Multiple sequence alignment - TraesCS2D01G213000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G213000 chr2D 100.000 6080 0 0 1 6080 172827379 172821300 0.000000e+00 11228.0
1 TraesCS2D01G213000 chr2D 92.405 79 6 0 1500 1578 172825828 172825750 4.980000e-21 113.0
2 TraesCS2D01G213000 chr2D 92.405 79 6 0 1552 1630 172825880 172825802 4.980000e-21 113.0
3 TraesCS2D01G213000 chr2A 93.395 4966 173 43 581 5512 177004444 177009288 0.000000e+00 7210.0
4 TraesCS2D01G213000 chr2A 96.435 533 15 2 5547 6078 177009362 177009891 0.000000e+00 876.0
5 TraesCS2D01G213000 chr2A 93.506 77 5 0 1501 1577 177005387 177005463 1.380000e-21 115.0
6 TraesCS2D01G213000 chr2A 88.136 59 5 2 528 584 650492430 650492488 1.090000e-07 69.4
7 TraesCS2D01G213000 chr2B 96.067 2466 77 7 2957 5407 225360324 225362784 0.000000e+00 3999.0
8 TraesCS2D01G213000 chr2B 92.881 2416 102 41 581 2963 225357787 225360165 0.000000e+00 3445.0
9 TraesCS2D01G213000 chr2B 91.267 584 19 10 5508 6080 225432508 225433070 0.000000e+00 767.0
10 TraesCS2D01G213000 chr2B 92.308 78 6 0 1501 1578 225358774 225358851 1.790000e-20 111.0
11 TraesCS2D01G213000 chr2B 91.525 59 3 1 5467 5525 225432406 225432462 5.050000e-11 80.5
12 TraesCS2D01G213000 chr6A 84.651 860 90 21 1715 2555 535383318 535384154 0.000000e+00 819.0
13 TraesCS2D01G213000 chr5A 83.372 854 90 33 1715 2558 472477883 472478694 0.000000e+00 743.0
14 TraesCS2D01G213000 chr5A 88.235 170 20 0 1 170 528975483 528975652 2.870000e-48 204.0
15 TraesCS2D01G213000 chr7D 84.685 444 39 13 1711 2148 404389576 404389156 3.390000e-112 416.0
16 TraesCS2D01G213000 chrUn 83.969 393 47 13 2177 2558 137776646 137777033 4.480000e-96 363.0
17 TraesCS2D01G213000 chrUn 81.448 442 46 16 1711 2148 37791761 37792170 4.540000e-86 329.0
18 TraesCS2D01G213000 chrUn 81.448 442 46 16 1711 2148 292153485 292153076 4.540000e-86 329.0
19 TraesCS2D01G213000 chr7A 82.979 282 28 13 2277 2555 133673730 133673994 2.830000e-58 237.0
20 TraesCS2D01G213000 chr3D 87.647 170 20 1 1 169 127657516 127657347 4.810000e-46 196.0
21 TraesCS2D01G213000 chr5D 86.391 169 23 0 1 169 416230431 416230599 1.040000e-42 185.0
22 TraesCS2D01G213000 chr5D 81.657 169 31 0 1 169 407985544 407985712 2.280000e-29 141.0
23 TraesCS2D01G213000 chr4D 77.673 318 45 10 8 300 287541290 287540974 2.910000e-38 171.0
24 TraesCS2D01G213000 chr6B 81.657 169 31 0 1 169 46875638 46875806 2.280000e-29 141.0
25 TraesCS2D01G213000 chr3B 93.023 86 6 0 4 89 181679516 181679431 6.400000e-25 126.0
26 TraesCS2D01G213000 chr1D 94.118 68 4 0 457 524 326979452 326979385 3.000000e-18 104.0
27 TraesCS2D01G213000 chr1D 100.000 31 0 0 534 564 395081704 395081674 2.370000e-04 58.4
28 TraesCS2D01G213000 chr1B 94.118 68 4 0 457 524 441664012 441663945 3.000000e-18 104.0
29 TraesCS2D01G213000 chr1A 92.647 68 5 0 457 524 409788487 409788554 1.390000e-16 99.0
30 TraesCS2D01G213000 chr1A 96.875 32 1 0 534 565 489396549 489396518 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G213000 chr2D 172821300 172827379 6079 True 3818.000000 11228 94.936667 1 6080 3 chr2D.!!$R1 6079
1 TraesCS2D01G213000 chr2A 177004444 177009891 5447 False 2733.666667 7210 94.445333 581 6078 3 chr2A.!!$F2 5497
2 TraesCS2D01G213000 chr2B 225357787 225362784 4997 False 2518.333333 3999 93.752000 581 5407 3 chr2B.!!$F1 4826
3 TraesCS2D01G213000 chr2B 225432406 225433070 664 False 423.750000 767 91.396000 5467 6080 2 chr2B.!!$F2 613
4 TraesCS2D01G213000 chr6A 535383318 535384154 836 False 819.000000 819 84.651000 1715 2555 1 chr6A.!!$F1 840
5 TraesCS2D01G213000 chr5A 472477883 472478694 811 False 743.000000 743 83.372000 1715 2558 1 chr5A.!!$F1 843

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.030908 CTCAAGAGGGGATACGACGC 59.969 60.000 0.00 0.00 37.60 5.19 F
799 815 0.032815 AAAATCCAAAACCCACGCCG 59.967 50.000 0.00 0.00 0.00 6.46 F
810 826 0.039527 CCCACGCCGAAAGAAAAAGG 60.040 55.000 0.00 0.00 0.00 3.11 F
1492 1522 0.179137 TTCGTACGGATGCAGAGCAG 60.179 55.000 16.52 0.00 43.65 4.24 F
1645 1675 1.000843 TGTGAGCGTAGATTGTGCTGT 59.999 47.619 0.00 0.00 39.49 4.40 F
2901 2949 0.264359 CAGGGGAGAGAGATGGAGGT 59.736 60.000 0.00 0.00 0.00 3.85 F
3292 3518 0.172127 TGCAGTCTGTGATCGAGAGC 59.828 55.000 0.93 0.00 0.00 4.09 F
4585 4812 0.743345 TGCTGCTGCAGTGATAGCTG 60.743 55.000 28.50 17.07 45.31 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1404 1434 0.539669 AAACCCTAGCCAGCACCAAC 60.540 55.000 0.0 0.0 0.00 3.77 R
1827 1857 0.593128 AATTCTGCAACCTGTGTCGC 59.407 50.000 0.0 0.0 0.00 5.19 R
1919 1951 1.189227 GTGTTCAAAATGTTTCGGCGC 59.811 47.619 0.0 0.0 0.00 6.53 R
2863 2911 1.153086 CCTCATGCCCTTCCCTTCG 60.153 63.158 0.0 0.0 0.00 3.79 R
3292 3518 4.913335 ATCATGTTTGCTATTGCTGAGG 57.087 40.909 0.0 0.0 40.48 3.86 R
4576 4803 0.177604 ACAGGCTCAGCAGCTATCAC 59.822 55.000 0.0 0.0 46.03 3.06 R
4821 5063 0.388006 CACGAGGCACATGACGTACA 60.388 55.000 0.0 0.0 37.22 2.90 R
5603 5968 0.473117 TTCTTGGTTCCCTCCCTCGT 60.473 55.000 0.0 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.761174 TCCACTTGTCCCTCTTGCC 59.239 57.895 0.00 0.00 0.00 4.52
19 20 1.059584 TCCACTTGTCCCTCTTGCCA 61.060 55.000 0.00 0.00 0.00 4.92
20 21 0.178992 CCACTTGTCCCTCTTGCCAA 60.179 55.000 0.00 0.00 0.00 4.52
21 22 1.548582 CCACTTGTCCCTCTTGCCAAT 60.549 52.381 0.00 0.00 0.00 3.16
22 23 1.542915 CACTTGTCCCTCTTGCCAATG 59.457 52.381 0.00 0.00 0.00 2.82
23 24 0.529378 CTTGTCCCTCTTGCCAATGC 59.471 55.000 0.00 0.00 38.26 3.56
24 25 0.899717 TTGTCCCTCTTGCCAATGCC 60.900 55.000 0.00 0.00 36.33 4.40
25 26 2.054453 GTCCCTCTTGCCAATGCCC 61.054 63.158 0.00 0.00 36.33 5.36
26 27 2.240918 TCCCTCTTGCCAATGCCCT 61.241 57.895 0.00 0.00 36.33 5.19
27 28 2.056223 CCCTCTTGCCAATGCCCTG 61.056 63.158 0.00 0.00 36.33 4.45
28 29 2.718073 CCTCTTGCCAATGCCCTGC 61.718 63.158 0.00 0.00 36.33 4.85
29 30 1.681327 CTCTTGCCAATGCCCTGCT 60.681 57.895 0.00 0.00 36.33 4.24
30 31 1.945354 CTCTTGCCAATGCCCTGCTG 61.945 60.000 0.00 0.00 36.33 4.41
31 32 2.203669 TTGCCAATGCCCTGCTGT 60.204 55.556 0.00 0.00 36.33 4.40
32 33 0.966875 CTTGCCAATGCCCTGCTGTA 60.967 55.000 0.00 0.00 36.33 2.74
33 34 0.541530 TTGCCAATGCCCTGCTGTAA 60.542 50.000 0.00 0.00 36.33 2.41
34 35 0.541530 TGCCAATGCCCTGCTGTAAA 60.542 50.000 0.00 0.00 36.33 2.01
35 36 0.174162 GCCAATGCCCTGCTGTAAAG 59.826 55.000 0.00 0.00 0.00 1.85
36 37 1.838112 CCAATGCCCTGCTGTAAAGA 58.162 50.000 0.00 0.00 0.00 2.52
37 38 1.474077 CCAATGCCCTGCTGTAAAGAC 59.526 52.381 0.00 0.00 0.00 3.01
38 39 2.161855 CAATGCCCTGCTGTAAAGACA 58.838 47.619 0.00 0.00 0.00 3.41
39 40 2.557924 CAATGCCCTGCTGTAAAGACAA 59.442 45.455 0.00 0.00 34.35 3.18
40 41 2.356665 TGCCCTGCTGTAAAGACAAA 57.643 45.000 0.00 0.00 34.35 2.83
41 42 2.229792 TGCCCTGCTGTAAAGACAAAG 58.770 47.619 0.00 0.00 34.35 2.77
42 43 1.068264 GCCCTGCTGTAAAGACAAAGC 60.068 52.381 0.00 0.00 34.35 3.51
43 44 1.541588 CCCTGCTGTAAAGACAAAGCC 59.458 52.381 0.00 0.00 34.35 4.35
44 45 1.541588 CCTGCTGTAAAGACAAAGCCC 59.458 52.381 0.00 0.00 34.35 5.19
45 46 2.508526 CTGCTGTAAAGACAAAGCCCT 58.491 47.619 0.00 0.00 34.35 5.19
46 47 2.485814 CTGCTGTAAAGACAAAGCCCTC 59.514 50.000 0.00 0.00 34.35 4.30
47 48 2.158682 TGCTGTAAAGACAAAGCCCTCA 60.159 45.455 0.00 0.00 34.35 3.86
48 49 2.884639 GCTGTAAAGACAAAGCCCTCAA 59.115 45.455 0.00 0.00 34.35 3.02
49 50 3.057946 GCTGTAAAGACAAAGCCCTCAAG 60.058 47.826 0.00 0.00 34.35 3.02
50 51 4.389374 CTGTAAAGACAAAGCCCTCAAGA 58.611 43.478 0.00 0.00 34.35 3.02
51 52 4.389374 TGTAAAGACAAAGCCCTCAAGAG 58.611 43.478 0.00 0.00 30.68 2.85
52 53 4.746702 TGTAAAGACAAAGCCCTCAAGAGG 60.747 45.833 9.20 9.20 39.48 3.69
62 63 0.669077 CCTCAAGAGGGGATACGACG 59.331 60.000 8.28 0.00 44.87 5.12
63 64 0.030908 CTCAAGAGGGGATACGACGC 59.969 60.000 0.00 0.00 37.60 5.19
64 65 1.067582 CAAGAGGGGATACGACGCC 59.932 63.158 0.00 0.00 42.13 5.68
65 66 1.380785 AAGAGGGGATACGACGCCA 60.381 57.895 14.31 0.00 43.85 5.69
66 67 0.974010 AAGAGGGGATACGACGCCAA 60.974 55.000 14.31 0.00 43.85 4.52
67 68 1.067582 GAGGGGATACGACGCCAAG 59.932 63.158 14.31 0.00 43.85 3.61
68 69 2.108362 GGGGATACGACGCCAAGG 59.892 66.667 0.00 0.00 41.56 3.61
69 70 2.588034 GGGATACGACGCCAAGGC 60.588 66.667 0.00 0.00 35.70 4.35
70 71 2.185867 GGATACGACGCCAAGGCA 59.814 61.111 12.19 0.00 42.06 4.75
71 72 2.171725 GGATACGACGCCAAGGCAC 61.172 63.158 12.19 3.69 42.06 5.01
72 73 2.125269 ATACGACGCCAAGGCACC 60.125 61.111 12.19 0.84 42.06 5.01
73 74 4.728102 TACGACGCCAAGGCACCG 62.728 66.667 12.19 14.96 42.06 4.94
86 87 2.892425 CACCGCCTTCGCCTGATC 60.892 66.667 0.00 0.00 0.00 2.92
87 88 3.390521 ACCGCCTTCGCCTGATCA 61.391 61.111 0.00 0.00 0.00 2.92
88 89 2.892425 CCGCCTTCGCCTGATCAC 60.892 66.667 0.00 0.00 0.00 3.06
89 90 3.257561 CGCCTTCGCCTGATCACG 61.258 66.667 0.00 0.00 0.00 4.35
90 91 3.567797 GCCTTCGCCTGATCACGC 61.568 66.667 6.62 6.62 0.00 5.34
101 102 4.601042 ATCACGCGGATCTAGGGT 57.399 55.556 12.47 5.82 35.05 4.34
102 103 2.822215 ATCACGCGGATCTAGGGTT 58.178 52.632 12.47 0.00 32.26 4.11
103 104 0.674534 ATCACGCGGATCTAGGGTTC 59.325 55.000 12.47 0.00 32.26 3.62
104 105 1.067582 CACGCGGATCTAGGGTTCC 59.932 63.158 12.47 0.00 32.26 3.62
105 106 2.132352 ACGCGGATCTAGGGTTCCC 61.132 63.158 12.47 0.00 0.00 3.97
106 107 2.868986 CGCGGATCTAGGGTTCCCC 61.869 68.421 0.00 0.00 45.90 4.81
121 122 2.679092 CCCCCAGAGCTGCATTGA 59.321 61.111 1.02 0.00 0.00 2.57
