 0.00 0.00 1.40
6480 15346 5.121768 CGAGATCCAAGTTTGACCGTAAATT 59.878 40.000 0.00 0.00 0.00 1.82
6481 15347 6.348213 CGAGATCCAAGTTTGACCGTAAATTT 60.348 38.462 0.00 0.00 0.00 1.82
6482 15348 7.148540 CGAGATCCAAGTTTGACCGTAAATTTA 60.149 37.037 0.00 0.00 0.00 1.40
6484 15350 8.294577 AGATCCAAGTTTGACCGTAAATTTAAC 58.705 33.333 0.00 0.00 0.00 2.01
6487 15353 6.979238 CCAAGTTTGACCGTAAATTTAACCAA 59.021 34.615 0.00 0.05 0.00 3.67
6488 15354 7.654116 CCAAGTTTGACCGTAAATTTAACCAAT 59.346 33.333 0.00 0.00 0.00 3.16
6489 15355 9.036671 CAAGTTTGACCGTAAATTTAACCAATT 57.963 29.630 0.00 0.00 36.57 2.32
6490 15356 8.806177 AGTTTGACCGTAAATTTAACCAATTC 57.194 30.769 0.00 0.00 33.60 2.17
6491 15357 8.414778 AGTTTGACCGTAAATTTAACCAATTCA 58.585 29.630 0.00 0.00 33.60 2.57
6492 15358 8.696175 GTTTGACCGTAAATTTAACCAATTCAG 58.304 33.333 0.00 0.00 33.60 3.02
6493 15359 7.513371 TGACCGTAAATTTAACCAATTCAGT 57.487 32.000 0.00 0.00 33.60 3.41
6494 15360 7.364200 TGACCGTAAATTTAACCAATTCAGTG 58.636 34.615 0.00 0.00 33.60 3.66
6495 15361 6.683715 ACCGTAAATTTAACCAATTCAGTGG 58.316 36.000 0.00 0.00 44.92 4.00
6509 15375 8.411318 CCAATTCAGTGGTATAATTTTTGCTC 57.589 34.615 0.00 0.00 33.63 4.26
6510 15376 7.492344 CCAATTCAGTGGTATAATTTTTGCTCC 59.508 37.037 0.00 0.00 33.63 4.70
6511 15377 6.524101 TTCAGTGGTATAATTTTTGCTCCC 57.476 37.500 0.00 0.00 0.00 4.30
6512 15378 4.638421 TCAGTGGTATAATTTTTGCTCCCG 59.362 41.667 0.00 0.00 0.00 5.14
6513 15379 3.380320 AGTGGTATAATTTTTGCTCCCGC 59.620 43.478 0.00 0.00 0.00 6.13
6514 15380 2.691011 TGGTATAATTTTTGCTCCCGCC 59.309 45.455 0.00 0.00 34.43 6.13
6515 15381 2.691011 GGTATAATTTTTGCTCCCGCCA 59.309 45.455 0.00 0.00 34.43 5.69
6516 15382 2.959507 ATAATTTTTGCTCCCGCCAC 57.040 45.000 0.00 0.00 34.43 5.01
6517 15383 1.621992 TAATTTTTGCTCCCGCCACA 58.378 45.000 0.00 0.00 34.43 4.17
6518 15384 0.318120 AATTTTTGCTCCCGCCACAG 59.682 50.000 0.00 0.00 34.43 3.66
6519 15385 0.827507 ATTTTTGCTCCCGCCACAGT 60.828 50.000 0.00 0.00 34.43 3.55
6520 15386 1.452145 TTTTTGCTCCCGCCACAGTC 61.452 55.000 0.00 0.00 34.43 3.51
6521 15387 4.680237 TTGCTCCCGCCACAGTCG 62.680 66.667 0.00 0.00 34.43 4.18
6524 15390 4.003788 CTCCCGCCACAGTCGGTT 62.004 66.667 0.35 0.00 45.09 4.44
6525 15391 3.530910 CTCCCGCCACAGTCGGTTT 62.531 63.158 0.35 0.00 45.09 3.27
6526 15392 3.047877 CCCGCCACAGTCGGTTTC 61.048 66.667 0.35 0.00 45.09 2.78
6527 15393 3.047877 CCGCCACAGTCGGTTTCC 61.048 66.667 0.00 0.00 41.85 3.13
6528 15394 2.030562 CGCCACAGTCGGTTTCCT 59.969 61.111 0.00 0.00 0.00 3.36
6529 15395 1.597027 CGCCACAGTCGGTTTCCTT 60.597 57.895 0.00 0.00 0.00 3.36
6530 15396 1.841663 CGCCACAGTCGGTTTCCTTG 61.842 60.000 0.00 0.00 0.00 3.61
6531 15397 0.818040 GCCACAGTCGGTTTCCTTGT 60.818 55.000 0.00 0.00 0.00 3.16
6532 15398 1.675552 CCACAGTCGGTTTCCTTGTT 58.324 50.000 0.00 0.00 0.00 2.83
6533 15399 2.841215 CCACAGTCGGTTTCCTTGTTA 58.159 47.619 0.00 0.00 0.00 2.41
6534 15400 3.207778 CCACAGTCGGTTTCCTTGTTAA 58.792 45.455 0.00 0.00 0.00 2.01
6535 15401 3.628487 CCACAGTCGGTTTCCTTGTTAAA 59.372 43.478 0.00 0.00 0.00 1.52
6536 15402 4.277423 CCACAGTCGGTTTCCTTGTTAAAT 59.723 41.667 0.00 0.00 0.00 1.40
6537 15403 5.221165 CCACAGTCGGTTTCCTTGTTAAATT 60.221 40.000 0.00 0.00 0.00 1.82
6538 15404 6.270064 CACAGTCGGTTTCCTTGTTAAATTT 58.730 36.000 0.00 0.00 0.00 1.82
6539 15405 7.419204 CACAGTCGGTTTCCTTGTTAAATTTA 58.581 34.615 0.00 0.00 0.00 1.40
6540 15406 7.377662 CACAGTCGGTTTCCTTGTTAAATTTAC 59.622 37.037 0.00 0.00 0.00 2.01
6541 15407 7.067251 ACAGTCGGTTTCCTTGTTAAATTTACA 59.933 33.333 0.00 0.00 0.00 2.41
6542 15408 7.589954 CAGTCGGTTTCCTTGTTAAATTTACAG 59.410 37.037 0.00 0.00 0.00 2.74
6543 15409 7.283807 AGTCGGTTTCCTTGTTAAATTTACAGT 59.716 33.333 0.00 0.00 0.00 3.55
6544 15410 7.588854 GTCGGTTTCCTTGTTAAATTTACAGTC 59.411 37.037 0.00 0.00 0.00 3.51
6545 15411 7.282675 TCGGTTTCCTTGTTAAATTTACAGTCA 59.717 33.333 0.00 0.00 0.00 3.41
6546 15412 7.916450 CGGTTTCCTTGTTAAATTTACAGTCAA 59.084 33.333 0.00 1.77 0.00 3.18
