Multiple sequence alignment - TraesCS2D01G223400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G223400 chr2D 100.000 3070 0 0 1 3070 190356075 190353006 0.000000e+00 5670.0
1 TraesCS2D01G223400 chr2D 97.512 402 10 0 30 431 190361563 190361162 0.000000e+00 688.0
2 TraesCS2D01G223400 chr2A 95.986 2616 93 8 459 3069 204886859 204884251 0.000000e+00 4239.0
3 TraesCS2D01G223400 chr2A 97.778 45 1 0 429 473 204886926 204886882 9.130000e-11 78.7
4 TraesCS2D01G223400 chr2B 94.088 1962 98 8 429 2372 247390922 247388961 0.000000e+00 2964.0
5 TraesCS2D01G223400 chr2B 89.047 703 59 6 2384 3068 247388896 247388194 0.000000e+00 856.0
6 TraesCS2D01G223400 chr4D 88.916 415 38 7 21 431 350259898 350259488 3.530000e-139 505.0
7 TraesCS2D01G223400 chr5A 88.366 404 40 5 33 431 22207204 22206803 2.140000e-131 479.0
8 TraesCS2D01G223400 chr5A 87.626 396 40 5 1 391 22202040 22201649 4.670000e-123 451.0
9 TraesCS2D01G223400 chr7A 87.531 409 39 11 30 431 127078473 127078876 2.160000e-126 462.0
10 TraesCS2D01G223400 chr7A 86.957 414 47 5 23 431 127083946 127084357 2.790000e-125 459.0
11 TraesCS2D01G223400 chr3B 86.533 349 42 4 30 374 348115752 348115405 2.230000e-101 379.0
12 TraesCS2D01G223400 chr3A 85.399 363 45 8 30 388 505709184 505709542 1.340000e-98 370.0
13 TraesCS2D01G223400 chr3A 85.067 375 42 12 21 388 505714655 505715022 1.340000e-98 370.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G223400 chr2D 190353006 190356075 3069 True 5670.00 5670 100.0000 1 3070 1 chr2D.!!$R1 3069
1 TraesCS2D01G223400 chr2A 204884251 204886926 2675 True 2158.85 4239 96.8820 429 3069 2 chr2A.!!$R1 2640
2 TraesCS2D01G223400 chr2B 247388194 247390922 2728 True 1910.00 2964 91.5675 429 3068 2 chr2B.!!$R1 2639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 328 0.034767 GGGTGTAAACCCTAGCCACC 60.035 60.0 14.64 0.0 46.39 4.61 F
386 387 0.035247 ACCCTAGTTCGACGCTCTCT 60.035 55.0 0.00 0.0 0.00 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 1908 1.271054 ACATCAGTGCCAACCTGAGAC 60.271 52.381 0.0 0.0 41.91 3.36 R
2089 2137 3.906720 ACCAGTAGTCACACACTTTGT 57.093 42.857 0.0 0.0 39.97 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.890174 GCTCGGTTTCAATTGGGGG 59.110 57.895 5.42 0.00 0.00 5.40
39 40 2.307153 GGGGGTATTGTCAGGCTCA 58.693 57.895 0.00 0.00 0.00 4.26
40 41 0.181350 GGGGGTATTGTCAGGCTCAG 59.819 60.000 0.00 0.00 0.00 3.35
41 42 0.912486 GGGGTATTGTCAGGCTCAGT 59.088 55.000 0.00 0.00 0.00 3.41
42 43 1.282157 GGGGTATTGTCAGGCTCAGTT 59.718 52.381 0.00 0.00 0.00 3.16
43 44 2.633488 GGGTATTGTCAGGCTCAGTTC 58.367 52.381 0.00 0.00 0.00 3.01
44 45 2.237392 GGGTATTGTCAGGCTCAGTTCT 59.763 50.000 0.00 0.00 0.00 3.01
45 46 3.307762 GGGTATTGTCAGGCTCAGTTCTT 60.308 47.826 0.00 0.00 0.00 2.52
46 47 4.081087 GGGTATTGTCAGGCTCAGTTCTTA 60.081 45.833 0.00 0.00 0.00 2.10
47 48 5.396884 GGGTATTGTCAGGCTCAGTTCTTAT 60.397 44.000 0.00 0.00 0.00 1.73
48 49 5.755861 GGTATTGTCAGGCTCAGTTCTTATC 59.244 44.000 0.00 0.00 0.00 1.75
49 50 4.890158 TTGTCAGGCTCAGTTCTTATCA 57.110 40.909 0.00 0.00 0.00 2.15
50 51 5.426689 TTGTCAGGCTCAGTTCTTATCAT 57.573 39.130 0.00 0.00 0.00 2.45
51 52 5.426689 TGTCAGGCTCAGTTCTTATCATT 57.573 39.130 0.00 0.00 0.00 2.57
52 53 5.423015 TGTCAGGCTCAGTTCTTATCATTC 58.577 41.667 0.00 0.00 0.00 2.67
53 54 4.813697 GTCAGGCTCAGTTCTTATCATTCC 59.186 45.833 0.00 0.00 0.00 3.01
54 55 4.133078 CAGGCTCAGTTCTTATCATTCCC 58.867 47.826 0.00 0.00 0.00 3.97
55 56 3.137360 AGGCTCAGTTCTTATCATTCCCC 59.863 47.826 0.00 0.00 0.00 4.81
56 57 3.137360 GGCTCAGTTCTTATCATTCCCCT 59.863 47.826 0.00 0.00 0.00 4.79
57 58 4.133078 GCTCAGTTCTTATCATTCCCCTG 58.867 47.826 0.00 0.00 0.00 4.45
58 59 4.384647 GCTCAGTTCTTATCATTCCCCTGT 60.385 45.833 0.00 0.00 0.00 4.00
59 60 5.359194 TCAGTTCTTATCATTCCCCTGTC 57.641 43.478 0.00 0.00 0.00 3.51
60 61 4.164221 TCAGTTCTTATCATTCCCCTGTCC 59.836 45.833 0.00 0.00 0.00 4.02
61 62 4.080356 CAGTTCTTATCATTCCCCTGTCCA 60.080 45.833 0.00 0.00 0.00 4.02
62 63 4.164988 AGTTCTTATCATTCCCCTGTCCAG 59.835 45.833 0.00 0.00 0.00 3.86
63 64 2.439507 TCTTATCATTCCCCTGTCCAGC 59.560 50.000 0.00 0.00 0.00 4.85
64 65 0.758734 TATCATTCCCCTGTCCAGCG 59.241 55.000 0.00 0.00 0.00 5.18
65 66 1.274703 ATCATTCCCCTGTCCAGCGT 61.275 55.000 0.00 0.00 0.00 5.07
66 67 1.746615 CATTCCCCTGTCCAGCGTG 60.747 63.158 0.00 0.00 0.00 5.34
67 68 3.628646 ATTCCCCTGTCCAGCGTGC 62.629 63.158 0.00 0.00 0.00 5.34
72 73 4.680237 CTGTCCAGCGTGCCGGAA 62.680 66.667 5.05 0.00 31.67 4.30
73 74 4.680237 TGTCCAGCGTGCCGGAAG 62.680 66.667 5.05 0.00 31.67 3.46
74 75 4.373116 GTCCAGCGTGCCGGAAGA 62.373 66.667 5.05 0.00 31.67 2.87
75 76 4.373116 TCCAGCGTGCCGGAAGAC 62.373 66.667 5.05 0.00 0.00 3.01
76 77 4.379243 CCAGCGTGCCGGAAGACT 62.379 66.667 5.05 0.00 0.00 3.24
77 78 2.811317 CAGCGTGCCGGAAGACTC 60.811 66.667 5.05 0.00 0.00 3.36
78 79 3.303135 AGCGTGCCGGAAGACTCA 61.303 61.111 5.05 0.00 0.00 3.41
79 80 2.811317 GCGTGCCGGAAGACTCAG 60.811 66.667 5.05 0.00 0.00 3.35
80 81 2.651361 CGTGCCGGAAGACTCAGT 59.349 61.111 5.05 0.00 0.00 3.41
81 82 1.880894 CGTGCCGGAAGACTCAGTA 59.119 57.895 5.05 0.00 0.00 2.74
82 83 0.179161 CGTGCCGGAAGACTCAGTAG 60.179 60.000 5.05 0.00 0.00 2.57
83 84 0.458716 GTGCCGGAAGACTCAGTAGC 60.459 60.000 5.05 0.00 0.00 3.58
84 85 1.142097 GCCGGAAGACTCAGTAGCC 59.858 63.158 5.05 0.00 0.00 3.93
85 86 1.433879 CCGGAAGACTCAGTAGCCG 59.566 63.158 0.00 5.67 38.54 5.52
86 87 1.313812 CCGGAAGACTCAGTAGCCGT 61.314 60.000 0.00 0.00 37.21 5.68
87 88 1.376543 CGGAAGACTCAGTAGCCGTA 58.623 55.000 4.69 0.00 34.45 4.02
88 89 1.331138 CGGAAGACTCAGTAGCCGTAG 59.669 57.143 4.69 0.00 34.45 3.51
89 90 2.641305 GGAAGACTCAGTAGCCGTAGA 58.359 52.381 0.00 0.00 0.00 2.59
90 91 3.215975 GGAAGACTCAGTAGCCGTAGAT 58.784 50.000 0.00 0.00 0.00 1.98
91 92 3.251487 GGAAGACTCAGTAGCCGTAGATC 59.749 52.174 0.00 0.00 0.00 2.75
92 93 3.849563 AGACTCAGTAGCCGTAGATCT 57.150 47.619 0.00 0.00 0.00 2.75
93 94 3.472652 AGACTCAGTAGCCGTAGATCTG 58.527 50.000 5.18 0.00 0.00 2.90
94 95 3.118186 AGACTCAGTAGCCGTAGATCTGT 60.118 47.826 5.18 0.00 0.00 3.41
95 96 3.207778 ACTCAGTAGCCGTAGATCTGTC 58.792 50.000 5.18 0.00 0.00 3.51
96 97 3.206964 CTCAGTAGCCGTAGATCTGTCA 58.793 50.000 5.18 0.00 0.00 3.58
97 98 3.818210 CTCAGTAGCCGTAGATCTGTCAT 59.182 47.826 5.18 0.00 0.00 3.06
98 99 3.815962 TCAGTAGCCGTAGATCTGTCATC 59.184 47.826 5.18 0.00 0.00 2.92
99 100 2.809119 AGTAGCCGTAGATCTGTCATCG 59.191 50.000 5.18 2.69 0.00 3.84
100 101 1.681538 AGCCGTAGATCTGTCATCGT 58.318 50.000 5.18 0.00 0.00 3.73
101 102 1.335182 AGCCGTAGATCTGTCATCGTG 59.665 52.381 5.18 0.00 0.00 4.35
102 103 1.065701 GCCGTAGATCTGTCATCGTGT 59.934 52.381 5.18 0.00 0.00 4.49
103 104 2.720933 CCGTAGATCTGTCATCGTGTG 58.279 52.381 5.18 0.00 0.00 3.82
104 105 2.541794 CCGTAGATCTGTCATCGTGTGG 60.542 54.545 5.18 0.00 0.00 4.17
105 106 2.464865 GTAGATCTGTCATCGTGTGGC 58.535 52.381 5.18 0.00 0.00 5.01
106 107 1.189752 AGATCTGTCATCGTGTGGCT 58.810 50.000 0.00 0.00 32.24 4.75
107 108 1.135915 AGATCTGTCATCGTGTGGCTC 59.864 52.381 0.00 0.00 32.24 4.70
108 109 1.135915 GATCTGTCATCGTGTGGCTCT 59.864 52.381 0.00 0.00 32.24 4.09
109 110 0.244721 TCTGTCATCGTGTGGCTCTG 59.755 55.000 0.00 0.00 32.24 3.35
110 111 0.738762 CTGTCATCGTGTGGCTCTGG 60.739 60.000 0.00 0.00 32.24 3.86
111 112 1.184970 TGTCATCGTGTGGCTCTGGA 61.185 55.000 0.00 0.00 32.24 3.86