122 123 1.751927 CCCCCAGAGCTGCATTGAC 60.752 63.158 1.02 0.00 0.00 3.18
123 124 1.751927 CCCCAGAGCTGCATTGACC 60.752 63.158 1.02 0.00 0.00 4.02
124 125 2.110967 CCCAGAGCTGCATTGACCG 61.111 63.158 1.02 0.00 0.00 4.79
125 126 1.078918 CCAGAGCTGCATTGACCGA 60.079 57.895 1.02 0.00 0.00 4.69
126 127 1.364626 CCAGAGCTGCATTGACCGAC 61.365 60.000 1.02 0.00 0.00 4.79
127 128 1.078848 AGAGCTGCATTGACCGACC 60.079 57.895 1.02 0.00 0.00 4.79
128 129 1.078848 GAGCTGCATTGACCGACCT 60.079 57.895 1.02 0.00 0.00 3.85
129 130 0.175760 GAGCTGCATTGACCGACCTA 59.824 55.000 1.02 0.00 0.00 3.08
130 131 0.833287 AGCTGCATTGACCGACCTAT 59.167 50.000 1.02 0.00 0.00 2.57
131 132 0.940126 GCTGCATTGACCGACCTATG 59.060 55.000 0.00 0.00 0.00 2.23
132 133 0.940126 CTGCATTGACCGACCTATGC 59.060 55.000 13.23 13.23 42.75 3.14
133 134 0.463654 TGCATTGACCGACCTATGCC 60.464 55.000 15.85 4.60 41.98 4.40
134 135 1.166531 GCATTGACCGACCTATGCCC 61.167 60.000 10.47 0.00 37.90 5.36
135 136 0.880278 CATTGACCGACCTATGCCCG 60.880 60.000 0.00 0.00 0.00 6.13
136 137 1.046472 ATTGACCGACCTATGCCCGA 61.046 55.000 0.00 0.00 0.00 5.14
137 138 1.672854 TTGACCGACCTATGCCCGAG 61.673 60.000 0.00 0.00 0.00 4.63
138 139 2.838225 ACCGACCTATGCCCGAGG 60.838 66.667 0.00 0.00 40.22 4.63
139 140 3.616721 CCGACCTATGCCCGAGGG 61.617 72.222 3.22 3.22 38.52 4.30
141 142 2.446036 GACCTATGCCCGAGGGGT 60.446 66.667 10.61 0.00 46.51 4.95
142 143 2.768344 ACCTATGCCCGAGGGGTG 60.768 66.667 10.61 0.00 46.51 4.61
143 144 3.560251 CCTATGCCCGAGGGGTGG 61.560 72.222 10.61 0.00 46.51 4.61
151 152 3.646715 CGAGGGGTGGGGAAGCAA 61.647 66.667 0.00 0.00 0.00 3.91
152 153 2.356667 GAGGGGTGGGGAAGCAAG 59.643 66.667 0.00 0.00 0.00 4.01
153 154 2.121506 AGGGGTGGGGAAGCAAGA 60.122 61.111 0.00 0.00 0.00 3.02
154 155 2.035783 GGGGTGGGGAAGCAAGAC 59.964 66.667 0.00 0.00 0.00 3.01
155 156 2.840753 GGGGTGGGGAAGCAAGACA 61.841 63.158 0.00 0.00 0.00 3.41
156 157 1.152830 GGGTGGGGAAGCAAGACAA 59.847 57.895 0.00 0.00 0.00 3.18
157 158 1.179174 GGGTGGGGAAGCAAGACAAC 61.179 60.000 0.00 0.00 0.00 3.32
158 159 1.515521 GGTGGGGAAGCAAGACAACG 61.516 60.000 0.00 0.00 0.00 4.10
159 160 0.534203 GTGGGGAAGCAAGACAACGA 60.534 55.000 0.00 0.00 0.00 3.85
160 161 0.400213 TGGGGAAGCAAGACAACGAT 59.600 50.000 0.00 0.00 0.00 3.73
161 162 0.804989 GGGGAAGCAAGACAACGATG 59.195 55.000 0.00 0.00 0.00 3.84
162 163 0.169009 GGGAAGCAAGACAACGATGC 59.831 55.000 0.00 0.00 40.34 3.91
163 164 0.169009 GGAAGCAAGACAACGATGCC 59.831 55.000 0.00 0.00 40.93 4.40
164 165 1.160137 GAAGCAAGACAACGATGCCT 58.840 50.000 0.00 0.00 40.93 4.75
165 166 1.537202 GAAGCAAGACAACGATGCCTT 59.463 47.619 0.00 0.00 40.93 4.35
166 167 1.160137 AGCAAGACAACGATGCCTTC 58.840 50.000 0.00 0.00 40.93 3.46
167 168 0.874390 GCAAGACAACGATGCCTTCA 59.126 50.000 0.00 0.00 34.03 3.02
168 169 1.266718 GCAAGACAACGATGCCTTCAA 59.733 47.619 0.00 0.00 34.03 2.69
169 170 2.287547 GCAAGACAACGATGCCTTCAAA 60.288 45.455 0.00 0.00 34.03 2.69
170 171 3.558505 CAAGACAACGATGCCTTCAAAG 58.441 45.455 0.00 0.00 25.17 2.77
180 181 2.556286 CCTTCAAAGGCCGAAGACC 58.444 57.895 17.60 0.00 42.05 3.85
181 182 0.250727 CCTTCAAAGGCCGAAGACCA 60.251 55.000 17.60 0.00 42.05 4.02
182 183 1.604604 CTTCAAAGGCCGAAGACCAA 58.395 50.000 12.18 0.00 42.05 3.67
183 184 1.537202 CTTCAAAGGCCGAAGACCAAG 59.463 52.381 12.18 0.00 42.05 3.61
184 185 0.762418 TCAAAGGCCGAAGACCAAGA 59.238 50.000 0.00 0.00 0.00 3.02
185 186 0.875059 CAAAGGCCGAAGACCAAGAC 59.125 55.000 0.00 0.00 0.00 3.01
186 187 0.472471 AAAGGCCGAAGACCAAGACA 59.528 50.000 0.00 0.00 0.00 3.41
187 188 0.693049 AAGGCCGAAGACCAAGACAT 59.307 50.000 0.00 0.00 0.00 3.06
188 189 0.036010 AGGCCGAAGACCAAGACATG 60.036 55.000 0.00 0.00 0.00 3.21
216 217 3.154589 GGAGATTCCGAACACCACC 57.845 57.895 0.00 0.00 0.00 4.61
217 218 0.613777 GGAGATTCCGAACACCACCT 59.386 55.000 0.00 0.00 0.00 4.00
218 219 1.405661 GGAGATTCCGAACACCACCTC 60.406 57.143 0.00 0.00 0.00 3.85
219 220 1.275291 GAGATTCCGAACACCACCTCA 59.725 52.381 0.00 0.00 0.00 3.86
220 221 1.697432 AGATTCCGAACACCACCTCAA 59.303 47.619 0.00 0.00 0.00 3.02
221 222 2.305927 AGATTCCGAACACCACCTCAAT 59.694 45.455 0.00 0.00 0.00 2.57
222 223 1.890876 TTCCGAACACCACCTCAATG 58.109 50.000 0.00 0.00 0.00 2.82
223 224 1.052617 TCCGAACACCACCTCAATGA 58.947 50.000 0.00 0.00 0.00 2.57
224 225 1.156736 CCGAACACCACCTCAATGAC 58.843 55.000 0.00 0.00 0.00 3.06
225 226 1.156736 CGAACACCACCTCAATGACC 58.843 55.000 0.00 0.00 0.00 4.02
226 227 1.534729 GAACACCACCTCAATGACCC 58.465 55.000 0.00 0.00 0.00 4.46
227 228 0.850100 AACACCACCTCAATGACCCA 59.150 50.000 0.00 0.00 0.00 4.51
228 229 0.110486 ACACCACCTCAATGACCCAC 59.890 55.000 0.00 0.00 0.00 4.61
229 230 0.110295 CACCACCTCAATGACCCACA 59.890 55.000 0.00 0.00 0.00 4.17
230 231 0.110486 ACCACCTCAATGACCCACAC 59.890 55.000 0.00 0.00 0.00 3.82
231 232 0.110295 CCACCTCAATGACCCACACA 59.890 55.000 0.00 0.00 0.00 3.72
232 233 1.527034 CACCTCAATGACCCACACAG 58.473 55.000 0.00 0.00 0.00 3.66
233 234 0.401738 ACCTCAATGACCCACACAGG 59.598 55.000 0.00 0.00 32.49 4.00
234 235 0.401738 CCTCAATGACCCACACAGGT 59.598 55.000 0.00 0.00 45.12 4.00
235 236 1.527034 CTCAATGACCCACACAGGTG 58.473 55.000 0.00 0.00 41.42 4.00
236 237 0.843309 TCAATGACCCACACAGGTGT 59.157 50.000 0.00 0.00 46.17 4.16
237 238 1.214175 TCAATGACCCACACAGGTGTT 59.786 47.619 1.58 0.00 42.83 3.32
238 239 1.337703 CAATGACCCACACAGGTGTTG 59.662 52.381 1.58 0.00 42.83 3.33
240 241 2.123897 ACCCACACAGGTGTTGGC 60.124 61.111 19.32 0.00 46.83 4.52
241 242 2.123939 CCCACACAGGTGTTGGCA 60.124 61.111 9.43 0.00 42.83 4.92
242 243 1.756172 CCCACACAGGTGTTGGCAA 60.756 57.895 9.43 0.00 42.83 4.52
243 244 1.735360 CCACACAGGTGTTGGCAAG 59.265 57.895 0.00 0.00 42.83 4.01
244 245 0.751277 CCACACAGGTGTTGGCAAGA 60.751 55.000 0.00 0.00 42.83 3.02
245 246 0.381801 CACACAGGTGTTGGCAAGAC 59.618 55.000 18.39 18.39 42.83 3.01
246 247 0.751643 ACACAGGTGTTGGCAAGACC 60.752 55.000 32.79 32.79 44.76 3.85
254 255 4.268720 TGGCAAGACCACCAAACC 57.731 55.556 0.00 0.00 46.36 3.27
255 256 1.307986 TGGCAAGACCACCAAACCA 59.692 52.632 0.00 0.00 46.36 3.67
256 257 0.324738 TGGCAAGACCACCAAACCAA 60.325 50.000 0.00 0.00 46.36 3.67
257 258 0.389025 GGCAAGACCACCAAACCAAG 59.611 55.000 0.00 0.00 38.86 3.61
258 259 0.389025 GCAAGACCACCAAACCAAGG 59.611 55.000 0.00 0.00 0.00 3.61
259 260 2.026905 GCAAGACCACCAAACCAAGGA 61.027 52.381 0.00 0.00 0.00 3.36
260 261 1.681264 CAAGACCACCAAACCAAGGAC 59.319 52.381 0.00 0.00 0.00 3.85
261 262 0.923358 AGACCACCAAACCAAGGACA 59.077 50.000 0.00 0.00 0.00 4.02
262 263 1.286553 AGACCACCAAACCAAGGACAA 59.713 47.619 0.00 0.00 0.00 3.18
263 264 1.407618 GACCACCAAACCAAGGACAAC 59.592 52.381 0.00 0.00 0.00 3.32
264 265 0.750249 CCACCAAACCAAGGACAACC 59.250 55.000 0.00 0.00 0.00 3.77
265 266 0.750249 CACCAAACCAAGGACAACCC 59.250 55.000 0.00 0.00 36.73 4.11
266 267 0.753848 ACCAAACCAAGGACAACCCG 60.754 55.000 0.00 0.00 40.87 5.28
267 268 0.753848 CCAAACCAAGGACAACCCGT 60.754 55.000 0.00 0.00 40.87 5.28
268 269 0.666374 CAAACCAAGGACAACCCGTC 59.334 55.000 0.00 0.00 44.57 4.79
269 270 0.816421 AAACCAAGGACAACCCGTCG 60.816 55.000 0.00 0.00 46.42 5.12
270 271 1.688269 AACCAAGGACAACCCGTCGA 61.688 55.000 0.00 0.00 46.42 4.20
271 272 1.666872 CCAAGGACAACCCGTCGAC 60.667 63.158 5.18 5.18 46.42 4.20
272 273 2.019951 CAAGGACAACCCGTCGACG 61.020 63.158 30.33 30.33 46.42 5.12
273 274 2.195567 AAGGACAACCCGTCGACGA 61.196 57.895 37.65 0.00 46.42 4.20
274 275 1.737355 AAGGACAACCCGTCGACGAA 61.737 55.000 37.65 0.00 46.42 3.85
275 276 1.731969 GGACAACCCGTCGACGAAG 60.732 63.158 37.65 28.62 46.42 3.79
276 277 1.283793 GACAACCCGTCGACGAAGA 59.716 57.895 37.65 0.00 43.02 2.87
277 278 0.728466 GACAACCCGTCGACGAAGAG 60.728 60.000 37.65 24.90 43.02 2.85
278 279 1.168407 ACAACCCGTCGACGAAGAGA 61.168 55.000 37.65 0.00 43.02 3.10
279 280 0.728466 CAACCCGTCGACGAAGAGAC 60.728 60.000 37.65 0.00 43.02 3.36
280 281 1.168407 AACCCGTCGACGAAGAGACA 61.168 55.000 37.65 0.00 43.02 3.41
281 282 1.154263 CCCGTCGACGAAGAGACAC 60.154 63.158 37.65 0.00 43.02 3.67
282 283 1.572941 CCGTCGACGAAGAGACACA 59.427 57.895 37.65 0.00 43.02 3.72
283 284 0.040692 CCGTCGACGAAGAGACACAA 60.041 55.000 37.65 0.00 43.02 3.33
284 285 1.598676 CCGTCGACGAAGAGACACAAA 60.599 52.381 37.65 0.00 43.02 2.83
285 286 1.709203 CGTCGACGAAGAGACACAAAG 59.291 52.381 33.35 0.00 43.02 2.77
286 287 2.728922 GTCGACGAAGAGACACAAAGT 58.271 47.619 0.00 0.00 38.20 2.66
287 288 3.605461 CGTCGACGAAGAGACACAAAGTA 60.605 47.826 33.35 0.00 43.02 2.24
288 289 3.907194 GTCGACGAAGAGACACAAAGTAG 59.093 47.826 0.00 0.00 38.20 2.57
289 290 2.657372 CGACGAAGAGACACAAAGTAGC 59.343 50.000 0.00 0.00 0.00 3.58
290 291 2.987821 GACGAAGAGACACAAAGTAGCC 59.012 50.000 0.00 0.00 0.00 3.93
291 292 1.986378 CGAAGAGACACAAAGTAGCCG 59.014 52.381 0.00 0.00 0.00 5.52
292 293 2.338500 GAAGAGACACAAAGTAGCCGG 58.662 52.381 0.00 0.00 0.00 6.13
293 294 0.037232 AGAGACACAAAGTAGCCGGC 60.037 55.000 21.89 21.89 0.00 6.13
294 295 1.003718 AGACACAAAGTAGCCGGCC 60.004 57.895 26.15 9.10 0.00 6.13
295 296 2.358247 ACACAAAGTAGCCGGCCG 60.358 61.111 26.15 21.04 0.00 6.13
296 297 3.799755 CACAAAGTAGCCGGCCGC 61.800 66.667 26.15 16.85 37.98 6.53
297 298 4.323477 ACAAAGTAGCCGGCCGCA 62.323 61.111 26.15 5.71 41.38 5.69
298 299 3.799755 CAAAGTAGCCGGCCGCAC 61.800 66.667 26.15 18.99 41.38 5.34
