Multiple sequence alignment - TraesCS2D01G217900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G217900 chr2D 100.000 6185 0 0 1 6185 181305869 181299685 0.000000e+00 11422.0
1 TraesCS2D01G217900 chr2D 95.122 41 2 0 5777 5817 176105463 176105503 1.440000e-06 65.8
2 TraesCS2D01G217900 chr2D 97.297 37 1 0 5781 5817 584835170 584835206 5.180000e-06 63.9
3 TraesCS2D01G217900 chr2A 92.065 3201 145 48 1897 5037 196517505 196514354 0.000000e+00 4403.0
4 TraesCS2D01G217900 chr2A 93.412 1184 38 14 741 1916 196519327 196518176 0.000000e+00 1718.0
5 TraesCS2D01G217900 chr2A 89.504 705 37 13 5040 5728 196514221 196513538 0.000000e+00 857.0
6 TraesCS2D01G217900 chr2A 95.154 227 10 1 5944 6169 258346740 258346966 2.120000e-94 357.0
7 TraesCS2D01G217900 chr2A 87.209 86 7 3 3248 3329 117530139 117530054 1.840000e-15 95.3
8 TraesCS2D01G217900 chr2B 91.800 1061 56 12 4001 5037 237753053 237752000 0.000000e+00 1448.0
9 TraesCS2D01G217900 chr2B 92.636 774 33 10 603 1372 237759800 237759047 0.000000e+00 1092.0
10 TraesCS2D01G217900 chr2B 81.273 1351 154 35 1946 3241 237757803 237756497 0.000000e+00 1002.0
11 TraesCS2D01G217900 chr2B 91.360 706 37 11 5040 5728 237751830 237751132 0.000000e+00 944.0
12 TraesCS2D01G217900 chr2B 90.230 522 22 9 59 570 237761177 237760675 0.000000e+00 654.0
13 TraesCS2D01G217900 chr2B 85.106 470 52 13 3383 3837 237756388 237755922 1.210000e-126 464.0
14 TraesCS2D01G217900 chr2B 97.619 126 3 0 5827 5952 237751134 237751009 3.750000e-52 217.0
15 TraesCS2D01G217900 chr2B 85.065 154 5 8 1376 1529 237758954 237758819 2.320000e-29 141.0
16 TraesCS2D01G217900 chr2B 87.778 90 10 1 3245 3334 762916545 762916457 3.050000e-18 104.0
17 TraesCS2D01G217900 chr5B 96.413 223 8 0 5946 6168 184283962 184284184 9.790000e-98 368.0
18 TraesCS2D01G217900 chr5B 95.122 41 2 0 5777 5817 130917040 130917080 1.440000e-06 65.8
19 TraesCS2D01G217900 chr7D 95.614 228 10 0 5944 6171 62255599 62255372 3.520000e-97 366.0
20 TraesCS2D01G217900 chr7D 95.175 228 10 1 5944 6171 62232702 62232476 5.890000e-95 359.0
21 TraesCS2D01G217900 chr7D 89.535 86 5 3 3248 3329 249443703 249443788 8.480000e-19 106.0
22 TraesCS2D01G217900 chr6D 96.804 219 7 0 5950 6168 186538817 186539035 3.520000e-97 366.0
23 TraesCS2D01G217900 chr6D 94.760 229 12 0 5940 6168 217732171 217731943 2.120000e-94 357.0
24 TraesCS2D01G217900 chr4A 95.556 225 9 1 5950 6174 511014135 511013912 5.890000e-95 359.0
25 TraesCS2D01G217900 chr4A 85.772 246 26 6 1527 1771 642955665 642955428 1.030000e-62 252.0
26 TraesCS2D01G217900 chr5D 93.724 239 12 3 5931 6168 67293953 67293717 7.630000e-94 355.0
27 TraesCS2D01G217900 chr5D 87.747 253 25 6 1523 1772 57575811 57576060 2.180000e-74 291.0
28 TraesCS2D01G217900 chr5D 88.043 92 6 4 3248 3334 390762879 390762788 3.050000e-18 104.0
29 TraesCS2D01G217900 chr5D 86.585 82 10 1 621 701 485164136 485164217 8.540000e-14 89.8
30 TraesCS2D01G217900 chr4B 93.991 233 12 2 5946 6177 545865873 545866104 9.860000e-93 351.0
31 TraesCS2D01G217900 chr4B 88.710 248 20 6 1523 1768 62974336 62974577 4.690000e-76 296.0
32 TraesCS2D01G217900 chr4B 87.903 248 25 5 1526 1771 396716269 396716025 2.820000e-73 287.0
33 TraesCS2D01G217900 chr4D 89.157 249 21 5 1526 1771 319269851 319269606 7.790000e-79 305.0
34 TraesCS2D01G217900 chr4D 90.698 86 5 3 3246 3328 478990757 478990672 1.820000e-20 111.0
35 TraesCS2D01G217900 chr4D 87.805 82 9 1 621 701 307265914 307265995 1.840000e-15 95.3
36 TraesCS2D01G217900 chrUn 85.830 247 28 5 1527 1770 93157197 93156955 7.960000e-64 255.0
37 TraesCS2D01G217900 chr3D 86.008 243 28 3 1527 1768 158361953 158362190 7.960000e-64 255.0
38 TraesCS2D01G217900 chr3D 92.715 151 9 1 4030 4180 56353173 56353025 3.750000e-52 217.0
39 TraesCS2D01G217900 chr3D 92.405 79 5 1 3245 3323 169888215 169888138 1.820000e-20 111.0
40 TraesCS2D01G217900 chr3D 90.476 84 7 1 3238 3321 169888133 169888215 6.550000e-20 110.0
41 TraesCS2D01G217900 chr3D 87.719 57 3 2 5727 5780 548565502 548565557 5.180000e-06 63.9
42 TraesCS2D01G217900 chr7A 86.192 239 26 6 1530 1765 519171118 519170884 1.030000e-62 252.0
43 TraesCS2D01G217900 chr5A 90.798 163 13 1 4018 4180 425330294 425330134 3.750000e-52 217.0
44 TraesCS2D01G217900 chr7B 90.184 163 14 1 4018 4180 708411531 708411691 1.750000e-50 211.0
45 TraesCS2D01G217900 chr7B 95.122 41 2 0 5777 5817 673996181 673996221 1.440000e-06 65.8
46 TraesCS2D01G217900 chr3A 90.184 163 12 2 4018 4180 614229416 614229574 6.280000e-50 209.0
47 TraesCS2D01G217900 chr6A 89.011 91 6 3 3248 3334 91911616 91911526 6.550000e-20 110.0
48 TraesCS2D01G217900 chr1D 89.535 86 5 3 3248 3329 433017454 433017539 8.480000e-19 106.0
49 TraesCS2D01G217900 chr1D 95.556 45 1 1 5777 5821 349539358 349539315 3.090000e-08 71.3
50 TraesCS2D01G217900 chr1A 85.567 97 11 3 607 701 17829514 17829609 1.420000e-16 99.0
51 TraesCS2D01G217900 chr3B 85.106 94 6 6 5727 5817 808896425 808896513 8.540000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G217900 chr2D 181299685 181305869 6184 True 11422.00 11422 100.000000 1 6185 1 chr2D.!!$R1 6184
1 TraesCS2D01G217900 chr2A 196513538 196519327 5789 True 2326.00 4403 91.660333 741 5728 3 chr2A.!!$R2 4987
2 TraesCS2D01G217900 chr2B 237751009 237761177 10168 True 745.25 1448 89.386125 59 5952 8 chr2B.!!$R2 5893

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 1724 0.107361 CCTAATTCGGTCCACCCACC 60.107 60.0 0.00 0.0 0.00 4.61 F
1826 3139 0.254178 ACTGTAGCAGATTGGCTGGG 59.746 55.0 2.91 0.0 45.44 4.45 F
3719 5900 0.035458 CTTTCTGCAGAACCCGACCT 59.965 55.0 28.46 0.0 33.13 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2403 4487 0.036732 TCTTTTCATCTGCTGCCCGT 59.963 50.0 0.00 0.0 0.0 5.28 R
3749 5935 0.106268 TTGCCAGTTCAAAGCTCCCA 60.106 50.0 0.00 0.0 0.0 4.37 R
5539 10641 0.029035 GCAATGCAGCTGATCTTCCG 59.971 55.0 20.43 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.903682 AACTTTTGAGTGAACATAGATGATTTG 57.096 29.630 0.00 0.00 0.00 2.32
33 34 8.025445 ACTTTTGAGTGAACATAGATGATTTGC 58.975 33.333 0.00 0.00 0.00 3.68
34 35 6.441093 TTGAGTGAACATAGATGATTTGCC 57.559 37.500 0.00 0.00 0.00 4.52
35 36 5.499313 TGAGTGAACATAGATGATTTGCCA 58.501 37.500 0.00 0.00 0.00 4.92
36 37 5.355071 TGAGTGAACATAGATGATTTGCCAC 59.645 40.000 0.00 0.00 0.00 5.01
37 38 5.503927 AGTGAACATAGATGATTTGCCACT 58.496 37.500 0.00 0.00 0.00 4.00
38 39 5.948162 AGTGAACATAGATGATTTGCCACTT 59.052 36.000 0.00 0.00 0.00 3.16
39 40 7.112122 AGTGAACATAGATGATTTGCCACTTA 58.888 34.615 0.00 0.00 0.00 2.24
40 41 7.066284 AGTGAACATAGATGATTTGCCACTTAC 59.934 37.037 0.00 0.00 0.00 2.34
41 42 7.066284 GTGAACATAGATGATTTGCCACTTACT 59.934 37.037 0.00 0.00 0.00 2.24
42 43 7.280876 TGAACATAGATGATTTGCCACTTACTC 59.719 37.037 0.00 0.00 0.00 2.59
43 44 6.893583 ACATAGATGATTTGCCACTTACTCT 58.106 36.000 0.00 0.00 0.00 3.24
44 45 6.765036 ACATAGATGATTTGCCACTTACTCTG 59.235 38.462 0.00 0.00 0.00 3.35
45 46 5.426689 AGATGATTTGCCACTTACTCTGA 57.573 39.130 0.00 0.00 0.00 3.27
46 47 5.181748 AGATGATTTGCCACTTACTCTGAC 58.818 41.667 0.00 0.00 0.00 3.51
47 48 4.623932 TGATTTGCCACTTACTCTGACT 57.376 40.909 0.00 0.00 0.00 3.41
48 49 4.569943 TGATTTGCCACTTACTCTGACTC 58.430 43.478 0.00 0.00 0.00 3.36
49 50 4.284490 TGATTTGCCACTTACTCTGACTCT 59.716 41.667 0.00 0.00 0.00 3.24
50 51 4.689612 TTTGCCACTTACTCTGACTCTT 57.310 40.909 0.00 0.00 0.00 2.85
51 52 5.801531 TTTGCCACTTACTCTGACTCTTA 57.198 39.130 0.00 0.00 0.00 2.10
52 53 6.360370 TTTGCCACTTACTCTGACTCTTAT 57.640 37.500 0.00 0.00 0.00 1.73
53 54 5.330455 TGCCACTTACTCTGACTCTTATG 57.670 43.478 0.00 0.00 0.00 1.90
54 55 4.772624 TGCCACTTACTCTGACTCTTATGT 59.227 41.667 0.00 0.00 0.00 2.29