112 113 0.459237 GTCATCGTGTGGCTCTGGAG 60.459 60.000 0.00 0.00 0.00 3.86
123 124 1.482278 GCTCTGGAGCGAAGATAACG 58.518 55.000 6.84 0.00 45.29 3.18
124 125 1.866063 GCTCTGGAGCGAAGATAACGG 60.866 57.143 6.84 0.00 45.29 4.44
125 126 1.405821 CTCTGGAGCGAAGATAACGGT 59.594 52.381 0.00 0.00 43.87 4.83
126 127 1.822990 TCTGGAGCGAAGATAACGGTT 59.177 47.619 0.00 0.00 41.38 4.44
127 128 2.159282 TCTGGAGCGAAGATAACGGTTC 60.159 50.000 0.00 0.00 41.38 3.62
128 129 1.197910 GGAGCGAAGATAACGGTTCG 58.802 55.000 0.00 0.00 46.60 3.95
129 130 1.202222 GGAGCGAAGATAACGGTTCGA 60.202 52.381 8.56 0.00 46.78 3.71
130 131 2.543238 GGAGCGAAGATAACGGTTCGAT 60.543 50.000 8.56 1.64 46.64 3.59
131 132 2.728922 AGCGAAGATAACGGTTCGATC 58.271 47.619 8.56 0.00 46.78 3.69
132 133 2.098607 AGCGAAGATAACGGTTCGATCA 59.901 45.455 8.56 0.00 46.78 2.92
133 134 2.855963 GCGAAGATAACGGTTCGATCAA 59.144 45.455 8.56 0.00 46.78 2.57
134 135 3.061139 GCGAAGATAACGGTTCGATCAAG 60.061 47.826 8.56 0.00 46.78 3.02
135 136 4.103357 CGAAGATAACGGTTCGATCAAGT 58.897 43.478 0.00 0.00 46.78 3.16
136 137 4.027621 CGAAGATAACGGTTCGATCAAGTG 60.028 45.833 0.00 0.00 46.78 3.16
137 138 3.782046 AGATAACGGTTCGATCAAGTGG 58.218 45.455 0.00 0.00 0.00 4.00
138 139 2.373540 TAACGGTTCGATCAAGTGGG 57.626 50.000 0.00 0.00 0.00 4.61
139 140 0.953960 AACGGTTCGATCAAGTGGGC 60.954 55.000 0.00 0.00 0.00 5.36
140 141 1.375396 CGGTTCGATCAAGTGGGCA 60.375 57.895 0.00 0.00 0.00 5.36
141 142 1.361668 CGGTTCGATCAAGTGGGCAG 61.362 60.000 0.00 0.00 0.00 4.85
142 143 1.648467 GGTTCGATCAAGTGGGCAGC 61.648 60.000 0.00 0.00 0.00 5.25
143 144 0.674895 GTTCGATCAAGTGGGCAGCT 60.675 55.000 0.00 0.00 0.00 4.24
144 145 0.391661 TTCGATCAAGTGGGCAGCTC 60.392 55.000 0.00 0.00 0.00 4.09
145 146 1.220206 CGATCAAGTGGGCAGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
146 147 0.809241 CGATCAAGTGGGCAGCTCTC 60.809 60.000 0.00 0.00 0.00 3.20
147 148 0.463474 GATCAAGTGGGCAGCTCTCC 60.463 60.000 0.00 0.00 0.00 3.71
148 149 0.913451 ATCAAGTGGGCAGCTCTCCT 60.913 55.000 0.00 0.00 0.00 3.69
149 150 1.078567 CAAGTGGGCAGCTCTCCTC 60.079 63.158 0.00 0.59 0.00 3.71
150 151 2.297129 AAGTGGGCAGCTCTCCTCC 61.297 63.158 0.00 0.00 0.00 4.30
151 152 4.154347 GTGGGCAGCTCTCCTCCG 62.154 72.222 0.00 0.00 0.00 4.63
152 153 4.704103 TGGGCAGCTCTCCTCCGT 62.704 66.667 0.00 0.00 0.00 4.69
153 154 3.844090 GGGCAGCTCTCCTCCGTC 61.844 72.222 0.00 0.00 0.00 4.79
154 155 4.200283 GGCAGCTCTCCTCCGTCG 62.200 72.222 0.00 0.00 0.00 5.12
155 156 3.134792 GCAGCTCTCCTCCGTCGA 61.135 66.667 0.00 0.00 0.00 4.20
156 157 2.485795 GCAGCTCTCCTCCGTCGAT 61.486 63.158 0.00 0.00 0.00 3.59
157 158 1.652012 CAGCTCTCCTCCGTCGATC 59.348 63.158 0.00 0.00 0.00 3.69
158 159 0.817634 CAGCTCTCCTCCGTCGATCT 60.818 60.000 0.00 0.00 0.00 2.75
159 160 0.817634 AGCTCTCCTCCGTCGATCTG 60.818 60.000 0.00 0.00 0.00 2.90
160 161 1.652012 CTCTCCTCCGTCGATCTGC 59.348 63.158 0.00 0.00 0.00 4.26
161 162 1.791103 CTCTCCTCCGTCGATCTGCC 61.791 65.000 0.00 0.00 0.00 4.85
162 163 2.044352 TCCTCCGTCGATCTGCCA 60.044 61.111 0.00 0.00 0.00 4.92
163 164 1.455773 TCCTCCGTCGATCTGCCAT 60.456 57.895 0.00 0.00 0.00 4.40
164 165 1.006805 CCTCCGTCGATCTGCCATC 60.007 63.158 0.00 0.00 0.00 3.51
165 166 1.006805 CTCCGTCGATCTGCCATCC 60.007 63.158 0.00 0.00 0.00 3.51
166 167 1.738346 CTCCGTCGATCTGCCATCCA 61.738 60.000 0.00 0.00 0.00 3.41
167 168 1.143838 CCGTCGATCTGCCATCCAA 59.856 57.895 0.00 0.00 0.00 3.53
168 169 0.877649 CCGTCGATCTGCCATCCAAG 60.878 60.000 0.00 0.00 0.00 3.61
169 170 0.877649 CGTCGATCTGCCATCCAAGG 60.878 60.000 0.00 0.00 0.00 3.61
170 171 0.533755 GTCGATCTGCCATCCAAGGG 60.534 60.000 0.00 0.00 0.00 3.95
171 172 0.982852 TCGATCTGCCATCCAAGGGT 60.983 55.000 0.00 0.00 0.00 4.34
172 173 0.816825 CGATCTGCCATCCAAGGGTG 60.817 60.000 0.00 0.00 0.00 4.61
174 175 1.941403 ATCTGCCATCCAAGGGTGGG 61.941 60.000 19.65 4.53 46.01 4.61
175 176 2.863484 TGCCATCCAAGGGTGGGT 60.863 61.111 19.65 0.00 46.01 4.51
180 181 1.307647 ATCCAAGGGTGGGTGATGC 59.692 57.895 0.00 0.00 46.01 3.91
181 182 1.217057 ATCCAAGGGTGGGTGATGCT 61.217 55.000 0.00 0.00 46.01 3.79
182 183 0.548926 TCCAAGGGTGGGTGATGCTA 60.549 55.000 0.00 0.00 46.01 3.49
183 184 0.107017 CCAAGGGTGGGTGATGCTAG 60.107 60.000 0.00 0.00 41.77 3.42
184 185 0.620556 CAAGGGTGGGTGATGCTAGT 59.379 55.000 0.00 0.00 0.00 2.57
185 186 0.620556 AAGGGTGGGTGATGCTAGTG 59.379 55.000 0.00 0.00 0.00 2.74
186 187 0.252696 AGGGTGGGTGATGCTAGTGA 60.253 55.000 0.00 0.00 0.00 3.41
187 188 0.107654 GGGTGGGTGATGCTAGTGAC 60.108 60.000 0.00 0.00 0.00 3.67
188 189 0.905357 GGTGGGTGATGCTAGTGACT 59.095 55.000 0.00 0.00 0.00 3.41
189 190 1.279271 GGTGGGTGATGCTAGTGACTT 59.721 52.381 0.00 0.00 0.00 3.01
190 191 2.500098 GGTGGGTGATGCTAGTGACTTA 59.500 50.000 0.00 0.00 0.00 2.24
191 192 3.055385 GGTGGGTGATGCTAGTGACTTAA 60.055 47.826 0.00 0.00 0.00 1.85
192 193 3.933332 GTGGGTGATGCTAGTGACTTAAC 59.067 47.826 0.00 0.00 0.00 2.01
193 194 3.838317 TGGGTGATGCTAGTGACTTAACT 59.162 43.478 0.00 0.00 0.00 2.24
194 195 4.184629 GGGTGATGCTAGTGACTTAACTG 58.815 47.826 0.00 0.00 0.00 3.16
195 196 4.322801 GGGTGATGCTAGTGACTTAACTGT 60.323 45.833 0.00 0.00 0.00 3.55
196 197 5.105473 GGGTGATGCTAGTGACTTAACTGTA 60.105 44.000 0.00 0.00 0.00 2.74
197 198 6.037098 GGTGATGCTAGTGACTTAACTGTAG 58.963 44.000 0.00 0.00 0.00 2.74
198 199 5.517054 GTGATGCTAGTGACTTAACTGTAGC 59.483 44.000 0.00 0.00 33.96 3.58
199 200 4.092771 TGCTAGTGACTTAACTGTAGCG 57.907 45.455 0.00 0.00 35.43 4.26
200 201 3.119602 TGCTAGTGACTTAACTGTAGCGG 60.120 47.826 0.00 0.00 35.43 5.52
201 202 2.365408 AGTGACTTAACTGTAGCGGC 57.635 50.000 0.00 0.00 0.00 6.53
202 203 1.893801 AGTGACTTAACTGTAGCGGCT 59.106 47.619 7.98 7.98 0.00 5.52
203 204 2.094649 AGTGACTTAACTGTAGCGGCTC 60.095 50.000 5.39 0.00 0.00 4.70
204 205 1.203994 TGACTTAACTGTAGCGGCTCC 59.796 52.381 5.39 0.00 0.00 4.70
205 206 0.172803 ACTTAACTGTAGCGGCTCCG 59.827 55.000 5.39 3.56 43.09 4.63
206 207 0.454600 CTTAACTGTAGCGGCTCCGA 59.545 55.000 13.11 0.00 42.83 4.55
207 208 0.171903 TTAACTGTAGCGGCTCCGAC 59.828 55.000 13.11 0.00 42.83 4.79
208 209 0.961857 TAACTGTAGCGGCTCCGACA 60.962 55.000 13.11 4.66 42.83 4.35
209 210 1.812686 AACTGTAGCGGCTCCGACAA 61.813 55.000 13.11 0.00 42.83 3.18
210 211 1.517257 CTGTAGCGGCTCCGACAAG 60.517 63.158 13.11 0.00 42.83 3.16
211 212 2.886124 GTAGCGGCTCCGACAAGC 60.886 66.667 13.11 0.00 42.83 4.01
212 213 4.492160 TAGCGGCTCCGACAAGCG 62.492 66.667 13.11 0.00 43.45 4.68
216 217 3.869272 GGCTCCGACAAGCGCATG 61.869 66.667 11.47 11.60 43.45 4.06
217 218 3.121030 GCTCCGACAAGCGCATGT 61.121 61.111 19.48 19.48 39.11 3.21
218 219 2.780643 CTCCGACAAGCGCATGTG 59.219 61.111 24.55 14.59 39.11 3.21
219 220 3.372676 CTCCGACAAGCGCATGTGC 62.373 63.158 24.55 23.64 39.11 4.57
221 222 2.097160 CGACAAGCGCATGTGCTC 59.903 61.111 32.41 19.71 46.60 4.26
222 223 2.385875 CGACAAGCGCATGTGCTCT 61.386 57.895 32.41 20.82 46.60 4.09
223 224 1.134075 GACAAGCGCATGTGCTCTG 59.866 57.895 32.41 29.18 46.60 3.35
224 225 1.572085 GACAAGCGCATGTGCTCTGT 61.572 55.000 31.11 31.11 46.60 3.41
225 226 1.168407 ACAAGCGCATGTGCTCTGTT 61.168 50.000 32.41 15.53 46.60 3.16
226 227 0.039798 CAAGCGCATGTGCTCTGTTT 60.040 50.000 32.41 15.14 46.60 2.83
227 228 0.670162 AAGCGCATGTGCTCTGTTTT 59.330 45.000 32.41 14.38 46.60 2.43