308 309 2.049063 GGCCGCACCGATAGCTAG 60.049 66.667 0.00 0.00 0.00 3.42
309 310 2.049063 GCCGCACCGATAGCTAGG 60.049 66.667 0.00 0.00 0.00 3.02
310 311 2.561956 GCCGCACCGATAGCTAGGA 61.562 63.158 6.05 0.00 0.00 2.94
311 312 1.581954 CCGCACCGATAGCTAGGAG 59.418 63.158 6.05 0.00 0.00 3.69
312 313 0.889638 CCGCACCGATAGCTAGGAGA 60.890 60.000 6.05 0.00 0.00 3.71
313 314 0.238817 CGCACCGATAGCTAGGAGAC 59.761 60.000 6.05 0.00 0.00 3.36
314 315 0.599060 GCACCGATAGCTAGGAGACC 59.401 60.000 6.05 0.00 0.00 3.85
315 316 1.820090 GCACCGATAGCTAGGAGACCT 60.820 57.143 6.05 0.00 37.71 3.85
316 317 2.552591 GCACCGATAGCTAGGAGACCTA 60.553 54.545 6.05 0.00 34.61 3.08
325 326 3.926729 AGGAGACCTAGGCAATCGA 57.073 52.632 9.30 0.00 28.47 3.59
326 327 2.390225 AGGAGACCTAGGCAATCGAT 57.610 50.000 9.30 0.00 28.47 3.59
327 328 1.967066 AGGAGACCTAGGCAATCGATG 59.033 52.381 9.30 0.00 28.47 3.84
328 329 1.964223 GGAGACCTAGGCAATCGATGA 59.036 52.381 9.30 0.00 0.00 2.92
329 330 2.288518 GGAGACCTAGGCAATCGATGAC 60.289 54.545 9.30 0.00 37.30 3.06
330 331 1.338337 AGACCTAGGCAATCGATGACG 59.662 52.381 9.30 0.00 44.22 4.35
340 341 3.188773 TCGATGACGAGTTTTGCGT 57.811 47.368 0.00 0.00 43.81 5.24
341 342 0.781787 TCGATGACGAGTTTTGCGTG 59.218 50.000 0.00 0.00 43.81 5.34
342 343 0.179250 CGATGACGAGTTTTGCGTGG 60.179 55.000 0.00 0.00 42.77 4.94
343 344 1.144969 GATGACGAGTTTTGCGTGGA 58.855 50.000 0.00 0.00 42.77 4.02
344 345 0.865769 ATGACGAGTTTTGCGTGGAC 59.134 50.000 0.00 0.00 42.77 4.02
345 346 0.179094 TGACGAGTTTTGCGTGGACT 60.179 50.000 0.00 0.00 42.77 3.85
346 347 0.935196 GACGAGTTTTGCGTGGACTT 59.065 50.000 0.00 0.00 42.77 3.01
347 348 0.935196 ACGAGTTTTGCGTGGACTTC 59.065 50.000 0.00 0.00 40.94 3.01
348 349 0.111266 CGAGTTTTGCGTGGACTTCG 60.111 55.000 0.00 0.00 0.00 3.79
349 350 0.234884 GAGTTTTGCGTGGACTTCGG 59.765 55.000 0.00 0.00 0.00 4.30
350 351 1.370051 GTTTTGCGTGGACTTCGGC 60.370 57.895 0.00 0.00 0.00 5.54
351 352 1.525077 TTTTGCGTGGACTTCGGCT 60.525 52.632 0.00 0.00 0.00 5.52
352 353 0.249953 TTTTGCGTGGACTTCGGCTA 60.250 50.000 0.00 0.00 0.00 3.93
353 354 0.036765 TTTGCGTGGACTTCGGCTAT 60.037 50.000 0.00 0.00 0.00 2.97
354 355 0.459585 TTGCGTGGACTTCGGCTATC 60.460 55.000 0.00 0.00 0.00 2.08
355 356 1.944676 GCGTGGACTTCGGCTATCG 60.945 63.158 0.00 0.00 40.90 2.92
356 357 1.944676 CGTGGACTTCGGCTATCGC 60.945 63.158 0.00 0.00 39.05 4.58
381 382 4.308899 CGAAGGACATGGTAGACCTTAG 57.691 50.000 0.00 0.00 42.33 2.18
382 383 3.068307 CGAAGGACATGGTAGACCTTAGG 59.932 52.174 0.00 0.00 42.33 2.69
383 384 4.287552 GAAGGACATGGTAGACCTTAGGA 58.712 47.826 4.77 0.00 42.33 2.94
384 385 4.561254 AGGACATGGTAGACCTTAGGAT 57.439 45.455 4.77 0.00 36.82 3.24
385 386 5.681494 AGGACATGGTAGACCTTAGGATA 57.319 43.478 4.77 0.00 36.82 2.59
386 387 6.039415 AGGACATGGTAGACCTTAGGATAA 57.961 41.667 4.77 0.00 36.82 1.75
387 388 5.839606 AGGACATGGTAGACCTTAGGATAAC 59.160 44.000 4.77 0.58 36.82 1.89
388 389 5.011840 GGACATGGTAGACCTTAGGATAACC 59.988 48.000 4.77 9.31 36.82 2.85
389 390 4.906060 ACATGGTAGACCTTAGGATAACCC 59.094 45.833 4.77 0.00 35.14 4.11
390 391 4.913154 TGGTAGACCTTAGGATAACCCT 57.087 45.455 4.77 0.00 42.17 4.34
391 392 6.125681 ACATGGTAGACCTTAGGATAACCCTA 60.126 42.308 4.77 0.00 45.59 3.53
415 416 2.150397 ACGTAGTTCTGTGTTGAGCC 57.850 50.000 0.00 0.00 37.78 4.70
416 417 1.411246 ACGTAGTTCTGTGTTGAGCCA 59.589 47.619 0.00 0.00 37.78 4.75
417 418 1.792949 CGTAGTTCTGTGTTGAGCCAC 59.207 52.381 0.00 0.00 35.86 5.01
418 419 2.801699 CGTAGTTCTGTGTTGAGCCACA 60.802 50.000 0.00 0.00 42.81 4.17
419 420 1.668419 AGTTCTGTGTTGAGCCACAC 58.332 50.000 4.79 4.79 46.32 3.82
425 426 2.105323 GTGTTGAGCCACACGAAAAG 57.895 50.000 0.00 0.00 37.90 2.27
426 427 1.400494 GTGTTGAGCCACACGAAAAGT 59.600 47.619 0.00 0.00 37.90 2.66
427 428 2.088423 TGTTGAGCCACACGAAAAGTT 58.912 42.857 0.00 0.00 0.00 2.66
428 429 2.096819 TGTTGAGCCACACGAAAAGTTC 59.903 45.455 0.00 0.00 0.00 3.01
429 430 2.325583 TGAGCCACACGAAAAGTTCT 57.674 45.000 0.00 0.00 0.00 3.01
430 431 1.939934 TGAGCCACACGAAAAGTTCTG 59.060 47.619 0.00 0.00 0.00 3.02
431 432 1.940613 GAGCCACACGAAAAGTTCTGT 59.059 47.619 0.00 0.00 0.00 3.41
432 433 3.128349 GAGCCACACGAAAAGTTCTGTA 58.872 45.455 0.00 0.00 0.00 2.74
433 434 3.740115 AGCCACACGAAAAGTTCTGTAT 58.260 40.909 0.00 0.00 0.00 2.29
434 435 4.890088 AGCCACACGAAAAGTTCTGTATA 58.110 39.130 0.00 0.00 0.00 1.47
435 436 5.488341 AGCCACACGAAAAGTTCTGTATAT 58.512 37.500 0.00 0.00 0.00 0.86
436 437 5.938125 AGCCACACGAAAAGTTCTGTATATT 59.062 36.000 0.00 0.00 0.00 1.28
437 438 6.021596 GCCACACGAAAAGTTCTGTATATTG 58.978 40.000 0.00 0.00 0.00 1.90
438 439 6.128391 GCCACACGAAAAGTTCTGTATATTGA 60.128 38.462 0.00 0.00 0.00 2.57
439 440 7.414098 GCCACACGAAAAGTTCTGTATATTGAT 60.414 37.037 0.00 0.00 0.00 2.57
440 441 8.450964 CCACACGAAAAGTTCTGTATATTGATT 58.549 33.333 0.00 0.00 0.00 2.57
441 442 9.825972 CACACGAAAAGTTCTGTATATTGATTT 57.174 29.630 0.00 0.00 0.00 2.17
468 469 8.893563 AGGTAAAACAATCCAAAATATCAGGA 57.106 30.769 0.00 0.00 35.59 3.86
469 470 8.971073 AGGTAAAACAATCCAAAATATCAGGAG 58.029 33.333 0.00 0.00 34.40 3.69
470 471 8.966868 GGTAAAACAATCCAAAATATCAGGAGA 58.033 33.333 0.00 0.00 34.40 3.71
473 474 6.645790 ACAATCCAAAATATCAGGAGATGC 57.354 37.500 0.00 0.00 35.67 3.91
474 475 6.371278 ACAATCCAAAATATCAGGAGATGCT 58.629 36.000 0.00 0.00 35.67 3.79
475 476 7.520798 ACAATCCAAAATATCAGGAGATGCTA 58.479 34.615 0.00 0.00 35.67 3.49
476 477 8.168725 ACAATCCAAAATATCAGGAGATGCTAT 58.831 33.333 0.00 0.00 35.67 2.97
477 478 8.459635 CAATCCAAAATATCAGGAGATGCTATG 58.540 37.037 0.00 0.00 35.67 2.23
478 479 6.479006 TCCAAAATATCAGGAGATGCTATGG 58.521 40.000 0.00 0.00 35.67 2.74
479 480 5.125097 CCAAAATATCAGGAGATGCTATGGC 59.875 44.000 0.00 0.00 35.67 4.40
480 481 4.500499 AATATCAGGAGATGCTATGGCC 57.500 45.455 0.00 0.00 37.74 5.36
481 482 1.738474 ATCAGGAGATGCTATGGCCA 58.262 50.000 8.56 8.56 37.74 5.36
482 483 0.761187 TCAGGAGATGCTATGGCCAC 59.239 55.000 8.16 0.00 37.74 5.01
483 484 0.763652 CAGGAGATGCTATGGCCACT 59.236 55.000 8.16 0.00 37.74 4.00
484 485 0.763652 AGGAGATGCTATGGCCACTG 59.236 55.000 8.16 4.72 37.74 3.66
485 486 0.888285 GGAGATGCTATGGCCACTGC 60.888 60.000 21.03 21.03 37.74 4.40
496 497 2.785868 GCCACTGCCTGTCCTAATG 58.214 57.895 0.00 0.00 0.00 1.90
497 498 0.749454 GCCACTGCCTGTCCTAATGG 60.749 60.000 0.00 0.00 0.00 3.16
498 499 0.911769 CCACTGCCTGTCCTAATGGA 59.088 55.000 0.00 0.00 40.69 3.41
499 500 1.281867 CCACTGCCTGTCCTAATGGAA 59.718 52.381 0.00 0.00 45.18 3.53
500 501 2.636830 CACTGCCTGTCCTAATGGAAG 58.363 52.381 0.00 0.00 45.18 3.46
501 502 1.561542 ACTGCCTGTCCTAATGGAAGG 59.438 52.381 0.00 0.00 45.18 3.46
503 504 3.808984 CCTGTCCTAATGGAAGGCC 57.191 57.895 0.00 0.00 45.18 5.19
504 505 1.216990 CCTGTCCTAATGGAAGGCCT 58.783 55.000 0.00 0.00 45.18 5.19
505 506 1.566231 CCTGTCCTAATGGAAGGCCTT 59.434 52.381 20.65 20.65 45.18 4.35
506 507 2.422093 CCTGTCCTAATGGAAGGCCTTC 60.422 54.545 33.67 33.67 45.18 3.46
507 508 2.239654 CTGTCCTAATGGAAGGCCTTCA 59.760 50.000 39.29 27.62 45.18 3.02
508 509 2.239654 TGTCCTAATGGAAGGCCTTCAG 59.760 50.000 39.29 28.86 45.18 3.02
509 510 2.239907 GTCCTAATGGAAGGCCTTCAGT 59.760 50.000 39.29 27.58 45.18 3.41
510 511 2.919602 TCCTAATGGAAGGCCTTCAGTT 59.080 45.455 39.29 32.64 41.20 3.16
511 512 4.080526 GTCCTAATGGAAGGCCTTCAGTTA 60.081 45.833 39.29 32.14 45.18 2.24
512 513 4.726825 TCCTAATGGAAGGCCTTCAGTTAT 59.273 41.667 39.29 25.94 41.20 1.89
513 514 4.823989 CCTAATGGAAGGCCTTCAGTTATG 59.176 45.833 39.29 27.93 41.20 1.90
514 515 2.128771 TGGAAGGCCTTCAGTTATGC 57.871 50.000 39.29 23.84 41.20 3.14
515 516 1.635487 TGGAAGGCCTTCAGTTATGCT 59.365 47.619 39.29 6.92 41.20 3.79
516 517 2.293170 GGAAGGCCTTCAGTTATGCTC 58.707 52.381 39.29 19.68 41.20 4.26
517 518 2.356125 GGAAGGCCTTCAGTTATGCTCA 60.356 50.000 39.29 0.00 41.20 4.26
518 519 3.549794 GAAGGCCTTCAGTTATGCTCAT 58.450 45.455 35.71 1.51 39.31 2.90
519 520 2.928334 AGGCCTTCAGTTATGCTCATG 58.072 47.619 0.00 0.00 0.00 3.07
520 521 2.507058 AGGCCTTCAGTTATGCTCATGA 59.493 45.455 0.00 0.00 0.00 3.07
521 522 3.054139 AGGCCTTCAGTTATGCTCATGAA 60.054 43.478 0.00 0.00 0.00 2.57
522 523 3.887716 GGCCTTCAGTTATGCTCATGAAT 59.112 43.478 0.00 0.00 31.69 2.57
523 524 5.065914 GGCCTTCAGTTATGCTCATGAATA 58.934 41.667 0.00 0.00 31.69 1.75
524 525 5.049129 GGCCTTCAGTTATGCTCATGAATAC 60.049 44.000 0.00 0.00 31.69 1.89
525 526 5.528690 GCCTTCAGTTATGCTCATGAATACA 59.471 40.000 0.00 0.00 31.69 2.29
526 527 6.038603 GCCTTCAGTTATGCTCATGAATACAA 59.961 38.462 0.00 0.00 31.69 2.41
527 528 7.415541 GCCTTCAGTTATGCTCATGAATACAAA 60.416 37.037 0.00 0.00 31.69 2.83
528 529 8.461222 CCTTCAGTTATGCTCATGAATACAAAA 58.539 33.333 0.00 0.00 31.69 2.44
529 530 9.282247 CTTCAGTTATGCTCATGAATACAAAAC 57.718 33.333 0.00 0.00 31.69 2.43
530 531 8.565896 TCAGTTATGCTCATGAATACAAAACT 57.434 30.769 0.00 0.00 0.00 2.66
531 532 9.013229 TCAGTTATGCTCATGAATACAAAACTT 57.987 29.630 0.00 0.00 0.00 2.66
564 565 9.540538 TTTCATTATGAAAGTAATGGAAAGGGA 57.459 29.630 15.46 0.00 41.02 4.20
565 566 9.713684 TTCATTATGAAAGTAATGGAAAGGGAT 57.286 29.630 5.03 0.00 40.69 3.85
566 567 9.713684 TCATTATGAAAGTAATGGAAAGGGATT 57.286 29.630 0.00 0.00 40.69 3.01
570 571 7.896383 TGAAAGTAATGGAAAGGGATTATGG 57.104 36.000 0.00 0.00 0.00 2.74
571 572 6.323739 TGAAAGTAATGGAAAGGGATTATGGC 59.676 38.462 0.00 0.00 0.00 4.40