6547 15413 9.589111 GGTTTCCTTGTTAAATTTACAGTCAAA 57.411 29.630 0.00 0.00 0.00 2.69
6551 15417 9.796120 TCCTTGTTAAATTTACAGTCAAACTTG 57.204 29.630 0.00 0.00 0.00 3.16
6552 15418 9.796120 CCTTGTTAAATTTACAGTCAAACTTGA 57.204 29.630 0.00 0.00 34.20 3.02
6559 15425 6.539649 TTTACAGTCAAACTTGAATCTCGG 57.460 37.500 0.00 0.00 39.21 4.63
6560 15426 3.403038 ACAGTCAAACTTGAATCTCGGG 58.597 45.455 0.00 0.00 39.21 5.14
6561 15427 3.071023 ACAGTCAAACTTGAATCTCGGGA 59.929 43.478 0.00 0.00 39.21 5.14
6562 15428 4.065088 CAGTCAAACTTGAATCTCGGGAA 58.935 43.478 0.00 0.00 39.21 3.97
6563 15429 4.153117 CAGTCAAACTTGAATCTCGGGAAG 59.847 45.833 0.00 0.00 39.21 3.46
6564 15430 3.074412 TCAAACTTGAATCTCGGGAAGC 58.926 45.455 0.00 0.00 33.55 3.86
6565 15431 1.726853 AACTTGAATCTCGGGAAGCG 58.273 50.000 0.00 0.00 0.00 4.68
6566 15432 0.741221 ACTTGAATCTCGGGAAGCGC 60.741 55.000 0.00 0.00 0.00 5.92
6567 15433 1.756375 CTTGAATCTCGGGAAGCGCG 61.756 60.000 0.00 0.00 41.10 6.86
6568 15434 2.104331 GAATCTCGGGAAGCGCGA 59.896 61.111 12.10 6.43 45.83 5.87
6583 15449 1.869503 CGCGAGCAAACTACATTGTG 58.130 50.000 0.00 0.00 32.80 3.33
6584 15450 1.464023 CGCGAGCAAACTACATTGTGG 60.464 52.381 0.00 0.00 32.80 4.17
6585 15451 1.804151 GCGAGCAAACTACATTGTGGA 59.196 47.619 7.20 0.00 32.80 4.02
6586 15452 2.225491 GCGAGCAAACTACATTGTGGAA 59.775 45.455 7.20 0.00 32.80 3.53
6587 15453 3.119849 GCGAGCAAACTACATTGTGGAAT 60.120 43.478 7.20 0.00 32.80 3.01
6588 15454 4.406069 CGAGCAAACTACATTGTGGAATG 58.594 43.478 7.20 6.41 44.11 2.67
6589 15455 4.154015 CGAGCAAACTACATTGTGGAATGA 59.846 41.667 7.20 0.00 41.49 2.57
6683 15549 5.412594 TGTGTAGATTCACTCATTTTGCTCC 59.587 40.000 0.00 0.00 38.90 4.70
6865 15750 4.788201 GCGAGTGATAGTGAGTCAGATGAC 60.788 50.000 4.77 4.77 45.08 3.06
7273 16188 2.163509 GGGAAAGGAAAGGACAAGCTC 58.836 52.381 0.00 0.00 0.00 4.09
7572 16504 9.201989 CCATCCTACTATTGTATAATCTGCCTA 57.798 37.037 0.00 0.00 0.00 3.93
7594 16527 7.201821 GCCTAACCTGCATTACTGTAATTGATT 60.202 37.037 10.25 4.53 0.00 2.57
7614 16549 8.408043 TTGATTCTGACTGAATGGTTTTGTAT 57.592 30.769 11.84 0.00 44.70 2.29
7667 16608 3.058160 GAAGGGCGTGCATGCAGT 61.058 61.111 30.79 15.33 36.28 4.40
7668 16609 2.598394 AAGGGCGTGCATGCAGTT 60.598 55.556 30.79 20.11 36.28 3.16
7874 16818 5.850653 CGAGTGAACGATAGAGAAGATGATG 59.149 44.000 0.00 0.00 41.38 3.07
7891 16835 4.623932 TGATGGTCTTGGCCTGATATAC 57.376 45.455 3.32 0.00 0.00 1.47
7898 16842 5.105146 GGTCTTGGCCTGATATACTCCTATG 60.105 48.000 3.32 0.00 0.00 2.23
7899 16843 5.717178 GTCTTGGCCTGATATACTCCTATGA 59.283 44.000 3.32 0.00 0.00 2.15
7929 16873 2.165167 TGAAAATGCCTCTGAAGCCTG 58.835 47.619 0.00 0.00 0.00 4.85
7985 16929 8.928733 CATTTTTGGACTTTGATAGAACAATGG 58.071 33.333 0.00 0.00 31.95 3.16
8030 16974 7.147532 CCCTGTTAGGCTAGATAAATATACCCC 60.148 44.444 0.00 0.00 32.73 4.95
8039 16983 9.315525 GCTAGATAAATATACCCCGAAGATTTC 57.684 37.037 0.00 0.00 0.00 2.17
8060 17004 1.440850 CAGCCGTTCATGTGCAACG 60.441 57.895 10.33 10.33 45.03 4.10
8111 17055 7.058023 TGGCTGTTACGGTATTCAACTATAT 57.942 36.000 0.00 0.00 0.00 0.86
8129 17073 9.206870 CAACTATATTGAATGTTGGCTTTTTGT 57.793 29.630 0.00 0.00 36.94 2.83
8167 17112 3.268603 TGGCACTCGCACGTGTTG 61.269 61.111 18.38 10.48 41.24 3.33
8233 17178 3.060828 TCCAAGGTGGAAGCGTCTA 57.939 52.632 0.00 0.00 45.00 2.59
8238 17183 3.132289 CCAAGGTGGAAGCGTCTATAAGA 59.868 47.826 0.00 0.00 40.96 2.10
8239 17184 4.363999 CAAGGTGGAAGCGTCTATAAGAG 58.636 47.826 0.00 0.00 40.95 2.85
8240 17185 2.362717 AGGTGGAAGCGTCTATAAGAGC 59.637 50.000 0.00 0.00 40.95 4.09
8241 17186 2.100916 GGTGGAAGCGTCTATAAGAGCA 59.899 50.000 0.00 0.00 0.00 4.26
8242 17187 3.243907 GGTGGAAGCGTCTATAAGAGCAT 60.244 47.826 0.00 0.00 0.00 3.79
8243 17188 3.984633 GTGGAAGCGTCTATAAGAGCATC 59.015 47.826 0.00 0.00 0.00 3.91
8255 17200 1.994467 GAGCATCTCAACAGACGCG 59.006 57.895 3.53 3.53 42.93 6.01
8256 17201 1.416813 GAGCATCTCAACAGACGCGG 61.417 60.000 12.47 0.00 42.93 6.46