228 229 0.039798 AGCGCATGTGCTCTGTTTTG 60.040 50.000 27.71 0.00 42.95 2.44
229 230 1.611592 GCGCATGTGCTCTGTTTTGC 61.612 55.000 23.77 0.00 39.32 3.68
230 231 0.039798 CGCATGTGCTCTGTTTTGCT 60.040 50.000 3.25 0.00 39.32 3.91
231 232 1.601162 CGCATGTGCTCTGTTTTGCTT 60.601 47.619 3.25 0.00 39.32 3.91
232 233 2.476821 GCATGTGCTCTGTTTTGCTTT 58.523 42.857 0.00 0.00 38.21 3.51
233 234 2.473984 GCATGTGCTCTGTTTTGCTTTC 59.526 45.455 0.00 0.00 38.21 2.62
234 235 2.869233 TGTGCTCTGTTTTGCTTTCC 57.131 45.000 0.00 0.00 0.00 3.13
235 236 2.378038 TGTGCTCTGTTTTGCTTTCCT 58.622 42.857 0.00 0.00 0.00 3.36
236 237 2.760092 TGTGCTCTGTTTTGCTTTCCTT 59.240 40.909 0.00 0.00 0.00 3.36
237 238 3.181487 TGTGCTCTGTTTTGCTTTCCTTC 60.181 43.478 0.00 0.00 0.00 3.46
238 239 3.023119 TGCTCTGTTTTGCTTTCCTTCA 58.977 40.909 0.00 0.00 0.00 3.02
239 240 3.181487 TGCTCTGTTTTGCTTTCCTTCAC 60.181 43.478 0.00 0.00 0.00 3.18
240 241 3.796844 GCTCTGTTTTGCTTTCCTTCACC 60.797 47.826 0.00 0.00 0.00 4.02
241 242 3.631250 TCTGTTTTGCTTTCCTTCACCT 58.369 40.909 0.00 0.00 0.00 4.00
242 243 4.023291 TCTGTTTTGCTTTCCTTCACCTT 58.977 39.130 0.00 0.00 0.00 3.50
243 244 4.466015 TCTGTTTTGCTTTCCTTCACCTTT 59.534 37.500 0.00 0.00 0.00 3.11
244 245 5.046663 TCTGTTTTGCTTTCCTTCACCTTTT 60.047 36.000 0.00 0.00 0.00 2.27
245 246 5.175127 TGTTTTGCTTTCCTTCACCTTTTC 58.825 37.500 0.00 0.00 0.00 2.29
246 247 4.400529 TTTGCTTTCCTTCACCTTTTCC 57.599 40.909 0.00 0.00 0.00 3.13
247 248 1.953686 TGCTTTCCTTCACCTTTTCCG 59.046 47.619 0.00 0.00 0.00 4.30
248 249 1.954382 GCTTTCCTTCACCTTTTCCGT 59.046 47.619 0.00 0.00 0.00 4.69
249 250 2.031069 GCTTTCCTTCACCTTTTCCGTC 60.031 50.000 0.00 0.00 0.00 4.79
250 251 3.477530 CTTTCCTTCACCTTTTCCGTCT 58.522 45.455 0.00 0.00 0.00 4.18
251 252 3.570912 TTCCTTCACCTTTTCCGTCTT 57.429 42.857 0.00 0.00 0.00 3.01
252 253 2.846193 TCCTTCACCTTTTCCGTCTTG 58.154 47.619 0.00 0.00 0.00 3.02
253 254 2.171870 TCCTTCACCTTTTCCGTCTTGT 59.828 45.455 0.00 0.00 0.00 3.16
254 255 3.388676 TCCTTCACCTTTTCCGTCTTGTA 59.611 43.478 0.00 0.00 0.00 2.41
255 256 4.131596 CCTTCACCTTTTCCGTCTTGTAA 58.868 43.478 0.00 0.00 0.00 2.41
256 257 4.760204 CCTTCACCTTTTCCGTCTTGTAAT 59.240 41.667 0.00 0.00 0.00 1.89
257 258 5.334879 CCTTCACCTTTTCCGTCTTGTAATG 60.335 44.000 0.00 0.00 0.00 1.90
258 259 4.069304 TCACCTTTTCCGTCTTGTAATGG 58.931 43.478 0.00 0.00 0.00 3.16
259 260 2.817844 ACCTTTTCCGTCTTGTAATGGC 59.182 45.455 0.00 0.00 0.00 4.40
260 261 3.081804 CCTTTTCCGTCTTGTAATGGCT 58.918 45.455 0.00 0.00 0.00 4.75
261 262 4.258543 CCTTTTCCGTCTTGTAATGGCTA 58.741 43.478 0.00 0.00 0.00 3.93
262 263 4.881850 CCTTTTCCGTCTTGTAATGGCTAT 59.118 41.667 0.00 0.00 0.00 2.97
263 264 6.053005 CCTTTTCCGTCTTGTAATGGCTATA 58.947 40.000 0.00 0.00 0.00 1.31
264 265 6.540914 CCTTTTCCGTCTTGTAATGGCTATAA 59.459 38.462 0.00 0.00 0.00 0.98
265 266 7.066525 CCTTTTCCGTCTTGTAATGGCTATAAA 59.933 37.037 0.00 0.00 0.00 1.40
266 267 7.548196 TTTCCGTCTTGTAATGGCTATAAAG 57.452 36.000 0.00 0.00 0.00 1.85
276 277 3.688553 GCTATAAAGCCAGCGACCT 57.311 52.632 0.00 0.00 43.40 3.85
277 278 1.954927 GCTATAAAGCCAGCGACCTT 58.045 50.000 0.00 0.00 43.40 3.50
278 279 1.599542 GCTATAAAGCCAGCGACCTTG 59.400 52.381 0.00 0.00 43.40 3.61
279 280 1.599542 CTATAAAGCCAGCGACCTTGC 59.400 52.381 0.00 0.00 0.00 4.01
281 282 2.113986 AAGCCAGCGACCTTGCTT 59.886 55.556 0.00 0.00 44.46 3.91
282 283 1.799258 AAAGCCAGCGACCTTGCTTG 61.799 55.000 3.25 0.00 46.01 4.01
283 284 4.410743 GCCAGCGACCTTGCTTGC 62.411 66.667 0.00 0.00 44.46 4.01
284 285 2.979676 CCAGCGACCTTGCTTGCA 60.980 61.111 0.00 0.00 44.46 4.08
285 286 2.554636 CCAGCGACCTTGCTTGCAA 61.555 57.895 7.83 7.83 44.46 4.08
286 287 1.081641 CAGCGACCTTGCTTGCAAG 60.082 57.895 22.44 22.44 44.46 4.01
287 288 1.227943 AGCGACCTTGCTTGCAAGA 60.228 52.632 30.39 12.25 44.46 3.02
288 289 1.208614 GCGACCTTGCTTGCAAGAG 59.791 57.895 30.39 22.53 34.26 2.85
289 290 1.871772 CGACCTTGCTTGCAAGAGG 59.128 57.895 30.39 27.48 34.26 3.69
290 291 1.580845 CGACCTTGCTTGCAAGAGGG 61.581 60.000 30.39 25.58 34.26 4.30
291 292 1.228675 ACCTTGCTTGCAAGAGGGG 60.229 57.895 30.39 25.27 34.26 4.79
292 293 2.643232 CCTTGCTTGCAAGAGGGGC 61.643 63.158 30.39 15.42 34.26 5.80
293 294 1.904865 CTTGCTTGCAAGAGGGGCA 60.905 57.895 30.39 18.00 40.00 5.36
294 295 1.228956 TTGCTTGCAAGAGGGGCAT 60.229 52.632 30.39 0.00 41.58 4.40
295 296 1.537814 TTGCTTGCAAGAGGGGCATG 61.538 55.000 30.39 1.03 41.58 4.06
296 297 1.679977 GCTTGCAAGAGGGGCATGA 60.680 57.895 30.39 0.00 41.58 3.07
297 298 1.941999 GCTTGCAAGAGGGGCATGAC 61.942 60.000 30.39 4.12 41.58 3.06
298 299 0.323178 CTTGCAAGAGGGGCATGACT 60.323 55.000 22.31 0.00 41.58 3.41
299 300 0.112995 TTGCAAGAGGGGCATGACTT 59.887 50.000 0.00 0.00 41.58 3.01
300 301 0.112995 TGCAAGAGGGGCATGACTTT 59.887 50.000 0.00 0.00 36.11 2.66
301 302 0.529378 GCAAGAGGGGCATGACTTTG 59.471 55.000 0.00 0.00 0.00 2.77
302 303 1.915141 CAAGAGGGGCATGACTTTGT 58.085 50.000 0.00 0.00 0.00 2.83
303 304 1.542915 CAAGAGGGGCATGACTTTGTG 59.457 52.381 0.00 0.00 0.00 3.33
304 305 0.773644 AGAGGGGCATGACTTTGTGT 59.226 50.000 0.00 0.00 0.00 3.72
305 306 1.985159 AGAGGGGCATGACTTTGTGTA 59.015 47.619 0.00 0.00 0.00 2.90
306 307 2.578021 AGAGGGGCATGACTTTGTGTAT 59.422 45.455 0.00 0.00 0.00 2.29
307 308 3.010584 AGAGGGGCATGACTTTGTGTATT 59.989 43.478 0.00 0.00 0.00 1.89
308 309 3.091545 AGGGGCATGACTTTGTGTATTG 58.908 45.455 0.00 0.00 0.00 1.90
309 310 2.166254 GGGGCATGACTTTGTGTATTGG 59.834 50.000 0.00 0.00 0.00 3.16
310 311 2.166254 GGGCATGACTTTGTGTATTGGG 59.834 50.000 0.00 0.00 0.00 4.12
311 312 2.825532 GGCATGACTTTGTGTATTGGGT 59.174 45.455 0.00 0.00 0.00 4.51
312 313 3.367292 GGCATGACTTTGTGTATTGGGTG 60.367 47.826 0.00 0.00 0.00 4.61
313 314 3.255642 GCATGACTTTGTGTATTGGGTGT 59.744 43.478 0.00 0.00 0.00 4.16
314 315 4.457603 GCATGACTTTGTGTATTGGGTGTA 59.542 41.667 0.00 0.00 0.00 2.90
315 316 5.048364 GCATGACTTTGTGTATTGGGTGTAA 60.048 40.000 0.00 0.00 0.00 2.41
316 317 6.515862 GCATGACTTTGTGTATTGGGTGTAAA 60.516 38.462 0.00 0.00 0.00 2.01
317 318 6.380095 TGACTTTGTGTATTGGGTGTAAAC 57.620 37.500 0.00 0.00 0.00 2.01
318 319 5.299782 TGACTTTGTGTATTGGGTGTAAACC 59.700 40.000 0.00 0.00 0.00 3.27
326 327 3.564262 GGGTGTAAACCCTAGCCAC 57.436 57.895 14.64 0.00 46.39 5.01
327 328 0.034767 GGGTGTAAACCCTAGCCACC 60.035 60.000 14.64 0.00 46.39 4.61
328 329 0.392060 GGTGTAAACCCTAGCCACCG 60.392 60.000 0.00 0.00 36.55 4.94
329 330 0.392060 GTGTAAACCCTAGCCACCGG 60.392 60.000 0.00 0.00 0.00 5.28
330 331 0.837260 TGTAAACCCTAGCCACCGGT 60.837 55.000 0.00 0.00 0.00 5.28
331 332 0.392060 GTAAACCCTAGCCACCGGTG 60.392 60.000 28.26 28.26 0.00 4.94
341 342 2.280254 CACCGGTGGCGTGTTGTA 60.280 61.111 27.57 0.00 0.00 2.41
342 343 1.669760 CACCGGTGGCGTGTTGTAT 60.670 57.895 27.57 0.00 0.00 2.29
343 344 1.375013 ACCGGTGGCGTGTTGTATC 60.375 57.895 6.12 0.00 0.00 2.24
344 345 1.079405 CCGGTGGCGTGTTGTATCT 60.079 57.895 0.00 0.00 0.00 1.98
345 346 0.173935 CCGGTGGCGTGTTGTATCTA 59.826 55.000 0.00 0.00 0.00 1.98
346 347 1.274596 CGGTGGCGTGTTGTATCTAC 58.725 55.000 0.00 0.00 0.00 2.59
347 348 1.135199 CGGTGGCGTGTTGTATCTACT 60.135 52.381 0.00 0.00 0.00 2.57
348 349 2.673043 CGGTGGCGTGTTGTATCTACTT 60.673 50.000 0.00 0.00 0.00 2.24
349 350 3.332034 GGTGGCGTGTTGTATCTACTTT 58.668 45.455 0.00 0.00 0.00 2.66