572 573 4.740902 AGTAATGGAAAGGGATTATGGCC 58.259 43.478 0.00 0.00 0.00 5.36
573 574 3.704545 AATGGAAAGGGATTATGGCCA 57.295 42.857 8.56 8.56 0.00 5.36
574 575 2.754012 TGGAAAGGGATTATGGCCAG 57.246 50.000 13.05 0.00 0.00 4.85
575 576 1.929494 TGGAAAGGGATTATGGCCAGT 59.071 47.619 13.05 0.00 0.00 4.00
576 577 2.314549 TGGAAAGGGATTATGGCCAGTT 59.685 45.455 13.05 0.00 0.00 3.16
577 578 3.529734 TGGAAAGGGATTATGGCCAGTTA 59.470 43.478 13.05 0.00 0.00 2.24
578 579 4.017037 TGGAAAGGGATTATGGCCAGTTAA 60.017 41.667 13.05 6.40 0.00 2.01
579 580 4.959839 GGAAAGGGATTATGGCCAGTTAAA 59.040 41.667 13.05 3.10 0.00 1.52
627 628 1.341209 TGTGCATCATAGACCCGCTAG 59.659 52.381 0.00 0.00 31.33 3.42
629 630 0.390472 GCATCATAGACCCGCTAGGC 60.390 60.000 0.00 0.00 40.58 3.93
630 631 0.969149 CATCATAGACCCGCTAGGCA 59.031 55.000 0.00 0.00 40.58 4.75
631 632 1.067283 CATCATAGACCCGCTAGGCAG 60.067 57.143 0.00 0.00 40.58 4.85
634 635 2.020100 ATAGACCCGCTAGGCAGGGA 62.020 60.000 19.98 4.84 42.08 4.20
635 636 2.642183 TAGACCCGCTAGGCAGGGAG 62.642 65.000 19.98 0.00 42.08 4.30
636 637 4.400251 ACCCGCTAGGCAGGGAGT 62.400 66.667 19.98 0.00 42.08 3.85
637 638 3.854669 CCCGCTAGGCAGGGAGTG 61.855 72.222 11.83 0.00 42.08 3.51
638 639 2.759973 CCGCTAGGCAGGGAGTGA 60.760 66.667 0.00 0.00 36.87 3.41
639 640 2.359169 CCGCTAGGCAGGGAGTGAA 61.359 63.158 0.00 0.00 36.87 3.18
640 641 1.142748 CGCTAGGCAGGGAGTGAAG 59.857 63.158 0.00 0.00 36.87 3.02
647 648 0.609406 GCAGGGAGTGAAGGGGAAAC 60.609 60.000 0.00 0.00 0.00 2.78
652 653 2.364324 GGGAGTGAAGGGGAAACAAAAC 59.636 50.000 0.00 0.00 0.00 2.43
672 673 1.861542 GCCATGTGCGTTGTTGCCTA 61.862 55.000 0.00 0.00 0.00 3.93
676 677 0.179070 TGTGCGTTGTTGCCTAGTCA 60.179 50.000 0.00 0.00 0.00 3.41
678 679 0.882927 TGCGTTGTTGCCTAGTCACC 60.883 55.000 0.00 0.00 0.00 4.02
679 680 0.882927 GCGTTGTTGCCTAGTCACCA 60.883 55.000 0.00 0.00 0.00 4.17
681 682 2.933492 GCGTTGTTGCCTAGTCACCATA 60.933 50.000 0.00 0.00 0.00 2.74
682 683 2.930040 CGTTGTTGCCTAGTCACCATAG 59.070 50.000 0.00 0.00 0.00 2.23
684 685 1.905894 TGTTGCCTAGTCACCATAGCA 59.094 47.619 0.00 0.00 0.00 3.49
799 815 0.032815 AAAATCCAAAACCCACGCCG 59.967 50.000 0.00 0.00 0.00 6.46
808 824 1.104630 AACCCACGCCGAAAGAAAAA 58.895 45.000 0.00 0.00 0.00 1.94
809 825 0.666374 ACCCACGCCGAAAGAAAAAG 59.334 50.000 0.00 0.00 0.00 2.27
810 826 0.039527 CCCACGCCGAAAGAAAAAGG 60.040 55.000 0.00 0.00 0.00 3.11
813 829 2.030274 CCACGCCGAAAGAAAAAGGAAT 60.030 45.455 0.00 0.00 0.00 3.01
835 851 2.825836 CAATGGGCGAGACAGGGC 60.826 66.667 0.00 0.00 0.00 5.19
836 852 3.329889 AATGGGCGAGACAGGGCA 61.330 61.111 0.00 0.00 0.00 5.36
837 853 3.628646 AATGGGCGAGACAGGGCAC 62.629 63.158 0.00 0.00 0.00 5.01
884 900 2.563179 CTCCCAGAGACGGAAAGAAAGA 59.437 50.000 0.00 0.00 0.00 2.52
885 901 2.969950 TCCCAGAGACGGAAAGAAAGAA 59.030 45.455 0.00 0.00 0.00 2.52
886 902 3.389983 TCCCAGAGACGGAAAGAAAGAAA 59.610 43.478 0.00 0.00 0.00 2.52
888 904 4.381411 CCAGAGACGGAAAGAAAGAAAGT 58.619 43.478 0.00 0.00 0.00 2.66
889 905 4.212214 CCAGAGACGGAAAGAAAGAAAGTG 59.788 45.833 0.00 0.00 0.00 3.16
891 907 3.477530 AGACGGAAAGAAAGAAAGTGGG 58.522 45.455 0.00 0.00 0.00 4.61
892 908 1.954382 ACGGAAAGAAAGAAAGTGGGC 59.046 47.619 0.00 0.00 0.00 5.36
1318 1345 2.695055 CGTGCCTGTAATGTCGCG 59.305 61.111 0.00 0.00 0.00 5.87
1396 1426 0.849094 TGGTTATCCTTGGGCTGGGT 60.849 55.000 0.00 0.00 34.23 4.51
1434 1464 3.279434 GGCTAGGGTTTCGTGATCATTT 58.721 45.455 0.00 0.00 0.00 2.32
1467 1497 1.009829 CTCGGCCTTGTTGATGTAGC 58.990 55.000 0.00 0.00 0.00 3.58
1492 1522 0.179137 TTCGTACGGATGCAGAGCAG 60.179 55.000 16.52 0.00 43.65 4.24
1499 1529 2.093500 ACGGATGCAGAGCAGATGTTTA 60.093 45.455 0.00 0.00 43.65 2.01
1500 1530 3.136763 CGGATGCAGAGCAGATGTTTAT 58.863 45.455 0.00 0.00 43.65 1.40
1505 1535 3.879295 TGCAGAGCAGATGTTTATTAGGC 59.121 43.478 0.00 0.00 33.32 3.93
1507 1537 4.024218 GCAGAGCAGATGTTTATTAGGCTG 60.024 45.833 0.00 0.00 0.00 4.85
1517 1547 9.125026 AGATGTTTATTAGGCTGTCATTTTAGG 57.875 33.333 0.00 0.00 0.00 2.69
1521 1551 8.914011 GTTTATTAGGCTGTCATTTTAGGGATT 58.086 33.333 0.00 0.00 0.00 3.01
1540 1570 5.127682 GGGATTGTGATTAGGCTGTCATTTT 59.872 40.000 0.00 0.00 0.00 1.82
1551 1581 5.809001 AGGCTGTCATTTTAGAGATTGTGA 58.191 37.500 0.00 0.00 0.00 3.58
1560 1590 8.049117 TCATTTTAGAGATTGTGATTAGGCTGT 58.951 33.333 0.00 0.00 0.00 4.40
1570 1600 8.757982 ATTGTGATTAGGCTGTCATTTTAGAT 57.242 30.769 0.00 0.00 0.00 1.98
1603 1633 4.946157 AGGCTGTCATTTTAGAGATTGTGG 59.054 41.667 0.00 0.00 0.00 4.17
1624 1654 3.628032 GGTTAGGCTGCCATTTTAGAGAC 59.372 47.826 22.65 5.31 0.00 3.36
1638 1668 5.899120 TTTAGAGACTGTGAGCGTAGATT 57.101 39.130 0.00 0.00 0.00 2.40
1639 1669 3.773860 AGAGACTGTGAGCGTAGATTG 57.226 47.619 0.00 0.00 0.00 2.67
1640 1670 3.085533 AGAGACTGTGAGCGTAGATTGT 58.914 45.455 0.00 0.00 0.00 2.71
1641 1671 3.119673 AGAGACTGTGAGCGTAGATTGTG 60.120 47.826 0.00 0.00 0.00 3.33
1642 1672 1.656095 GACTGTGAGCGTAGATTGTGC 59.344 52.381 0.00 0.00 0.00 4.57
1643 1673 1.273606 ACTGTGAGCGTAGATTGTGCT 59.726 47.619 0.00 0.00 42.73 4.40
1644 1674 1.657594 CTGTGAGCGTAGATTGTGCTG 59.342 52.381 0.00 0.00 39.49 4.41
1645 1675 1.000843 TGTGAGCGTAGATTGTGCTGT 59.999 47.619 0.00 0.00 39.49 4.40
1646 1676 2.069273 GTGAGCGTAGATTGTGCTGTT 58.931 47.619 0.00 0.00 39.49 3.16
1647 1677 3.250744 GTGAGCGTAGATTGTGCTGTTA 58.749 45.455 0.00 0.00 39.49 2.41
1648 1678 3.304559 GTGAGCGTAGATTGTGCTGTTAG 59.695 47.826 0.00 0.00 39.49 2.34
1649 1679 3.056821 TGAGCGTAGATTGTGCTGTTAGT 60.057 43.478 0.00 0.00 39.49 2.24
1674 1704 1.358877 TGATCATGAGTTCCGCGTTG 58.641 50.000 4.92 0.00 0.00 4.10
1710 1740 5.766150 AATGATGACTTGAACCAAACGAA 57.234 34.783 0.00 0.00 0.00 3.85
1792 1822 4.641396 TGTGAGGAAGAATGTGGTACAAG 58.359 43.478 0.00 0.00 44.16 3.16
1811 1841 7.280205 GGTACAAGTTCAGTTGGTCCTATATTG 59.720 40.741 0.00 0.00 0.00 1.90
1919 1951 1.098050 GTGGGAGCTTTGTGCCTATG 58.902 55.000 0.00 0.00 44.23 2.23
2158 2192 3.384168 AGTGTTGCCTATCCCTGTGATA 58.616 45.455 0.00 0.00 34.76 2.15
2173 2208 5.986135 CCCTGTGATATCTGTACTAACTTGC 59.014 44.000 3.98 0.00 0.00 4.01
2215 2250 8.333235 TCCCATTTAGTTTGAGGTTGTGTATAT 58.667 33.333 0.00 0.00 0.00 0.86
2230 2265 8.450964 GGTTGTGTATATTACATACCATGATGC 58.549 37.037 12.97 0.00 41.74 3.91
2233 2268 9.382275 TGTGTATATTACATACCATGATGCATC 57.618 33.333 20.14 20.14 41.34 3.91
2236 2271 2.189594 ACATACCATGATGCATCCCG 57.810 50.000 23.67 14.05 0.00 5.14
2262 2297 5.983118 GGACAATGTTTGACTTTTTGGTAGG 59.017 40.000 0.00 0.00 0.00 3.18
2391 2429 6.509418 TGCAAATTTTAGTACCTTAGCCAG 57.491 37.500 0.00 0.00 0.00 4.85
2397 2435 9.749340 AAATTTTAGTACCTTAGCCAGTATGTT 57.251 29.630 0.00 0.00 0.00 2.71
2398 2436 8.732746 ATTTTAGTACCTTAGCCAGTATGTTG 57.267 34.615 0.00 0.00 0.00 3.33
2775 2823 8.324306 ACCAGATGACTGAAAGAATGATAGAAA 58.676 33.333 0.00 0.00 46.03 2.52
2802 2850 6.603201 TGATTGAAAATAGCTCCTCCGAAATT 59.397 34.615 0.00 0.00 0.00 1.82
2803 2851 7.773224 TGATTGAAAATAGCTCCTCCGAAATTA 59.227 33.333 0.00 0.00 0.00 1.40
2807 2855 7.657761 TGAAAATAGCTCCTCCGAAATTATCTC 59.342 37.037 0.00 0.00 0.00 2.75
2863 2911 8.723942 ATAGACTGAAGTTCATGGAAATGTAC 57.276 34.615 5.91 0.00 0.00 2.90
2901 2949 0.264359 CAGGGGAGAGAGATGGAGGT 59.736 60.000 0.00 0.00 0.00 3.85
3028 3240 9.399403 GGCTTATTTAAACTCTCTTTGAACTTG 57.601 33.333 0.00 0.00 0.00 3.16
3029 3241 9.399403 GCTTATTTAAACTCTCTTTGAACTTGG 57.601 33.333 0.00 0.00 0.00 3.61
3292 3518 0.172127 TGCAGTCTGTGATCGAGAGC 59.828 55.000 0.93 0.00 0.00 4.09
3469 3695 7.701445 ACAGTCAAAAATCTCAGAAAGTTCAG 58.299 34.615 0.00 0.00 0.00 3.02
3690 3916 8.758715 CATGAAGAAATTGAAAACTCCAAAGAC 58.241 33.333 0.00 0.00 0.00 3.01
3692 3918 8.310382 TGAAGAAATTGAAAACTCCAAAGACAA 58.690 29.630 0.00 0.00 0.00 3.18
3707 3933 5.245531 CAAAGACAAAGCCTGGTGTATCTA 58.754 41.667 0.00 0.00 0.00 1.98
3784 4010 7.518188 AGGAACTGAAAACTCCAAAGATAGAA 58.482 34.615 0.00 0.00 37.18 2.10
3802 4028 2.972713 AGAACCTGGTGTATCTGTGTGT 59.027 45.455 0.00 0.00 0.00 3.72
4087 4313 3.135895 ACTTGCAGTTAGTTAGTGTGGGT 59.864 43.478 0.00 0.00 0.00 4.51
4160 4387 7.672983 TTTAAGTGGCTCAAATCTTCTGTAG 57.327 36.000 0.00 0.00 0.00 2.74
4329 4556 3.640967 AGATCAAGAGTGGTGCTATCTCC 59.359 47.826 0.00 0.00 0.00 3.71
4359 4586 4.033709 AGGAGCTCCTAAAAGACATGCTA 58.966 43.478 34.40 0.00 46.48 3.49
4383 4610 9.214957 CTAGTGTTTGTGAATAATGTCCTTACA 57.785 33.333 0.00 0.00 40.69 2.41
4537 4764 1.494721 TCAAGAAGACCAAGGCAAGGT 59.505 47.619 0.09 0.09 43.46 3.50
4572 4799 4.252073 CTGTAATCAAGAAGACTGCTGCT 58.748 43.478 0.00 0.00 0.00 4.24
4573 4800 3.999001 TGTAATCAAGAAGACTGCTGCTG 59.001 43.478 4.89 4.89 27.48 4.41
4574 4801 1.451067 ATCAAGAAGACTGCTGCTGC 58.549 50.000 8.89 8.89 40.20 5.25
4583 4810 4.213666 TGCTGCTGCAGTGATAGC 57.786 55.556 28.50 18.84 45.31 2.97
4584 4811 1.600638 TGCTGCTGCAGTGATAGCT 59.399 52.632 28.50 0.00 45.31 3.32
4585 4812 0.743345 TGCTGCTGCAGTGATAGCTG 60.743 55.000 28.50 17.07 45.31 4.24
4613 4855 5.044846 AGCCTGTATTAAAGAAGACCATGGT 60.045 40.000 19.89 19.89 0.00 3.55
4723 4965 2.093447 AGTGAGGCCGTAATCAAGAAGG 60.093 50.000 0.00 0.00 0.00 3.46
4730 4972 1.017387 GTAATCAAGAAGGCCGCTGG 58.983 55.000 0.00 0.00 0.00 4.85
4767 5009 2.032634 CGTAAGCAAGAAGGCGGCA 61.033 57.895 13.08 0.00 39.27 5.69
4817 5059 5.106396 CCAAGAAGATTTCTCGAACATTGCT 60.106 40.000 0.00 0.00 39.61 3.91