55 56 5.246203 TGCCACTTACTCTGACTCTTATGTT 59.754 40.000 0.00 0.00 0.00 2.71
56 57 6.166982 GCCACTTACTCTGACTCTTATGTTT 58.833 40.000 0.00 0.00 0.00 2.83
57 58 6.311690 GCCACTTACTCTGACTCTTATGTTTC 59.688 42.308 0.00 0.00 0.00 2.78
61 62 8.421784 ACTTACTCTGACTCTTATGTTTCACAA 58.578 33.333 0.00 0.00 0.00 3.33
74 75 9.840427 CTTATGTTTCACAAATTACCCTAACAG 57.160 33.333 0.00 0.00 0.00 3.16
152 153 5.690865 AGACAGAAAATTTGGGTAGACACA 58.309 37.500 0.00 0.00 0.00 3.72
153 154 6.306987 AGACAGAAAATTTGGGTAGACACAT 58.693 36.000 0.00 0.00 0.00 3.21
154 155 6.777580 AGACAGAAAATTTGGGTAGACACATT 59.222 34.615 0.00 0.00 0.00 2.71
155 156 7.287696 AGACAGAAAATTTGGGTAGACACATTT 59.712 33.333 0.00 0.00 33.50 2.32
157 158 6.868339 CAGAAAATTTGGGTAGACACATTTCC 59.132 38.462 6.06 0.00 31.56 3.13
160 161 0.996583 TGGGTAGACACATTTCCCCC 59.003 55.000 0.00 0.00 37.52 5.40
175 176 2.986492 CCCCCTCCTTACAACGAGA 58.014 57.895 0.00 0.00 0.00 4.04
176 177 0.824759 CCCCCTCCTTACAACGAGAG 59.175 60.000 0.00 0.00 0.00 3.20
212 213 0.891373 ACTCCACTCAGACGTGATGG 59.109 55.000 0.00 0.00 37.06 3.51
221 222 0.534412 AGACGTGATGGAAGGCTCAG 59.466 55.000 0.00 0.00 0.00 3.35
228 229 0.540923 ATGGAAGGCTCAGCTGACTC 59.459 55.000 13.74 7.89 0.00 3.36
232 233 0.607620 AAGGCTCAGCTGACTCAGTC 59.392 55.000 13.74 4.55 33.43 3.51
250 260 3.305361 CAGTCATCGTGCTCAATAGTGTG 59.695 47.826 0.00 0.00 0.00 3.82
259 269 2.143122 CTCAATAGTGTGGTGCGTGTT 58.857 47.619 0.00 0.00 0.00 3.32
279 289 1.337703 TGCACTGTTCTGGAATGCAAC 59.662 47.619 7.39 0.00 43.00 4.17
280 290 1.337703 GCACTGTTCTGGAATGCAACA 59.662 47.619 0.00 0.00 36.30 3.33
281 291 2.029649 GCACTGTTCTGGAATGCAACAT 60.030 45.455 0.00 0.00 36.30 2.71
354 364 3.062639 GTGACGTTGGAAGCTATCACATG 59.937 47.826 0.00 0.00 37.11 3.21
372 382 1.289160 TGTAGAGAGGGCTTGGCATT 58.711 50.000 0.00 0.00 0.00 3.56
413 424 4.624015 ACAAAATGTTGTCATTGCCTCTG 58.376 39.130 0.00 0.00 45.00 3.35
423 434 2.011947 CATTGCCTCTGATTCGAAGCA 58.988 47.619 16.26 16.26 0.00 3.91
464 475 3.261818 AAGGTAGTAGGGGAGGCTATG 57.738 52.381 0.00 0.00 0.00 2.23
503 514 6.099413 TGAGATCAAACTGAGAGCATTATCCT 59.901 38.462 0.00 0.00 0.00 3.24
570 581 4.268884 CGCAGATAGACTAGCCAAGTTTTC 59.731 45.833 0.00 0.00 39.07 2.29
571 582 5.178797 GCAGATAGACTAGCCAAGTTTTCA 58.821 41.667 0.00 0.00 39.07 2.69
572 583 5.064071 GCAGATAGACTAGCCAAGTTTTCAC 59.936 44.000 0.00 0.00 39.07 3.18
573 584 6.166279 CAGATAGACTAGCCAAGTTTTCACA 58.834 40.000 0.00 0.00 39.07 3.58
575 586 7.335422 CAGATAGACTAGCCAAGTTTTCACATT 59.665 37.037 0.00 0.00 39.07 2.71
576 587 5.948992 AGACTAGCCAAGTTTTCACATTC 57.051 39.130 0.00 0.00 39.07 2.67
577 588 4.762251 AGACTAGCCAAGTTTTCACATTCC 59.238 41.667 0.00 0.00 39.07 3.01
578 589 4.729868 ACTAGCCAAGTTTTCACATTCCT 58.270 39.130 0.00 0.00 33.35 3.36
579 590 5.140454 ACTAGCCAAGTTTTCACATTCCTT 58.860 37.500 0.00 0.00 33.35 3.36
584 595 5.261209 CAAGTTTTCACATTCCTTGGACA 57.739 39.130 0.00 0.00 31.19 4.02
585 596 5.846203 CAAGTTTTCACATTCCTTGGACAT 58.154 37.500 0.00 0.00 31.19 3.06
586 597 6.282930 CAAGTTTTCACATTCCTTGGACATT 58.717 36.000 0.00 0.00 31.19 2.71
587 598 6.484364 AGTTTTCACATTCCTTGGACATTT 57.516 33.333 0.00 0.00 0.00 2.32
588 599 6.888105 AGTTTTCACATTCCTTGGACATTTT 58.112 32.000 0.00 0.00 0.00 1.82
589 600 7.337938 AGTTTTCACATTCCTTGGACATTTTT 58.662 30.769 0.00 0.00 0.00 1.94
640 1493 0.734889 GGAGGCATGTTTGGATGTCG 59.265 55.000 0.00 0.00 32.92 4.35
643 1496 1.280710 AGGCATGTTTGGATGTCGGTA 59.719 47.619 0.00 0.00 32.92 4.02
782 1635 4.398319 AGATCTAATGTTATTTGGGCCGG 58.602 43.478 0.00 0.00 0.00 6.13
870 1723 0.746923 GCCTAATTCGGTCCACCCAC 60.747 60.000 0.00 0.00 0.00 4.61
871 1724 0.107361 CCTAATTCGGTCCACCCACC 60.107 60.000 0.00 0.00 0.00 4.61
873 1726 0.616371 TAATTCGGTCCACCCACCAG 59.384 55.000 0.00 0.00 36.01 4.00
874 1727 1.131303 AATTCGGTCCACCCACCAGA 61.131 55.000 0.00 0.00 36.01 3.86
875 1728 0.914417 ATTCGGTCCACCCACCAGAT 60.914 55.000 0.00 0.00 36.01 2.90
876 1729 1.131303 TTCGGTCCACCCACCAGATT 61.131 55.000 0.00 0.00 36.01 2.40
877 1730 1.377202 CGGTCCACCCACCAGATTG 60.377 63.158 0.00 0.00 36.01 2.67
878 1731 1.000896 GGTCCACCCACCAGATTGG 60.001 63.158 0.00 0.00 45.02 3.16
879 1732 1.678970 GTCCACCCACCAGATTGGC 60.679 63.158 0.00 0.00 42.67 4.52
880 1733 2.362889 CCACCCACCAGATTGGCC 60.363 66.667 0.00 0.00 42.67 5.36
881 1734 2.765969 CACCCACCAGATTGGCCT 59.234 61.111 3.32 0.00 42.67 5.19
882 1735 1.077265 CACCCACCAGATTGGCCTT 59.923 57.895 3.32 0.00 42.67 4.35
883 1736 1.077265 ACCCACCAGATTGGCCTTG 59.923 57.895 3.32 0.00 42.67 3.61
1206 2063 6.676950 TGCTGTAAAATCCACTGTATTGTTG 58.323 36.000 0.00 0.00 0.00 3.33
1211 2068 6.655078 AAAATCCACTGTATTGTTGCTTCT 57.345 33.333 0.00 0.00 0.00 2.85
1287 2144 4.742743 GCGTGGGAAGCTATTATTACCTGT 60.743 45.833 0.00 0.00 31.28 4.00
1324 2181 6.348132 CCGATTGTCACTGTATTTTTGCTACA 60.348 38.462 0.00 0.00 0.00 2.74
1334 2191 0.660488 TTTTGCTACAGTGCCGTGTG 59.340 50.000 0.00 0.00 31.46 3.82
1341 2198 0.320421 ACAGTGCCGTGTGGATGTAC 60.320 55.000 0.00 0.00 37.49 2.90
1492 2438 5.348724 CAGCGTACAACAGAGAACATACATT 59.651 40.000 0.00 0.00 0.00 2.71
1577 2523 3.011517 AAGCACTCCGGCCCTGAT 61.012 61.111 0.00 0.00 0.00 2.90
1578 2524 3.335356 AAGCACTCCGGCCCTGATG 62.335 63.158 0.00 0.00 0.00 3.07
1676 2622 1.696063 AGTTGCCATGCTTGACAACT 58.304 45.000 22.89 22.89 45.86 3.16
1808 3121 7.823149 AGACACGGTAGTCAACATTATAAAC 57.177 36.000 11.43 0.00 40.98 2.01
1826 3139 0.254178 ACTGTAGCAGATTGGCTGGG 59.746 55.000 2.91 0.00 45.44 4.45
1828 3141 0.698238 TGTAGCAGATTGGCTGGGTT 59.302 50.000 0.00 0.00 45.44 4.11
1830 3143 2.307392 TGTAGCAGATTGGCTGGGTTAA 59.693 45.455 0.00 0.00 45.44 2.01
1909 3231 4.620982 TCATATCATCGTCGCATGTTCTT 58.379 39.130 0.00 0.00 0.00 2.52
1957 3994 8.899427 TTTCCATCTTATTTTGCATGTTTTGA 57.101 26.923 0.00 0.00 0.00 2.69
1967 4004 5.843673 TTGCATGTTTTGAGTTCCTGTTA 57.156 34.783 0.00 0.00 0.00 2.41
1996 4033 9.423061 GTAATGTGCTGTCTGGAATAAAAATTT 57.577 29.630 0.00 0.00 0.00 1.82
2056 4094 5.189736 AGACAGTTAGCCCATGAAAGTATGA 59.810 40.000 0.00 0.00 0.00 2.15
2403 4487 0.324738 AGTAGCTGCTGCCTCTACCA 60.325 55.000 13.43 0.00 40.80 3.25
2446 4530 1.066914 CTGCTGACTTCGTCTCTTGC 58.933 55.000 0.00 0.00 33.15 4.01
2514 4598 4.824289 CAATGCTAGCCAAAGGAAACATT 58.176 39.130 13.29 0.00 0.00 2.71
2552 4636 1.672881 CGGCCTTTTAGAGATTGGCAG 59.327 52.381 0.00 0.00 44.85 4.85
2565 4649 1.785353 TTGGCAGGGGAAGGTGGTAC 61.785 60.000 0.00 0.00 0.00 3.34
2567 4651 2.987125 CAGGGGAAGGTGGTACGG 59.013 66.667 0.00 0.00 0.00 4.02
2568 4652 3.007323 AGGGGAAGGTGGTACGGC 61.007 66.667 0.00 0.00 0.00 5.68
2569 4653 4.105553 GGGGAAGGTGGTACGGCC 62.106 72.222 0.00 0.00 37.90 6.13
2570 4654 3.324108 GGGAAGGTGGTACGGCCA 61.324 66.667 2.24 0.00 46.95 5.36
2716 4800 4.230041 AGGGAGTGACTAAACTAGGCTAGA 59.770 45.833 27.59 4.89 33.94 2.43
2752 4836 1.555075 ACGCCAGTGATATTGTGGACT 59.445 47.619 0.00 0.00 32.60 3.85
2753 4837 2.027192 ACGCCAGTGATATTGTGGACTT 60.027 45.455 0.00 0.00 32.60 3.01
2754 4838 2.352651 CGCCAGTGATATTGTGGACTTG 59.647 50.000 0.00 0.00 32.60 3.16
2761 4845 7.050377 CAGTGATATTGTGGACTTGGTCTAAT 58.950 38.462 0.00 0.00 32.47 1.73
2788 4872 1.827399 TTGCCTGACCGACCTTCCTC 61.827 60.000 0.00 0.00 0.00 3.71
2796 4880 2.686915 GACCGACCTTCCTCGATTCTTA 59.313 50.000 0.00 0.00 35.58 2.10
2905 4989 2.171940 CAAACTCTGCTGTCGCGC 59.828 61.111 0.00 0.00 39.65 6.86
3019 5103 7.444487 GGAGTGTGTAACCAAGAAGTTTAAGAT 59.556 37.037 0.00 0.00 34.36 2.40
3049 5166 0.753262 ACTCCAAGCGACAAGACAGT 59.247 50.000 0.00 0.00 0.00 3.55
3050 5167 1.143305 CTCCAAGCGACAAGACAGTG 58.857 55.000 0.00 0.00 0.00 3.66