8257 17202 3.084579 CATCTCAACAGACGCGGC 58.915 61.111 12.47 7.86 0.00 6.53
8258 17203 2.507102 ATCTCAACAGACGCGGCG 60.507 61.111 22.36 22.36 0.00 6.46
8293 17238 1.447140 GCGATATATTGGCCGCCGA 60.447 57.895 0.48 0.48 41.59 5.54
8378 17330 8.648557 TTCAATATAGGACGAACAAGATCAAG 57.351 34.615 0.00 0.00 0.00 3.02
8381 17333 3.340814 AGGACGAACAAGATCAAGCAT 57.659 42.857 0.00 0.00 0.00 3.79
8394 17351 8.028938 ACAAGATCAAGCATACATAAAACAACC 58.971 33.333 0.00 0.00 0.00 3.77
8519 17483 9.515020 AAACATACAACATCAACTAGTTTTGTG 57.485 29.630 24.09 16.97 0.00 3.33
8528 17492 5.690865 TCAACTAGTTTTGTGGTCCATTCT 58.309 37.500 5.07 0.00 0.00 2.40
8598 17563 1.800586 GCACGTCGAATGGCATGATAT 59.199 47.619 0.00 0.00 0.00 1.63
8613 17578 4.083110 GCATGATATGAGGCAATAAAGCGT 60.083 41.667 0.00 0.00 34.64 5.07
8616 17581 1.755179 ATGAGGCAATAAAGCGTGCT 58.245 45.000 0.00 0.00 40.70 4.40
8631 17596 0.400594 GTGCTACCCTCACAACCCTT 59.599 55.000 0.00 0.00 34.73 3.95
8668 17633 2.344025 GACGTCCCAACAACTCATACC 58.656 52.381 3.51 0.00 0.00 2.73
8688 17653 9.132923 TCATACCGAGAATAGTCTAAATCTTGT 57.867 33.333 0.00 8.59 32.80 3.16
8701 17667 8.807118 AGTCTAAATCTTGTCACACTCATTCTA 58.193 33.333 0.00 0.00 0.00 2.10
8741 17707 6.514376 GCATGATCACACAAGCATTCATGATA 60.514 38.462 13.29 0.00 41.74 2.15
8778 17745 4.310022 TGATCCCAAAATCTAACCGGTT 57.690 40.909 25.64 25.64 0.00 4.44
8791 17758 5.014858 TCTAACCGGTTCTCTCACAATAGT 58.985 41.667 26.16 0.00 0.00 2.12
8799 17766 6.816640 CGGTTCTCTCACAATAGTAAATTGGA 59.183 38.462 3.07 0.00 33.56 3.53
8863 17830 2.355756 CCGCCTGAGTATTGTGGAAATG 59.644 50.000 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 69 7.934457 AGCTTGTTTACTGCCATTATTATCTG 58.066 34.615 0.00 0.00 0.00 2.90
93 99 1.539157 CCTCTTGACCTTTTGAGGGC 58.461 55.000 0.00 0.00 41.59 5.19
104 110 5.412904 CCACCTTGATTTAAGACCTCTTGAC 59.587 44.000 0.00 0.00 38.76 3.18
166 172 5.471556 TTTGGTTCAGTTCGTGTAGGATA 57.528 39.130 0.00 0.00 0.00 2.59
252 258 2.171341 ACGAGCCTCTTTCACCTTTC 57.829 50.000 0.00 0.00 0.00 2.62
275 281 5.428457 TGATCTGCAAGGTTTAGGATAAGGA 59.572 40.000 0.00 0.00 0.00 3.36
365 373 3.845178 TCGTCGATGTGAGTGCTTTATT 58.155 40.909 4.21 0.00 0.00 1.40
367 375 3.179048 CATCGTCGATGTGAGTGCTTTA 58.821 45.455 24.11 0.00 35.54 1.85
370 378 0.179127 CCATCGTCGATGTGAGTGCT 60.179 55.000 28.46 0.00 38.28 4.40
1059 1080 4.074970 GGTGCTTTCTCTCATCTTTGGAA 58.925 43.478 0.00 0.00 0.00 3.53
1341 1371 2.752238 CTCGAGTCCAGGGCGACT 60.752 66.667 3.62 0.00 45.86 4.18
1506 1547 2.810852 GACCAGCTTCACTTTCTCCTTG 59.189 50.000 0.00 0.00 0.00 3.61
1617 2126 1.448922 CGTCATCGTCCTCCTCCTCC 61.449 65.000 0.00 0.00 0.00 4.30
1618 2127 0.464013 TCGTCATCGTCCTCCTCCTC 60.464 60.000 0.00 0.00 38.33 3.71
1619 2128 0.464735 CTCGTCATCGTCCTCCTCCT 60.465 60.000 0.00 0.00 38.33 3.69
1620 2129 1.448922 CCTCGTCATCGTCCTCCTCC 61.449 65.000 0.00 0.00 38.33 4.30
1621 2130 0.748729 ACCTCGTCATCGTCCTCCTC 60.749 60.000 0.00 0.00 38.33 3.71
1622 2131 1.032657 CACCTCGTCATCGTCCTCCT 61.033 60.000 0.00 0.00 38.33 3.69
1623 2132 1.030488 TCACCTCGTCATCGTCCTCC 61.030 60.000 0.00 0.00 38.33 4.30
1624 2133 0.099082 GTCACCTCGTCATCGTCCTC 59.901 60.000 0.00 0.00 38.33 3.71
1625 2134 1.645704 CGTCACCTCGTCATCGTCCT 61.646 60.000 0.00 0.00 38.33 3.85
1626 2135 1.226323 CGTCACCTCGTCATCGTCC 60.226 63.158 0.00 0.00 38.33 4.79
1627 2136 0.109873 AACGTCACCTCGTCATCGTC 60.110 55.000 0.00 0.00 43.38 4.20
1628 2137 0.313043 AAACGTCACCTCGTCATCGT 59.687 50.000 0.00 0.00 43.38 3.73
1629 2138 0.982673 GAAACGTCACCTCGTCATCG 59.017 55.000 0.00 0.00 43.38 3.84
1630 2139 1.347320 GGAAACGTCACCTCGTCATC 58.653 55.000 0.00 0.00 43.38 2.92
1631 2140 0.037605 GGGAAACGTCACCTCGTCAT 60.038 55.000 10.10 0.00 43.38 3.06
1681 2190 6.264292 TGCAACCTTTACAATAGCAGAGAAAA 59.736 34.615 0.00 0.00 0.00 2.29
1708 2217 3.378427 GCATAGGCGAAAATGGAGAAGTT 59.622 43.478 0.00 0.00 0.00 2.66
1885 2496 3.327757 AGTCTGTTGCCTTCATAGTTGGA 59.672 43.478 0.00 0.00 0.00 3.53