350 351 3.370061 GGTGGCGTGTTGTATCTACTTTC 59.630 47.826 0.00 0.00 0.00 2.62
351 352 3.370061 GTGGCGTGTTGTATCTACTTTCC 59.630 47.826 0.00 0.00 0.00 3.13
352 353 2.934553 GGCGTGTTGTATCTACTTTCCC 59.065 50.000 0.00 0.00 0.00 3.97
353 354 3.592059 GCGTGTTGTATCTACTTTCCCA 58.408 45.455 0.00 0.00 0.00 4.37
354 355 3.998341 GCGTGTTGTATCTACTTTCCCAA 59.002 43.478 0.00 0.00 0.00 4.12
355 356 4.634443 GCGTGTTGTATCTACTTTCCCAAT 59.366 41.667 0.00 0.00 0.00 3.16
356 357 5.123344 GCGTGTTGTATCTACTTTCCCAATT 59.877 40.000 0.00 0.00 0.00 2.32
357 358 6.674760 GCGTGTTGTATCTACTTTCCCAATTC 60.675 42.308 0.00 0.00 0.00 2.17
358 359 6.455113 CGTGTTGTATCTACTTTCCCAATTCG 60.455 42.308 0.00 0.00 0.00 3.34
359 360 5.353123 TGTTGTATCTACTTTCCCAATTCGC 59.647 40.000 0.00 0.00 0.00 4.70
360 361 5.092554 TGTATCTACTTTCCCAATTCGCA 57.907 39.130 0.00 0.00 0.00 5.10
361 362 5.492895 TGTATCTACTTTCCCAATTCGCAA 58.507 37.500 0.00 0.00 0.00 4.85
362 363 4.965119 ATCTACTTTCCCAATTCGCAAC 57.035 40.909 0.00 0.00 0.00 4.17
363 364 3.745799 TCTACTTTCCCAATTCGCAACA 58.254 40.909 0.00 0.00 0.00 3.33
364 365 4.138290 TCTACTTTCCCAATTCGCAACAA 58.862 39.130 0.00 0.00 0.00 2.83
365 366 3.369546 ACTTTCCCAATTCGCAACAAG 57.630 42.857 0.00 0.00 0.00 3.16
366 367 2.955660 ACTTTCCCAATTCGCAACAAGA 59.044 40.909 0.00 0.00 0.00 3.02
367 368 3.383185 ACTTTCCCAATTCGCAACAAGAA 59.617 39.130 0.00 0.00 0.00 2.52
368 369 3.363341 TTCCCAATTCGCAACAAGAAC 57.637 42.857 0.00 0.00 0.00 3.01
369 370 1.611491 TCCCAATTCGCAACAAGAACC 59.389 47.619 0.00 0.00 0.00 3.62
370 371 1.336795 CCCAATTCGCAACAAGAACCC 60.337 52.381 0.00 0.00 0.00 4.11
371 372 1.613437 CCAATTCGCAACAAGAACCCT 59.387 47.619 0.00 0.00 0.00 4.34
372 373 2.817258 CCAATTCGCAACAAGAACCCTA 59.183 45.455 0.00 0.00 0.00 3.53
373 374 3.119849 CCAATTCGCAACAAGAACCCTAG 60.120 47.826 0.00 0.00 0.00 3.02
374 375 2.922740 TTCGCAACAAGAACCCTAGT 57.077 45.000 0.00 0.00 0.00 2.57
375 376 2.922740 TCGCAACAAGAACCCTAGTT 57.077 45.000 0.00 0.00 39.54 2.24
383 384 3.325816 GAACCCTAGTTCGACGCTC 57.674 57.895 0.00 0.00 42.85 5.03
384 385 0.810016 GAACCCTAGTTCGACGCTCT 59.190 55.000 0.00 0.00 42.85 4.09
385 386 0.810016 AACCCTAGTTCGACGCTCTC 59.190 55.000 0.00 0.00 0.00 3.20
386 387 0.035247 ACCCTAGTTCGACGCTCTCT 60.035 55.000 0.00 0.00 0.00 3.10
387 388 0.378962 CCCTAGTTCGACGCTCTCTG 59.621 60.000 0.00 0.00 0.00 3.35
388 389 1.088306 CCTAGTTCGACGCTCTCTGT 58.912 55.000 0.00 0.00 0.00 3.41
389 390 1.469308 CCTAGTTCGACGCTCTCTGTT 59.531 52.381 0.00 0.00 0.00 3.16
390 391 2.095161 CCTAGTTCGACGCTCTCTGTTT 60.095 50.000 0.00 0.00 0.00 2.83
391 392 2.510768 AGTTCGACGCTCTCTGTTTT 57.489 45.000 0.00 0.00 0.00 2.43
392 393 2.395654 AGTTCGACGCTCTCTGTTTTC 58.604 47.619 0.00 0.00 0.00 2.29
393 394 1.122680 GTTCGACGCTCTCTGTTTTCG 59.877 52.381 0.00 0.00 0.00 3.46
394 395 0.309922 TCGACGCTCTCTGTTTTCGT 59.690 50.000 0.00 0.00 35.98 3.85
395 396 1.129326 CGACGCTCTCTGTTTTCGTT 58.871 50.000 0.00 0.00 33.21 3.85
396 397 1.122680 CGACGCTCTCTGTTTTCGTTC 59.877 52.381 0.00 0.00 33.21 3.95
397 398 1.456165 GACGCTCTCTGTTTTCGTTCC 59.544 52.381 0.00 0.00 33.21 3.62
398 399 1.068741 ACGCTCTCTGTTTTCGTTCCT 59.931 47.619 0.00 0.00 0.00 3.36
399 400 2.295349 ACGCTCTCTGTTTTCGTTCCTA 59.705 45.455 0.00 0.00 0.00 2.94
400 401 3.243636 ACGCTCTCTGTTTTCGTTCCTAA 60.244 43.478 0.00 0.00 0.00 2.69
401 402 3.739300 CGCTCTCTGTTTTCGTTCCTAAA 59.261 43.478 0.00 0.00 0.00 1.85
402 403 4.389077 CGCTCTCTGTTTTCGTTCCTAAAT 59.611 41.667 0.00 0.00 0.00 1.40
403 404 5.107065 CGCTCTCTGTTTTCGTTCCTAAATT 60.107 40.000 0.00 0.00 0.00 1.82
404 405 6.307915 GCTCTCTGTTTTCGTTCCTAAATTC 58.692 40.000 0.00 0.00 0.00 2.17
405 406 6.462073 TCTCTGTTTTCGTTCCTAAATTCG 57.538 37.500 0.00 0.00 0.00 3.34
406 407 5.025986 TCTGTTTTCGTTCCTAAATTCGC 57.974 39.130 0.00 0.00 0.00 4.70
407 408 4.753107 TCTGTTTTCGTTCCTAAATTCGCT 59.247 37.500 0.00 0.00 0.00 4.93
408 409 5.927689 TCTGTTTTCGTTCCTAAATTCGCTA 59.072 36.000 0.00 0.00 0.00 4.26
409 410 6.592607 TCTGTTTTCGTTCCTAAATTCGCTAT 59.407 34.615 0.00 0.00 0.00 2.97
410 411 7.118680 TCTGTTTTCGTTCCTAAATTCGCTATT 59.881 33.333 0.00 0.00 0.00 1.73
411 412 7.238571 TGTTTTCGTTCCTAAATTCGCTATTC 58.761 34.615 0.00 0.00 0.00 1.75
412 413 6.971527 TTTCGTTCCTAAATTCGCTATTCA 57.028 33.333 0.00 0.00 0.00 2.57
413 414 5.961395 TCGTTCCTAAATTCGCTATTCAC 57.039 39.130 0.00 0.00 0.00 3.18
414 415 5.412640 TCGTTCCTAAATTCGCTATTCACA 58.587 37.500 0.00 0.00 0.00 3.58
415 416 5.870433 TCGTTCCTAAATTCGCTATTCACAA 59.130 36.000 0.00 0.00 0.00 3.33
416 417 6.035650 TCGTTCCTAAATTCGCTATTCACAAG 59.964 38.462 0.00 0.00 0.00 3.16
417 418 5.734855 TCCTAAATTCGCTATTCACAAGC 57.265 39.130 0.00 0.00 36.60 4.01
418 419 5.428253 TCCTAAATTCGCTATTCACAAGCT 58.572 37.500 0.00 0.00 37.85 3.74
419 420 6.578944 TCCTAAATTCGCTATTCACAAGCTA 58.421 36.000 0.00 0.00 37.85 3.32
420 421 7.045416 TCCTAAATTCGCTATTCACAAGCTAA 58.955 34.615 0.00 0.00 37.85 3.09
421 422 7.551262 TCCTAAATTCGCTATTCACAAGCTAAA 59.449 33.333 0.00 0.00 37.85 1.85
422 423 8.345565 CCTAAATTCGCTATTCACAAGCTAAAT 58.654 33.333 0.00 0.00 37.85 1.40
423 424 9.722056 CTAAATTCGCTATTCACAAGCTAAATT 57.278 29.630 0.00 0.00 37.85 1.82
424 425 7.975866 AATTCGCTATTCACAAGCTAAATTG 57.024 32.000 0.00 0.00 37.85 2.32
425 426 4.908736 TCGCTATTCACAAGCTAAATTGC 58.091 39.130 0.00 0.00 37.85 3.56
426 427 3.720818 CGCTATTCACAAGCTAAATTGCG 59.279 43.478 17.76 17.76 43.81 4.85
427 428 4.662145 GCTATTCACAAGCTAAATTGCGT 58.338 39.130 0.00 0.00 37.01 5.24
431 432 5.530519 TTCACAAGCTAAATTGCGTAGAG 57.469 39.130 0.00 0.00 38.13 2.43
485 523 4.021192 TCCATGCGCTAATGATGATAGTGA 60.021 41.667 9.73 0.00 33.68 3.41
486 524 4.692155 CCATGCGCTAATGATGATAGTGAA 59.308 41.667 9.73 0.00 33.68 3.18
590 628 1.651240 CGGAGCAGCCCAAGAACATG 61.651 60.000 0.00 0.00 0.00 3.21
690 728 2.037251 GCTACAGACAACTTCTCACCCA 59.963 50.000 0.00 0.00 28.96 4.51
716 754 4.439253 AATATTAGGACAGGGTGGCTTC 57.561 45.455 0.00 0.00 0.00 3.86
856 895 4.385825 TGACGGACAAGAAGTAGCAATTT 58.614 39.130 0.00 0.00 0.00 1.82
874 913 1.846541 TTAAAAACTTGCTGCACGGC 58.153 45.000 11.00 0.00 0.00 5.68
930 969 4.274147 TCCAACTGGTAGCAAAACTTCAA 58.726 39.130 0.00 0.00 36.34 2.69
939 978 4.989279 AGCAAAACTTCAACACAGACAT 57.011 36.364 0.00 0.00 0.00 3.06
1036 1075 4.215613 GCTTGGACTACTTCATTTTCGGTT 59.784 41.667 0.00 0.00 0.00 4.44
1284 1327 7.279750 AGACTCCGAGTTAAATCCTAAGATC 57.720 40.000 1.71 0.00 0.00 2.75
1312 1355 4.840716 TTTGGCATGGCAAGGATATTTT 57.159 36.364 30.36 0.00 0.00 1.82
1318 1361 4.439974 GCATGGCAAGGATATTTTCGTCAA 60.440 41.667 0.00 0.00 0.00 3.18
1347 1390 3.260740 TCAAACAAAAACAAGCAGGCTG 58.739 40.909 10.94 10.94 0.00 4.85
1366 1409 5.428783 AGGCTGGTTGGAACATAGTAAGTAT 59.571 40.000 0.00 0.00 39.30 2.12
1405 1448 8.887264 ATTACCAATTAATGTTTCTACCCACA 57.113 30.769 0.00 0.00 0.00 4.17
1420 1463 4.118168 ACCCACACATTTTCCTTCTGAT 57.882 40.909 0.00 0.00 0.00 2.90
1455 1498 3.054655 TCTTTCCTAGTGGTTACATGGCC 60.055 47.826 0.00 0.00 34.23 5.36
1485 1528 1.478631 CATTTGAGGGCCTCCTTTCC 58.521 55.000 30.03 5.85 45.05 3.13
1502 1545 5.474532 TCCTTTCCATCAAGTCAGATGTTTG 59.525 40.000 0.00 0.00 43.00 2.93
1613 1656 9.283768 TCTTCTTCAATATGTAAGCAAGTTTGA 57.716 29.630 0.00 0.00 0.00 2.69
1639 1682 5.471797 TCTGTAAAATTGGTGCATTCTCGAA 59.528 36.000 0.00 0.00 0.00 3.71