3051 5168 0.880278 TCCAAGCGACAAGACAGTGC 60.880 55.000 0.00 0.00 0.00 4.40
3063 5180 4.960866 CAGTGCCTGCCTGCCACA 62.961 66.667 0.00 0.00 0.00 4.17
3099 5216 1.304381 GAGGAGGGCACAATGGCAA 60.304 57.895 4.66 0.00 45.76 4.52
3101 5218 0.974010 AGGAGGGCACAATGGCAATG 60.974 55.000 0.00 0.00 45.76 2.82
3164 5281 4.645762 TCATGTGATACACTGAGAGAGC 57.354 45.455 0.00 0.00 35.11 4.09
3177 5294 0.461693 AGAGAGCGGAGAAGCATTGC 60.462 55.000 0.00 0.00 40.15 3.56
3189 5306 1.226491 GCATTGCCGTGATGAGCAC 60.226 57.895 0.00 0.00 44.21 4.40
3223 5341 2.290260 CCTGGTCACCATGCTTGTCTTA 60.290 50.000 0.00 0.00 30.82 2.10
3230 5348 3.569701 CACCATGCTTGTCTTACAGGTTT 59.430 43.478 0.00 0.00 0.00 3.27
3250 5368 3.955524 TGGAGCTTAGCTAGTACTCCT 57.044 47.619 26.38 0.00 45.86 3.69
3259 5377 7.562088 AGCTTAGCTAGTACTCCTTCTGTAAAT 59.438 37.037 4.30 0.00 36.99 1.40
3260 5378 8.198778 GCTTAGCTAGTACTCCTTCTGTAAATT 58.801 37.037 0.00 0.00 0.00 1.82
3305 5423 9.464714 TCACTGATCTAAACGCTCTTATATTTC 57.535 33.333 0.00 0.00 0.00 2.17
3346 5464 6.677781 TTATTTATTGAGTTTCTGGAGCCG 57.322 37.500 0.00 0.00 0.00 5.52
3400 5565 3.086600 GCTGGAGGGCTAGCTGGT 61.087 66.667 15.72 0.00 44.39 4.00
3414 5579 4.500716 GCTAGCTGGTTATTCTCCTCAGAC 60.501 50.000 7.70 0.00 0.00 3.51
3498 5663 0.107654 GGTCTAGTGGGTGTGATGGC 60.108 60.000 0.00 0.00 0.00 4.40
3534 5699 1.226773 GCATTCACCGCATCAAGGC 60.227 57.895 0.00 0.00 0.00 4.35
3719 5900 0.035458 CTTTCTGCAGAACCCGACCT 59.965 55.000 28.46 0.00 33.13 3.85
3722 5903 1.374758 CTGCAGAACCCGACCTGTC 60.375 63.158 8.42 0.00 33.19 3.51
3823 6009 4.996434 ACTGAGGCGTGGCAGCAC 62.996 66.667 10.33 5.32 39.27 4.40
3838 6072 2.541588 GCAGCACGTTGAACACAAAGAT 60.542 45.455 0.00 0.00 0.00 2.40
3922 6156 2.497273 GCACCACAATTCCTTAGGCATT 59.503 45.455 0.00 0.00 0.00 3.56
3927 6165 4.931002 CCACAATTCCTTAGGCATTTGTTG 59.069 41.667 9.47 4.80 0.00 3.33
3942 6180 1.618487 TGTTGCATTGCCACATGAGA 58.382 45.000 11.21 0.00 29.30 3.27
3944 6182 2.364647 TGTTGCATTGCCACATGAGAAA 59.635 40.909 11.21 0.00 29.30 2.52
3945 6183 3.007074 TGTTGCATTGCCACATGAGAAAT 59.993 39.130 11.21 0.00 29.30 2.17
3947 6185 2.563620 TGCATTGCCACATGAGAAATGT 59.436 40.909 17.17 0.00 32.15 2.71
3948 6186 3.007074 TGCATTGCCACATGAGAAATGTT 59.993 39.130 17.17 0.00 32.15 2.71
3950 6188 4.142988 GCATTGCCACATGAGAAATGTTTG 60.143 41.667 17.17 1.27 32.15 2.93
3951 6189 3.663995 TGCCACATGAGAAATGTTTGG 57.336 42.857 0.00 0.00 0.00 3.28
3966 6204 1.077169 GTTTGGGAGAACAGGGGGAAT 59.923 52.381 0.00 0.00 0.00 3.01
3995 6233 3.321682 CCACCCGTAATACCCGAAATAGA 59.678 47.826 0.00 0.00 0.00 1.98
4005 8896 7.845066 AATACCCGAAATAGACTCAAACTTC 57.155 36.000 0.00 0.00 0.00 3.01
4076 8967 3.761897 TGTAGCAGCCACATTTTACCTT 58.238 40.909 0.00 0.00 0.00 3.50
4158 9066 6.199557 TGTATGTATTTGGTCCAGGCATAT 57.800 37.500 0.00 0.00 0.00 1.78
4159 9067 7.323052 TGTATGTATTTGGTCCAGGCATATA 57.677 36.000 0.00 0.00 0.00 0.86
4170 9078 6.932400 TGGTCCAGGCATATACTATTTTAACG 59.068 38.462 0.00 0.00 0.00 3.18
4303 9218 6.671779 TGGGAAATATTATGGTCAAAAGCCTT 59.328 34.615 0.00 0.00 0.00 4.35
4317 9232 5.048504 TCAAAAGCCTTTAACTGATGAGCTG 60.049 40.000 0.00 0.00 0.00 4.24
4509 9424 6.591935 TCTTCACTACAGTTTCCTTTCATGT 58.408 36.000 0.00 0.00 0.00 3.21
4593 9509 5.183331 GGGTTCTTTGATTTTCTGTAGTCCC 59.817 44.000 0.00 0.00 0.00 4.46
4637 9553 5.327616 TCATGTGGTTTGAATGCCAATAG 57.672 39.130 0.00 0.00 36.41 1.73
4645 9561 6.873076 TGGTTTGAATGCCAATAGTTCATTTC 59.127 34.615 0.00 0.00 34.23 2.17
4949 9868 3.728864 GCTTTGTGAGATATGCAACCGTG 60.729 47.826 0.00 0.00 0.00 4.94
5051 10140 6.878317 TGGTTCATGGACTTAATCTACTCTG 58.122 40.000 3.62 0.00 0.00 3.35
5052 10141 6.667848 TGGTTCATGGACTTAATCTACTCTGA 59.332 38.462 3.62 0.00 0.00 3.27
5054 10143 8.861086 GGTTCATGGACTTAATCTACTCTGATA 58.139 37.037 3.62 0.00 0.00 2.15
5055 10144 9.685828 GTTCATGGACTTAATCTACTCTGATAC 57.314 37.037 0.00 0.00 0.00 2.24
5056 10145 9.647918 TTCATGGACTTAATCTACTCTGATACT 57.352 33.333 0.00 0.00 0.00 2.12
5059 10148 8.624367 TGGACTTAATCTACTCTGATACTAGC 57.376 38.462 0.00 0.00 0.00 3.42
5063 10154 5.608798 AATCTACTCTGATACTAGCCCCT 57.391 43.478 0.00 0.00 0.00 4.79
5148 10239 3.818787 CAGCCGCCACAATCAGCC 61.819 66.667 0.00 0.00 0.00 4.85
5216 10307 3.935203 TCGATCAGAAATGGCTTGTTCTC 59.065 43.478 0.00 0.00 31.66 2.87
5303 10396 2.396590 TGGTCGCTTGAACTATTCCC 57.603 50.000 0.00 0.00 0.00 3.97
5321 10414 2.498481 TCCCAGTACGGTTATGGACTTG 59.502 50.000 11.64 0.00 36.09 3.16
5381 10474 3.930848 GGCTAATGCTACTTTGTGTACGT 59.069 43.478 0.00 0.00 39.59 3.57
5382 10475 4.201685 GGCTAATGCTACTTTGTGTACGTG 60.202 45.833 0.00 0.00 39.59 4.49
5383 10476 4.387862 GCTAATGCTACTTTGTGTACGTGT 59.612 41.667 0.00 0.00 36.03 4.49
5384 10477 4.725556 AATGCTACTTTGTGTACGTGTG 57.274 40.909 0.00 0.00 0.00 3.82
5409 10502 4.090930 GTGTGTAACTGTAACATACGCCAG 59.909 45.833 0.00 0.00 38.04 4.85
5410 10503 3.061697 GTGTAACTGTAACATACGCCAGC 59.938 47.826 0.00 0.00 0.00 4.85
5423 10516 5.639506 ACATACGCCAGCAGCTATAATTTAG 59.360 40.000 0.00 0.00 40.39 1.85
5455 10548 9.940166 CGTTACATATACAATCAGTGTGTACTA 57.060 33.333 0.00 0.00 41.89 1.82
5475 10568 0.891373 GCAGTCAGGCTCTGTACAGA 59.109 55.000 23.80 23.80 35.60 3.41
5476 10569 1.273606 GCAGTCAGGCTCTGTACAGAA 59.726 52.381 25.14 8.51 36.94 3.02
5477 10570 2.289072 GCAGTCAGGCTCTGTACAGAAA 60.289 50.000 25.14 5.58 36.94 2.52
5478 10571 3.583806 CAGTCAGGCTCTGTACAGAAAG 58.416 50.000 25.14 16.04 36.94 2.62
5479 10572 2.028567 AGTCAGGCTCTGTACAGAAAGC 60.029 50.000 25.14 23.73 36.94 3.51
5509 10610 4.511454 TGTGTTTGTGTCTATGCAGTCTTC 59.489 41.667 0.00 0.00 0.00 2.87
5709 10823 7.385894 AACTATCAGCTATTCAGGGAGAAAT 57.614 36.000 0.00 0.00 40.22 2.17
5736 10850 7.911130 AACTAGTAACTTTATACTCCCCTCC 57.089 40.000 0.00 0.00 37.34 4.30
5737 10851 6.067350 ACTAGTAACTTTATACTCCCCTCCG 58.933 44.000 0.00 0.00 37.34 4.63
5738 10852 4.876580 AGTAACTTTATACTCCCCTCCGT 58.123 43.478 0.00 0.00 30.26 4.69
5739 10853 4.892345 AGTAACTTTATACTCCCCTCCGTC 59.108 45.833 0.00 0.00 30.26 4.79
5740 10854 2.675583 ACTTTATACTCCCCTCCGTCC 58.324 52.381 0.00 0.00 0.00 4.79
5741 10855 1.612463 CTTTATACTCCCCTCCGTCCG 59.388 57.143 0.00 0.00 0.00 4.79
5742 10856 0.846015 TTATACTCCCCTCCGTCCGA 59.154 55.000 0.00 0.00 0.00 4.55
5743 10857 0.846015 TATACTCCCCTCCGTCCGAA 59.154 55.000 0.00 0.00 0.00 4.30
5744 10858 0.032813 ATACTCCCCTCCGTCCGAAA 60.033 55.000 0.00 0.00 0.00 3.46
5745 10859 0.251742 TACTCCCCTCCGTCCGAAAA 60.252 55.000 0.00 0.00 0.00 2.29
5746 10860 1.123246 ACTCCCCTCCGTCCGAAAAA 61.123 55.000 0.00 0.00 0.00 1.94
5747 10861 0.391263 CTCCCCTCCGTCCGAAAAAG 60.391 60.000 0.00 0.00 0.00 2.27
5748 10862 2.038837 CCCCTCCGTCCGAAAAAGC 61.039 63.158 0.00 0.00 0.00 3.51
5749 10863 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
5750 10864 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
5751 10865 0.796927 CCTCCGTCCGAAAAAGCTTC 59.203 55.000 0.00 0.00 0.00 3.86
5752 10866 0.796927 CTCCGTCCGAAAAAGCTTCC 59.203 55.000 0.00 0.00 0.00 3.46
5753 10867 0.395312 TCCGTCCGAAAAAGCTTCCT 59.605 50.000 0.00 0.00 0.00 3.36
5754 10868 0.796927 CCGTCCGAAAAAGCTTCCTC 59.203 55.000 0.00 0.00 0.00 3.71
5755 10869 1.508632 CGTCCGAAAAAGCTTCCTCA 58.491 50.000 0.00 0.00 0.00 3.86
5756 10870 1.871039 CGTCCGAAAAAGCTTCCTCAA 59.129 47.619 0.00 0.00 0.00 3.02
5757 10871 2.289547 CGTCCGAAAAAGCTTCCTCAAA 59.710 45.455 0.00 0.00 0.00 2.69
5758 10872 3.058224 CGTCCGAAAAAGCTTCCTCAAAT 60.058 43.478 0.00 0.00 0.00 2.32
5759 10873 4.229876 GTCCGAAAAAGCTTCCTCAAATG 58.770 43.478 0.00 0.00 0.00 2.32
5760 10874 3.255642 TCCGAAAAAGCTTCCTCAAATGG 59.744 43.478 0.00 0.00 0.00 3.16
5761 10875 3.255642 CCGAAAAAGCTTCCTCAAATGGA 59.744 43.478 0.00 0.00 0.00 3.41