1900 2511 5.836024 TCCCCATAACTGTTAAGTCTGTT 57.164 39.130 4.11 0.00 34.77 3.16
1968 3872 4.058817 AGCTCCACGTTCTACAAGAAAAG 58.941 43.478 0.00 0.00 35.75 2.27
2490 4406 3.584834 ACGGAAATAACCAAAAGCATGC 58.415 40.909 10.51 10.51 0.00 4.06
2802 4804 4.258543 CGGACCTTAGACAATTTTGCCTA 58.741 43.478 0.00 0.00 0.00 3.93
2956 4958 9.770097 GTTCTTATTAGGAATGATCATCTGTCA 57.230 33.333 9.06 0.00 0.00 3.58
3158 5354 6.047870 TGATTTGCTCTTAGCTCTGATCTTC 58.952 40.000 0.00 0.00 42.97 2.87
3257 5454 4.949856 GGACATCACAGACCCATTACATTT 59.050 41.667 0.00 0.00 0.00 2.32
3288 5485 1.896660 GAGCCAAACGCAGGAACCA 60.897 57.895 0.00 0.00 41.38 3.67
3325 5522 1.289160 TTCCCCTCAGGTGGAATCAG 58.711 55.000 9.10 0.00 35.75 2.90
3326 5523 1.985622 ATTCCCCTCAGGTGGAATCA 58.014 50.000 16.89 0.00 45.99 2.57
3327 5524 4.019231 GGTATATTCCCCTCAGGTGGAATC 60.019 50.000 23.03 13.07 45.99 2.52
3329 5526 3.323775 GGTATATTCCCCTCAGGTGGAA 58.676 50.000 14.21 14.21 44.34 3.53
3330 5527 2.428783 GGGTATATTCCCCTCAGGTGGA 60.429 54.545 6.12 0.00 41.54 4.02
3331 5528 1.985895 GGGTATATTCCCCTCAGGTGG 59.014 57.143 6.12 0.00 41.54 4.61
3340 5537 1.209747 GCATCTCGGGGGTATATTCCC 59.790 57.143 8.91 8.91 46.31 3.97
3341 5538 1.134788 CGCATCTCGGGGGTATATTCC 60.135 57.143 0.00 0.00 33.78 3.01
3342 5539 2.295253 CGCATCTCGGGGGTATATTC 57.705 55.000 0.00 0.00 33.78 1.75
3766 7056 1.456296 GCATGGCAATGACAGTGAGA 58.544 50.000 4.87 0.00 35.67 3.27
3797 7087 0.741221 GTAGTGCAGAAAGAGGCGGG 60.741 60.000 0.00 0.00 0.00 6.13
4016 7360 0.318762 GGATAGAAGGAAGCGCCGAT 59.681 55.000 2.29 0.00 43.43 4.18
4141 7488 5.089970 TCAATGCTAATGCTGACAGTAGT 57.910 39.130 3.99 0.96 44.44 2.73
4281 7628 7.797038 AACGAAAAGAGCTAAAGAAACCTAA 57.203 32.000 0.00 0.00 0.00 2.69
4487 7835 3.740128 CTCGTCGGCCATTCCCAGG 62.740 68.421 2.24 0.00 0.00 4.45
4927 8606 3.270027 GGGCAAAACAAAGGGATAATGC 58.730 45.455 0.00 0.00 0.00 3.56
4928 8607 3.519107 AGGGGCAAAACAAAGGGATAATG 59.481 43.478 0.00 0.00 0.00 1.90
5165 8855 3.766676 TCTTCTTCGTCATCCTCTTCG 57.233 47.619 0.00 0.00 0.00 3.79
5206 8896 6.543465 ACCGTCATTGTCATTATCATTGTCAT 59.457 34.615 0.00 0.00 0.00 3.06
5207 8897 5.879777 ACCGTCATTGTCATTATCATTGTCA 59.120 36.000 0.00 0.00 0.00 3.58
5208 8898 6.037062 TCACCGTCATTGTCATTATCATTGTC 59.963 38.462 0.00 0.00 0.00 3.18
5209 8899 5.879777 TCACCGTCATTGTCATTATCATTGT 59.120 36.000 0.00 0.00 0.00 2.71
5210 8900 6.362210 TCACCGTCATTGTCATTATCATTG 57.638 37.500 0.00 0.00 0.00 2.82
5211 8901 6.767423 TCATCACCGTCATTGTCATTATCATT 59.233 34.615 0.00 0.00 0.00 2.57
5212 8902 6.290605 TCATCACCGTCATTGTCATTATCAT 58.709 36.000 0.00 0.00 0.00 2.45
5213 8903 5.669477 TCATCACCGTCATTGTCATTATCA 58.331 37.500 0.00 0.00 0.00 2.15
5214 8904 6.479990 TCTTCATCACCGTCATTGTCATTATC 59.520 38.462 0.00 0.00 0.00 1.75
5215 8905 6.258727 GTCTTCATCACCGTCATTGTCATTAT 59.741 38.462 0.00 0.00 0.00 1.28
5216 8906 5.580691 GTCTTCATCACCGTCATTGTCATTA 59.419 40.000 0.00 0.00 0.00 1.90
5217 8907 4.393062 GTCTTCATCACCGTCATTGTCATT 59.607 41.667 0.00 0.00 0.00 2.57
5266 8989 1.257415 CATGCTCATCTTCTTCGTCGC 59.743 52.381 0.00 0.00 0.00 5.19
5267 8990 2.533535 GTCATGCTCATCTTCTTCGTCG 59.466 50.000 0.00 0.00 0.00 5.12
5397 9121 3.310954 ACCCATCTCAGTTAGTCCCAGAT 60.311 47.826 0.00 0.00 0.00 2.90
5560 11616 8.954950 AGTTCATATAAAAGATGGACAGACAG 57.045 34.615 0.00 0.00 35.54 3.51
6187 15052 5.121380 AGGGTAGAAAATGCATGTCATCT 57.879 39.130 0.00 4.56 33.40 2.90
6250 15116 6.082707 GGGAGTAGAATGGAGGGAGTATTTA 58.917 44.000 0.00 0.00 0.00 1.40
6251 15117 4.908481 GGGAGTAGAATGGAGGGAGTATTT 59.092 45.833 0.00 0.00 0.00 1.40
6256 15122 2.604139 GAGGGAGTAGAATGGAGGGAG 58.396 57.143 0.00 0.00 0.00 4.30
6257 15123 1.220750 GGAGGGAGTAGAATGGAGGGA 59.779 57.143 0.00 0.00 0.00 4.20
6258 15124 1.723288 GGAGGGAGTAGAATGGAGGG 58.277 60.000 0.00 0.00 0.00 4.30
6259 15125 1.333177 CGGAGGGAGTAGAATGGAGG 58.667 60.000 0.00 0.00 0.00 4.30