4821 5063 1.896220 TTTCTCGAACATTGCTGCCT 58.104 45.000 0.00 0.00 0.00 4.75
4884 5126 0.322008 CAAGGGAGACTGGAAGCACC 60.322 60.000 0.00 0.00 37.60 5.01
4956 5198 3.567478 ACAGCTGAGGAAGAAACTGTT 57.433 42.857 23.35 0.00 34.89 3.16
5082 5324 0.536687 AGAGGAGTCGACGGTGACAA 60.537 55.000 10.46 0.00 41.41 3.18
5433 5675 8.188139 TCTGTAAGAGTCATTTGTTTTTGGTTC 58.812 33.333 0.00 0.00 38.67 3.62
5464 5706 5.221722 TGGAGCAAGATTGTCAAGAGTAGTT 60.222 40.000 0.00 0.00 0.00 2.24
5465 5707 5.121454 GGAGCAAGATTGTCAAGAGTAGTTG 59.879 44.000 0.00 0.00 0.00 3.16
5552 5913 8.399425 TCAAGACTCGAGAGTAGTATTGAAATC 58.601 37.037 21.68 0.22 46.52 2.17
5846 6212 1.446272 CCTTCCTCTGAACGTCGCC 60.446 63.158 0.00 0.00 0.00 5.54
5847 6213 1.446272 CTTCCTCTGAACGTCGCCC 60.446 63.158 0.00 0.00 0.00 6.13
5848 6214 3.277211 TTCCTCTGAACGTCGCCCG 62.277 63.158 0.00 0.00 44.03 6.13
5924 6294 2.168521 CGTGCCTTTCCCAATCTCTCTA 59.831 50.000 0.00 0.00 0.00 2.43
5934 6304 4.718774 TCCCAATCTCTCTACAGAGCATTT 59.281 41.667 1.12 0.00 45.46 2.32
5935 6305 5.055812 CCCAATCTCTCTACAGAGCATTTC 58.944 45.833 1.12 0.00 45.46 2.17
5936 6306 5.055812 CCAATCTCTCTACAGAGCATTTCC 58.944 45.833 1.12 0.00 45.46 3.13
5943 6313 0.915364 ACAGAGCATTTCCTCCTCCC 59.085 55.000 0.00 0.00 32.17 4.30
6049 6420 2.838225 CCTCCGCGGTATGTCCCT 60.838 66.667 27.15 0.00 0.00 4.20
6059 6430 3.292460 CGGTATGTCCCTTCTCTTCTCT 58.708 50.000 0.00 0.00 0.00 3.10
6067 6438 2.416701 CCCTTCTCTTCTCTTCGTGCTC 60.417 54.545 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.059584 TGGCAAGAGGGACAAGTGGA 61.060 55.000 0.00 0.00 0.00 4.02
1 2 0.178992 TTGGCAAGAGGGACAAGTGG 60.179 55.000 0.00 0.00 30.72 4.00
2 3 1.542915 CATTGGCAAGAGGGACAAGTG 59.457 52.381 5.96 0.00 39.60 3.16
3 4 1.915141 CATTGGCAAGAGGGACAAGT 58.085 50.000 5.96 0.00 39.60 3.16
4 5 0.529378 GCATTGGCAAGAGGGACAAG 59.471 55.000 5.96 0.00 39.60 3.16
5 6 0.899717 GGCATTGGCAAGAGGGACAA 60.900 55.000 5.96 0.00 43.71 3.18
6 7 1.304381 GGCATTGGCAAGAGGGACA 60.304 57.895 5.96 0.00 43.71 4.02
7 8 2.054453 GGGCATTGGCAAGAGGGAC 61.054 63.158 12.70 0.00 43.71 4.46
8 9 2.240918 AGGGCATTGGCAAGAGGGA 61.241 57.895 12.70 0.00 43.71 4.20
9 10 2.056223 CAGGGCATTGGCAAGAGGG 61.056 63.158 12.70 0.00 43.71 4.30
10 11 2.718073 GCAGGGCATTGGCAAGAGG 61.718 63.158 12.70 0.00 43.71 3.69
11 12 1.681327 AGCAGGGCATTGGCAAGAG 60.681 57.895 12.70 1.82 43.71 2.85
12 13 1.980232 CAGCAGGGCATTGGCAAGA 60.980 57.895 12.70 0.00 43.71 3.02
13 14 0.966875 TACAGCAGGGCATTGGCAAG 60.967 55.000 12.70 4.77 43.71 4.01
14 15 0.541530 TTACAGCAGGGCATTGGCAA 60.542 50.000 12.70 0.68 43.71 4.52
15 16 0.541530 TTTACAGCAGGGCATTGGCA 60.542 50.000 12.70 0.00 43.71 4.92
16 17 0.174162 CTTTACAGCAGGGCATTGGC 59.826 55.000 0.70 0.70 40.13 4.52
17 18 1.474077 GTCTTTACAGCAGGGCATTGG 59.526 52.381 0.00 0.00 0.00 3.16
18 19 2.161855 TGTCTTTACAGCAGGGCATTG 58.838 47.619 0.00 0.00 0.00 2.82
19 20 2.584835 TGTCTTTACAGCAGGGCATT 57.415 45.000 0.00 0.00 0.00 3.56
20 21 2.584835 TTGTCTTTACAGCAGGGCAT 57.415 45.000 0.00 0.00 36.83 4.40
21 22 2.229792 CTTTGTCTTTACAGCAGGGCA 58.770 47.619 0.00 0.00 36.83 5.36
22 23 1.068264 GCTTTGTCTTTACAGCAGGGC 60.068 52.381 0.00 0.00 36.83 5.19
23 24 1.541588 GGCTTTGTCTTTACAGCAGGG 59.458 52.381 0.00 0.00 36.83 4.45
24 25 1.541588 GGGCTTTGTCTTTACAGCAGG 59.458 52.381 0.00 0.00 36.83 4.85
25 26 2.485814 GAGGGCTTTGTCTTTACAGCAG 59.514 50.000 0.00 0.00 36.83 4.24
26 27 2.158682 TGAGGGCTTTGTCTTTACAGCA 60.159 45.455 0.00 0.00 36.83 4.41
27 28 2.504367 TGAGGGCTTTGTCTTTACAGC 58.496 47.619 0.00 0.00 36.83 4.40
28 29 4.389374 TCTTGAGGGCTTTGTCTTTACAG 58.611 43.478 0.00 0.00 36.83 2.74
29 30 4.389374 CTCTTGAGGGCTTTGTCTTTACA 58.611 43.478 0.00 0.00 0.00 2.41
30 31 3.753797 CCTCTTGAGGGCTTTGTCTTTAC 59.246 47.826 8.74 0.00 0.00 2.01
31 32 3.244911 CCCTCTTGAGGGCTTTGTCTTTA 60.245 47.826 21.32 0.00 42.99 1.85
32 33 2.489802 CCCTCTTGAGGGCTTTGTCTTT 60.490 50.000 21.32 0.00 42.99 2.52
33 34 1.074566 CCCTCTTGAGGGCTTTGTCTT 59.925 52.381 21.32 0.00 42.99 3.01
34 35 0.695347 CCCTCTTGAGGGCTTTGTCT 59.305 55.000 21.32 0.00 42.99 3.41
35 36 3.256281 CCCTCTTGAGGGCTTTGTC 57.744 57.895 21.32 0.00 42.99 3.18
43 44 0.669077 CGTCGTATCCCCTCTTGAGG 59.331 60.000 9.60 9.60 0.00 3.86
44 45 0.030908 GCGTCGTATCCCCTCTTGAG 59.969 60.000 0.00 0.00 0.00 3.02
45 46 1.389609 GGCGTCGTATCCCCTCTTGA 61.390 60.000 0.00 0.00 0.00 3.02
46 47 1.067582 GGCGTCGTATCCCCTCTTG 59.932 63.158 0.00 0.00 0.00 3.02
47 48 0.974010 TTGGCGTCGTATCCCCTCTT 60.974 55.000 0.00 0.00 0.00 2.85
48 49 1.380785 TTGGCGTCGTATCCCCTCT 60.381 57.895 0.00 0.00 0.00 3.69
49 50 1.067582 CTTGGCGTCGTATCCCCTC 59.932 63.158 0.00 0.00 0.00 4.30
50 51 2.432300 CCTTGGCGTCGTATCCCCT 61.432 63.158 0.00 0.00 0.00 4.79
51 52 2.108362 CCTTGGCGTCGTATCCCC 59.892 66.667 0.00 0.00 0.00 4.81
52 53 2.588034 GCCTTGGCGTCGTATCCC 60.588 66.667 0.00 0.00 0.00 3.85
53 54 2.171725 GTGCCTTGGCGTCGTATCC 61.172 63.158 7.18 0.00 0.00 2.59
54 55 2.171725 GGTGCCTTGGCGTCGTATC 61.172 63.158 7.18 0.00 0.00 2.24
55 56 2.125269 GGTGCCTTGGCGTCGTAT 60.125 61.111 7.18 0.00 0.00 3.06
56 57 4.728102 CGGTGCCTTGGCGTCGTA 62.728 66.667 14.82 0.00 0.00 3.43
84 85 0.674534 GAACCCTAGATCCGCGTGAT 59.325 55.000 4.92 7.64 36.01 3.06
85 86 1.389609 GGAACCCTAGATCCGCGTGA 61.390 60.000 4.92 1.95 0.00 4.35
86 87 1.067582 GGAACCCTAGATCCGCGTG 59.932 63.158 4.92 0.00 0.00 5.34
87 88 3.534941 GGAACCCTAGATCCGCGT 58.465 61.111 4.92 0.00 0.00 6.01
104 105 1.751927 GTCAATGCAGCTCTGGGGG 60.752 63.158 0.00 0.00 0.00 5.40
105 106 1.751927 GGTCAATGCAGCTCTGGGG 60.752 63.158 0.00 0.00 0.00 4.96
106 107 2.110967 CGGTCAATGCAGCTCTGGG 61.111 63.158 0.00 0.00 0.00 4.45
107 108 1.078918 TCGGTCAATGCAGCTCTGG 60.079 57.895 0.00 0.00 0.00 3.86
108 109 1.364626 GGTCGGTCAATGCAGCTCTG 61.365 60.000 0.00 0.00 0.00 3.35
109 110 1.078848 GGTCGGTCAATGCAGCTCT 60.079 57.895 0.00 0.00 0.00 4.09
110 111 0.175760 TAGGTCGGTCAATGCAGCTC 59.824 55.000 0.00 0.00 0.00 4.09
111 112 0.833287 ATAGGTCGGTCAATGCAGCT 59.167 50.000 0.00 0.00 0.00 4.24
112 113 0.940126 CATAGGTCGGTCAATGCAGC 59.060 55.000 0.00 0.00 0.00 5.25
113 114 0.940126 GCATAGGTCGGTCAATGCAG 59.060 55.000 0.00 0.00 43.30 4.41
114 115 0.463654 GGCATAGGTCGGTCAATGCA 60.464 55.000 13.16 0.00 45.13 3.96
115 116 1.166531 GGGCATAGGTCGGTCAATGC 61.167 60.000 0.00 0.00 43.13 3.56
116 117 0.880278 CGGGCATAGGTCGGTCAATG 60.880 60.000 0.00 0.00 0.00 2.82
117 118 1.046472 TCGGGCATAGGTCGGTCAAT 61.046 55.000 0.00 0.00 0.00 2.57
118 119 1.672854 CTCGGGCATAGGTCGGTCAA 61.673 60.000 0.00 0.00 0.00 3.18
119 120 2.043752 TCGGGCATAGGTCGGTCA 60.044 61.111 0.00 0.00 0.00 4.02
120 121 2.728817 CTCGGGCATAGGTCGGTC 59.271 66.667 0.00 0.00 0.00 4.79
121 122 2.838225 CCTCGGGCATAGGTCGGT 60.838 66.667 0.00 0.00 0.00 4.69
122 123 3.616721 CCCTCGGGCATAGGTCGG 61.617 72.222 3.96 0.00 31.70 4.79
123 124 3.616721 CCCCTCGGGCATAGGTCG 61.617 72.222 0.00 0.00 35.35 4.79
134 135 3.628646 CTTGCTTCCCCACCCCTCG 62.629 68.421 0.00 0.00 0.00 4.63
135 136 2.231380 TCTTGCTTCCCCACCCCTC 61.231 63.158 0.00 0.00 0.00 4.30
136 137 2.121506 TCTTGCTTCCCCACCCCT 60.122 61.111 0.00 0.00 0.00 4.79
137 138 2.035783 GTCTTGCTTCCCCACCCC 59.964 66.667 0.00 0.00 0.00 4.95
138 139 1.152830 TTGTCTTGCTTCCCCACCC 59.847 57.895 0.00 0.00 0.00 4.61
139 140 1.515521 CGTTGTCTTGCTTCCCCACC 61.516 60.000 0.00 0.00 0.00 4.61
140 141 0.534203 TCGTTGTCTTGCTTCCCCAC 60.534 55.000 0.00 0.00 0.00 4.61
141 142 0.400213 ATCGTTGTCTTGCTTCCCCA 59.600 50.000 0.00 0.00 0.00 4.96
142 143 0.804989 CATCGTTGTCTTGCTTCCCC 59.195 55.000 0.00 0.00 0.00 4.81
143 144 0.169009 GCATCGTTGTCTTGCTTCCC 59.831 55.000 0.00 0.00 33.61 3.97
144 145 0.169009 GGCATCGTTGTCTTGCTTCC 59.831 55.000 0.00 0.00 36.62 3.46
145 146 1.160137 AGGCATCGTTGTCTTGCTTC 58.840 50.000 0.00 0.00 32.61 3.86
146 147 1.609208 AAGGCATCGTTGTCTTGCTT 58.391 45.000 12.35 0.00 45.89 3.91
147 148 3.329300 AAGGCATCGTTGTCTTGCT 57.671 47.368 12.35 0.00 45.89 3.91
151 152 2.154462 CCTTTGAAGGCATCGTTGTCT 58.846 47.619 0.00 0.00 40.30 3.41
152 153 2.619013 CCTTTGAAGGCATCGTTGTC 57.381 50.000 0.00 0.00 39.76 3.18
163 164 1.537202 CTTGGTCTTCGGCCTTTGAAG 59.463 52.381 11.50 11.50 43.31 3.02
164 165 1.142060 TCTTGGTCTTCGGCCTTTGAA 59.858 47.619 0.00 0.00 0.00 2.69
165 166 0.762418 TCTTGGTCTTCGGCCTTTGA 59.238 50.000 0.00 0.00 0.00 2.69
166 167 0.875059 GTCTTGGTCTTCGGCCTTTG 59.125 55.000 0.00 0.00 0.00 2.77
167 168 0.472471 TGTCTTGGTCTTCGGCCTTT 59.528 50.000 0.00 0.00 0.00 3.11
168 169 0.693049 ATGTCTTGGTCTTCGGCCTT 59.307 50.000 0.00 0.00 0.00 4.35
169 170 0.036010 CATGTCTTGGTCTTCGGCCT 60.036 55.000 0.00 0.00 0.00 5.19
170 171 1.026718 CCATGTCTTGGTCTTCGGCC 61.027 60.000 0.00 0.00 40.99 6.13
171 172 2.471255 CCATGTCTTGGTCTTCGGC 58.529 57.895 0.00 0.00 40.99 5.54
180 181 2.226330 TCCGGTGAAAACCATGTCTTG 58.774 47.619 0.00 0.00 0.00 3.02
181 182 2.105821 TCTCCGGTGAAAACCATGTCTT 59.894 45.455 3.14 0.00 0.00 3.01
182 183 1.697432 TCTCCGGTGAAAACCATGTCT 59.303 47.619 3.14 0.00 0.00 3.41
183 184 2.178912 TCTCCGGTGAAAACCATGTC 57.821 50.000 3.14 0.00 0.00 3.06
184 185 2.879103 ATCTCCGGTGAAAACCATGT 57.121 45.000 10.77 0.00 0.00 3.21
185 186 2.423538 GGAATCTCCGGTGAAAACCATG 59.576 50.000 10.77 0.00 0.00 3.66
186 187 2.723273 GGAATCTCCGGTGAAAACCAT 58.277 47.619 10.77 0.00 0.00 3.55
187 188 2.194201 GGAATCTCCGGTGAAAACCA 57.806 50.000 10.77 0.00 0.00 3.67