5762 10876 4.082026 CCGAAAAAGCTTCCTCAAATGGAT 60.082 41.667 0.00 0.00 35.83 3.41
5763 10877 4.860907 CGAAAAAGCTTCCTCAAATGGATG 59.139 41.667 0.00 0.00 35.83 3.51
5764 10878 5.565439 CGAAAAAGCTTCCTCAAATGGATGT 60.565 40.000 0.00 0.00 35.83 3.06
5765 10879 6.349280 CGAAAAAGCTTCCTCAAATGGATGTA 60.349 38.462 0.00 0.00 35.83 2.29
5766 10880 7.486407 AAAAAGCTTCCTCAAATGGATGTAT 57.514 32.000 0.00 0.00 35.83 2.29
5767 10881 6.705863 AAAGCTTCCTCAAATGGATGTATC 57.294 37.500 0.00 0.00 35.83 2.24
5768 10882 5.643421 AGCTTCCTCAAATGGATGTATCT 57.357 39.130 0.00 0.00 35.83 1.98
5769 10883 6.753913 AGCTTCCTCAAATGGATGTATCTA 57.246 37.500 0.00 0.00 35.83 1.98
5770 10884 6.767456 AGCTTCCTCAAATGGATGTATCTAG 58.233 40.000 0.00 0.00 35.83 2.43
5771 10885 5.411053 GCTTCCTCAAATGGATGTATCTAGC 59.589 44.000 0.00 0.00 35.83 3.42
5772 10886 6.499106 TTCCTCAAATGGATGTATCTAGCA 57.501 37.500 0.00 0.00 35.83 3.49
5773 10887 5.858381 TCCTCAAATGGATGTATCTAGCAC 58.142 41.667 0.00 0.00 0.00 4.40
5774 10888 5.604231 TCCTCAAATGGATGTATCTAGCACT 59.396 40.000 0.00 0.00 0.00 4.40
5775 10889 6.100279 TCCTCAAATGGATGTATCTAGCACTT 59.900 38.462 0.00 0.00 0.00 3.16
5776 10890 7.290014 TCCTCAAATGGATGTATCTAGCACTTA 59.710 37.037 0.00 0.00 0.00 2.24
5777 10891 7.601886 CCTCAAATGGATGTATCTAGCACTTAG 59.398 40.741 0.00 0.00 0.00 2.18
5778 10892 7.445121 TCAAATGGATGTATCTAGCACTTAGG 58.555 38.462 0.00 0.00 0.00 2.69
5779 10893 7.290014 TCAAATGGATGTATCTAGCACTTAGGA 59.710 37.037 0.00 0.00 0.00 2.94
5780 10894 7.618019 AATGGATGTATCTAGCACTTAGGAA 57.382 36.000 0.00 0.00 0.00 3.36
5781 10895 6.406692 TGGATGTATCTAGCACTTAGGAAC 57.593 41.667 0.00 0.00 0.00 3.62
5782 10896 5.897250 TGGATGTATCTAGCACTTAGGAACA 59.103 40.000 0.00 0.00 32.61 3.18
5783 10897 6.382859 TGGATGTATCTAGCACTTAGGAACAA 59.617 38.462 0.00 0.00 32.17 2.83
5784 10898 7.093068 TGGATGTATCTAGCACTTAGGAACAAA 60.093 37.037 0.00 0.00 32.17 2.83
5785 10899 7.224949 GGATGTATCTAGCACTTAGGAACAAAC 59.775 40.741 0.00 0.00 32.17 2.93
5786 10900 7.241042 TGTATCTAGCACTTAGGAACAAACT 57.759 36.000 0.00 0.00 0.00 2.66
5787 10901 7.676947 TGTATCTAGCACTTAGGAACAAACTT 58.323 34.615 0.00 0.00 0.00 2.66
5788 10902 7.602644 TGTATCTAGCACTTAGGAACAAACTTG 59.397 37.037 0.00 0.00 0.00 3.16
5789 10903 5.305585 TCTAGCACTTAGGAACAAACTTGG 58.694 41.667 0.00 0.00 0.00 3.61
5790 10904 3.222603 AGCACTTAGGAACAAACTTGGG 58.777 45.455 0.00 0.00 0.00 4.12
5791 10905 3.117663 AGCACTTAGGAACAAACTTGGGA 60.118 43.478 0.00 0.00 0.00 4.37
5792 10906 3.004419 GCACTTAGGAACAAACTTGGGAC 59.996 47.826 0.00 0.00 0.00 4.46
5793 10907 4.204012 CACTTAGGAACAAACTTGGGACA 58.796 43.478 0.00 0.00 0.00 4.02
5815 10929 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
5816 10930 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
5817 10931 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
5818 10932 2.734755 TTTCGGACGGAGGGAGTATA 57.265 50.000 0.00 0.00 0.00 1.47
5819 10933 2.965671 TTCGGACGGAGGGAGTATAT 57.034 50.000 0.00 0.00 0.00 0.86
5820 10934 4.371624 TTTCGGACGGAGGGAGTATATA 57.628 45.455 0.00 0.00 0.00 0.86
5821 10935 4.581309 TTCGGACGGAGGGAGTATATAT 57.419 45.455 0.00 0.00 0.00 0.86
5822 10936 5.698741 TTCGGACGGAGGGAGTATATATA 57.301 43.478 0.00 0.00 0.00 0.86
5823 10937 5.901413 TCGGACGGAGGGAGTATATATAT 57.099 43.478 0.00 0.00 0.00 0.86
5824 10938 7.379059 TTCGGACGGAGGGAGTATATATATA 57.621 40.000 0.00 0.00 0.00 0.86
5825 10939 7.379059 TCGGACGGAGGGAGTATATATATAA 57.621 40.000 3.96 0.00 0.00 0.98
5826 10940 7.805163 TCGGACGGAGGGAGTATATATATAAA 58.195 38.462 3.96 0.00 0.00 1.40
5867 10981 6.842437 TTAAGTCAGCAGTAGAGAATGAGT 57.158 37.500 0.00 0.00 0.00 3.41
5930 11044 3.383092 GAGCCTCAGATCCAGCAAG 57.617 57.895 0.00 0.00 0.00 4.01
5952 11066 7.560368 CAAGTCAAGATGGGAGAAATAGTACT 58.440 38.462 0.00 0.00 0.00 2.73
5953 11067 8.696374 CAAGTCAAGATGGGAGAAATAGTACTA 58.304 37.037 4.77 4.77 0.00 1.82
5954 11068 8.240267 AGTCAAGATGGGAGAAATAGTACTAC 57.760 38.462 4.31 0.00 0.00 2.73
5955 11069 7.288158 AGTCAAGATGGGAGAAATAGTACTACC 59.712 40.741 4.31 1.21 37.61 3.18
5956 11070 7.288158 GTCAAGATGGGAGAAATAGTACTACCT 59.712 40.741 4.31 2.97 37.94 3.08
5957 11071 7.506261 TCAAGATGGGAGAAATAGTACTACCTC 59.494 40.741 4.31 11.55 37.94 3.85
5958 11072 6.316513 AGATGGGAGAAATAGTACTACCTCC 58.683 44.000 25.29 25.29 37.94 4.30
5959 11073 4.467769 TGGGAGAAATAGTACTACCTCCG 58.532 47.826 25.73 0.00 40.67 4.63
5960 11074 4.079558 TGGGAGAAATAGTACTACCTCCGT 60.080 45.833 25.73 4.35 40.67 4.69
5961 11075 4.518590 GGGAGAAATAGTACTACCTCCGTC 59.481 50.000 25.73 16.91 40.67 4.79
5962 11076 5.375773 GGAGAAATAGTACTACCTCCGTCT 58.624 45.833 21.98 12.28 32.06 4.18
5963 11077 6.465035 GGGAGAAATAGTACTACCTCCGTCTA 60.465 46.154 25.73 0.86 40.67 2.59
5964 11078 6.650390 GGAGAAATAGTACTACCTCCGTCTAG 59.350 46.154 21.98 0.00 32.06 2.43
5965 11079 6.532826 AGAAATAGTACTACCTCCGTCTAGG 58.467 44.000 4.31 0.00 42.82 3.02
5975 11089 4.571372 CCTCCGTCTAGGTGAATAAGTC 57.429 50.000 0.00 0.00 41.99 3.01
5976 11090 3.952323 CCTCCGTCTAGGTGAATAAGTCA 59.048 47.826 0.00 0.00 41.99 3.41
5977 11091 4.585162 CCTCCGTCTAGGTGAATAAGTCAT 59.415 45.833 0.00 0.00 38.90 3.06
5978 11092 5.069251 CCTCCGTCTAGGTGAATAAGTCATT 59.931 44.000 0.00 0.00 38.90 2.57
5979 11093 6.145338 TCCGTCTAGGTGAATAAGTCATTC 57.855 41.667 0.00 0.00 40.27 2.67
5980 11094 4.976731 CCGTCTAGGTGAATAAGTCATTCG 59.023 45.833 0.00 0.00 45.25 3.34
5987 11101 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
5988 11102 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
5989 11103 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
5990 11104 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
5991 11105 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
5992 11106 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
5993 11107 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
5994 11108 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
5995 11109 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
5996 11110 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
5997 11111 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
5998 11112 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
5999 11113 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
6000 11114 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
6001 11115 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
6002 11116 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
6003 11117 4.441415 GCGTAGTTCTAGGTCATCGATTTG 59.559 45.833 0.00 0.00 0.00 2.32
6004 11118 5.732528 GCGTAGTTCTAGGTCATCGATTTGA 60.733 44.000 0.00 0.00 0.00 2.69
6005 11119 6.439599 CGTAGTTCTAGGTCATCGATTTGAT 58.560 40.000 0.00 0.00 38.01 2.57
6059 11173 9.745880 AAAGTATATCACTAGATTTGTACACGG 57.254 33.333 0.00 0.00 36.04 4.94
6060 11174 8.687292 AGTATATCACTAGATTTGTACACGGA 57.313 34.615 0.00 0.00 34.98 4.69
6061 11175 9.298250 AGTATATCACTAGATTTGTACACGGAT 57.702 33.333 0.00 0.00 34.98 4.18
6062 11176 9.343103 GTATATCACTAGATTTGTACACGGATG 57.657 37.037 0.00 0.00 35.67 3.51
6063 11177 5.654603 TCACTAGATTTGTACACGGATGT 57.345 39.130 0.00 0.00 43.30 3.06
6064 11178 6.762702 TCACTAGATTTGTACACGGATGTA 57.237 37.500 0.00 0.00 40.48 2.29
6065 11179 6.792326 TCACTAGATTTGTACACGGATGTAG 58.208 40.000 0.00 5.51 42.06 2.74
6066 11180 6.376299 TCACTAGATTTGTACACGGATGTAGT 59.624 38.462 13.05 13.05 42.06 2.73
6067 11181 7.033791 CACTAGATTTGTACACGGATGTAGTT 58.966 38.462 14.90 4.66 42.06 2.24
6068 11182 7.544566 CACTAGATTTGTACACGGATGTAGTTT 59.455 37.037 14.90 0.60 42.06 2.66
6069 11183 8.092687 ACTAGATTTGTACACGGATGTAGTTTT 58.907 33.333 13.05 0.00 42.06 2.43