1640 1683 6.016693 TCTGTAAAATTGGTGCATTCTCGAAA 60.017 34.615 0.00 0.00 0.00 3.46
1644 1687 7.495135 AAAATTGGTGCATTCTCGAAATTTT 57.505 28.000 0.00 5.86 0.00 1.82
1669 1713 4.855340 TCCATGAATTGTAGGGGACTTTC 58.145 43.478 0.00 0.00 43.67 2.62
1678 1722 5.333566 TGTAGGGGACTTTCCATTCTTTT 57.666 39.130 0.00 0.00 43.67 2.27
1684 1728 4.329392 GGACTTTCCATTCTTTTCCCGTA 58.671 43.478 0.00 0.00 36.28 4.02
1759 1806 6.070078 ACCCCTACCGTCAAATTTATGTAAGA 60.070 38.462 0.00 0.00 0.00 2.10
1763 1810 6.505044 ACCGTCAAATTTATGTAAGAACCC 57.495 37.500 0.00 0.00 0.00 4.11
1790 1837 1.152610 GGCATGGCAGATGTGGGAT 60.153 57.895 15.47 0.00 0.00 3.85
1794 1841 2.380941 CATGGCAGATGTGGGATGAAA 58.619 47.619 0.00 0.00 0.00 2.69
1861 1908 4.945543 TGAACCAGGAGACATGATGAAATG 59.054 41.667 0.00 0.00 0.00 2.32
2083 2131 9.268268 TGATGGTAGATAAACGGTCATTTATTC 57.732 33.333 0.00 0.00 35.38 1.75
2210 2258 8.274322 CACCCATTTATCCTATTCCTGCATATA 58.726 37.037 0.00 0.00 0.00 0.86
2311 2368 2.300152 CTGGAACTAGCACAAGACCTGA 59.700 50.000 0.00 0.00 0.00 3.86
2336 2393 2.250031 TGCTGGGCAGATCAACAAAAT 58.750 42.857 0.00 0.00 33.32 1.82
2692 2812 7.432252 CAGAAACTTTGGAACTTTGTGACATAC 59.568 37.037 0.00 0.00 0.00 2.39
3034 3163 5.014755 TGTCCCAACCCAAATAGATAGTGTT 59.985 40.000 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.890174 CCCCCAATTGAAACCGAGC 59.110 57.895 7.12 0.00 0.00 5.03
21 22 0.181350 CTGAGCCTGACAATACCCCC 59.819 60.000 0.00 0.00 0.00 5.40
22 23 0.912486 ACTGAGCCTGACAATACCCC 59.088 55.000 0.00 0.00 0.00 4.95
23 24 2.237392 AGAACTGAGCCTGACAATACCC 59.763 50.000 0.00 0.00 0.00 3.69
24 25 3.618690 AGAACTGAGCCTGACAATACC 57.381 47.619 0.00 0.00 0.00 2.73
25 26 6.341316 TGATAAGAACTGAGCCTGACAATAC 58.659 40.000 0.00 0.00 0.00 1.89
26 27 6.544928 TGATAAGAACTGAGCCTGACAATA 57.455 37.500 0.00 0.00 0.00 1.90
27 28 5.426689 TGATAAGAACTGAGCCTGACAAT 57.573 39.130 0.00 0.00 0.00 2.71
28 29 4.890158 TGATAAGAACTGAGCCTGACAA 57.110 40.909 0.00 0.00 0.00 3.18
29 30 5.423015 GAATGATAAGAACTGAGCCTGACA 58.577 41.667 0.00 0.00 0.00 3.58
30 31 4.813697 GGAATGATAAGAACTGAGCCTGAC 59.186 45.833 0.00 0.00 0.00 3.51
31 32 4.141620 GGGAATGATAAGAACTGAGCCTGA 60.142 45.833 0.00 0.00 0.00 3.86
32 33 4.133078 GGGAATGATAAGAACTGAGCCTG 58.867 47.826 0.00 0.00 0.00 4.85
33 34 3.137360 GGGGAATGATAAGAACTGAGCCT 59.863 47.826 0.00 0.00 0.00 4.58
34 35 3.137360 AGGGGAATGATAAGAACTGAGCC 59.863 47.826 0.00 0.00 0.00 4.70
35 36 4.133078 CAGGGGAATGATAAGAACTGAGC 58.867 47.826 0.00 0.00 0.00 4.26
36 37 5.363939 GACAGGGGAATGATAAGAACTGAG 58.636 45.833 0.00 0.00 0.00 3.35
37 38 4.164221 GGACAGGGGAATGATAAGAACTGA 59.836 45.833 0.00 0.00 0.00 3.41
38 39 4.080356 TGGACAGGGGAATGATAAGAACTG 60.080 45.833 0.00 0.00 0.00 3.16
39 40 4.111577 TGGACAGGGGAATGATAAGAACT 58.888 43.478 0.00 0.00 0.00 3.01
40 41 4.455606 CTGGACAGGGGAATGATAAGAAC 58.544 47.826 0.00 0.00 0.00 3.01
41 42 3.117888 GCTGGACAGGGGAATGATAAGAA 60.118 47.826 1.01 0.00 0.00 2.52
42 43 2.439507 GCTGGACAGGGGAATGATAAGA 59.560 50.000 1.01 0.00 0.00 2.10
43 44 2.808202 CGCTGGACAGGGGAATGATAAG 60.808 54.545 8.36 0.00 37.68 1.73
44 45 1.140852 CGCTGGACAGGGGAATGATAA 59.859 52.381 8.36 0.00 37.68 1.75
45 46 0.758734 CGCTGGACAGGGGAATGATA 59.241 55.000 8.36 0.00 37.68 2.15
46 47 1.274703 ACGCTGGACAGGGGAATGAT 61.275 55.000 18.71 0.00 44.60 2.45
47 48 1.918293 ACGCTGGACAGGGGAATGA 60.918 57.895 18.71 0.00 44.60 2.57
48 49 1.746615 CACGCTGGACAGGGGAATG 60.747 63.158 18.71 6.28 44.60 2.67
49 50 2.671070 CACGCTGGACAGGGGAAT 59.329 61.111 18.71 0.00 44.60 3.01
50 51 4.329545 GCACGCTGGACAGGGGAA 62.330 66.667 18.71 0.00 44.60 3.97
64 65 0.458716 GCTACTGAGTCTTCCGGCAC 60.459 60.000 0.00 0.00 0.00 5.01
65 66 1.605058 GGCTACTGAGTCTTCCGGCA 61.605 60.000 0.00 0.00 0.00 5.69
66 67 1.142097 GGCTACTGAGTCTTCCGGC 59.858 63.158 0.00 0.00 0.00 6.13
67 68 1.313812 ACGGCTACTGAGTCTTCCGG 61.314 60.000 19.15 0.00 40.99 5.14
68 69 1.331138 CTACGGCTACTGAGTCTTCCG 59.669 57.143 15.29 15.29 42.24 4.30
69 70 2.641305 TCTACGGCTACTGAGTCTTCC 58.359 52.381 0.00 0.00 0.00 3.46
70 71 4.024387 CAGATCTACGGCTACTGAGTCTTC 60.024 50.000 0.00 0.00 0.00 2.87
71 72 3.880490 CAGATCTACGGCTACTGAGTCTT 59.120 47.826 0.00 0.00 0.00 3.01
72 73 3.118186 ACAGATCTACGGCTACTGAGTCT 60.118 47.826 0.00 0.00 33.53 3.24
73 74 3.207778 ACAGATCTACGGCTACTGAGTC 58.792 50.000 0.00 0.00 33.53 3.36
74 75 3.207778 GACAGATCTACGGCTACTGAGT 58.792 50.000 0.00 0.00 33.53 3.41
75 76 3.206964 TGACAGATCTACGGCTACTGAG 58.793 50.000 0.00 0.00 33.53 3.35
76 77 3.277142 TGACAGATCTACGGCTACTGA 57.723 47.619 0.00 0.00 33.53 3.41
77 78 3.364465 CGATGACAGATCTACGGCTACTG 60.364 52.174 0.00 0.00 35.14 2.74
78 79 2.809119 CGATGACAGATCTACGGCTACT 59.191 50.000 0.00 0.00 0.00 2.57
79 80 2.548904 ACGATGACAGATCTACGGCTAC 59.451 50.000 0.00 0.00 0.00 3.58
80 81 2.548480 CACGATGACAGATCTACGGCTA 59.452 50.000 0.00 0.00 0.00 3.93
81 82 1.335182 CACGATGACAGATCTACGGCT 59.665 52.381 0.00 0.00 0.00 5.52
82 83 1.065701 ACACGATGACAGATCTACGGC 59.934 52.381 0.00 0.00 0.00 5.68
83 84 2.541794 CCACACGATGACAGATCTACGG 60.542 54.545 0.00 0.00 0.00 4.02
84 85 2.720933 CCACACGATGACAGATCTACG 58.279 52.381 0.00 0.00 0.00 3.51
85 86 2.099921 AGCCACACGATGACAGATCTAC 59.900 50.000 0.00 0.00 0.00 2.59
86 87 2.359214 GAGCCACACGATGACAGATCTA 59.641 50.000 0.00 0.00 0.00 1.98
87 88 1.135915 GAGCCACACGATGACAGATCT 59.864 52.381 0.00 0.00 0.00 2.75
88 89 1.135915 AGAGCCACACGATGACAGATC 59.864 52.381 0.00 0.00 0.00 2.75
89 90 1.134877 CAGAGCCACACGATGACAGAT 60.135 52.381 0.00 0.00 0.00 2.90
90 91 0.244721 CAGAGCCACACGATGACAGA 59.755 55.000 0.00 0.00 0.00 3.41
91 92 0.738762 CCAGAGCCACACGATGACAG 60.739 60.000 0.00 0.00 0.00 3.51
92 93 1.184970 TCCAGAGCCACACGATGACA 61.185 55.000 0.00 0.00 0.00 3.58
93 94 0.459237 CTCCAGAGCCACACGATGAC 60.459 60.000 0.00 0.00 0.00 3.06
94 95 1.893062 CTCCAGAGCCACACGATGA 59.107 57.895 0.00 0.00 0.00 2.92
95 96 4.509756 CTCCAGAGCCACACGATG 57.490 61.111 0.00 0.00 0.00 3.84
105 106 1.405821 ACCGTTATCTTCGCTCCAGAG 59.594 52.381 0.00 0.00 0.00 3.35
106 107 1.471119 ACCGTTATCTTCGCTCCAGA 58.529 50.000 0.00 0.00 0.00 3.86
107 108 2.194271 GAACCGTTATCTTCGCTCCAG 58.806 52.381 0.00 0.00 0.00 3.86
108 109 1.468565 CGAACCGTTATCTTCGCTCCA 60.469 52.381 0.00 0.00 33.47 3.86
109 110 1.197910 CGAACCGTTATCTTCGCTCC 58.802 55.000 0.00 0.00 33.47 4.70
110 111 2.184385 TCGAACCGTTATCTTCGCTC 57.816 50.000 0.00 0.00 39.30 5.03
111 112 2.098607 TGATCGAACCGTTATCTTCGCT 59.901 45.455 0.00 0.00 39.30 4.93
112 113 2.456989 TGATCGAACCGTTATCTTCGC 58.543 47.619 0.00 0.00 39.30 4.70
113 114 4.027621 CACTTGATCGAACCGTTATCTTCG 60.028 45.833 0.00 0.00 40.52 3.79
114 115 4.267928 CCACTTGATCGAACCGTTATCTTC 59.732 45.833 0.00 0.00 0.00 2.87
115 116 4.181578 CCACTTGATCGAACCGTTATCTT 58.818 43.478 0.00 0.00 0.00 2.40
116 117 3.430374 CCCACTTGATCGAACCGTTATCT 60.430 47.826 0.00 0.00 0.00 1.98
117 118 2.864343 CCCACTTGATCGAACCGTTATC 59.136 50.000 0.00 0.00 0.00 1.75
118 119 2.901249 CCCACTTGATCGAACCGTTAT 58.099 47.619 0.00 0.00 0.00 1.89
119 120 1.673626 GCCCACTTGATCGAACCGTTA 60.674 52.381 0.00 0.00 0.00 3.18
120 121 0.953960 GCCCACTTGATCGAACCGTT 60.954 55.000 0.00 0.00 0.00 4.44
121 122 1.375523 GCCCACTTGATCGAACCGT 60.376 57.895 0.00 0.00 0.00 4.83
122 123 1.361668 CTGCCCACTTGATCGAACCG 61.362 60.000 0.00 0.00 0.00 4.44