198 199 0.613777 AGGTGGTGTTCGGAATCTCC 59.386 55.000 0.00 0.00 0.00 3.71
199 200 1.275291 TGAGGTGGTGTTCGGAATCTC 59.725 52.381 0.00 0.00 0.00 2.75
200 201 1.348064 TGAGGTGGTGTTCGGAATCT 58.652 50.000 0.00 0.00 0.00 2.40
201 202 2.178912 TTGAGGTGGTGTTCGGAATC 57.821 50.000 0.00 0.00 0.00 2.52
202 203 2.039746 TCATTGAGGTGGTGTTCGGAAT 59.960 45.455 0.00 0.00 0.00 3.01
203 204 1.418264 TCATTGAGGTGGTGTTCGGAA 59.582 47.619 0.00 0.00 0.00 4.30
204 205 1.052617 TCATTGAGGTGGTGTTCGGA 58.947 50.000 0.00 0.00 0.00 4.55
205 206 1.156736 GTCATTGAGGTGGTGTTCGG 58.843 55.000 0.00 0.00 0.00 4.30
206 207 1.156736 GGTCATTGAGGTGGTGTTCG 58.843 55.000 0.00 0.00 0.00 3.95
207 208 1.202879 TGGGTCATTGAGGTGGTGTTC 60.203 52.381 0.00 0.00 0.00 3.18
208 209 0.850100 TGGGTCATTGAGGTGGTGTT 59.150 50.000 0.00 0.00 0.00 3.32
209 210 0.110486 GTGGGTCATTGAGGTGGTGT 59.890 55.000 0.00 0.00 0.00 4.16
210 211 0.110295 TGTGGGTCATTGAGGTGGTG 59.890 55.000 0.00 0.00 0.00 4.17
211 212 0.110486 GTGTGGGTCATTGAGGTGGT 59.890 55.000 0.00 0.00 0.00 4.16
212 213 0.110295 TGTGTGGGTCATTGAGGTGG 59.890 55.000 0.00 0.00 0.00 4.61
213 214 1.527034 CTGTGTGGGTCATTGAGGTG 58.473 55.000 0.00 0.00 0.00 4.00
214 215 0.401738 CCTGTGTGGGTCATTGAGGT 59.598 55.000 0.00 0.00 0.00 3.85
215 216 0.401738 ACCTGTGTGGGTCATTGAGG 59.598 55.000 0.00 0.00 41.11 3.86
216 217 1.527034 CACCTGTGTGGGTCATTGAG 58.473 55.000 0.00 0.00 41.11 3.02
217 218 3.723772 CACCTGTGTGGGTCATTGA 57.276 52.632 0.00 0.00 41.11 2.57
226 227 2.949790 GGTCTTGCCAACACCTGTGTG 61.950 57.143 3.28 0.00 44.13 3.82
227 228 3.415137 TGGTCTTGCCAACACCTGTGT 62.415 52.381 3.48 0.00 45.94 3.72
228 229 0.751277 TGGTCTTGCCAACACCTGTG 60.751 55.000 3.48 0.00 45.94 3.66
229 230 1.612513 TGGTCTTGCCAACACCTGT 59.387 52.632 3.48 0.00 45.94 4.00
230 231 4.577152 TGGTCTTGCCAACACCTG 57.423 55.556 3.48 0.00 45.94 4.00
237 238 0.324738 TTGGTTTGGTGGTCTTGCCA 60.325 50.000 0.00 0.00 46.95 4.92
238 239 0.389025 CTTGGTTTGGTGGTCTTGCC 59.611 55.000 0.00 0.00 37.90 4.52
239 240 0.389025 CCTTGGTTTGGTGGTCTTGC 59.611 55.000 0.00 0.00 0.00 4.01
240 241 1.681264 GTCCTTGGTTTGGTGGTCTTG 59.319 52.381 0.00 0.00 0.00 3.02
241 242 1.286553 TGTCCTTGGTTTGGTGGTCTT 59.713 47.619 0.00 0.00 0.00 3.01
242 243 0.923358 TGTCCTTGGTTTGGTGGTCT 59.077 50.000 0.00 0.00 0.00 3.85
243 244 1.407618 GTTGTCCTTGGTTTGGTGGTC 59.592 52.381 0.00 0.00 0.00 4.02
244 245 1.480789 GTTGTCCTTGGTTTGGTGGT 58.519 50.000 0.00 0.00 0.00 4.16
245 246 0.750249 GGTTGTCCTTGGTTTGGTGG 59.250 55.000 0.00 0.00 0.00 4.61
246 247 0.750249 GGGTTGTCCTTGGTTTGGTG 59.250 55.000 0.00 0.00 0.00 4.17
247 248 0.753848 CGGGTTGTCCTTGGTTTGGT 60.754 55.000 0.00 0.00 0.00 3.67
248 249 0.753848 ACGGGTTGTCCTTGGTTTGG 60.754 55.000 0.00 0.00 0.00 3.28
249 250 0.666374 GACGGGTTGTCCTTGGTTTG 59.334 55.000 0.00 0.00 42.04 2.93
250 251 0.816421 CGACGGGTTGTCCTTGGTTT 60.816 55.000 0.00 0.00 45.23 3.27
251 252 1.227734 CGACGGGTTGTCCTTGGTT 60.228 57.895 0.00 0.00 45.23 3.67
252 253 2.135581 TCGACGGGTTGTCCTTGGT 61.136 57.895 0.00 0.00 45.23 3.67
253 254 1.666872 GTCGACGGGTTGTCCTTGG 60.667 63.158 0.00 0.00 45.23 3.61
254 255 2.019951 CGTCGACGGGTTGTCCTTG 61.020 63.158 29.70 0.00 45.23 3.61
255 256 1.737355 TTCGTCGACGGGTTGTCCTT 61.737 55.000 35.05 0.00 45.23 3.36
256 257 2.138656 CTTCGTCGACGGGTTGTCCT 62.139 60.000 35.05 0.00 45.23 3.85
257 258 1.731969 CTTCGTCGACGGGTTGTCC 60.732 63.158 35.05 0.00 45.23 4.02
258 259 0.728466 CTCTTCGTCGACGGGTTGTC 60.728 60.000 35.05 0.00 44.53 3.18
259 260 1.168407 TCTCTTCGTCGACGGGTTGT 61.168 55.000 35.05 0.00 40.29 3.32
260 261 0.728466 GTCTCTTCGTCGACGGGTTG 60.728 60.000 35.05 22.58 40.29 3.77
261 262 1.168407 TGTCTCTTCGTCGACGGGTT 61.168 55.000 35.05 0.00 40.29 4.11
262 263 1.598962 TGTCTCTTCGTCGACGGGT 60.599 57.895 35.05 0.00 40.29 5.28
263 264 1.154263 GTGTCTCTTCGTCGACGGG 60.154 63.158 35.05 26.65 40.29 5.28
264 265 0.040692 TTGTGTCTCTTCGTCGACGG 60.041 55.000 35.05 21.47 40.29 4.79
265 266 1.709203 CTTTGTGTCTCTTCGTCGACG 59.291 52.381 31.30 31.30 41.45 5.12
266 267 2.728922 ACTTTGTGTCTCTTCGTCGAC 58.271 47.619 5.18 5.18 0.00 4.20
267 268 3.608707 GCTACTTTGTGTCTCTTCGTCGA 60.609 47.826 0.00 0.00 0.00 4.20
268 269 2.657372 GCTACTTTGTGTCTCTTCGTCG 59.343 50.000 0.00 0.00 0.00 5.12
269 270 2.987821 GGCTACTTTGTGTCTCTTCGTC 59.012 50.000 0.00 0.00 0.00 4.20
270 271 2.607282 CGGCTACTTTGTGTCTCTTCGT 60.607 50.000 0.00 0.00 0.00 3.85
271 272 1.986378 CGGCTACTTTGTGTCTCTTCG 59.014 52.381 0.00 0.00 0.00 3.79
272 273 2.338500 CCGGCTACTTTGTGTCTCTTC 58.662 52.381 0.00 0.00 0.00 2.87
273 274 1.608283 GCCGGCTACTTTGTGTCTCTT 60.608 52.381 22.15 0.00 0.00 2.85
274 275 0.037232 GCCGGCTACTTTGTGTCTCT 60.037 55.000 22.15 0.00 0.00 3.10
275 276 1.019805 GGCCGGCTACTTTGTGTCTC 61.020 60.000 28.56 0.00 0.00 3.36
276 277 1.003718 GGCCGGCTACTTTGTGTCT 60.004 57.895 28.56 0.00 0.00 3.41
277 278 2.388232 CGGCCGGCTACTTTGTGTC 61.388 63.158 28.56 3.90 0.00 3.67
278 279 2.358247 CGGCCGGCTACTTTGTGT 60.358 61.111 28.56 0.00 0.00 3.72
279 280 3.799755 GCGGCCGGCTACTTTGTG 61.800 66.667 29.38 7.21 39.11 3.33
280 281 4.323477 TGCGGCCGGCTACTTTGT 62.323 61.111 29.38 0.00 44.05 2.83
281 282 3.799755 GTGCGGCCGGCTACTTTG 61.800 66.667 29.38 10.47 44.05 2.77
291 292 2.049063 CTAGCTATCGGTGCGGCC 60.049 66.667 0.00 0.00 35.28 6.13
292 293 2.049063 CCTAGCTATCGGTGCGGC 60.049 66.667 0.00 0.00 35.28 6.53
293 294 0.889638 TCTCCTAGCTATCGGTGCGG 60.890 60.000 0.00 0.00 35.28 5.69
294 295 0.238817 GTCTCCTAGCTATCGGTGCG 59.761 60.000 0.00 0.00 35.28 5.34
295 296 0.599060 GGTCTCCTAGCTATCGGTGC 59.401 60.000 0.00 0.00 0.00 5.01
296 297 2.279935 AGGTCTCCTAGCTATCGGTG 57.720 55.000 0.00 0.00 32.98 4.94
297 298 3.706600 CTAGGTCTCCTAGCTATCGGT 57.293 52.381 9.47 0.00 45.64 4.69
306 307 3.157881 CATCGATTGCCTAGGTCTCCTA 58.842 50.000 11.31 0.00 34.61 2.94
307 308 1.967066 CATCGATTGCCTAGGTCTCCT 59.033 52.381 11.31 0.00 37.71 3.69
308 309 1.964223 TCATCGATTGCCTAGGTCTCC 59.036 52.381 11.31 0.00 0.00 3.71
309 310 2.605823 CGTCATCGATTGCCTAGGTCTC 60.606 54.545 11.31 4.09 39.71 3.36
310 311 1.338337 CGTCATCGATTGCCTAGGTCT 59.662 52.381 11.31 0.00 39.71 3.85
311 312 1.337071 TCGTCATCGATTGCCTAGGTC 59.663 52.381 11.31 3.32 41.35 3.85
312 313 1.338337 CTCGTCATCGATTGCCTAGGT 59.662 52.381 11.31 0.00 45.21 3.08
313 314 1.338337 ACTCGTCATCGATTGCCTAGG 59.662 52.381 3.67 3.67 45.21 3.02
314 315 2.783828 ACTCGTCATCGATTGCCTAG 57.216 50.000 0.00 0.00 45.21 3.02
315 316 3.520290 AAACTCGTCATCGATTGCCTA 57.480 42.857 0.00 0.00 45.21 3.93
316 317 2.386661 AAACTCGTCATCGATTGCCT 57.613 45.000 0.00 0.00 45.21 4.75
317 318 2.774007 CAAAACTCGTCATCGATTGCC 58.226 47.619 0.00 0.00 45.21 4.52
318 319 2.169179 GCAAAACTCGTCATCGATTGC 58.831 47.619 0.00 10.14 45.37 3.56
319 320 2.159841 ACGCAAAACTCGTCATCGATTG 60.160 45.455 0.00 0.00 45.21 2.67
320 321 2.066262 ACGCAAAACTCGTCATCGATT 58.934 42.857 0.00 0.00 45.21 3.34
321 322 1.390123 CACGCAAAACTCGTCATCGAT 59.610 47.619 0.00 0.00 45.21 3.59
322 323 0.781787 CACGCAAAACTCGTCATCGA 59.218 50.000 0.00 0.00 44.12 3.59
323 324 0.179250 CCACGCAAAACTCGTCATCG 60.179 55.000 0.00 0.00 38.19 3.84
324 325 1.136336 GTCCACGCAAAACTCGTCATC 60.136 52.381 0.00 0.00 38.19 2.92
325 326 0.865769 GTCCACGCAAAACTCGTCAT 59.134 50.000 0.00 0.00 38.19 3.06
326 327 0.179094 AGTCCACGCAAAACTCGTCA 60.179 50.000 0.00 0.00 38.19 4.35
327 328 0.935196 AAGTCCACGCAAAACTCGTC 59.065 50.000 0.00 0.00 38.19 4.20
328 329 0.935196 GAAGTCCACGCAAAACTCGT 59.065 50.000 0.00 0.00 41.28 4.18
329 330 0.111266 CGAAGTCCACGCAAAACTCG 60.111 55.000 0.00 0.00 0.00 4.18
330 331 0.234884 CCGAAGTCCACGCAAAACTC 59.765 55.000 0.00 0.00 0.00 3.01
331 332 1.782028 GCCGAAGTCCACGCAAAACT 61.782 55.000 0.00 0.00 0.00 2.66
332 333 1.370051 GCCGAAGTCCACGCAAAAC 60.370 57.895 0.00 0.00 0.00 2.43
333 334 0.249953 TAGCCGAAGTCCACGCAAAA 60.250 50.000 0.00 0.00 0.00 2.44
334 335 0.036765 ATAGCCGAAGTCCACGCAAA 60.037 50.000 0.00 0.00 0.00 3.68
335 336 0.459585 GATAGCCGAAGTCCACGCAA 60.460 55.000 0.00 0.00 0.00 4.85
336 337 1.141019 GATAGCCGAAGTCCACGCA 59.859 57.895 0.00 0.00 0.00 5.24
337 338 1.944676 CGATAGCCGAAGTCCACGC 60.945 63.158 0.00 0.00 41.76 5.34
338 339 4.303853 CGATAGCCGAAGTCCACG 57.696 61.111 0.00 0.00 41.76 4.94
350 351 2.354773 GTCCTTCGGCGGCGATAG 60.355 66.667 35.04 29.13 0.00 2.08
351 352 2.495409 ATGTCCTTCGGCGGCGATA 61.495 57.895 35.04 22.69 0.00 2.92
352 353 3.849951 ATGTCCTTCGGCGGCGAT 61.850 61.111 35.04 16.39 0.00 4.58
353 354 4.812476 CATGTCCTTCGGCGGCGA 62.812 66.667 31.46 31.46 0.00 5.54
355 356 3.379865 TACCATGTCCTTCGGCGGC 62.380 63.158 7.21 0.00 0.00 6.53
356 357 1.227263 CTACCATGTCCTTCGGCGG 60.227 63.158 7.21 0.00 0.00 6.13
357 358 0.527817 GTCTACCATGTCCTTCGGCG 60.528 60.000 0.00 0.00 0.00 6.46
358 359 0.179081 GGTCTACCATGTCCTTCGGC 60.179 60.000 0.00 0.00 35.64 5.54
359 360 1.486211 AGGTCTACCATGTCCTTCGG 58.514 55.000 1.26 0.00 38.89 4.30
360 361 3.068307 CCTAAGGTCTACCATGTCCTTCG 59.932 52.174 1.26 0.00 40.26 3.79
361 362 4.287552 TCCTAAGGTCTACCATGTCCTTC 58.712 47.826 1.26 0.00 40.26 3.46
362 363 4.348020 TCCTAAGGTCTACCATGTCCTT 57.652 45.455 1.26 0.00 42.10 3.36
363 364 4.561254 ATCCTAAGGTCTACCATGTCCT 57.439 45.455 1.26 0.00 38.89 3.85
364 365 5.011840 GGTTATCCTAAGGTCTACCATGTCC 59.988 48.000 1.26 0.00 38.89 4.02
365 366 5.011840 GGGTTATCCTAAGGTCTACCATGTC 59.988 48.000 1.26 0.00 38.89 3.06