6070 11184 7.739498 AGATTTGTACACGGATGTAGTTTTT 57.261 32.000 0.00 0.00 42.06 1.94
6071 11185 8.836268 AGATTTGTACACGGATGTAGTTTTTA 57.164 30.769 0.00 0.00 42.06 1.52
6072 11186 9.275398 AGATTTGTACACGGATGTAGTTTTTAA 57.725 29.630 0.00 0.00 42.06 1.52
6073 11187 9.881529 GATTTGTACACGGATGTAGTTTTTAAA 57.118 29.630 0.00 0.00 42.06 1.52
6135 11249 8.928270 AGTTAAATCATCAACCTAGAACTACG 57.072 34.615 0.00 0.00 0.00 3.51
6136 11250 7.491696 AGTTAAATCATCAACCTAGAACTACGC 59.508 37.037 0.00 0.00 0.00 4.42
6137 11251 3.416119 TCATCAACCTAGAACTACGCG 57.584 47.619 3.53 3.53 0.00 6.01
6138 11252 3.011818 TCATCAACCTAGAACTACGCGA 58.988 45.455 15.93 0.00 0.00 5.87
6139 11253 3.441222 TCATCAACCTAGAACTACGCGAA 59.559 43.478 15.93 0.00 0.00 4.70
6140 11254 4.097437 TCATCAACCTAGAACTACGCGAAT 59.903 41.667 15.93 0.00 0.00 3.34
6141 11255 3.766151 TCAACCTAGAACTACGCGAATG 58.234 45.455 15.93 4.47 0.00 2.67
6142 11256 3.441222 TCAACCTAGAACTACGCGAATGA 59.559 43.478 15.93 0.00 0.00 2.57
6143 11257 3.417690 ACCTAGAACTACGCGAATGAC 57.582 47.619 15.93 0.66 0.00 3.06
6144 11258 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
6145 11259 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
6146 11260 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
6147 11261 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
6148 11262 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
6149 11263 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
6150 11264 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
6151 11265 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
6152 11266 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
6153 11267 1.924524 ACGCGAATGACTTATTCACCG 59.075 47.619 15.93 0.00 44.42 4.94
6154 11268 2.190161 CGCGAATGACTTATTCACCGA 58.810 47.619 0.00 0.00 44.42 4.69
6155 11269 2.216488 CGCGAATGACTTATTCACCGAG 59.784 50.000 0.00 0.00 44.42 4.63
6156 11270 3.444916 GCGAATGACTTATTCACCGAGA 58.555 45.455 0.00 0.00 44.42 4.04
6157 11271 3.243177 GCGAATGACTTATTCACCGAGAC 59.757 47.826 0.00 0.00 44.42 3.36
6158 11272 3.482472 CGAATGACTTATTCACCGAGACG 59.518 47.826 0.00 0.00 44.42 4.18
6159 11273 3.797256 GAATGACTTATTCACCGAGACGG 59.203 47.826 8.67 8.67 43.79 4.79
6160 11274 4.439700 GAATGACTTATTCACCGAGACGGA 60.440 45.833 16.99 0.00 45.73 4.69
6161 11275 6.238416 GAATGACTTATTCACCGAGACGGAG 61.238 48.000 16.99 9.14 45.73 4.63
6171 11285 1.730501 CGAGACGGAGGTAGTACACA 58.269 55.000 2.06 0.00 0.00 3.72
6172 11286 2.079158 CGAGACGGAGGTAGTACACAA 58.921 52.381 2.06 0.00 0.00 3.33
6173 11287 2.485426 CGAGACGGAGGTAGTACACAAA 59.515 50.000 2.06 0.00 0.00 2.83
6174 11288 3.425892 CGAGACGGAGGTAGTACACAAAG 60.426 52.174 2.06 0.00 0.00 2.77
6175 11289 3.494332 AGACGGAGGTAGTACACAAAGT 58.506 45.455 2.06 0.00 0.00 2.66
6176 11290 3.255149 AGACGGAGGTAGTACACAAAGTG 59.745 47.826 2.06 0.00 39.75 3.16
6177 11291 2.298163 ACGGAGGTAGTACACAAAGTGG 59.702 50.000 2.06 0.00 37.94 4.00
6178 11292 2.298163 CGGAGGTAGTACACAAAGTGGT 59.702 50.000 2.06 0.00 37.94 4.16
6179 11293 3.243975 CGGAGGTAGTACACAAAGTGGTT 60.244 47.826 2.06 0.00 37.94 3.67
6180 11294 4.313282 GGAGGTAGTACACAAAGTGGTTC 58.687 47.826 2.06 0.00 37.94 3.62
6181 11295 4.202284 GGAGGTAGTACACAAAGTGGTTCA 60.202 45.833 2.06 0.00 37.94 3.18
6182 11296 4.700700 AGGTAGTACACAAAGTGGTTCAC 58.299 43.478 2.06 0.00 37.94 3.18
6184 11298 4.748600 GGTAGTACACAAAGTGGTTCACTC 59.251 45.833 2.06 0.00 44.62 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.903682 CAAATCATCTATGTTCACTCAAAAGTT 57.096 29.630 0.00 0.00 31.71 2.66
7 8 8.025445 GCAAATCATCTATGTTCACTCAAAAGT 58.975 33.333 0.00 0.00 35.60 2.66
8 9 7.487189 GGCAAATCATCTATGTTCACTCAAAAG 59.513 37.037 0.00 0.00 0.00 2.27
9 10 7.039853 TGGCAAATCATCTATGTTCACTCAAAA 60.040 33.333 0.00 0.00 0.00 2.44
10 11 6.433716 TGGCAAATCATCTATGTTCACTCAAA 59.566 34.615 0.00 0.00 0.00 2.69
11 12 5.945191 TGGCAAATCATCTATGTTCACTCAA 59.055 36.000 0.00 0.00 0.00 3.02
12 13 5.355071 GTGGCAAATCATCTATGTTCACTCA 59.645 40.000 0.00 0.00 0.00 3.41
13 14 5.587844 AGTGGCAAATCATCTATGTTCACTC 59.412 40.000 0.00 0.00 30.74 3.51
14 15 5.503927 AGTGGCAAATCATCTATGTTCACT 58.496 37.500 0.00 0.00 0.00 3.41
15 16 5.824904 AGTGGCAAATCATCTATGTTCAC 57.175 39.130 0.00 0.00 0.00 3.18
16 17 7.112122 AGTAAGTGGCAAATCATCTATGTTCA 58.888 34.615 0.00 0.00 0.00 3.18
17 18 7.497249 AGAGTAAGTGGCAAATCATCTATGTTC 59.503 37.037 0.00 0.00 0.00 3.18
18 19 7.281774 CAGAGTAAGTGGCAAATCATCTATGTT 59.718 37.037 0.00 0.00 0.00 2.71
19 20 6.765036 CAGAGTAAGTGGCAAATCATCTATGT 59.235 38.462 0.00 0.00 0.00 2.29
20 21 6.988580 TCAGAGTAAGTGGCAAATCATCTATG 59.011 38.462 0.00 0.00 0.00 2.23
21 22 6.989169 GTCAGAGTAAGTGGCAAATCATCTAT 59.011 38.462 0.00 0.00 0.00 1.98
22 23 6.155221 AGTCAGAGTAAGTGGCAAATCATCTA 59.845 38.462 0.00 0.00 0.00 1.98
23 24 5.046014 AGTCAGAGTAAGTGGCAAATCATCT 60.046 40.000 0.00 0.00 0.00 2.90
24 25 5.181748 AGTCAGAGTAAGTGGCAAATCATC 58.818 41.667 0.00 0.00 0.00 2.92
25 26 5.046014 AGAGTCAGAGTAAGTGGCAAATCAT 60.046 40.000 0.00 0.00 0.00 2.45
26 27 4.284490 AGAGTCAGAGTAAGTGGCAAATCA 59.716 41.667 0.00 0.00 0.00 2.57
27 28 4.826556 AGAGTCAGAGTAAGTGGCAAATC 58.173 43.478 0.00 0.00 0.00 2.17
28 29 4.899352 AGAGTCAGAGTAAGTGGCAAAT 57.101 40.909 0.00 0.00 0.00 2.32
29 30 4.689612 AAGAGTCAGAGTAAGTGGCAAA 57.310 40.909 0.00 0.00 0.00 3.68
30 31 5.246203 ACATAAGAGTCAGAGTAAGTGGCAA 59.754 40.000 0.00 0.00 0.00 4.52
31 32 4.772624 ACATAAGAGTCAGAGTAAGTGGCA 59.227 41.667 0.00 0.00 0.00 4.92
32 33 5.331876 ACATAAGAGTCAGAGTAAGTGGC 57.668 43.478 0.00 0.00 0.00 5.01
33 34 7.329717 GTGAAACATAAGAGTCAGAGTAAGTGG 59.670 40.741 0.00 0.00 36.32 4.00
34 35 7.867909 TGTGAAACATAAGAGTCAGAGTAAGTG 59.132 37.037 0.00 0.00 45.67 3.16
35 36 7.952671 TGTGAAACATAAGAGTCAGAGTAAGT 58.047 34.615 0.00 0.00 45.67 2.24
53 54 6.079424 TGCTGTTAGGGTAATTTGTGAAAC 57.921 37.500 0.00 0.00 37.35 2.78
54 55 6.719370 AGATGCTGTTAGGGTAATTTGTGAAA 59.281 34.615 0.00 0.00 0.00 2.69
55 56 6.245408 AGATGCTGTTAGGGTAATTTGTGAA 58.755 36.000 0.00 0.00 0.00 3.18
56 57 5.815581 AGATGCTGTTAGGGTAATTTGTGA 58.184 37.500 0.00 0.00 0.00 3.58
57 58 5.066505 GGAGATGCTGTTAGGGTAATTTGTG 59.933 44.000 0.00 0.00 0.00 3.33
61 62 5.450818 TTGGAGATGCTGTTAGGGTAATT 57.549 39.130 0.00 0.00 0.00 1.40
66 67 3.181451 TGCTATTGGAGATGCTGTTAGGG 60.181 47.826 0.00 0.00 0.00 3.53
74 75 2.926778 AGGTCTGCTATTGGAGATGC 57.073 50.000 1.26 0.00 42.48 3.91
157 158 0.824759 CTCTCGTTGTAAGGAGGGGG 59.175 60.000 12.70 2.96 40.38 5.40
160 161 2.448453 AGGACTCTCGTTGTAAGGAGG 58.552 52.381 12.70 7.50 40.38 4.30
161 162 3.119424 GGAAGGACTCTCGTTGTAAGGAG 60.119 52.174 7.76 7.76 41.10 3.69
162 163 2.824341 GGAAGGACTCTCGTTGTAAGGA 59.176 50.000 0.00 0.00 0.00 3.36
163 164 2.561419 TGGAAGGACTCTCGTTGTAAGG 59.439 50.000 0.00 0.00 0.00 2.69
164 165 3.936372 TGGAAGGACTCTCGTTGTAAG 57.064 47.619 0.00 0.00 0.00 2.34
165 166 4.628074 CTTTGGAAGGACTCTCGTTGTAA 58.372 43.478 0.00 0.00 0.00 2.41
166 167 4.252971 CTTTGGAAGGACTCTCGTTGTA 57.747 45.455 0.00 0.00 0.00 2.41
167 168 3.113260 CTTTGGAAGGACTCTCGTTGT 57.887 47.619 0.00 0.00 0.00 3.32
179 180 4.527038 TGAGTGGAGTAGTACCTTTGGAAG 59.473 45.833 0.00 0.00 0.00 3.46
183 184 4.379603 CGTCTGAGTGGAGTAGTACCTTTG 60.380 50.000 0.00 0.00 0.00 2.77
190 191 2.563261 TCACGTCTGAGTGGAGTAGT 57.437 50.000 0.00 0.00 42.10 2.73
212 213 0.607620 ACTGAGTCAGCTGAGCCTTC 59.392 55.000 18.89 12.90 34.37 3.46
221 222 0.108898 AGCACGATGACTGAGTCAGC 60.109 55.000 20.04 20.04 46.04 4.26
228 229 3.305361 CACACTATTGAGCACGATGACTG 59.695 47.826 0.00 0.00 0.00 3.51
232 233 2.349580 CACCACACTATTGAGCACGATG 59.650 50.000 0.00 0.00 0.00 3.84