6260 15126 2.074729 ACGGAGGGAGTAGAATGGAG 57.925 55.000 0.00 0.00 0.00 3.86
6262 15128 1.413077 GGAACGGAGGGAGTAGAATGG 59.587 57.143 0.00 0.00 0.00 3.16
6263 15129 2.389715 AGGAACGGAGGGAGTAGAATG 58.610 52.381 0.00 0.00 0.00 2.67
6266 15132 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
6267 15133 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
6268 15134 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
6269 15135 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
6270 15136 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
6291 15157 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
6295 15161 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
6299 15165 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
6301 15167 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
6302 15168 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
6303 15169 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
6305 15171 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
6306 15172 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
6308 15174 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
6310 15176 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
6312 15178 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
6313 15179 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
6314 15180 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
6315 15181 7.279536 CGTCTATATACATCCGTATGTGGTAGT 59.720 40.741 3.56 0.00 45.99 2.73
6316 15182 7.279536 ACGTCTATATACATCCGTATGTGGTAG 59.720 40.741 3.56 3.93 45.99 3.18
6317 15183 7.105588 ACGTCTATATACATCCGTATGTGGTA 58.894 38.462 3.56 0.00 45.99 3.25
6319 15185 6.432607 ACGTCTATATACATCCGTATGTGG 57.567 41.667 3.56 0.00 45.99 4.17
6320 15186 9.999009 AAATACGTCTATATACATCCGTATGTG 57.001 33.333 3.56 0.00 45.99 3.21
6337 15203 8.958506 AGTGAATCTACACTCTAAAATACGTCT 58.041 33.333 0.00 0.00 46.36 4.18
6351 15217 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
6352 15218 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
6353 15219 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
6354 15220 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
6356 15222 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
6358 15224 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
6360 15226 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
6361 15227 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
6364 15230 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
6365 15231 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
6366 15232 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
6367 15233 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
6369 15235 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
6370 15236 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
6371 15237 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
6372 15238 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
6373 15239 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
6374 15240 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
6375 15241 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
6378 15244 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
6379 15245 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
6381 15247 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
6382 15248 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
6384 15250 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
6385 15251 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
6401 15267 9.379791 CCTCCGTTACTAAATATTTGTCTTTCT 57.620 33.333 11.05 0.00 0.00 2.52
6402 15268 9.159364 ACCTCCGTTACTAAATATTTGTCTTTC 57.841 33.333 11.05 0.00 0.00 2.62
6405 15271 8.975295 ACTACCTCCGTTACTAAATATTTGTCT 58.025 33.333 11.05 0.00 0.00 3.41
6412 15278 9.189156 ACATTGTACTACCTCCGTTACTAAATA 57.811 33.333 0.00 0.00 0.00 1.40
6413 15279 8.071177 ACATTGTACTACCTCCGTTACTAAAT 57.929 34.615 0.00 0.00 0.00 1.40