366 367 4.906060 GGGTTATCCTAAGGTCTACCATGT 59.094 45.833 1.26 0.00 38.89 3.21
367 368 5.155905 AGGGTTATCCTAAGGTCTACCATG 58.844 45.833 1.26 0.00 45.98 3.66
368 369 5.435545 AGGGTTATCCTAAGGTCTACCAT 57.564 43.478 1.26 0.00 45.98 3.55
369 370 4.913154 AGGGTTATCCTAAGGTCTACCA 57.087 45.455 1.26 0.00 45.98 3.25
379 380 3.979501 ACGTCCCTTAGGGTTATCCTA 57.020 47.619 18.01 0.00 45.98 2.94
381 382 3.570540 ACTACGTCCCTTAGGGTTATCC 58.429 50.000 18.01 0.86 44.74 2.59
382 383 4.892345 AGAACTACGTCCCTTAGGGTTATC 59.108 45.833 18.01 7.40 44.74 1.75
383 384 4.648307 CAGAACTACGTCCCTTAGGGTTAT 59.352 45.833 18.01 6.21 44.74 1.89
384 385 4.019174 CAGAACTACGTCCCTTAGGGTTA 58.981 47.826 18.01 6.54 44.74 2.85
385 386 2.830321 CAGAACTACGTCCCTTAGGGTT 59.170 50.000 18.01 2.42 44.74 4.11
386 387 2.225217 ACAGAACTACGTCCCTTAGGGT 60.225 50.000 18.01 0.00 44.74 4.34
387 388 2.165845 CACAGAACTACGTCCCTTAGGG 59.834 54.545 11.94 11.94 46.11 3.53
388 389 2.824341 ACACAGAACTACGTCCCTTAGG 59.176 50.000 0.00 0.00 0.00 2.69
389 390 4.022589 TCAACACAGAACTACGTCCCTTAG 60.023 45.833 0.00 0.00 0.00 2.18
390 391 3.890756 TCAACACAGAACTACGTCCCTTA 59.109 43.478 0.00 0.00 0.00 2.69
391 392 2.696707 TCAACACAGAACTACGTCCCTT 59.303 45.455 0.00 0.00 0.00 3.95
392 393 2.296471 CTCAACACAGAACTACGTCCCT 59.704 50.000 0.00 0.00 0.00 4.20
393 394 2.673833 CTCAACACAGAACTACGTCCC 58.326 52.381 0.00 0.00 0.00 4.46
394 395 2.059541 GCTCAACACAGAACTACGTCC 58.940 52.381 0.00 0.00 0.00 4.79
395 396 2.059541 GGCTCAACACAGAACTACGTC 58.940 52.381 0.00 0.00 0.00 4.34
396 397 1.411246 TGGCTCAACACAGAACTACGT 59.589 47.619 0.00 0.00 0.00 3.57
397 398 1.792949 GTGGCTCAACACAGAACTACG 59.207 52.381 0.00 0.00 40.99 3.51
398 399 2.833794 TGTGGCTCAACACAGAACTAC 58.166 47.619 0.00 0.00 45.70 2.73
406 407 1.400494 ACTTTTCGTGTGGCTCAACAC 59.600 47.619 7.52 7.52 45.70 3.32
407 408 1.745232 ACTTTTCGTGTGGCTCAACA 58.255 45.000 0.00 0.00 0.00 3.33
408 409 2.354821 AGAACTTTTCGTGTGGCTCAAC 59.645 45.455 0.00 0.00 34.02 3.18
409 410 2.354510 CAGAACTTTTCGTGTGGCTCAA 59.645 45.455 0.00 0.00 34.02 3.02
410 411 1.939934 CAGAACTTTTCGTGTGGCTCA 59.060 47.619 0.00 0.00 34.02 4.26
411 412 1.940613 ACAGAACTTTTCGTGTGGCTC 59.059 47.619 0.00 0.00 34.02 4.70
412 413 2.038387 ACAGAACTTTTCGTGTGGCT 57.962 45.000 0.00 0.00 34.02 4.75
413 414 5.796350 ATATACAGAACTTTTCGTGTGGC 57.204 39.130 0.00 0.00 34.02 5.01
414 415 7.359262 TCAATATACAGAACTTTTCGTGTGG 57.641 36.000 0.00 0.00 34.02 4.17
415 416 9.825972 AAATCAATATACAGAACTTTTCGTGTG 57.174 29.630 0.00 0.00 34.02 3.82
442 443 9.320295 TCCTGATATTTTGGATTGTTTTACCTT 57.680 29.630 0.00 0.00 0.00 3.50
443 444 8.893563 TCCTGATATTTTGGATTGTTTTACCT 57.106 30.769 0.00 0.00 0.00 3.08
444 445 8.966868 TCTCCTGATATTTTGGATTGTTTTACC 58.033 33.333 0.00 0.00 0.00 2.85
447 448 7.983484 GCATCTCCTGATATTTTGGATTGTTTT 59.017 33.333 0.00 0.00 0.00 2.43
448 449 7.343833 AGCATCTCCTGATATTTTGGATTGTTT 59.656 33.333 0.00 0.00 0.00 2.83
449 450 6.837568 AGCATCTCCTGATATTTTGGATTGTT 59.162 34.615 0.00 0.00 0.00 2.83
450 451 6.371278 AGCATCTCCTGATATTTTGGATTGT 58.629 36.000 0.00 0.00 0.00 2.71
451 452 6.896021 AGCATCTCCTGATATTTTGGATTG 57.104 37.500 0.00 0.00 0.00 2.67
452 453 7.614583 CCATAGCATCTCCTGATATTTTGGATT 59.385 37.037 0.00 0.00 34.23 3.01
453 454 7.117397 CCATAGCATCTCCTGATATTTTGGAT 58.883 38.462 0.00 0.00 34.23 3.41
454 455 6.479006 CCATAGCATCTCCTGATATTTTGGA 58.521 40.000 0.00 0.00 34.23 3.53
455 456 5.125097 GCCATAGCATCTCCTGATATTTTGG 59.875 44.000 0.00 0.00 34.23 3.28
456 457 5.125097 GGCCATAGCATCTCCTGATATTTTG 59.875 44.000 0.00 0.00 42.56 2.44
457 458 5.222192 TGGCCATAGCATCTCCTGATATTTT 60.222 40.000 0.00 0.00 42.56 1.82
458 459 4.290459 TGGCCATAGCATCTCCTGATATTT 59.710 41.667 0.00 0.00 42.56 1.40
459 460 3.848377 TGGCCATAGCATCTCCTGATATT 59.152 43.478 0.00 0.00 42.56 1.28
460 461 3.199508 GTGGCCATAGCATCTCCTGATAT 59.800 47.826 9.72 0.00 42.56 1.63
461 462 2.568956 GTGGCCATAGCATCTCCTGATA 59.431 50.000 9.72 0.00 42.56 2.15
462 463 1.350351 GTGGCCATAGCATCTCCTGAT 59.650 52.381 9.72 0.00 42.56 2.90
463 464 0.761187 GTGGCCATAGCATCTCCTGA 59.239 55.000 9.72 0.00 42.56 3.86
464 465 0.763652 AGTGGCCATAGCATCTCCTG 59.236 55.000 9.72 0.00 42.56 3.86
465 466 0.763652 CAGTGGCCATAGCATCTCCT 59.236 55.000 9.72 0.00 42.56 3.69
466 467 0.888285 GCAGTGGCCATAGCATCTCC 60.888 60.000 22.90 1.99 42.56 3.71
467 468 2.626582 GCAGTGGCCATAGCATCTC 58.373 57.895 22.90 2.70 42.56 2.75
468 469 4.894201 GCAGTGGCCATAGCATCT 57.106 55.556 22.90 6.49 42.56 2.90
478 479 0.749454 CCATTAGGACAGGCAGTGGC 60.749 60.000 9.02 9.02 36.89 5.01
479 480 0.911769 TCCATTAGGACAGGCAGTGG 59.088 55.000 0.00 0.00 39.61 4.00
480 481 2.636830 CTTCCATTAGGACAGGCAGTG 58.363 52.381 0.00 0.00 45.73 3.66
481 482 1.561542 CCTTCCATTAGGACAGGCAGT 59.438 52.381 0.00 0.00 45.73 4.40
482 483 2.338577 CCTTCCATTAGGACAGGCAG 57.661 55.000 0.00 0.00 45.73 4.85
485 486 1.216990 AGGCCTTCCATTAGGACAGG 58.783 55.000 0.00 0.00 46.58 4.00
486 487 2.239654 TGAAGGCCTTCCATTAGGACAG 59.760 50.000 36.75 0.00 46.58 3.51
487 488 2.239654 CTGAAGGCCTTCCATTAGGACA 59.760 50.000 36.75 18.25 46.58 4.02
488 489 2.239907 ACTGAAGGCCTTCCATTAGGAC 59.760 50.000 36.75 14.68 45.73 3.85
489 490 2.562296 ACTGAAGGCCTTCCATTAGGA 58.438 47.619 36.75 19.05 43.93 2.94
490 491 3.372440 AACTGAAGGCCTTCCATTAGG 57.628 47.619 36.75 22.41 38.77 2.69
491 492 4.276926 GCATAACTGAAGGCCTTCCATTAG 59.723 45.833 36.75 29.23 38.77 1.73
492 493 4.079787 AGCATAACTGAAGGCCTTCCATTA 60.080 41.667 36.75 31.66 38.77 1.90
493 494 3.026694 GCATAACTGAAGGCCTTCCATT 58.973 45.455 36.75 30.78 38.77 3.16
494 495 2.243221 AGCATAACTGAAGGCCTTCCAT 59.757 45.455 36.75 25.74 38.77 3.41
495 496 1.635487 AGCATAACTGAAGGCCTTCCA 59.365 47.619 36.75 24.82 38.77 3.53
496 497 2.293170 GAGCATAACTGAAGGCCTTCC 58.707 52.381 36.75 22.00 38.77 3.46
497 498 2.991250 TGAGCATAACTGAAGGCCTTC 58.009 47.619 34.48 34.48 39.91 3.46
498 499 3.054139 TCATGAGCATAACTGAAGGCCTT 60.054 43.478 20.65 20.65 0.00 4.35
499 500 2.507058 TCATGAGCATAACTGAAGGCCT 59.493 45.455 0.00 0.00 0.00 5.19
500 501 2.923121 TCATGAGCATAACTGAAGGCC 58.077 47.619 0.00 0.00 0.00 5.19
501 502 5.528690 TGTATTCATGAGCATAACTGAAGGC 59.471 40.000 0.00 0.00 31.69 4.35
502 503 7.558161 TTGTATTCATGAGCATAACTGAAGG 57.442 36.000 0.00 0.00 31.69 3.46
503 504 9.282247 GTTTTGTATTCATGAGCATAACTGAAG 57.718 33.333 15.69 0.00 31.69 3.02
504 505 9.013229 AGTTTTGTATTCATGAGCATAACTGAA 57.987 29.630 20.42 0.00 33.94 3.02
505 506 8.565896 AGTTTTGTATTCATGAGCATAACTGA 57.434 30.769 20.42 0.00 33.94 3.41
538 539 9.540538 TCCCTTTCCATTACTTTCATAATGAAA 57.459 29.630 7.01 0.88 43.37 2.69
539 540 9.713684 ATCCCTTTCCATTACTTTCATAATGAA 57.286 29.630 7.01 0.00 42.73 2.57
540 541 9.713684 AATCCCTTTCCATTACTTTCATAATGA 57.286 29.630 7.01 0.00 42.73 2.57
544 545 9.586732 CCATAATCCCTTTCCATTACTTTCATA 57.413 33.333 0.00 0.00 0.00 2.15
545 546 7.015584 GCCATAATCCCTTTCCATTACTTTCAT 59.984 37.037 0.00 0.00 0.00 2.57
546 547 6.323739 GCCATAATCCCTTTCCATTACTTTCA 59.676 38.462 0.00 0.00 0.00 2.69
547 548 6.239317 GGCCATAATCCCTTTCCATTACTTTC 60.239 42.308 0.00 0.00 0.00 2.62
548 549 5.602561 GGCCATAATCCCTTTCCATTACTTT 59.397 40.000 0.00 0.00 0.00 2.66
549 550 5.147767 GGCCATAATCCCTTTCCATTACTT 58.852 41.667 0.00 0.00 0.00 2.24
550 551 4.169856 TGGCCATAATCCCTTTCCATTACT 59.830 41.667 0.00 0.00 0.00 2.24
551 552 4.479158 TGGCCATAATCCCTTTCCATTAC 58.521 43.478 0.00 0.00 0.00 1.89
552 553 4.169856 ACTGGCCATAATCCCTTTCCATTA 59.830 41.667 5.51 0.00 0.00 1.90
553 554 3.051880 ACTGGCCATAATCCCTTTCCATT 60.052 43.478 5.51 0.00 0.00 3.16
554 555 2.519691 ACTGGCCATAATCCCTTTCCAT 59.480 45.455 5.51 0.00 0.00 3.41
555 556 1.929494 ACTGGCCATAATCCCTTTCCA 59.071 47.619 5.51 0.00 0.00 3.53
556 557 2.755952 ACTGGCCATAATCCCTTTCC 57.244 50.000 5.51 0.00 0.00 3.13
557 558 6.538945 TTTTAACTGGCCATAATCCCTTTC 57.461 37.500 5.51 0.00 0.00 2.62
558 559 6.943899 TTTTTAACTGGCCATAATCCCTTT 57.056 33.333 5.51 0.00 0.00 3.11
579 580 6.524101 TGGCTTTTGTAAGTGAGAGTTTTT 57.476 33.333 0.00 0.00 33.74 1.94
627 628 1.789576 TTTCCCCTTCACTCCCTGCC 61.790 60.000 0.00 0.00 0.00 4.85
629 630 0.771127 TGTTTCCCCTTCACTCCCTG 59.229 55.000 0.00 0.00 0.00 4.45
630 631 1.529744 TTGTTTCCCCTTCACTCCCT 58.470 50.000 0.00 0.00 0.00 4.20
631 632 2.364324 GTTTTGTTTCCCCTTCACTCCC 59.636 50.000 0.00 0.00 0.00 4.30
634 635 1.407618 GCGTTTTGTTTCCCCTTCACT 59.592 47.619 0.00 0.00 0.00 3.41
635 636 1.537348 GGCGTTTTGTTTCCCCTTCAC 60.537 52.381 0.00 0.00 0.00 3.18
636 637 0.747852 GGCGTTTTGTTTCCCCTTCA 59.252 50.000 0.00 0.00 0.00 3.02
637 638 0.747852 TGGCGTTTTGTTTCCCCTTC 59.252 50.000 0.00 0.00 0.00 3.46
638 639 1.069978 CATGGCGTTTTGTTTCCCCTT 59.930 47.619 0.00 0.00 0.00 3.95
639 640 0.678950 CATGGCGTTTTGTTTCCCCT 59.321 50.000 0.00 0.00 0.00 4.79
640 641 0.391228 ACATGGCGTTTTGTTTCCCC 59.609 50.000 0.00 0.00 0.00 4.81
672 673 1.726853 GCTTCGTTGCTATGGTGACT 58.273 50.000 0.00 0.00 0.00 3.41
676 677 0.246635 ACTCGCTTCGTTGCTATGGT 59.753 50.000 0.00 0.00 0.00 3.55
678 679 4.577687 TTTTACTCGCTTCGTTGCTATG 57.422 40.909 0.00 0.00 0.00 2.23
799 815 8.289618 GCCCATTGTTTTATTCCTTTTTCTTTC 58.710 33.333 0.00 0.00 0.00 2.62
808 824 3.694566 GTCTCGCCCATTGTTTTATTCCT 59.305 43.478 0.00 0.00 0.00 3.36
809 825 3.442273 TGTCTCGCCCATTGTTTTATTCC 59.558 43.478 0.00 0.00 0.00 3.01