259 269 1.337703 GTTGCATTCCAGAACAGTGCA 59.662 47.619 3.62 3.62 43.33 4.57
279 289 2.887151 ACTCCCAAGGAAGTTCCATG 57.113 50.000 23.87 20.98 39.61 3.66
280 290 2.716424 TGAACTCCCAAGGAAGTTCCAT 59.284 45.455 23.87 9.49 39.61 3.41
281 291 2.106511 CTGAACTCCCAAGGAAGTTCCA 59.893 50.000 23.87 1.59 39.61 3.53
354 364 1.673168 CAATGCCAAGCCCTCTCTAC 58.327 55.000 0.00 0.00 0.00 2.59
372 382 1.908637 TAGCCCAAGATCCTCCCCCA 61.909 60.000 0.00 0.00 0.00 4.96
464 475 0.814457 ATCTCACTGACGACAGCTCC 59.186 55.000 14.85 0.00 46.95 4.70
470 481 3.902150 TCAGTTTGATCTCACTGACGAC 58.098 45.455 18.39 0.00 43.63 4.34
523 534 3.059120 CGATATTCGACGCTCTACCTTCA 60.059 47.826 0.00 0.00 43.74 3.02
590 601 6.323482 TCCAAGGAATGTGATTGTCTCAAAAA 59.677 34.615 0.00 0.00 35.07 1.94
593 604 4.761739 GTCCAAGGAATGTGATTGTCTCAA 59.238 41.667 0.00 0.00 35.07 3.02
594 605 4.202451 TGTCCAAGGAATGTGATTGTCTCA 60.202 41.667 0.00 0.00 0.00 3.27
595 606 4.326826 TGTCCAAGGAATGTGATTGTCTC 58.673 43.478 0.00 0.00 0.00 3.36
596 607 4.371624 TGTCCAAGGAATGTGATTGTCT 57.628 40.909 0.00 0.00 0.00 3.41
597 608 4.142315 CCATGTCCAAGGAATGTGATTGTC 60.142 45.833 0.00 0.00 0.00 3.18
599 610 3.131577 CCCATGTCCAAGGAATGTGATTG 59.868 47.826 0.00 0.00 0.00 2.67
600 611 3.368248 CCCATGTCCAAGGAATGTGATT 58.632 45.455 0.00 0.00 0.00 2.57
601 612 2.358510 CCCCATGTCCAAGGAATGTGAT 60.359 50.000 0.00 0.00 0.00 3.06
611 1464 1.307309 CATGCCTCCCCATGTCCAA 59.693 57.895 0.00 0.00 38.19 3.53
643 1496 4.536765 GGATACAAAACAGATCATGGGGT 58.463 43.478 0.00 0.00 0.00 4.95
671 1524 6.534634 AGCTTTAGTACTCAAATTCCACAGT 58.465 36.000 0.00 0.00 0.00 3.55
688 1541 4.403734 TGAGGGGTTTAACCAAGCTTTAG 58.596 43.478 16.58 0.00 41.02 1.85
814 1667 4.179579 GCCATGTTCTTCGCCGCC 62.180 66.667 0.00 0.00 0.00 6.13
815 1668 2.200170 AAAGCCATGTTCTTCGCCGC 62.200 55.000 0.00 0.00 0.00 6.53
816 1669 0.454957 CAAAGCCATGTTCTTCGCCG 60.455 55.000 0.00 0.00 0.00 6.46
854 1707 0.616371 CTGGTGGGTGGACCGAATTA 59.384 55.000 0.00 0.00 44.64 1.40
870 1723 0.323178 AGAGTGCAAGGCCAATCTGG 60.323 55.000 5.01 0.00 38.57 3.86
871 1724 1.471684 GAAGAGTGCAAGGCCAATCTG 59.528 52.381 5.01 0.00 39.02 2.90
873 1726 0.449388 CGAAGAGTGCAAGGCCAATC 59.551 55.000 5.01 0.00 0.00 2.67
874 1727 0.962356 CCGAAGAGTGCAAGGCCAAT 60.962 55.000 5.01 0.00 0.00 3.16
875 1728 1.600636 CCGAAGAGTGCAAGGCCAA 60.601 57.895 5.01 0.00 0.00 4.52
876 1729 2.032528 CCGAAGAGTGCAAGGCCA 59.967 61.111 5.01 0.00 0.00 5.36
877 1730 3.435186 GCCGAAGAGTGCAAGGCC 61.435 66.667 0.00 0.00 41.81 5.19
879 1732 4.063529 TTGCCGAAGAGTGCAAGG 57.936 55.556 0.00 0.00 42.19 3.61
882 1735 1.741401 CCGATTGCCGAAGAGTGCA 60.741 57.895 0.00 0.00 41.76 4.57
883 1736 3.093278 CCGATTGCCGAAGAGTGC 58.907 61.111 0.00 0.00 41.76 4.40
1206 2063 2.777832 ATCCAGGACACAGAAGAAGC 57.222 50.000 0.00 0.00 0.00 3.86
1211 2068 1.550524 CCTCGAATCCAGGACACAGAA 59.449 52.381 0.00 0.00 31.91 3.02
1287 2144 2.039216 TGACAATCGGCTCTTAACCCAA 59.961 45.455 0.00 0.00 0.00 4.12
1324 2181 1.295423 GGTACATCCACACGGCACT 59.705 57.895 0.00 0.00 35.97 4.40
1325 2182 1.743995 GGGTACATCCACACGGCAC 60.744 63.158 0.00 0.00 38.11 5.01
1326 2183 2.217745 TGGGTACATCCACACGGCA 61.218 57.895 0.00 0.00 38.11 5.69
1327 2184 2.666207 TGGGTACATCCACACGGC 59.334 61.111 0.00 0.00 38.11 5.68
1334 2191 2.041216 AGGGAAAGTTGTGGGTACATCC 59.959 50.000 0.00 0.00 36.53 3.51
1341 2198 1.762370 AGCAAAAGGGAAAGTTGTGGG 59.238 47.619 0.00 0.00 0.00 4.61
1448 2394 6.203530 ACGCTGATGTTTCCATACATGATAAG 59.796 38.462 0.00 0.00 38.80 1.73
1449 2395 6.054941 ACGCTGATGTTTCCATACATGATAA 58.945 36.000 0.00 0.00 38.80 1.75
1450 2396 5.610398 ACGCTGATGTTTCCATACATGATA 58.390 37.500 0.00 0.00 38.80 2.15
1451 2397 4.454678 ACGCTGATGTTTCCATACATGAT 58.545 39.130 0.00 0.00 38.80 2.45
1492 2438 8.577296 GTGTGTTATCTGTCTGCTATATCCTTA 58.423 37.037 0.00 0.00 0.00 2.69
1551 2497 2.743928 GGAGTGCTTCGTGCCAGG 60.744 66.667 1.30 0.00 42.00 4.45
1676 2622 1.810151 GACGCAAGGATGGCAACTTTA 59.190 47.619 5.22 0.00 46.39 1.85
1691 2637 5.378292 TTTTATGGCAAGTTAATGACGCA 57.622 34.783 0.00 0.00 0.00 5.24
1716 2663 0.179032 ACACATGGCAAGACCGAACA 60.179 50.000 0.00 0.00 43.94 3.18
1724 2671 1.081242 GGCACGAACACATGGCAAG 60.081 57.895 0.00 0.00 40.91 4.01
1762 2709 1.463214 TCCTTCAGGCTTGGGACCA 60.463 57.895 0.00 0.00 34.44 4.02
1808 3121 0.254178 ACCCAGCCAATCTGCTACAG 59.746 55.000 0.00 0.00 40.32 2.74
1826 3139 6.043411 AGACTCGGCAAATCTGATACTTAAC 58.957 40.000 0.00 0.00 0.00 2.01
1828 3141 5.854010 AGACTCGGCAAATCTGATACTTA 57.146 39.130 0.00 0.00 0.00 2.24
1830 3143 4.890581 ACTAGACTCGGCAAATCTGATACT 59.109 41.667 0.00 0.00 0.00 2.12
1891 3213 2.862536 CAGAAGAACATGCGACGATGAT 59.137 45.455 0.00 0.00 0.00 2.45
1952 3989 7.865385 GCACATTACATTAACAGGAACTCAAAA 59.135 33.333 0.00 0.00 34.60 2.44
1957 3994 6.003950 ACAGCACATTACATTAACAGGAACT 58.996 36.000 0.00 0.00 43.88 3.01
1967 4004 7.701539 TTTATTCCAGACAGCACATTACATT 57.298 32.000 0.00 0.00 0.00 2.71
2016 4053 7.171678 GCTAACTGTCTGTTTTGACTTGTAGAT 59.828 37.037 0.00 0.00 39.89 1.98
2098 4143 9.845740 TGCCTATCATGCTTTACTTCTTAATAA 57.154 29.630 0.00 0.00 0.00 1.40
2099 4144 9.273016 GTGCCTATCATGCTTTACTTCTTAATA 57.727 33.333 0.00 0.00 0.00 0.98
2100 4145 7.775093 TGTGCCTATCATGCTTTACTTCTTAAT 59.225 33.333 0.00 0.00 0.00 1.40
2220 4265 5.730550 TGTGTAAACCATCATGAGGAGTAC 58.269 41.667 9.37 12.98 0.00 2.73
2403 4487 0.036732 TCTTTTCATCTGCTGCCCGT 59.963 50.000 0.00 0.00 0.00 5.28
2446 4530 1.180456 TGAAACTGCCCCATGTGCTG 61.180 55.000 9.01 9.01 0.00 4.41
2552 4636 4.105553 GGCCGTACCACCTTCCCC 62.106 72.222 0.00 0.00 38.86 4.81
2568 4652 1.228429 TTCTTCCTTGGCCGGTTGG 60.228 57.895 1.90 0.11 38.77 3.77
2569 4653 0.821711 TGTTCTTCCTTGGCCGGTTG 60.822 55.000 1.90 0.00 0.00 3.77
2570 4654 0.822121 GTGTTCTTCCTTGGCCGGTT 60.822 55.000 1.90 0.00 0.00 4.44
2571 4655 1.228154 GTGTTCTTCCTTGGCCGGT 60.228 57.895 1.90 0.00 0.00 5.28
2572 4656 0.537371 AAGTGTTCTTCCTTGGCCGG 60.537 55.000 0.00 0.00 0.00 6.13
2573 4657 1.318576 AAAGTGTTCTTCCTTGGCCG 58.681 50.000 0.00 0.00 32.90 6.13
2574 4658 4.079253 TCATAAAGTGTTCTTCCTTGGCC 58.921 43.478 0.00 0.00 32.90 5.36
2575 4659 4.379918 GCTCATAAAGTGTTCTTCCTTGGC 60.380 45.833 0.00 0.00 32.90 4.52
2716 4800 4.996976 GTGCTCACGGTCACTGAT 57.003 55.556 0.00 0.00 0.00 2.90
2752 4836 3.205056 AGGCAATGGATGGATTAGACCAA 59.795 43.478 0.00 0.00 43.47 3.67
2753 4837 2.785269 AGGCAATGGATGGATTAGACCA 59.215 45.455 0.00 0.00 44.41 4.02
2754 4838 3.152341 CAGGCAATGGATGGATTAGACC 58.848 50.000 0.00 0.00 0.00 3.85
2761 4845 1.224315 CGGTCAGGCAATGGATGGA 59.776 57.895 0.00 0.00 0.00 3.41
2788 4872 5.029014 ACGACTGTCGAGATTTAAGAATCG 58.971 41.667 33.99 5.09 43.74 3.34
2796 4880 2.492088 TGATCCACGACTGTCGAGATTT 59.508 45.455 33.99 16.46 43.74 2.17
2905 4989 2.158900 ACAAGGTCCAGCAGATATTCCG 60.159 50.000 0.00 0.00 0.00 4.30
2968 5052 3.434319 GTGGATGTGCCTGCACCG 61.434 66.667 18.80 0.00 45.63 4.94
2976 5060 2.292267 CTCCATGTTAGGTGGATGTGC 58.708 52.381 0.00 0.00 44.34 4.57
3050 5167 1.980772 AAAGATGTGGCAGGCAGGC 60.981 57.895 0.00 0.00 44.50 4.85
3051 5168 1.601419 CCAAAGATGTGGCAGGCAGG 61.601 60.000 0.00 0.00 0.00 4.85
3164 5281 1.091771 ATCACGGCAATGCTTCTCCG 61.092 55.000 4.82 1.88 46.61 4.63
3177 5294 1.300971 CCAGTTGGTGCTCATCACGG 61.301 60.000 0.00 0.00 46.56 4.94
3197 5314 2.440147 CATGGTGACCAGGGGCAA 59.560 61.111 11.23 0.00 36.75 4.52
3223 5341 2.907042 ACTAGCTAAGCTCCAAACCTGT 59.093 45.455 0.00 0.00 40.44 4.00
3230 5348 3.955524 AGGAGTACTAGCTAAGCTCCA 57.044 47.619 26.39 0.00 45.92 3.86
3279 5397 9.464714 GAAATATAAGAGCGTTTAGATCAGTGA 57.535 33.333 0.00 0.00 37.82 3.41
3280 5398 9.469807 AGAAATATAAGAGCGTTTAGATCAGTG 57.530 33.333 0.00 0.00 37.82 3.66