6417 15283 6.094603 CACTACATTGTACTACCTCCGTTACT 59.905 42.308 0.00 0.00 0.00 2.24
6418 15284 6.261118 CACTACATTGTACTACCTCCGTTAC 58.739 44.000 0.00 0.00 0.00 2.50
6422 15288 3.703420 GCACTACATTGTACTACCTCCG 58.297 50.000 0.00 0.00 0.00 4.63
6423 15289 3.703420 CGCACTACATTGTACTACCTCC 58.297 50.000 0.00 0.00 0.00 4.30
6424 15290 3.114065 GCGCACTACATTGTACTACCTC 58.886 50.000 0.30 0.00 0.00 3.85
6425 15291 2.159142 GGCGCACTACATTGTACTACCT 60.159 50.000 10.83 0.00 0.00 3.08
6426 15292 2.199236 GGCGCACTACATTGTACTACC 58.801 52.381 10.83 0.00 0.00 3.18
6427 15293 2.199236 GGGCGCACTACATTGTACTAC 58.801 52.381 10.83 0.00 0.00 2.73
6428 15294 1.202325 CGGGCGCACTACATTGTACTA 60.202 52.381 8.62 0.00 0.00 1.82
6429 15295 0.459585 CGGGCGCACTACATTGTACT 60.460 55.000 8.62 0.00 0.00 2.73
6430 15296 0.738412 ACGGGCGCACTACATTGTAC 60.738 55.000 8.62 0.00 0.00 2.90
6431 15297 0.738063 CACGGGCGCACTACATTGTA 60.738 55.000 8.62 0.00 0.00 2.41
6433 15299 2.784596 CACGGGCGCACTACATTG 59.215 61.111 8.62 0.00 0.00 2.82
6445 15311 2.107141 GATCTCGGGAAGCACGGG 59.893 66.667 0.00 0.00 0.00 5.28
6446 15312 2.107141 GGATCTCGGGAAGCACGG 59.893 66.667 0.00 0.00 0.00 4.94
6447 15313 0.807667 CTTGGATCTCGGGAAGCACG 60.808 60.000 0.00 0.00 0.00 5.34
6449 15315 0.984230 AACTTGGATCTCGGGAAGCA 59.016 50.000 0.00 0.00 0.00 3.91
6450 15316 1.740025 CAAACTTGGATCTCGGGAAGC 59.260 52.381 0.00 0.00 0.00 3.86
6451 15317 3.003480 GTCAAACTTGGATCTCGGGAAG 58.997 50.000 0.00 0.00 0.00 3.46
6454 15320 1.739067 GGTCAAACTTGGATCTCGGG 58.261 55.000 0.00 0.00 0.00 5.14
6455 15321 1.337823 ACGGTCAAACTTGGATCTCGG 60.338 52.381 0.00 0.00 0.00 4.63
6456 15322 2.080286 ACGGTCAAACTTGGATCTCG 57.920 50.000 0.00 0.00 0.00 4.04
6457 15323 6.496338 AATTTACGGTCAAACTTGGATCTC 57.504 37.500 0.00 0.00 0.00 2.75
6459 15325 7.539710 GGTTAAATTTACGGTCAAACTTGGATC 59.460 37.037 0.00 0.00 0.00 3.36
6461 15327 6.320672 TGGTTAAATTTACGGTCAAACTTGGA 59.679 34.615 0.00 0.00 0.00 3.53
6463 15329 7.988904 TTGGTTAAATTTACGGTCAAACTTG 57.011 32.000 0.00 0.00 0.00 3.16
6466 15332 8.576936 TGAATTGGTTAAATTTACGGTCAAAC 57.423 30.769 0.00 0.00 38.64 2.93
6467 15333 8.414778 ACTGAATTGGTTAAATTTACGGTCAAA 58.585 29.630 0.00 0.00 38.64 2.69
6468 15334 7.863375 CACTGAATTGGTTAAATTTACGGTCAA 59.137 33.333 0.00 1.60 38.64 3.18
6469 15335 7.364200 CACTGAATTGGTTAAATTTACGGTCA 58.636 34.615 0.00 0.00 38.64 4.02
6470 15336 6.804783 CCACTGAATTGGTTAAATTTACGGTC 59.195 38.462 0.00 0.00 38.64 4.79
6471 15337 6.683715 CCACTGAATTGGTTAAATTTACGGT 58.316 36.000 0.00 0.00 38.64 4.83
6484 15350 7.492344 GGAGCAAAAATTATACCACTGAATTGG 59.508 37.037 0.00 0.00 43.04 3.16
6487 15353 6.183360 CGGGAGCAAAAATTATACCACTGAAT 60.183 38.462 0.00 0.00 0.00 2.57
6488 15354 5.124776 CGGGAGCAAAAATTATACCACTGAA 59.875 40.000 0.00 0.00 0.00 3.02
6489 15355 4.638421 CGGGAGCAAAAATTATACCACTGA 59.362 41.667 0.00 0.00 0.00 3.41
6490 15356 4.920376 CGGGAGCAAAAATTATACCACTG 58.080 43.478 0.00 0.00 0.00 3.66
6511 15377 1.597027 AAGGAAACCGACTGTGGCG 60.597 57.895 0.00 0.00 0.00 5.69
6512 15378 0.818040 ACAAGGAAACCGACTGTGGC 60.818 55.000 0.00 0.00 0.00 5.01
6513 15379 1.675552 AACAAGGAAACCGACTGTGG 58.324 50.000 0.00 0.00 0.00 4.17
6514 15380 4.886247 TTTAACAAGGAAACCGACTGTG 57.114 40.909 0.00 0.00 0.00 3.66
6515 15381 6.459670 AAATTTAACAAGGAAACCGACTGT 57.540 33.333 0.00 0.00 0.00 3.55
6516 15382 7.419204 TGTAAATTTAACAAGGAAACCGACTG 58.581 34.615 0.00 0.00 0.00 3.51
6517 15383 7.283807 ACTGTAAATTTAACAAGGAAACCGACT 59.716 33.333 0.00 0.00 0.00 4.18
6518 15384 7.420002 ACTGTAAATTTAACAAGGAAACCGAC 58.580 34.615 0.00 0.00 0.00 4.79
6519 15385 7.282675 TGACTGTAAATTTAACAAGGAAACCGA 59.717 33.333 0.00 0.00 0.00 4.69
6520 15386 7.419204 TGACTGTAAATTTAACAAGGAAACCG 58.581 34.615 0.00 0.00 0.00 4.44
6521 15387 9.589111 TTTGACTGTAAATTTAACAAGGAAACC 57.411 29.630 0.00 0.00 0.00 3.27
6525 15391 9.796120 CAAGTTTGACTGTAAATTTAACAAGGA 57.204 29.630 0.00 0.00 0.00 3.36