123 124 1.648467 GCTGCCCACTTGATCGAACC 61.648 60.000 0.00 0.00 0.00 3.62
124 125 0.674895 AGCTGCCCACTTGATCGAAC 60.675 55.000 0.00 0.00 0.00 3.95
125 126 0.391661 GAGCTGCCCACTTGATCGAA 60.392 55.000 0.00 0.00 0.00 3.71
126 127 1.219124 GAGCTGCCCACTTGATCGA 59.781 57.895 0.00 0.00 0.00 3.59
127 128 0.809241 GAGAGCTGCCCACTTGATCG 60.809 60.000 0.00 0.00 0.00 3.69
128 129 0.463474 GGAGAGCTGCCCACTTGATC 60.463 60.000 0.00 0.00 0.00 2.92
129 130 0.913451 AGGAGAGCTGCCCACTTGAT 60.913 55.000 0.00 0.00 0.00 2.57
130 131 1.537397 AGGAGAGCTGCCCACTTGA 60.537 57.895 0.00 0.00 0.00 3.02
131 132 1.078567 GAGGAGAGCTGCCCACTTG 60.079 63.158 0.00 0.00 0.00 3.16
132 133 2.297129 GGAGGAGAGCTGCCCACTT 61.297 63.158 0.00 0.00 0.00 3.16
133 134 2.686835 GGAGGAGAGCTGCCCACT 60.687 66.667 0.00 0.00 0.00 4.00
134 135 4.154347 CGGAGGAGAGCTGCCCAC 62.154 72.222 0.00 0.00 0.00 4.61
135 136 4.704103 ACGGAGGAGAGCTGCCCA 62.704 66.667 0.00 0.00 0.00 5.36
136 137 3.844090 GACGGAGGAGAGCTGCCC 61.844 72.222 0.00 0.00 0.00 5.36
137 138 4.200283 CGACGGAGGAGAGCTGCC 62.200 72.222 0.00 0.00 0.00 4.85
138 139 2.400896 GATCGACGGAGGAGAGCTGC 62.401 65.000 0.00 0.00 0.00 5.25
139 140 0.817634 AGATCGACGGAGGAGAGCTG 60.818 60.000 0.00 0.00 0.00 4.24
140 141 0.817634 CAGATCGACGGAGGAGAGCT 60.818 60.000 0.00 0.00 0.00 4.09
141 142 1.652012 CAGATCGACGGAGGAGAGC 59.348 63.158 0.00 0.00 0.00 4.09
142 143 1.652012 GCAGATCGACGGAGGAGAG 59.348 63.158 0.00 0.00 0.00 3.20
143 144 1.824329 GGCAGATCGACGGAGGAGA 60.824 63.158 0.00 0.00 0.00 3.71
144 145 1.459455 ATGGCAGATCGACGGAGGAG 61.459 60.000 0.00 0.00 0.00 3.69
145 146 1.455773 ATGGCAGATCGACGGAGGA 60.456 57.895 0.00 0.00 0.00 3.71
146 147 1.006805 GATGGCAGATCGACGGAGG 60.007 63.158 0.00 0.00 0.00 4.30
147 148 1.006805 GGATGGCAGATCGACGGAG 60.007 63.158 0.00 0.00 0.00 4.63
148 149 1.326951 TTGGATGGCAGATCGACGGA 61.327 55.000 0.00 0.00 0.00 4.69
149 150 0.877649 CTTGGATGGCAGATCGACGG 60.878 60.000 0.00 0.00 0.00 4.79
150 151 0.877649 CCTTGGATGGCAGATCGACG 60.878 60.000 0.00 0.00 0.00 5.12
151 152 0.533755 CCCTTGGATGGCAGATCGAC 60.534 60.000 0.00 0.00 0.00 4.20
152 153 0.982852 ACCCTTGGATGGCAGATCGA 60.983 55.000 0.00 0.00 0.00 3.59
153 154 0.816825 CACCCTTGGATGGCAGATCG 60.817 60.000 0.00 0.00 0.00 3.69
154 155 3.106738 CACCCTTGGATGGCAGATC 57.893 57.895 0.00 0.00 0.00 2.75
164 165 0.107017 CTAGCATCACCCACCCTTGG 60.107 60.000 0.00 0.00 43.50 3.61
165 166 0.620556 ACTAGCATCACCCACCCTTG 59.379 55.000 0.00 0.00 0.00 3.61
166 167 0.620556 CACTAGCATCACCCACCCTT 59.379 55.000 0.00 0.00 0.00 3.95
167 168 0.252696 TCACTAGCATCACCCACCCT 60.253 55.000 0.00 0.00 0.00 4.34
168 169 0.107654 GTCACTAGCATCACCCACCC 60.108 60.000 0.00 0.00 0.00 4.61
169 170 0.905357 AGTCACTAGCATCACCCACC 59.095 55.000 0.00 0.00 0.00 4.61
170 171 2.770164 AAGTCACTAGCATCACCCAC 57.230 50.000 0.00 0.00 0.00 4.61
171 172 3.838317 AGTTAAGTCACTAGCATCACCCA 59.162 43.478 0.00 0.00 0.00 4.51
172 173 4.184629 CAGTTAAGTCACTAGCATCACCC 58.815 47.826 0.00 0.00 0.00 4.61
173 174 4.822026 ACAGTTAAGTCACTAGCATCACC 58.178 43.478 0.00 0.00 0.00 4.02
174 175 5.517054 GCTACAGTTAAGTCACTAGCATCAC 59.483 44.000 0.00 0.00 31.24 3.06
175 176 5.651530 GCTACAGTTAAGTCACTAGCATCA 58.348 41.667 0.00 0.00 31.24 3.07
176 177 4.735822 CGCTACAGTTAAGTCACTAGCATC 59.264 45.833 9.99 0.00 30.56 3.91
177 178 4.440250 CCGCTACAGTTAAGTCACTAGCAT 60.440 45.833 9.99 0.00 30.56 3.79
178 179 3.119602 CCGCTACAGTTAAGTCACTAGCA 60.120 47.826 9.99 0.00 30.56 3.49
179 180 3.436496 CCGCTACAGTTAAGTCACTAGC 58.564 50.000 0.00 0.00 0.00 3.42
180 181 3.128938 AGCCGCTACAGTTAAGTCACTAG 59.871 47.826 0.00 0.00 0.00 2.57
181 182 3.087031 AGCCGCTACAGTTAAGTCACTA 58.913 45.455 0.00 0.00 0.00 2.74
182 183 1.893801 AGCCGCTACAGTTAAGTCACT 59.106 47.619 0.00 0.00 0.00 3.41
183 184 2.260481 GAGCCGCTACAGTTAAGTCAC 58.740 52.381 0.00 0.00 0.00 3.67
184 185 1.203994 GGAGCCGCTACAGTTAAGTCA 59.796 52.381 0.00 0.00 0.00 3.41
185 186 1.798079 CGGAGCCGCTACAGTTAAGTC 60.798 57.143 2.85 0.00 0.00 3.01
186 187 0.172803 CGGAGCCGCTACAGTTAAGT 59.827 55.000 2.85 0.00 0.00 2.24
187 188 0.454600 TCGGAGCCGCTACAGTTAAG 59.545 55.000 2.85 0.00 39.59 1.85
188 189 0.171903 GTCGGAGCCGCTACAGTTAA 59.828 55.000 2.85 0.00 39.59 2.01
189 190 0.961857 TGTCGGAGCCGCTACAGTTA 60.962 55.000 2.85 0.00 39.59 2.24
190 191 1.812686 TTGTCGGAGCCGCTACAGTT 61.813 55.000 2.85 0.00 39.59 3.16
191 192 2.214181 CTTGTCGGAGCCGCTACAGT 62.214 60.000 2.85 0.00 39.59 3.55
192 193 1.517257 CTTGTCGGAGCCGCTACAG 60.517 63.158 2.85 0.00 39.59 2.74
193 194 2.571757 CTTGTCGGAGCCGCTACA 59.428 61.111 2.85 1.55 39.59 2.74
194 195 2.886124 GCTTGTCGGAGCCGCTAC 60.886 66.667 3.59 0.00 39.59 3.58
195 196 4.492160 CGCTTGTCGGAGCCGCTA 62.492 66.667 3.59 0.00 39.51 4.26
199 200 3.869272 CATGCGCTTGTCGGAGCC 61.869 66.667 14.73 0.00 43.11 4.70
200 201 3.121030 ACATGCGCTTGTCGGAGC 61.121 61.111 21.97 0.00 43.11 4.70
201 202 2.780643 CACATGCGCTTGTCGGAG 59.219 61.111 24.44 10.97 43.11 4.63
202 203 3.422303 GCACATGCGCTTGTCGGA 61.422 61.111 24.44 0.00 44.23 4.55
203 204 3.372676 GAGCACATGCGCTTGTCGG 62.373 63.158 24.44 15.98 44.01 4.79
204 205 2.097160 GAGCACATGCGCTTGTCG 59.903 61.111 24.44 19.56 44.01 4.35
212 213 2.144482 AAGCAAAACAGAGCACATGC 57.856 45.000 0.00 0.00 42.49 4.06
213 214 3.054878 GGAAAGCAAAACAGAGCACATG 58.945 45.455 0.00 0.00 0.00 3.21
214 215 2.961062 AGGAAAGCAAAACAGAGCACAT 59.039 40.909 0.00 0.00 0.00 3.21
215 216 2.378038 AGGAAAGCAAAACAGAGCACA 58.622 42.857 0.00 0.00 0.00 4.57
216 217 3.181487 TGAAGGAAAGCAAAACAGAGCAC 60.181 43.478 0.00 0.00 0.00 4.40
217 218 3.023119 TGAAGGAAAGCAAAACAGAGCA 58.977 40.909 0.00 0.00 0.00 4.26
218 219 3.375642 GTGAAGGAAAGCAAAACAGAGC 58.624 45.455 0.00 0.00 0.00 4.09
219 220 3.633986 AGGTGAAGGAAAGCAAAACAGAG 59.366 43.478 0.00 0.00 0.00 3.35
220 221 3.631250 AGGTGAAGGAAAGCAAAACAGA 58.369 40.909 0.00 0.00 0.00 3.41
221 222 4.391405 AAGGTGAAGGAAAGCAAAACAG 57.609 40.909 0.00 0.00 0.00 3.16
222 223 4.817318 AAAGGTGAAGGAAAGCAAAACA 57.183 36.364 0.00 0.00 0.00 2.83
223 224 4.570772 GGAAAAGGTGAAGGAAAGCAAAAC 59.429 41.667 0.00 0.00 0.00 2.43
224 225 4.679372 CGGAAAAGGTGAAGGAAAGCAAAA 60.679 41.667 0.00 0.00 0.00 2.44
225 226 3.181480 CGGAAAAGGTGAAGGAAAGCAAA 60.181 43.478 0.00 0.00 0.00 3.68
226 227 2.360801 CGGAAAAGGTGAAGGAAAGCAA 59.639 45.455 0.00 0.00 0.00 3.91
227 228 1.953686 CGGAAAAGGTGAAGGAAAGCA 59.046 47.619 0.00 0.00 0.00 3.91
228 229 1.954382 ACGGAAAAGGTGAAGGAAAGC 59.046 47.619 0.00 0.00 0.00 3.51
229 230 3.477530 AGACGGAAAAGGTGAAGGAAAG 58.522 45.455 0.00 0.00 0.00 2.62
230 231 3.570912 AGACGGAAAAGGTGAAGGAAA 57.429 42.857 0.00 0.00 0.00 3.13
231 232 3.211045 CAAGACGGAAAAGGTGAAGGAA 58.789 45.455 0.00 0.00 0.00 3.36
232 233 2.171870 ACAAGACGGAAAAGGTGAAGGA 59.828 45.455 0.00 0.00 0.00 3.36
233 234 2.572290 ACAAGACGGAAAAGGTGAAGG 58.428 47.619 0.00 0.00 0.00 3.46
234 235 5.334879 CCATTACAAGACGGAAAAGGTGAAG 60.335 44.000 0.00 0.00 0.00 3.02
235 236 4.517453 CCATTACAAGACGGAAAAGGTGAA 59.483 41.667 0.00 0.00 0.00 3.18
236 237 4.069304 CCATTACAAGACGGAAAAGGTGA 58.931 43.478 0.00 0.00 0.00 4.02
237 238 3.365969 GCCATTACAAGACGGAAAAGGTG 60.366 47.826 0.00 0.00 0.00 4.00
238 239 2.817844 GCCATTACAAGACGGAAAAGGT 59.182 45.455 0.00 0.00 0.00 3.50