3289 5407 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
3290 5408 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
3291 5409 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
3292 5410 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
3293 5411 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3333 5451 2.294078 CCTCCCGGCTCCAGAAACT 61.294 63.158 0.00 0.00 0.00 2.66
3337 5455 4.779733 GGACCTCCCGGCTCCAGA 62.780 72.222 0.00 0.00 33.36 3.86
3400 5565 5.835819 CCATAGAGTGGTCTGAGGAGAATAA 59.164 44.000 0.00 0.00 43.44 1.40
3434 5599 2.573462 AGAACTAATCTGAGCAAGGGCA 59.427 45.455 0.00 0.00 38.86 5.36
3534 5699 0.608130 TTCACACCCATCGAGTCAGG 59.392 55.000 0.00 0.00 0.00 3.86
3649 5822 1.611936 GGAAGTCCCAAGTGCCTTCTC 60.612 57.143 0.00 0.00 34.96 2.87
3661 5834 1.802553 TACCTGGCTATGGAAGTCCC 58.197 55.000 0.00 0.00 34.29 4.46
3719 5900 3.199442 TGGATTCCTGGGAGTAAGACA 57.801 47.619 3.95 0.00 0.00 3.41
3722 5903 4.445448 CCTCAATGGATTCCTGGGAGTAAG 60.445 50.000 3.95 0.00 38.35 2.34
3749 5935 0.106268 TTGCCAGTTCAAAGCTCCCA 60.106 50.000 0.00 0.00 0.00 4.37
3823 6009 3.125316 GCCTCCTATCTTTGTGTTCAACG 59.875 47.826 0.00 0.00 32.93 4.10
3838 6072 2.093658 CCTGCTAAAAACTCGCCTCCTA 60.094 50.000 0.00 0.00 0.00 2.94
3922 6156 1.962100 TCTCATGTGGCAATGCAACAA 59.038 42.857 20.25 3.07 46.12 2.83
3927 6165 3.241067 ACATTTCTCATGTGGCAATGC 57.759 42.857 15.10 0.00 0.00 3.56
3942 6180 2.608623 CCCCTGTTCTCCCAAACATTT 58.391 47.619 0.00 0.00 38.41 2.32
3944 6182 0.409484 CCCCCTGTTCTCCCAAACAT 59.591 55.000 0.00 0.00 38.41 2.71
3945 6183 0.699577 TCCCCCTGTTCTCCCAAACA 60.700 55.000 0.00 0.00 37.56 2.83
3947 6185 1.077005 CATTCCCCCTGTTCTCCCAAA 59.923 52.381 0.00 0.00 0.00 3.28
3948 6186 0.704076 CATTCCCCCTGTTCTCCCAA 59.296 55.000 0.00 0.00 0.00 4.12
3950 6188 1.615262 CCATTCCCCCTGTTCTCCC 59.385 63.158 0.00 0.00 0.00 4.30
3951 6189 1.615262 CCCATTCCCCCTGTTCTCC 59.385 63.158 0.00 0.00 0.00 3.71
3995 6233 3.763897 AGTTTGGCAACTGAAGTTTGAGT 59.236 39.130 0.00 0.00 42.05 3.41
4136 9044 7.394816 AGTATATGCCTGGACCAAATACATAC 58.605 38.462 0.00 1.84 0.00 2.39
4303 9218 1.630369 ACCTGGCAGCTCATCAGTTAA 59.370 47.619 9.56 0.00 0.00 2.01
4509 9424 7.437267 GCAAAAGTTCAGTAGTTACTCTGTACA 59.563 37.037 16.66 0.00 35.48 2.90
4593 9509 3.157087 ACTACTGGCATCCCAAAAGTTG 58.843 45.455 0.00 0.00 41.58 3.16
4949 9868 1.377856 GCCCTCACCAGCTTCTTCC 60.378 63.158 0.00 0.00 0.00 3.46
5037 9956 6.949463 GGGGCTAGTATCAGAGTAGATTAAGT 59.051 42.308 0.00 0.00 33.38 2.24
5038 9957 7.179269 AGGGGCTAGTATCAGAGTAGATTAAG 58.821 42.308 0.00 0.00 33.38 1.85
5082 10173 1.880027 GCGAATATCACCCAACCATCC 59.120 52.381 0.00 0.00 0.00 3.51
5148 10239 1.448540 GCCAGATGACTGTGTCCCG 60.449 63.158 0.00 0.00 42.05 5.14
5216 10307 9.683069 GACTTCCAATTGGTAGCATATAAATTG 57.317 33.333 26.12 8.61 36.21 2.32
5225 10316 3.627395 ATCGACTTCCAATTGGTAGCA 57.373 42.857 26.12 13.76 36.21 3.49
5303 10396 8.358148 ACTATAATCAAGTCCATAACCGTACTG 58.642 37.037 0.00 0.00 0.00 2.74
5381 10474 5.459434 CGTATGTTACAGTTACACACACACA 59.541 40.000 2.29 0.00 0.00 3.72
5382 10475 5.610982 GCGTATGTTACAGTTACACACACAC 60.611 44.000 2.29 0.00 0.00 3.82
5383 10476 4.445052 GCGTATGTTACAGTTACACACACA 59.555 41.667 2.29 0.00 0.00 3.72
5384 10477 4.143263 GGCGTATGTTACAGTTACACACAC 60.143 45.833 2.29 0.00 0.00 3.82
5423 10516 9.084164 ACACTGATTGTATATGTAACGAAGTTC 57.916 33.333 0.00 0.00 42.35 3.01
5436 10529 7.338449 TGACTGCTAGTACACACTGATTGTATA 59.662 37.037 0.00 0.00 35.67 1.47
5455 10548 0.894141 CTGTACAGAGCCTGACTGCT 59.106 55.000 18.45 0.00 46.37 4.24
5475 10568 0.530288 ACAAACACACGCAAGGCTTT 59.470 45.000 0.00 0.00 46.39 3.51
5476 10569 0.179140 CACAAACACACGCAAGGCTT 60.179 50.000 0.00 0.00 46.39 4.35
5477 10570 1.312371 ACACAAACACACGCAAGGCT 61.312 50.000 0.00 0.00 46.39 4.58
5478 10571 0.865639 GACACAAACACACGCAAGGC 60.866 55.000 0.00 0.00 46.39 4.35
5479 10572 0.732571 AGACACAAACACACGCAAGG 59.267 50.000 0.00 0.00 46.39 3.61
5481 10574 2.286713 GCATAGACACAAACACACGCAA 60.287 45.455 0.00 0.00 0.00 4.85
5539 10641 0.029035 GCAATGCAGCTGATCTTCCG 59.971 55.000 20.43 0.00 0.00 4.30
5564 10666 3.112580 CAGTTTTACCGTTGGCAGTTTG 58.887 45.455 0.00 0.00 0.00 2.93
5657 10771 9.258826 GATGTATATCATCTACATTCTGGATGC 57.741 37.037 0.00 0.00 46.64 3.91
5726 10840 0.251742 TTTTCGGACGGAGGGGAGTA 60.252 55.000 0.00 0.00 0.00 2.59
5727 10841 1.123246 TTTTTCGGACGGAGGGGAGT 61.123 55.000 0.00 0.00 0.00 3.85
5728 10842 0.391263 CTTTTTCGGACGGAGGGGAG 60.391 60.000 0.00 0.00 0.00 4.30
5729 10843 1.675219 CTTTTTCGGACGGAGGGGA 59.325 57.895 0.00 0.00 0.00 4.81
5730 10844 2.038837 GCTTTTTCGGACGGAGGGG 61.039 63.158 0.00 0.00 0.00 4.79
5731 10845 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
5732 10846 0.796927 GAAGCTTTTTCGGACGGAGG 59.203 55.000 0.00 0.00 0.00 4.30
5733 10847 0.796927 GGAAGCTTTTTCGGACGGAG 59.203 55.000 0.00 0.00 0.00 4.63
5734 10848 0.395312 AGGAAGCTTTTTCGGACGGA 59.605 50.000 0.00 0.00 0.00 4.69
5735 10849 0.796927 GAGGAAGCTTTTTCGGACGG 59.203 55.000 0.00 0.00 0.00 4.79
5736 10850 1.508632 TGAGGAAGCTTTTTCGGACG 58.491 50.000 0.00 0.00 0.00 4.79
5737 10851 3.982576 TTTGAGGAAGCTTTTTCGGAC 57.017 42.857 0.00 0.00 0.00 4.79
5738 10852 3.255642 CCATTTGAGGAAGCTTTTTCGGA 59.744 43.478 0.00 0.00 0.00 4.55
5739 10853 3.255642 TCCATTTGAGGAAGCTTTTTCGG 59.744 43.478 0.00 0.00 33.93 4.30
5740 10854 4.503741 TCCATTTGAGGAAGCTTTTTCG 57.496 40.909 0.00 0.00 33.93 3.46
5741 10855 5.787380 ACATCCATTTGAGGAAGCTTTTTC 58.213 37.500 0.00 2.12 41.92 2.29
5742 10856 5.813513 ACATCCATTTGAGGAAGCTTTTT 57.186 34.783 0.00 0.00 41.92 1.94
5743 10857 6.894103 AGATACATCCATTTGAGGAAGCTTTT 59.106 34.615 0.00 0.00 41.92 2.27
5744 10858 6.430007 AGATACATCCATTTGAGGAAGCTTT 58.570 36.000 0.00 0.00 41.92 3.51
5745 10859 6.011122 AGATACATCCATTTGAGGAAGCTT 57.989 37.500 0.00 0.00 41.92 3.74
5746 10860 5.643421 AGATACATCCATTTGAGGAAGCT 57.357 39.130 0.00 0.00 41.92 3.74
5747 10861 5.411053 GCTAGATACATCCATTTGAGGAAGC 59.589 44.000 0.00 0.00 41.92 3.86
5748 10862 6.426328 GTGCTAGATACATCCATTTGAGGAAG 59.574 42.308 0.00 0.00 41.92 3.46
5749 10863 6.100279 AGTGCTAGATACATCCATTTGAGGAA 59.900 38.462 0.00 0.00 41.92 3.36
5750 10864 5.604231 AGTGCTAGATACATCCATTTGAGGA 59.396 40.000 0.00 0.00 43.01 3.71
5751 10865 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
5752 10866 7.601886 CCTAAGTGCTAGATACATCCATTTGAG 59.398 40.741 0.00 0.00 0.00 3.02
5753 10867 7.290014 TCCTAAGTGCTAGATACATCCATTTGA 59.710 37.037 0.00 0.00 0.00 2.69
5754 10868 7.445121 TCCTAAGTGCTAGATACATCCATTTG 58.555 38.462 0.00 0.00 0.00 2.32
5755 10869 7.618019 TCCTAAGTGCTAGATACATCCATTT 57.382 36.000 0.00 0.00 0.00 2.32
5756 10870 7.071196 TGTTCCTAAGTGCTAGATACATCCATT 59.929 37.037 0.00 0.00 0.00 3.16
5757 10871 6.554982 TGTTCCTAAGTGCTAGATACATCCAT 59.445 38.462 0.00 0.00 0.00 3.41
5758 10872 5.897250 TGTTCCTAAGTGCTAGATACATCCA 59.103 40.000 0.00 0.00 0.00 3.41
5759 10873 6.406692 TGTTCCTAAGTGCTAGATACATCC 57.593 41.667 0.00 0.00 0.00 3.51
5760 10874 7.982354 AGTTTGTTCCTAAGTGCTAGATACATC 59.018 37.037 0.00 0.00 0.00 3.06
5761 10875 7.852263 AGTTTGTTCCTAAGTGCTAGATACAT 58.148 34.615 0.00 0.00 0.00 2.29
5762 10876 7.241042 AGTTTGTTCCTAAGTGCTAGATACA 57.759 36.000 0.00 0.00 0.00 2.29
5763 10877 7.064728 CCAAGTTTGTTCCTAAGTGCTAGATAC 59.935 40.741 0.00 0.00 0.00 2.24
5764 10878 7.103641 CCAAGTTTGTTCCTAAGTGCTAGATA 58.896 38.462 0.00 0.00 0.00 1.98
5765 10879 5.940470 CCAAGTTTGTTCCTAAGTGCTAGAT 59.060 40.000 0.00 0.00 0.00 1.98
5766 10880 5.305585 CCAAGTTTGTTCCTAAGTGCTAGA 58.694 41.667 0.00 0.00 0.00 2.43
5767 10881 4.455877 CCCAAGTTTGTTCCTAAGTGCTAG 59.544 45.833 0.00 0.00 0.00 3.42