6526 15392 9.796120 TCAAGTTTGACTGTAAATTTAACAAGG 57.204 29.630 0.00 0.00 31.01 3.61
6533 15399 8.076178 CCGAGATTCAAGTTTGACTGTAAATTT 58.924 33.333 0.00 0.00 36.83 1.82
6534 15400 7.308589 CCCGAGATTCAAGTTTGACTGTAAATT 60.309 37.037 0.00 0.00 36.83 1.82
6535 15401 6.149474 CCCGAGATTCAAGTTTGACTGTAAAT 59.851 38.462 0.00 0.00 36.83 1.40
6536 15402 5.468746 CCCGAGATTCAAGTTTGACTGTAAA 59.531 40.000 0.00 0.00 36.83 2.01
6537 15403 4.994852 CCCGAGATTCAAGTTTGACTGTAA 59.005 41.667 0.00 0.00 36.83 2.41
6538 15404 4.282449 TCCCGAGATTCAAGTTTGACTGTA 59.718 41.667 0.00 0.00 36.83 2.74
6539 15405 3.071023 TCCCGAGATTCAAGTTTGACTGT 59.929 43.478 0.00 0.00 36.83 3.55
6540 15406 3.664107 TCCCGAGATTCAAGTTTGACTG 58.336 45.455 0.00 0.00 36.83 3.51
6541 15407 4.319177 CTTCCCGAGATTCAAGTTTGACT 58.681 43.478 0.00 0.00 36.83 3.41
6542 15408 3.120165 GCTTCCCGAGATTCAAGTTTGAC 60.120 47.826 0.00 0.00 36.83 3.18
6543 15409 3.074412 GCTTCCCGAGATTCAAGTTTGA 58.926 45.455 0.00 0.00 34.92 2.69
6544 15410 2.159653 CGCTTCCCGAGATTCAAGTTTG 60.160 50.000 0.00 0.00 40.02 2.93
6545 15411 2.076863 CGCTTCCCGAGATTCAAGTTT 58.923 47.619 0.00 0.00 40.02 2.66
6546 15412 1.726853 CGCTTCCCGAGATTCAAGTT 58.273 50.000 0.00 0.00 40.02 2.66
6547 15413 0.741221 GCGCTTCCCGAGATTCAAGT 60.741 55.000 0.00 0.00 40.02 3.16
6548 15414 1.756375 CGCGCTTCCCGAGATTCAAG 61.756 60.000 5.56 0.00 39.21 3.02
6549 15415 1.809619 CGCGCTTCCCGAGATTCAA 60.810 57.895 5.56 0.00 39.21 2.69
6550 15416 2.202743 CGCGCTTCCCGAGATTCA 60.203 61.111 5.56 0.00 39.21 2.57
6551 15417 2.104331 TCGCGCTTCCCGAGATTC 59.896 61.111 5.56 0.00 40.85 2.52
6556 15422 4.673298 TTTGCTCGCGCTTCCCGA 62.673 61.111 5.56 0.00 40.02 5.14
6557 15423 4.445545 GTTTGCTCGCGCTTCCCG 62.446 66.667 5.56 0.00 40.75 5.14
6558 15424 1.740296 TAGTTTGCTCGCGCTTCCC 60.740 57.895 5.56 0.00 36.97 3.97
6559 15425 1.289109 TGTAGTTTGCTCGCGCTTCC 61.289 55.000 5.56 0.00 36.97 3.46
6560 15426 0.721718 ATGTAGTTTGCTCGCGCTTC 59.278 50.000 5.56 0.00 36.97 3.86
6561 15427 1.135972 CAATGTAGTTTGCTCGCGCTT 60.136 47.619 5.56 0.00 36.97 4.68
6562 15428 0.443869 CAATGTAGTTTGCTCGCGCT 59.556 50.000 5.56 0.00 36.97 5.92
6563 15429 0.165944 ACAATGTAGTTTGCTCGCGC 59.834 50.000 0.00 0.00 0.00 6.86
6564 15430 1.464023 CCACAATGTAGTTTGCTCGCG 60.464 52.381 0.00 0.00 0.00 5.87
6565 15431 1.804151 TCCACAATGTAGTTTGCTCGC 59.196 47.619 0.00 0.00 0.00 5.03
6566 15432 4.154015 TCATTCCACAATGTAGTTTGCTCG 59.846 41.667 0.00 0.00 40.47 5.03
6567 15433 5.627499 TCATTCCACAATGTAGTTTGCTC 57.373 39.130 0.00 0.00 40.47 4.26
6568 15434 5.047802 CCTTCATTCCACAATGTAGTTTGCT 60.048 40.000 0.00 0.00 40.47 3.91
6569 15435 5.163513 CCTTCATTCCACAATGTAGTTTGC 58.836 41.667 0.00 0.00 40.47 3.68
6570 15436 5.476599 TCCCTTCATTCCACAATGTAGTTTG 59.523 40.000 0.00 0.00 40.47 2.93
6571 15437 5.640147 TCCCTTCATTCCACAATGTAGTTT 58.360 37.500 0.00 0.00 40.47 2.66
6572 15438 5.222130 ACTCCCTTCATTCCACAATGTAGTT 60.222 40.000 0.00 0.00 40.47 2.24
6573 15439 4.289672 ACTCCCTTCATTCCACAATGTAGT 59.710 41.667 0.00 0.00 40.47 2.73
6574 15440 4.848357 ACTCCCTTCATTCCACAATGTAG 58.152 43.478 0.00 0.00 40.47 2.74
6575 15441 4.927267 ACTCCCTTCATTCCACAATGTA 57.073 40.909 0.00 0.00 40.47 2.29
6576 15442 3.814504 ACTCCCTTCATTCCACAATGT 57.185 42.857 0.00 0.00 40.47 2.71
6577 15443 7.056635 ACTTATACTCCCTTCATTCCACAATG 58.943 38.462 0.00 0.00 40.91 2.82
6578 15444 7.127955 AGACTTATACTCCCTTCATTCCACAAT 59.872 37.037 0.00 0.00 0.00 2.71
6579 15445 6.443849 AGACTTATACTCCCTTCATTCCACAA 59.556 38.462 0.00 0.00 0.00 3.33
6580 15446 5.964477 AGACTTATACTCCCTTCATTCCACA 59.036 40.000 0.00 0.00 0.00 4.17
6581 15447 6.487299 AGACTTATACTCCCTTCATTCCAC 57.513 41.667 0.00 0.00 0.00 4.02
6582 15448 7.510675 AAAGACTTATACTCCCTTCATTCCA 57.489 36.000 0.00 0.00 0.00 3.53
6583 15449 8.809468 AAAAAGACTTATACTCCCTTCATTCC 57.191 34.615 0.00 0.00 0.00 3.01
6610 15476 7.065803 CGTATGTGGTAGTCCATTTGAAATCTT 59.934 37.037 0.00 0.00 46.20 2.40