239 240 3.081804 AGCCATTACAAGACGGAAAAGG 58.918 45.455 0.00 0.00 0.00 3.11
240 241 7.548196 TTATAGCCATTACAAGACGGAAAAG 57.452 36.000 0.00 0.00 0.00 2.27
241 242 7.414762 GCTTTATAGCCATTACAAGACGGAAAA 60.415 37.037 0.00 0.00 41.74 2.29
242 243 6.037830 GCTTTATAGCCATTACAAGACGGAAA 59.962 38.462 0.00 0.00 41.74 3.13
243 244 5.526111 GCTTTATAGCCATTACAAGACGGAA 59.474 40.000 0.00 0.00 41.74 4.30
244 245 5.054477 GCTTTATAGCCATTACAAGACGGA 58.946 41.667 0.00 0.00 41.74 4.69
245 246 5.344207 GCTTTATAGCCATTACAAGACGG 57.656 43.478 0.00 0.00 41.74 4.79
259 260 1.599542 GCAAGGTCGCTGGCTTTATAG 59.400 52.381 0.00 0.00 0.00 1.31
260 261 1.209504 AGCAAGGTCGCTGGCTTTATA 59.790 47.619 0.00 0.00 41.85 0.98
261 262 0.035056 AGCAAGGTCGCTGGCTTTAT 60.035 50.000 0.00 0.00 41.85 1.40
262 263 0.250727 AAGCAAGGTCGCTGGCTTTA 60.251 50.000 0.00 0.00 43.56 1.85
263 264 1.529244 AAGCAAGGTCGCTGGCTTT 60.529 52.632 0.00 0.00 43.56 3.51
264 265 2.113986 AAGCAAGGTCGCTGGCTT 59.886 55.556 0.00 0.00 42.89 4.35
265 266 2.670934 CAAGCAAGGTCGCTGGCT 60.671 61.111 0.00 0.00 42.89 4.75
267 268 2.467946 CTTGCAAGCAAGGTCGCTGG 62.468 60.000 23.48 0.05 46.88 4.85
268 269 1.081641 CTTGCAAGCAAGGTCGCTG 60.082 57.895 23.48 0.74 46.88 5.18
269 270 3.348236 CTTGCAAGCAAGGTCGCT 58.652 55.556 23.48 0.00 46.88 4.93
276 277 1.228956 ATGCCCCTCTTGCAAGCAA 60.229 52.632 21.99 7.33 42.92 3.91
277 278 1.980232 CATGCCCCTCTTGCAAGCA 60.980 57.895 21.99 16.66 42.92 3.91
278 279 1.679977 TCATGCCCCTCTTGCAAGC 60.680 57.895 21.99 11.09 42.92 4.01
279 280 0.323178 AGTCATGCCCCTCTTGCAAG 60.323 55.000 20.81 20.81 42.92 4.01
280 281 0.112995 AAGTCATGCCCCTCTTGCAA 59.887 50.000 0.00 0.00 42.92 4.08
281 282 0.112995 AAAGTCATGCCCCTCTTGCA 59.887 50.000 0.00 0.00 43.97 4.08
282 283 0.529378 CAAAGTCATGCCCCTCTTGC 59.471 55.000 0.00 0.00 0.00 4.01
283 284 1.542915 CACAAAGTCATGCCCCTCTTG 59.457 52.381 0.00 0.00 0.00 3.02
284 285 1.145738 ACACAAAGTCATGCCCCTCTT 59.854 47.619 0.00 0.00 0.00 2.85
285 286 0.773644 ACACAAAGTCATGCCCCTCT 59.226 50.000 0.00 0.00 0.00 3.69
286 287 2.489938 TACACAAAGTCATGCCCCTC 57.510 50.000 0.00 0.00 0.00 4.30
287 288 3.091545 CAATACACAAAGTCATGCCCCT 58.908 45.455 0.00 0.00 0.00 4.79
288 289 2.166254 CCAATACACAAAGTCATGCCCC 59.834 50.000 0.00 0.00 0.00 5.80
289 290 2.166254 CCCAATACACAAAGTCATGCCC 59.834 50.000 0.00 0.00 0.00 5.36
290 291 2.825532 ACCCAATACACAAAGTCATGCC 59.174 45.455 0.00 0.00 0.00 4.40
291 292 3.255642 ACACCCAATACACAAAGTCATGC 59.744 43.478 0.00 0.00 0.00 4.06
292 293 6.567687 TTACACCCAATACACAAAGTCATG 57.432 37.500 0.00 0.00 0.00 3.07
293 294 6.015772 GGTTTACACCCAATACACAAAGTCAT 60.016 38.462 0.00 0.00 37.03 3.06
294 295 5.299782 GGTTTACACCCAATACACAAAGTCA 59.700 40.000 0.00 0.00 37.03 3.41
295 296 5.765176 GGTTTACACCCAATACACAAAGTC 58.235 41.667 0.00 0.00 37.03 3.01
296 297 5.777850 GGTTTACACCCAATACACAAAGT 57.222 39.130 0.00 0.00 37.03 2.66
309 310 0.392060 CGGTGGCTAGGGTTTACACC 60.392 60.000 0.00 0.00 46.14 4.16
310 311 0.392060 CCGGTGGCTAGGGTTTACAC 60.392 60.000 0.00 0.00 0.00 2.90
311 312 0.837260 ACCGGTGGCTAGGGTTTACA 60.837 55.000 6.12 0.00 0.00 2.41
312 313 0.392060 CACCGGTGGCTAGGGTTTAC 60.392 60.000 27.57 0.00 29.82 2.01
313 314 1.555477 CCACCGGTGGCTAGGGTTTA 61.555 60.000 39.44 0.00 44.73 2.01
314 315 2.754375 CACCGGTGGCTAGGGTTT 59.246 61.111 27.57 0.00 29.82 3.27
315 316 3.327404 CCACCGGTGGCTAGGGTT 61.327 66.667 39.44 0.00 44.73 4.11
324 325 1.632046 GATACAACACGCCACCGGTG 61.632 60.000 28.26 28.26 39.22 4.94
325 326 1.375013 GATACAACACGCCACCGGT 60.375 57.895 0.00 0.00 39.22 5.28
326 327 0.173935 TAGATACAACACGCCACCGG 59.826 55.000 0.00 0.00 39.22 5.28
327 328 1.135199 AGTAGATACAACACGCCACCG 60.135 52.381 0.00 0.00 41.14 4.94
328 329 2.667473 AGTAGATACAACACGCCACC 57.333 50.000 0.00 0.00 0.00 4.61
329 330 3.370061 GGAAAGTAGATACAACACGCCAC 59.630 47.826 0.00 0.00 0.00 5.01
330 331 3.592059 GGAAAGTAGATACAACACGCCA 58.408 45.455 0.00 0.00 0.00 5.69
331 332 2.934553 GGGAAAGTAGATACAACACGCC 59.065 50.000 0.00 0.00 0.00 5.68
332 333 3.592059 TGGGAAAGTAGATACAACACGC 58.408 45.455 0.00 0.00 0.00 5.34
333 334 6.455113 CGAATTGGGAAAGTAGATACAACACG 60.455 42.308 0.00 0.00 0.00 4.49
334 335 6.674760 GCGAATTGGGAAAGTAGATACAACAC 60.675 42.308 0.00 0.00 0.00 3.32
335 336 5.353123 GCGAATTGGGAAAGTAGATACAACA 59.647 40.000 0.00 0.00 0.00 3.33
336 337 5.353123 TGCGAATTGGGAAAGTAGATACAAC 59.647 40.000 0.00 0.00 0.00 3.32
337 338 5.492895 TGCGAATTGGGAAAGTAGATACAA 58.507 37.500 0.00 0.00 0.00 2.41
338 339 5.092554 TGCGAATTGGGAAAGTAGATACA 57.907 39.130 0.00 0.00 0.00 2.29
339 340 5.353123 TGTTGCGAATTGGGAAAGTAGATAC 59.647 40.000 0.00 0.00 0.00 2.24
340 341 5.492895 TGTTGCGAATTGGGAAAGTAGATA 58.507 37.500 0.00 0.00 0.00 1.98
341 342 4.331968 TGTTGCGAATTGGGAAAGTAGAT 58.668 39.130 0.00 0.00 0.00 1.98
342 343 3.745799 TGTTGCGAATTGGGAAAGTAGA 58.254 40.909 0.00 0.00 0.00 2.59
343 344 4.215399 TCTTGTTGCGAATTGGGAAAGTAG 59.785 41.667 0.00 0.00 0.00 2.57
344 345 4.138290 TCTTGTTGCGAATTGGGAAAGTA 58.862 39.130 0.00 0.00 0.00 2.24
345 346 2.955660 TCTTGTTGCGAATTGGGAAAGT 59.044 40.909 0.00 0.00 0.00 2.66
346 347 3.641437 TCTTGTTGCGAATTGGGAAAG 57.359 42.857 0.00 0.00 0.00 2.62
347 348 3.491792 GGTTCTTGTTGCGAATTGGGAAA 60.492 43.478 0.00 0.00 0.00 3.13
348 349 2.035321 GGTTCTTGTTGCGAATTGGGAA 59.965 45.455 0.00 0.00 0.00 3.97
349 350 1.611491 GGTTCTTGTTGCGAATTGGGA 59.389 47.619 0.00 0.00 0.00 4.37
350 351 1.336795 GGGTTCTTGTTGCGAATTGGG 60.337 52.381 0.00 0.00 0.00 4.12
351 352 1.613437 AGGGTTCTTGTTGCGAATTGG 59.387 47.619 0.00 0.00 0.00 3.16
352 353 3.502211 ACTAGGGTTCTTGTTGCGAATTG 59.498 43.478 0.00 0.00 0.00 2.32
353 354 3.751518 ACTAGGGTTCTTGTTGCGAATT 58.248 40.909 0.00 0.00 0.00 2.17
354 355 3.418684 ACTAGGGTTCTTGTTGCGAAT 57.581 42.857 0.00 0.00 0.00 3.34
355 356 2.922740 ACTAGGGTTCTTGTTGCGAA 57.077 45.000 0.00 0.00 0.00 4.70
356 357 2.762745 GAACTAGGGTTCTTGTTGCGA 58.237 47.619 0.00 0.00 45.90 5.10
357 358 1.459592 CGAACTAGGGTTCTTGTTGCG 59.540 52.381 7.19 0.00 46.84 4.85
358 359 2.479275 GTCGAACTAGGGTTCTTGTTGC 59.521 50.000 7.19 0.00 46.84 4.17
359 360 2.729882 CGTCGAACTAGGGTTCTTGTTG 59.270 50.000 7.19 0.00 46.84 3.33
360 361 2.865276 GCGTCGAACTAGGGTTCTTGTT 60.865 50.000 0.00 0.00 46.84 2.83
361 362 1.336609 GCGTCGAACTAGGGTTCTTGT 60.337 52.381 0.00 0.00 46.84 3.16
362 363 1.067776 AGCGTCGAACTAGGGTTCTTG 60.068 52.381 0.00 0.00 46.84 3.02
363 364 1.201880 GAGCGTCGAACTAGGGTTCTT 59.798 52.381 0.00 0.00 46.84 2.52
364 365 0.810016 GAGCGTCGAACTAGGGTTCT 59.190 55.000 0.00 0.00 46.84 3.01
365 366 0.810016 AGAGCGTCGAACTAGGGTTC 59.190 55.000 0.00 0.00 45.91 3.62
366 367 0.810016 GAGAGCGTCGAACTAGGGTT 59.190 55.000 0.00 0.00 38.52 4.11
367 368 0.035247 AGAGAGCGTCGAACTAGGGT 60.035 55.000 0.00 0.00 0.00 4.34
368 369 0.378962 CAGAGAGCGTCGAACTAGGG 59.621 60.000 0.00 0.00 0.00 3.53
369 370 1.088306 ACAGAGAGCGTCGAACTAGG 58.912 55.000 0.00 0.00 0.00 3.02
370 371 2.904011 AACAGAGAGCGTCGAACTAG 57.096 50.000 0.00 0.00 0.00 2.57
371 372 3.562505 GAAAACAGAGAGCGTCGAACTA 58.437 45.455 0.00 0.00 0.00 2.24
372 373 2.395654 GAAAACAGAGAGCGTCGAACT 58.604 47.619 0.00 0.00 0.00 3.01
373 374 1.122680 CGAAAACAGAGAGCGTCGAAC 59.877 52.381 0.00 0.00 0.00 3.95
374 375 1.268896 ACGAAAACAGAGAGCGTCGAA 60.269 47.619 0.00 0.00 32.98 3.71