5768 10882 4.103469 TCCCAAGTTTGTTCCTAAGTGCTA 59.897 41.667 0.00 0.00 0.00 3.49
5769 10883 3.117663 TCCCAAGTTTGTTCCTAAGTGCT 60.118 43.478 0.00 0.00 0.00 4.40
5770 10884 3.004419 GTCCCAAGTTTGTTCCTAAGTGC 59.996 47.826 0.00 0.00 0.00 4.40
5771 10885 4.204012 TGTCCCAAGTTTGTTCCTAAGTG 58.796 43.478 0.00 0.00 0.00 3.16
5772 10886 4.513406 TGTCCCAAGTTTGTTCCTAAGT 57.487 40.909 0.00 0.00 0.00 2.24
5773 10887 5.845391 TTTGTCCCAAGTTTGTTCCTAAG 57.155 39.130 0.00 0.00 0.00 2.18
5774 10888 6.800072 AATTTGTCCCAAGTTTGTTCCTAA 57.200 33.333 0.00 0.00 0.00 2.69
5775 10889 6.800072 AAATTTGTCCCAAGTTTGTTCCTA 57.200 33.333 0.00 0.00 0.00 2.94
5776 10890 5.692115 AAATTTGTCCCAAGTTTGTTCCT 57.308 34.783 0.00 0.00 0.00 3.36
5777 10891 6.751514 AAAAATTTGTCCCAAGTTTGTTCC 57.248 33.333 0.00 0.00 0.00 3.62
5797 10911 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
5798 10912 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
5799 10913 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
5800 10914 2.965671 ATATACTCCCTCCGTCCGAA 57.034 50.000 0.00 0.00 0.00 4.30
5801 10915 5.901413 ATATATATACTCCCTCCGTCCGA 57.099 43.478 0.00 0.00 0.00 4.55
5802 10916 8.632906 ATTTATATATATACTCCCTCCGTCCG 57.367 38.462 1.73 0.00 0.00 4.79
5845 10959 7.229707 GGATACTCATTCTCTACTGCTGACTTA 59.770 40.741 0.00 0.00 0.00 2.24
5867 10981 6.045955 GGTTTTCAAGCTTTTGTGTTGGATA 58.954 36.000 0.00 0.00 0.00 2.59
5930 11044 7.288158 AGGTAGTACTATTTCTCCCATCTTGAC 59.712 40.741 5.75 0.00 0.00 3.18
5954 11068 3.952323 TGACTTATTCACCTAGACGGAGG 59.048 47.826 0.00 0.00 42.89 4.30
5955 11069 5.776173 ATGACTTATTCACCTAGACGGAG 57.224 43.478 0.00 0.00 36.92 4.63
5956 11070 5.220989 CGAATGACTTATTCACCTAGACGGA 60.221 44.000 0.00 0.00 44.42 4.69
5957 11071 4.976731 CGAATGACTTATTCACCTAGACGG 59.023 45.833 0.00 0.00 44.42 4.79
5958 11072 4.441415 GCGAATGACTTATTCACCTAGACG 59.559 45.833 0.00 0.00 44.42 4.18
5959 11073 4.441415 CGCGAATGACTTATTCACCTAGAC 59.559 45.833 0.00 0.00 44.42 2.59
5960 11074 4.097437 ACGCGAATGACTTATTCACCTAGA 59.903 41.667 15.93 0.00 44.42 2.43
5961 11075 4.360563 ACGCGAATGACTTATTCACCTAG 58.639 43.478 15.93 0.00 44.42 3.02
5962 11076 4.380841 ACGCGAATGACTTATTCACCTA 57.619 40.909 15.93 0.00 44.42 3.08
5963 11077 3.247006 ACGCGAATGACTTATTCACCT 57.753 42.857 15.93 0.00 44.42 4.00
5964 11078 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
5965 11079 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
5966 11080 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
5967 11081 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
5968 11082 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
5969 11083 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
5970 11084 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
5971 11085 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
5972 11086 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
5973 11087 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
5974 11088 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
5975 11089 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
5976 11090 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
5977 11091 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
5978 11092 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
5979 11093 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
5980 11094 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
5981 11095 5.817988 TCAAATCGATGACCTAGAACTACG 58.182 41.667 0.00 0.00 0.00 3.51
6033 11147 9.745880 CCGTGTACAAATCTAGTGATATACTTT 57.254 33.333 0.00 0.00 40.89 2.66
6034 11148 9.128404 TCCGTGTACAAATCTAGTGATATACTT 57.872 33.333 0.00 0.00 40.89 2.24
6035 11149 8.687292 TCCGTGTACAAATCTAGTGATATACT 57.313 34.615 0.00 0.00 43.56 2.12
6036 11150 9.343103 CATCCGTGTACAAATCTAGTGATATAC 57.657 37.037 0.00 0.00 31.70 1.47
6037 11151 9.074576 ACATCCGTGTACAAATCTAGTGATATA 57.925 33.333 0.00 0.00 36.63 0.86
6038 11152 7.952671 ACATCCGTGTACAAATCTAGTGATAT 58.047 34.615 0.00 0.00 36.63 1.63
6039 11153 7.342769 ACATCCGTGTACAAATCTAGTGATA 57.657 36.000 0.00 0.00 36.63 2.15
6040 11154 6.222038 ACATCCGTGTACAAATCTAGTGAT 57.778 37.500 0.00 0.00 36.63 3.06
6041 11155 5.654603 ACATCCGTGTACAAATCTAGTGA 57.345 39.130 0.00 0.00 36.63 3.41
6042 11156 6.561614 ACTACATCCGTGTACAAATCTAGTG 58.438 40.000 0.00 0.00 39.77 2.74
6043 11157 6.770746 ACTACATCCGTGTACAAATCTAGT 57.229 37.500 0.00 0.00 39.77 2.57
6044 11158 8.475331 AAAACTACATCCGTGTACAAATCTAG 57.525 34.615 0.00 0.00 39.77 2.43
6045 11159 8.836268 AAAAACTACATCCGTGTACAAATCTA 57.164 30.769 0.00 0.00 39.77 1.98
6046 11160 7.739498 AAAAACTACATCCGTGTACAAATCT 57.261 32.000 0.00 0.00 39.77 2.40
6047 11161 9.881529 TTTAAAAACTACATCCGTGTACAAATC 57.118 29.630 0.00 0.00 39.77 2.17
6110 11224 7.491696 GCGTAGTTCTAGGTTGATGATTTAACT 59.508 37.037 0.00 0.00 0.00 2.24
6111 11225 7.514747 CGCGTAGTTCTAGGTTGATGATTTAAC 60.515 40.741 0.00 0.00 0.00 2.01
6112 11226 6.474427 CGCGTAGTTCTAGGTTGATGATTTAA 59.526 38.462 0.00 0.00 0.00 1.52
6113 11227 5.975344 CGCGTAGTTCTAGGTTGATGATTTA 59.025 40.000 0.00 0.00 0.00 1.40
6114 11228 4.804139 CGCGTAGTTCTAGGTTGATGATTT 59.196 41.667 0.00 0.00 0.00 2.17
6115 11229 4.097437 TCGCGTAGTTCTAGGTTGATGATT 59.903 41.667 5.77 0.00 0.00 2.57
6116 11230 3.630769 TCGCGTAGTTCTAGGTTGATGAT 59.369 43.478 5.77 0.00 0.00 2.45
6117 11231 3.011818 TCGCGTAGTTCTAGGTTGATGA 58.988 45.455 5.77 0.00 0.00 2.92
6118 11232 3.416119 TCGCGTAGTTCTAGGTTGATG 57.584 47.619 5.77 0.00 0.00 3.07
6119 11233 4.097437 TCATTCGCGTAGTTCTAGGTTGAT 59.903 41.667 5.77 0.00 0.00 2.57
6120 11234 3.441222 TCATTCGCGTAGTTCTAGGTTGA 59.559 43.478 5.77 0.00 0.00 3.18
6121 11235 3.546670 GTCATTCGCGTAGTTCTAGGTTG 59.453 47.826 5.77 0.00 0.00 3.77
6122 11236 3.442977 AGTCATTCGCGTAGTTCTAGGTT 59.557 43.478 5.77 0.00 0.00 3.50
6123 11237 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
6124 11238 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
6125 11239 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
6126 11240 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
6127 11241 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
6128 11242 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
6129 11243 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
6136 11250 3.482472 CGTCTCGGTGAATAAGTCATTCG 59.518 47.826 0.00 0.00 45.25 3.34
6137 11251 3.797256 CCGTCTCGGTGAATAAGTCATTC 59.203 47.826 0.00 0.00 42.73 2.67
6138 11252 3.782046 CCGTCTCGGTGAATAAGTCATT 58.218 45.455 0.00 0.00 42.73 2.57
6139 11253 3.438297 CCGTCTCGGTGAATAAGTCAT 57.562 47.619 0.00 0.00 42.73 3.06
6140 11254 2.933495 CCGTCTCGGTGAATAAGTCA 57.067 50.000 0.00 0.00 42.73 3.41
6152 11266 1.730501 TGTGTACTACCTCCGTCTCG 58.269 55.000 0.00 0.00 0.00 4.04
6153 11267 3.505293 ACTTTGTGTACTACCTCCGTCTC 59.495 47.826 0.00 0.00 0.00 3.36
6154 11268 3.255149 CACTTTGTGTACTACCTCCGTCT 59.745 47.826 0.00 0.00 0.00 4.18
6155 11269 3.572584 CACTTTGTGTACTACCTCCGTC 58.427 50.000 0.00 0.00 0.00 4.79
6156 11270 2.298163 CCACTTTGTGTACTACCTCCGT 59.702 50.000 0.00 0.00 0.00 4.69
6157 11271 2.298163 ACCACTTTGTGTACTACCTCCG 59.702 50.000 0.00 0.00 0.00 4.63
6158 11272 4.202284 TGAACCACTTTGTGTACTACCTCC 60.202 45.833 0.00 0.00 0.00 4.30
6159 11273 4.748600 GTGAACCACTTTGTGTACTACCTC 59.251 45.833 0.00 0.00 0.00 3.85
6160 11274 4.407945 AGTGAACCACTTTGTGTACTACCT 59.592 41.667 0.00 0.00 42.59 3.08
6161 11275 4.700700 AGTGAACCACTTTGTGTACTACC 58.299 43.478 0.00 0.00 42.59 3.18
6162 11276 5.902051 GAGTGAACCACTTTGTGTACTAC 57.098 43.478 0.82 0.00 45.44 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.