810 826 4.438744 CCTGTCTCGCCCATTGTTTTATTC 60.439 45.833 0.00 0.00 0.00 1.75
813 829 2.432444 CCTGTCTCGCCCATTGTTTTA 58.568 47.619 0.00 0.00 0.00 1.52
884 900 0.689623 CCTCTGTCTCTGCCCACTTT 59.310 55.000 0.00 0.00 0.00 2.66
885 901 1.835927 GCCTCTGTCTCTGCCCACTT 61.836 60.000 0.00 0.00 0.00 3.16
886 902 2.289532 GCCTCTGTCTCTGCCCACT 61.290 63.158 0.00 0.00 0.00 4.00
888 904 3.005539 GGCCTCTGTCTCTGCCCA 61.006 66.667 0.00 0.00 37.94 5.36
889 905 4.154347 CGGCCTCTGTCTCTGCCC 62.154 72.222 0.00 0.00 40.87 5.36
891 907 2.183046 GTCGGCCTCTGTCTCTGC 59.817 66.667 0.00 0.00 0.00 4.26
892 908 2.888863 GGTCGGCCTCTGTCTCTG 59.111 66.667 0.00 0.00 0.00 3.35
1318 1345 2.289506 GCCCTAATCCACCCTTATCGAC 60.290 54.545 0.00 0.00 0.00 4.20
1396 1426 2.123511 CAGCACCAACCAACCCCA 60.124 61.111 0.00 0.00 0.00 4.96
1400 1430 1.244019 CCTAGCCAGCACCAACCAAC 61.244 60.000 0.00 0.00 0.00 3.77
1404 1434 0.539669 AAACCCTAGCCAGCACCAAC 60.540 55.000 0.00 0.00 0.00 3.77
1467 1497 1.327460 CTGCATCCGTACGAAACCATG 59.673 52.381 18.76 11.07 0.00 3.66
1492 1522 8.352942 CCCTAAAATGACAGCCTAATAAACATC 58.647 37.037 0.00 0.00 0.00 3.06
1499 1529 6.322201 CACAATCCCTAAAATGACAGCCTAAT 59.678 38.462 0.00 0.00 0.00 1.73
1500 1530 5.652014 CACAATCCCTAAAATGACAGCCTAA 59.348 40.000 0.00 0.00 0.00 2.69
1505 1535 7.469181 GCCTAATCACAATCCCTAAAATGACAG 60.469 40.741 0.00 0.00 0.00 3.51
1507 1537 6.547510 AGCCTAATCACAATCCCTAAAATGAC 59.452 38.462 0.00 0.00 0.00 3.06
1517 1547 5.841957 AAATGACAGCCTAATCACAATCC 57.158 39.130 0.00 0.00 0.00 3.01
1521 1551 6.946340 TCTCTAAAATGACAGCCTAATCACA 58.054 36.000 0.00 0.00 0.00 3.58
1540 1570 6.737720 ATGACAGCCTAATCACAATCTCTA 57.262 37.500 0.00 0.00 0.00 2.43
1551 1581 9.851686 TCACAATATCTAAAATGACAGCCTAAT 57.148 29.630 0.00 0.00 0.00 1.73
1560 1590 9.851686 ACAGCCTAATCACAATATCTAAAATGA 57.148 29.630 0.00 0.00 0.00 2.57
1570 1600 9.330063 CTCTAAAATGACAGCCTAATCACAATA 57.670 33.333 0.00 0.00 0.00 1.90
1603 1633 4.333926 CAGTCTCTAAAATGGCAGCCTAAC 59.666 45.833 14.15 0.00 0.00 2.34
1624 1654 1.657594 CAGCACAATCTACGCTCACAG 59.342 52.381 0.00 0.00 32.48 3.66
1638 1668 4.650734 TGATCATCCAAACTAACAGCACA 58.349 39.130 0.00 0.00 0.00 4.57
1639 1669 5.355071 TCATGATCATCCAAACTAACAGCAC 59.645 40.000 4.86 0.00 0.00 4.40
1640 1670 5.499313 TCATGATCATCCAAACTAACAGCA 58.501 37.500 4.86 0.00 0.00 4.41
1641 1671 5.587844 ACTCATGATCATCCAAACTAACAGC 59.412 40.000 4.86 0.00 0.00 4.40
1642 1672 7.201679 GGAACTCATGATCATCCAAACTAACAG 60.202 40.741 4.86 0.00 0.00 3.16
1643 1673 6.599244 GGAACTCATGATCATCCAAACTAACA 59.401 38.462 4.86 0.00 0.00 2.41
1644 1674 6.238211 CGGAACTCATGATCATCCAAACTAAC 60.238 42.308 4.86 0.00 0.00 2.34
1645 1675 5.817296 CGGAACTCATGATCATCCAAACTAA 59.183 40.000 4.86 0.00 0.00 2.24
1646 1676 5.359756 CGGAACTCATGATCATCCAAACTA 58.640 41.667 4.86 0.00 0.00 2.24
1647 1677 4.194640 CGGAACTCATGATCATCCAAACT 58.805 43.478 4.86 0.00 0.00 2.66
1648 1678 3.242870 GCGGAACTCATGATCATCCAAAC 60.243 47.826 4.86 0.00 0.00 2.93
1649 1679 2.945008 GCGGAACTCATGATCATCCAAA 59.055 45.455 4.86 0.00 0.00 3.28
1674 1704 4.927425 AGTCATCATTTGCTGCATTTTCAC 59.073 37.500 1.84 0.00 0.00 3.18
1710 1740 1.272212 GTGGTTGGGCGTTGATTCAAT 59.728 47.619 1.78 0.00 0.00 2.57
1811 1841 7.437267 ACCTGTGTCGCACTGTAATAATTATAC 59.563 37.037 0.00 0.00 35.11 1.47
1816 1846 4.202245 ACCTGTGTCGCACTGTAATAAT 57.798 40.909 10.54 0.00 35.11 1.28
1817 1847 3.671008 ACCTGTGTCGCACTGTAATAA 57.329 42.857 10.54 0.00 35.11 1.40
1818 1848 3.322369 CAACCTGTGTCGCACTGTAATA 58.678 45.455 10.54 0.00 35.11 0.98
1827 1857 0.593128 AATTCTGCAACCTGTGTCGC 59.407 50.000 0.00 0.00 0.00 5.19
1842 1872 4.376146 TGGTACCAAAGCAGCAAAAATTC 58.624 39.130 13.60 0.00 0.00 2.17
1919 1951 1.189227 GTGTTCAAAATGTTTCGGCGC 59.811 47.619 0.00 0.00 0.00 6.53
2158 2192 2.565834 ACGTGGGCAAGTTAGTACAGAT 59.434 45.455 0.00 0.00 0.00 2.90
2173 2208 3.275617 TGGGAAGATCATTAACGTGGG 57.724 47.619 0.00 0.00 0.00 4.61
2215 2250 3.326297 TCGGGATGCATCATGGTATGTAA 59.674 43.478 27.25 0.00 0.00 2.41
2230 2265 2.420022 GTCAAACATTGTCCTCGGGATG 59.580 50.000 0.00 0.00 32.73 3.51
2233 2268 2.185004 AGTCAAACATTGTCCTCGGG 57.815 50.000 0.00 0.00 0.00 5.14
2236 2271 5.660460 ACCAAAAAGTCAAACATTGTCCTC 58.340 37.500 0.00 0.00 0.00 3.71
2397 2435 9.778741 AAACTATAGTCTGTTGAAATGTTCTCA 57.221 29.630 5.70 0.00 0.00 3.27
2444 2491 9.639601 CATCATGTAGAAGTTACTTCACTGTAA 57.360 33.333 24.57 8.38 42.37 2.41
2533 2581 4.895297 TCCCTTTTCAATTCAGCAACTCTT 59.105 37.500 0.00 0.00 0.00 2.85
2709 2757 7.823310 AGCTGATGCATTATGTATAGAGAAAGG 59.177 37.037 0.00 0.00 42.74 3.11
2775 2823 5.684704 TCGGAGGAGCTATTTTCAATCAAT 58.315 37.500 0.00 0.00 0.00 2.57
2782 2830 7.875554 AGAGATAATTTCGGAGGAGCTATTTTC 59.124 37.037 0.00 0.00 0.00 2.29
2802 2850 8.874156 ACTAATGACCAATTATCAGCAGAGATA 58.126 33.333 8.43 0.00 30.26 1.98
2803 2851 7.743749 ACTAATGACCAATTATCAGCAGAGAT 58.256 34.615 8.43 0.00 30.26 2.75
2807 2855 9.294030 GAAAAACTAATGACCAATTATCAGCAG 57.706 33.333 0.00 1.27 30.26 4.24
2853 2901 2.026636 CCCTTCCCTTCGTACATTTCCA 60.027 50.000 0.00 0.00 0.00 3.53
2863 2911 1.153086 CCTCATGCCCTTCCCTTCG 60.153 63.158 0.00 0.00 0.00 3.79
3015 3227 7.889873 TTTATTTGTCCCAAGTTCAAAGAGA 57.110 32.000 0.00 0.00 35.14 3.10
3028 3240 9.516314 GACTGCTAATTATGTTTTATTTGTCCC 57.484 33.333 0.00 0.00 0.00 4.46
3029 3241 9.516314 GGACTGCTAATTATGTTTTATTTGTCC 57.484 33.333 0.00 0.00 0.00 4.02
3150 3376 7.541162 TGGCTTCAAGATGACAGAAAATAATG 58.459 34.615 0.00 0.00 0.00 1.90
3292 3518 4.913335 ATCATGTTTGCTATTGCTGAGG 57.087 40.909 0.00 0.00 40.48 3.86
3469 3695 8.599055 TTGATAATGTCTCTGCTGATGTATTC 57.401 34.615 0.00 0.00 0.00 1.75
3690 3916 3.313526 GCACATAGATACACCAGGCTTTG 59.686 47.826 0.00 0.00 0.00 2.77
3692 3918 2.505407 TGCACATAGATACACCAGGCTT 59.495 45.455 0.00 0.00 0.00 4.35
3707 3933 1.246056 ACGCATGGAGCTTTGCACAT 61.246 50.000 14.92 1.73 42.61 3.21
3784 4010 2.300152 CTCACACACAGATACACCAGGT 59.700 50.000 0.00 0.00 0.00 4.00
3802 4028 3.181456 CCAATTTTGGTTTTGCTCCCTCA 60.181 43.478 0.95 0.00 43.43 3.86
3848 4074 5.300752 CAACATCTTACAGTCACCTTGAGT 58.699 41.667 0.00 0.00 0.00 3.41
3902 4128 7.976175 CACTGAAGCAATAGTGATACAAGACTA 59.024 37.037 8.11 0.00 45.46 2.59
3960 4186 4.837860 AGTGGGCAACTCCAATAAATTTCA 59.162 37.500 0.00 0.00 38.72 2.69
3961 4187 5.405935 AGTGGGCAACTCCAATAAATTTC 57.594 39.130 0.00 0.00 38.72 2.17
4069 4295 4.796038 TCTACCCACACTAACTAACTGC 57.204 45.455 0.00 0.00 0.00 4.40
4329 4556 1.198713 TTAGGAGCTCCTTGGCAGAG 58.801 55.000 39.23 0.00 46.09 3.35
4359 4586 8.635765 ATGTAAGGACATTATTCACAAACACT 57.364 30.769 0.00 0.00 44.18 3.55
4537 4764 1.138266 GATTACAGGGCCACTAGCGAA 59.862 52.381 6.18 0.00 45.17 4.70
4574 4801 0.464870 AGGCTCAGCAGCTATCACTG 59.535 55.000 0.00 0.00 46.03 3.66
4575 4802 0.464870 CAGGCTCAGCAGCTATCACT 59.535 55.000 0.00 0.00 46.03 3.41
4576 4803 0.177604 ACAGGCTCAGCAGCTATCAC 59.822 55.000 0.00 0.00 46.03 3.06
4577 4804 1.780503 TACAGGCTCAGCAGCTATCA 58.219 50.000 0.00 0.00 46.03 2.15
4578 4805 3.399440 AATACAGGCTCAGCAGCTATC 57.601 47.619 0.00 0.00 46.03 2.08
4579 4806 4.963318 TTAATACAGGCTCAGCAGCTAT 57.037 40.909 0.00 0.00 46.03 2.97
4580 4807 4.405680 TCTTTAATACAGGCTCAGCAGCTA 59.594 41.667 0.00 0.00 46.03 3.32
4581 4808 3.198635 TCTTTAATACAGGCTCAGCAGCT 59.801 43.478 0.00 0.00 46.03 4.24
4582 4809 3.535561 TCTTTAATACAGGCTCAGCAGC 58.464 45.455 0.00 0.00 46.06 5.25
4583 4810 5.293079 GTCTTCTTTAATACAGGCTCAGCAG 59.707 44.000 0.00 0.00 0.00 4.24
4584 4811 5.178797 GTCTTCTTTAATACAGGCTCAGCA 58.821 41.667 0.00 0.00 0.00 4.41
4585 4812 4.572795 GGTCTTCTTTAATACAGGCTCAGC 59.427 45.833 0.00 0.00 0.00 4.26
4586 4813 5.734720 TGGTCTTCTTTAATACAGGCTCAG 58.265 41.667 0.00 0.00 0.00 3.35
4613 4855 2.155279 CAGGCTCACTAGCTATCGCTA 58.845 52.381 0.00 0.00 46.79 4.26
4723 4965 3.622060 TTGCTACCCTTCCAGCGGC 62.622 63.158 0.00 0.00 40.79 6.53
4767 5009 2.276740 GCAATAGTGGCCCCTGCT 59.723 61.111 0.00 0.00 37.74 4.24
4781 5023 2.274542 TCTTCTTGGATGTAGGGGCAA 58.725 47.619 0.00 0.00 0.00 4.52
4789 5031 5.551233 TGTTCGAGAAATCTTCTTGGATGT 58.449 37.500 4.24 0.00 40.87 3.06
4817 5059 1.375396 GGCACATGACGTACAGGCA 60.375 57.895 0.00 0.00 45.56 4.75
4821 5063 0.388006 CACGAGGCACATGACGTACA 60.388 55.000 0.00 0.00 37.22 2.90
4884 5126 1.214062 GCTCTCACCCTGACTGACG 59.786 63.158 0.00 0.00 0.00 4.35
4956 5198 2.047844 GCTGGCGCACTTCTCTCA 60.048 61.111 10.83 0.00 35.78 3.27
5430 5672 1.376037 CTTGCTCCAGTCCCCGAAC 60.376 63.158 0.00 0.00 0.00 3.95
5433 5675 0.745845 CAATCTTGCTCCAGTCCCCG 60.746 60.000 0.00 0.00 0.00 5.73
5505 5751 8.644216 TCTTGACAAAGTACATTACTCTTACCA 58.356 33.333 0.00 0.00 38.26 3.25
5516 5823 5.241949 ACTCTCGAGTCTTGACAAAGTACAT 59.758 40.000 13.13 0.00 36.92 2.29
5552 5913 2.317609 CGACCCACCAGTTGCTTCG 61.318 63.158 0.00 0.00 0.00 3.79
5573 5934 2.276740 GCCCAGGAATGTGGAGGG 59.723 66.667 0.00 0.00 40.44 4.30
5603 5968 0.473117 TTCTTGGTTCCCTCCCTCGT 60.473 55.000 0.00 0.00 0.00 4.18
5924 6294 0.915364 GGGAGGAGGAAATGCTCTGT 59.085 55.000 1.90 0.00 45.30 3.41
5934 6304 4.075793 CGTGGAGGGGGAGGAGGA 62.076 72.222 0.00 0.00 0.00 3.71
5935 6305 4.075793 TCGTGGAGGGGGAGGAGG 62.076 72.222 0.00 0.00 0.00 4.30
5936 6306 2.305314 ATCTCGTGGAGGGGGAGGAG 62.305 65.000 0.00 0.00 0.00 3.69
5943 6313 1.365633 GCTGCTATCTCGTGGAGGG 59.634 63.158 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.