375 376 0.309922 ACGAAAACAGAGAGCGTCGA 59.690 50.000 0.00 0.00 32.98 4.20
376 377 1.122680 GAACGAAAACAGAGAGCGTCG 59.877 52.381 0.00 0.00 33.66 5.12
377 378 1.456165 GGAACGAAAACAGAGAGCGTC 59.544 52.381 0.00 0.00 33.66 5.19
378 379 1.068741 AGGAACGAAAACAGAGAGCGT 59.931 47.619 0.00 0.00 36.68 5.07
379 380 1.784525 AGGAACGAAAACAGAGAGCG 58.215 50.000 0.00 0.00 0.00 5.03
380 381 5.864628 ATTTAGGAACGAAAACAGAGAGC 57.135 39.130 0.00 0.00 36.37 4.09
381 382 6.526222 CGAATTTAGGAACGAAAACAGAGAG 58.474 40.000 0.00 0.00 36.37 3.20
382 383 5.107220 GCGAATTTAGGAACGAAAACAGAGA 60.107 40.000 0.00 0.00 36.37 3.10
383 384 5.080068 GCGAATTTAGGAACGAAAACAGAG 58.920 41.667 0.00 0.00 36.37 3.35
384 385 4.753107 AGCGAATTTAGGAACGAAAACAGA 59.247 37.500 0.00 0.00 36.37 3.41
385 386 5.030874 AGCGAATTTAGGAACGAAAACAG 57.969 39.130 0.00 0.00 36.37 3.16
386 387 6.730960 ATAGCGAATTTAGGAACGAAAACA 57.269 33.333 0.00 0.00 36.37 2.83
387 388 7.215755 GTGAATAGCGAATTTAGGAACGAAAAC 59.784 37.037 0.00 0.00 36.37 2.43
388 389 7.095144 TGTGAATAGCGAATTTAGGAACGAAAA 60.095 33.333 0.00 0.00 36.37 2.29
389 390 6.369340 TGTGAATAGCGAATTTAGGAACGAAA 59.631 34.615 0.00 0.00 37.34 3.46
390 391 5.870433 TGTGAATAGCGAATTTAGGAACGAA 59.130 36.000 0.00 0.00 0.00 3.85
391 392 5.412640 TGTGAATAGCGAATTTAGGAACGA 58.587 37.500 0.00 0.00 0.00 3.85
392 393 5.712217 TGTGAATAGCGAATTTAGGAACG 57.288 39.130 0.00 0.00 0.00 3.95
393 394 5.965918 GCTTGTGAATAGCGAATTTAGGAAC 59.034 40.000 0.00 0.00 0.00 3.62
394 395 5.880332 AGCTTGTGAATAGCGAATTTAGGAA 59.120 36.000 0.00 0.00 43.37 3.36
395 396 5.428253 AGCTTGTGAATAGCGAATTTAGGA 58.572 37.500 0.00 0.00 43.37 2.94
396 397 5.741388 AGCTTGTGAATAGCGAATTTAGG 57.259 39.130 0.00 0.00 43.37 2.69
397 398 9.722056 AATTTAGCTTGTGAATAGCGAATTTAG 57.278 29.630 0.00 0.00 43.37 1.85
398 399 9.502145 CAATTTAGCTTGTGAATAGCGAATTTA 57.498 29.630 0.00 0.00 43.37 1.40
399 400 7.009540 GCAATTTAGCTTGTGAATAGCGAATTT 59.990 33.333 0.00 0.00 43.37 1.82
400 401 6.473455 GCAATTTAGCTTGTGAATAGCGAATT 59.527 34.615 0.00 0.00 43.37 2.17
401 402 5.973565 GCAATTTAGCTTGTGAATAGCGAAT 59.026 36.000 0.00 0.00 43.37 3.34
402 403 5.331902 GCAATTTAGCTTGTGAATAGCGAA 58.668 37.500 0.00 0.00 43.37 4.70
403 404 4.494035 CGCAATTTAGCTTGTGAATAGCGA 60.494 41.667 0.00 0.00 43.37 4.93
404 405 3.720818 CGCAATTTAGCTTGTGAATAGCG 59.279 43.478 0.00 0.00 43.37 4.26
405 406 4.662145 ACGCAATTTAGCTTGTGAATAGC 58.338 39.130 3.77 0.00 38.60 2.97
406 407 7.234187 TCTACGCAATTTAGCTTGTGAATAG 57.766 36.000 3.77 0.00 38.60 1.73
407 408 6.257849 CCTCTACGCAATTTAGCTTGTGAATA 59.742 38.462 3.77 0.00 38.60 1.75
408 409 5.065218 CCTCTACGCAATTTAGCTTGTGAAT 59.935 40.000 3.77 0.00 38.60 2.57
409 410 4.391830 CCTCTACGCAATTTAGCTTGTGAA 59.608 41.667 3.77 0.00 38.60 3.18
410 411 3.932710 CCTCTACGCAATTTAGCTTGTGA 59.067 43.478 3.77 0.00 38.60 3.58
411 412 3.932710 TCCTCTACGCAATTTAGCTTGTG 59.067 43.478 0.00 0.00 41.34 3.33
412 413 4.202245 TCCTCTACGCAATTTAGCTTGT 57.798 40.909 0.00 0.00 0.00 3.16
413 414 4.870426 TCTTCCTCTACGCAATTTAGCTTG 59.130 41.667 0.00 0.00 0.00 4.01
414 415 5.086104 TCTTCCTCTACGCAATTTAGCTT 57.914 39.130 0.00 0.00 0.00 3.74
415 416 4.737855 TCTTCCTCTACGCAATTTAGCT 57.262 40.909 0.00 0.00 0.00 3.32
416 417 5.796350 TTTCTTCCTCTACGCAATTTAGC 57.204 39.130 0.00 0.00 0.00 3.09
417 418 8.029642 TCTTTTTCTTCCTCTACGCAATTTAG 57.970 34.615 0.00 0.00 0.00 1.85
418 419 7.119262 CCTCTTTTTCTTCCTCTACGCAATTTA 59.881 37.037 0.00 0.00 0.00 1.40
419 420 6.072452 CCTCTTTTTCTTCCTCTACGCAATTT 60.072 38.462 0.00 0.00 0.00 1.82
420 421 5.412904 CCTCTTTTTCTTCCTCTACGCAATT 59.587 40.000 0.00 0.00 0.00 2.32
421 422 4.938226 CCTCTTTTTCTTCCTCTACGCAAT 59.062 41.667 0.00 0.00 0.00 3.56
422 423 4.202326 ACCTCTTTTTCTTCCTCTACGCAA 60.202 41.667 0.00 0.00 0.00 4.85
423 424 3.323979 ACCTCTTTTTCTTCCTCTACGCA 59.676 43.478 0.00 0.00 0.00 5.24
424 425 3.927854 ACCTCTTTTTCTTCCTCTACGC 58.072 45.455 0.00 0.00 0.00 4.42
425 426 5.577554 GCTTACCTCTTTTTCTTCCTCTACG 59.422 44.000 0.00 0.00 0.00 3.51
426 427 6.465084 TGCTTACCTCTTTTTCTTCCTCTAC 58.535 40.000 0.00 0.00 0.00 2.59
427 428 6.270231 ACTGCTTACCTCTTTTTCTTCCTCTA 59.730 38.462 0.00 0.00 0.00 2.43
431 432 5.531287 TGAACTGCTTACCTCTTTTTCTTCC 59.469 40.000 0.00 0.00 0.00 3.46
602 640 6.015350 CGGTATCTTCCATCTTCTAAAGCCTA 60.015 42.308 0.00 0.00 0.00 3.93
610 648 2.630580 GAGCCGGTATCTTCCATCTTCT 59.369 50.000 1.90 0.00 0.00 2.85
690 728 4.536765 CCACCCTGTCCTAATATTTTGCT 58.463 43.478 0.00 0.00 0.00 3.91
716 754 1.741528 ATACTTTGTAAACGGGCCCG 58.258 50.000 42.17 42.17 46.03 6.13
760 799 8.778358 TGGTGCCATGTTAATTTTGTTTTTATC 58.222 29.630 0.00 0.00 0.00 1.75
856 895 0.031449 GGCCGTGCAGCAAGTTTTTA 59.969 50.000 7.60 0.00 0.00 1.52
874 913 4.559862 ATTCCACTAGACCTTGTCTTGG 57.440 45.455 1.58 5.47 40.28 3.61
930 969 3.668447 CAGCCTAACAAGATGTCTGTGT 58.332 45.455 0.00 0.00 0.00 3.72
939 978 0.771127 AACCCAGCAGCCTAACAAGA 59.229 50.000 0.00 0.00 0.00 3.02
1036 1075 7.731054 ACATTAGCAAATTACTCCAAAAACCA 58.269 30.769 0.00 0.00 0.00 3.67
1284 1327 2.418197 CCTTGCCATGCCAAAATCAGAG 60.418 50.000 0.00 0.00 0.00 3.35
1312 1355 2.293170 TGTTTGAGTGGCATTTGACGA 58.707 42.857 0.00 0.00 0.00 4.20
1318 1361 4.094739 GCTTGTTTTTGTTTGAGTGGCATT 59.905 37.500 0.00 0.00 0.00 3.56
1347 1390 7.224167 GTGTGCTATACTTACTATGTTCCAACC 59.776 40.741 0.00 0.00 0.00 3.77
1366 1409 8.774890 TTAATTGGTAATTTACTCGTGTGCTA 57.225 30.769 6.52 0.00 32.38 3.49
1404 1447 7.762615 ACATGCAATAATCAGAAGGAAAATGTG 59.237 33.333 0.00 0.00 0.00 3.21
1405 1448 7.844009 ACATGCAATAATCAGAAGGAAAATGT 58.156 30.769 0.00 0.00 0.00 2.71
1420 1463 6.543465 CCACTAGGAAAGATGACATGCAATAA 59.457 38.462 0.00 0.00 36.89 1.40
1455 1498 1.656652 CCTCAAATGCGTACTCAGGG 58.343 55.000 0.00 0.00 0.00 4.45
1485 1528 4.761235 ACTGCAAACATCTGACTTGATG 57.239 40.909 0.00 0.00 46.61 3.07
1502 1545 2.562738 AGAAGCAATACCCCAAAACTGC 59.437 45.455 0.00 0.00 0.00 4.40
1611 1654 7.230849 AGAATGCACCAATTTTACAGATTCA 57.769 32.000 0.00 0.00 0.00 2.57
1612 1655 6.470235 CGAGAATGCACCAATTTTACAGATTC 59.530 38.462 0.00 0.00 0.00 2.52
1613 1656 6.150976 TCGAGAATGCACCAATTTTACAGATT 59.849 34.615 0.00 0.00 0.00 2.40
1644 1687 5.269554 AGTCCCCTACAATTCATGGAAAA 57.730 39.130 0.00 0.00 0.00 2.29
1664 1708 8.589701 AATAATACGGGAAAAGAATGGAAAGT 57.410 30.769 0.00 0.00 0.00 2.66
1669 1713 7.745620 AGCTAATAATACGGGAAAAGAATGG 57.254 36.000 0.00 0.00 0.00 3.16
1759 1806 2.110578 GCCATGCCTGAAAATAGGGTT 58.889 47.619 0.00 0.00 38.32 4.11
1763 1810 3.635373 ACATCTGCCATGCCTGAAAATAG 59.365 43.478 0.00 0.00 0.00 1.73
1794 1841 7.561251 TGATCAATGAATTCATGCCATCTTTT 58.439 30.769 21.39 0.54 36.56 2.27
1861 1908 1.271054 ACATCAGTGCCAACCTGAGAC 60.271 52.381 0.00 0.00 41.91 3.36
2071 2118 8.026607 ACACTTTGTAAATGGAATAAATGACCG 58.973 33.333 0.00 0.00 0.00 4.79
2083 2131 6.293407 CCAGTAGTCACACACTTTGTAAATGG 60.293 42.308 0.00 0.00 35.67 3.16
2089 2137 3.906720 ACCAGTAGTCACACACTTTGT 57.093 42.857 0.00 0.00 39.97 2.83
2336 2393 5.061853 GTCTGACGGTAGATAGTATGGTGA 58.938 45.833 0.00 0.00 0.00 4.02
2653 2765 6.772716 TCCAAAGTTTCTGTAGCTCAAGAAAT 59.227 34.615 20.60 8.44 33.63 2.17
2763 2884 1.204146 GAATACTCCCAGTGCTCCCA 58.796 55.000 0.00 0.00 0.00 4.37
2932 3053 4.627467 CACTGTTGTAGCATGTCCTAGTTC 59.373 45.833 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.