6659 15525 5.412594 GGAGCAAAATGAGTGAATCTACACA 59.587 40.000 0.00 0.00 42.45 3.72
6683 15549 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
6865 15750 3.977579 CGTCACCAGAATCATCTACATCG 59.022 47.826 0.00 0.00 33.50 3.84
7273 16188 2.084546 GGTTCGAAATGTTCCTCTGGG 58.915 52.381 0.00 0.00 0.00 4.45
7528 16452 4.536765 GATGGGTAAATGAAGGTGATGGT 58.463 43.478 0.00 0.00 0.00 3.55
7572 16504 7.611467 TCAGAATCAATTACAGTAATGCAGGTT 59.389 33.333 6.57 3.27 0.00 3.50
7594 16527 7.038302 ACTCCTATACAAAACCATTCAGTCAGA 60.038 37.037 0.00 0.00 0.00 3.27
7614 16549 1.336517 CGTTTGAAGTCGGCACTCCTA 60.337 52.381 0.00 0.00 29.93 2.94
7667 16608 5.013704 ACAGGTGGTTCACTATCCAATGTAA 59.986 40.000 0.00 0.00 35.54 2.41
7668 16609 4.534500 ACAGGTGGTTCACTATCCAATGTA 59.466 41.667 0.00 0.00 35.54 2.29
7874 16818 3.243724 AGGAGTATATCAGGCCAAGACC 58.756 50.000 5.01 0.00 0.00 3.85
7891 16835 7.468357 GCATTTTCATCAGGAAAGTCATAGGAG 60.468 40.741 0.00 0.00 45.70 3.69
7898 16842 4.704057 AGAGGCATTTTCATCAGGAAAGTC 59.296 41.667 0.00 0.00 45.70 3.01
7899 16843 4.461781 CAGAGGCATTTTCATCAGGAAAGT 59.538 41.667 0.00 0.00 45.70 2.66
7929 16873 6.913170 TCATCAAACCTTCAAACTATTCTGC 58.087 36.000 0.00 0.00 0.00 4.26
8025 16969 1.485066 GCTGAGGAAATCTTCGGGGTA 59.515 52.381 3.87 0.00 0.00 3.69
8026 16970 0.253327 GCTGAGGAAATCTTCGGGGT 59.747 55.000 3.87 0.00 0.00 4.95
8030 16974 1.661112 GAACGGCTGAGGAAATCTTCG 59.339 52.381 0.00 0.00 0.00 3.79
8039 16983 1.236616 TTGCACATGAACGGCTGAGG 61.237 55.000 0.00 0.00 0.00 3.86
8060 17004 0.603439 CAACCCTTGCAAACATGCCC 60.603 55.000 0.00 0.00 0.00 5.36
8167 17112 4.771356 CAGCGTGCACATGGCTGC 62.771 66.667 25.45 16.09 46.39 5.25
8193 17138 7.963532 TGGAAGATACTTGGATTCCACTATAC 58.036 38.462 4.45 0.00 44.75 1.47
8200 17145 4.884164 CACCTTGGAAGATACTTGGATTCC 59.116 45.833 0.00 0.00 41.34 3.01
8203 17148 4.111577 TCCACCTTGGAAGATACTTGGAT 58.888 43.478 0.00 0.00 45.00 3.41
8240 17185 2.792290 CGCCGCGTCTGTTGAGATG 61.792 63.158 4.92 0.00 38.16 2.90
8241 17186 2.507102 CGCCGCGTCTGTTGAGAT 60.507 61.111 4.92 0.00 0.00 2.75
8268 17213 3.304391 GCGGCCAATATATCGCTGAAAAA 60.304 43.478 14.74 0.00 44.10 1.94
8269 17214 2.225491 GCGGCCAATATATCGCTGAAAA 59.775 45.455 14.74 0.00 44.10 2.29
8270 17215 1.804151 GCGGCCAATATATCGCTGAAA 59.196 47.619 14.74 0.00 44.10 2.69
8271 17216 1.438651 GCGGCCAATATATCGCTGAA 58.561 50.000 14.74 0.00 44.10 3.02
8272 17217 0.391130 GGCGGCCAATATATCGCTGA 60.391 55.000 15.62 0.00 46.31 4.26
8273 17218 1.695893 CGGCGGCCAATATATCGCTG 61.696 60.000 20.71 12.04 46.31 5.18
8274 17219 1.447838 CGGCGGCCAATATATCGCT 60.448 57.895 20.71 0.00 46.31 4.93
8277 17222 1.338769 ACCTTCGGCGGCCAATATATC 60.339 52.381 20.71 0.00 0.00 1.63
8293 17238 1.376037 GCCTGCTGAACGCTACCTT 60.376 57.895 0.00 0.00 40.11 3.50
8314 17260 4.025979 GTGCTAGACGCGCTGTAATTTAAT 60.026 41.667 5.73 0.00 45.56 1.40
8315 17261 3.305094 GTGCTAGACGCGCTGTAATTTAA 59.695 43.478 5.73 0.00 45.56 1.52
8363 17314 5.725110 ATGTATGCTTGATCTTGTTCGTC 57.275 39.130 0.00 0.00 0.00 4.20
8366 17317 9.624697 TTGTTTTATGTATGCTTGATCTTGTTC 57.375 29.630 0.00 0.00 0.00 3.18
8528 17492 0.629596 AGTCGAGGAGTGGGGTCATA 59.370 55.000 0.00 0.00 0.00 2.15
8598 17563 2.006888 GTAGCACGCTTTATTGCCTCA 58.993 47.619 0.00 0.00 39.75 3.86
8613 17578 0.690762 GAAGGGTTGTGAGGGTAGCA 59.309 55.000 0.00 0.00 0.00 3.49
8616 17581 1.652947 GGAGAAGGGTTGTGAGGGTA 58.347 55.000 0.00 0.00 0.00 3.69
8668 17633 7.971168 AGTGTGACAAGATTTAGACTATTCTCG 59.029 37.037 0.00 0.00 32.75 4.04
8688 17653 7.357429 ACATGATCATCTAGAATGAGTGTGA 57.643 36.000 4.86 0.99 0.00 3.58
8772 17739 5.733620 TTTACTATTGTGAGAGAACCGGT 57.266 39.130 0.00 0.00 0.00 5.28
8778 17745 7.334421 GCAAGTCCAATTTACTATTGTGAGAGA 59.666 37.037 0.00 0.00 0.00 3.10
8791 17758 5.815233 TGGGATTTTGCAAGTCCAATTTA 57.185 34.783 25.35 10.18 33.62 1.40
8799 17766 3.389002 AGAGCTTTTGGGATTTTGCAAGT 59.611 39.130 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.