Multiple sequence alignment - TraesCS2D01G210400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G210400 chr2D 100.000 3203 0 0 1 3203 166205376 166202174 0.000000e+00 5915
1 TraesCS2D01G210400 chr2A 95.792 1426 38 9 809 2214 184499506 184500929 0.000000e+00 2281
2 TraesCS2D01G210400 chr2A 93.620 627 31 7 3 625 184498710 184499331 0.000000e+00 928
3 TraesCS2D01G210400 chr2A 88.974 390 32 6 2816 3203 184517918 184518298 3.740000e-129 472
4 TraesCS2D01G210400 chr2B 94.372 1457 36 11 809 2225 231603593 231605043 0.000000e+00 2194
5 TraesCS2D01G210400 chr2B 91.154 520 34 7 2689 3203 231606255 231606767 0.000000e+00 695
6 TraesCS2D01G210400 chr2B 92.562 363 17 3 247 599 231603234 231603596 2.200000e-141 512
7 TraesCS2D01G210400 chr2B 92.607 257 14 4 3 256 231601601 231601855 6.530000e-97 364
8 TraesCS2D01G210400 chr6A 94.360 461 25 1 2224 2684 416647611 416648070 0.000000e+00 706
9 TraesCS2D01G210400 chr3B 96.217 423 15 1 2224 2645 421231620 421232042 0.000000e+00 691
10 TraesCS2D01G210400 chr1D 93.534 464 29 1 2224 2686 487694560 487695023 0.000000e+00 689
11 TraesCS2D01G210400 chr1D 92.063 189 15 0 626 814 110906844 110906656 1.890000e-67 267
12 TraesCS2D01G210400 chr1D 91.534 189 14 2 623 811 477791261 477791447 3.170000e-65 259
13 TraesCS2D01G210400 chr5B 92.857 462 33 0 2224 2685 505713524 505713985 0.000000e+00 671
14 TraesCS2D01G210400 chr4B 92.735 468 29 4 2224 2686 629942019 629941552 0.000000e+00 671
15 TraesCS2D01G210400 chr7D 93.348 451 30 0 2237 2687 227572866 227572416 0.000000e+00 667
16 TraesCS2D01G210400 chr7D 88.961 462 49 2 2223 2684 601144200 601143741 1.290000e-158 569
17 TraesCS2D01G210400 chr7A 91.921 458 35 2 2231 2687 239771211 239770755 9.690000e-180 640
18 TraesCS2D01G210400 chr1A 86.994 469 58 3 2218 2685 280490579 280491045 2.830000e-145 525
19 TraesCS2D01G210400 chr5D 92.079 202 11 5 622 820 539072637 539072836 2.430000e-71 279
20 TraesCS2D01G210400 chr6D 91.710 193 12 3 620 811 470689350 470689539 6.810000e-67 265
21 TraesCS2D01G210400 chr6D 91.892 185 15 0 631 815 470664642 470664458 3.170000e-65 259
22 TraesCS2D01G210400 chr6B 90.863 197 18 0 618 814 213152366 213152562 6.810000e-67 265
23 TraesCS2D01G210400 chr4D 92.021 188 13 1 622 809 401881601 401881416 2.450000e-66 263
24 TraesCS2D01G210400 chr3D 93.220 177 12 0 633 809 587946834 587946658 8.810000e-66 261
25 TraesCS2D01G210400 chr1B 87.215 219 24 3 596 813 198484908 198484693 2.470000e-61 246


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G210400 chr2D 166202174 166205376 3202 True 5915.00 5915 100.00000 1 3203 1 chr2D.!!$R1 3202
1 TraesCS2D01G210400 chr2A 184498710 184500929 2219 False 1604.50 2281 94.70600 3 2214 2 chr2A.!!$F2 2211
2 TraesCS2D01G210400 chr2B 231601601 231606767 5166 False 941.25 2194 92.67375 3 3203 4 chr2B.!!$F1 3200

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 166 0.095935 CCAAGCGTTCTTCTGCGATG 59.904 55.0 0.0 0.0 35.87 3.84 F
1570 3211 0.109723 TGCACCCACCACCTTAGTTC 59.890 55.0 0.0 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 3708 0.109827 CGCAACACGCCAATCATTCA 60.110 50.0 0.0 0.0 37.3 2.57 R
2372 4774 0.037232 CCTCGTCCCACCAAACTCTC 60.037 60.0 0.0 0.0 0.0 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 166 0.095935 CCAAGCGTTCTTCTGCGATG 59.904 55.000 0.00 0.00 35.87 3.84
175 179 4.499023 CGATGTCAAACGCCGGCG 62.499 66.667 44.88 44.88 46.03 6.46
201 205 4.020543 AGGAACTACAGAGACTGTGGATC 58.979 47.826 18.90 16.14 44.01 3.36
325 1722 4.500205 GCCTTAAACAAATTATACCCCGGC 60.500 45.833 0.00 0.00 0.00 6.13
387 1784 2.323059 GACCGACACCGTTCTTACTTC 58.677 52.381 0.00 0.00 0.00 3.01
390 1787 2.240040 CGACACCGTTCTTACTTCTCG 58.760 52.381 0.00 0.00 0.00 4.04
457 1854 0.370273 CGAACGAAGCAAAGGATCCG 59.630 55.000 5.98 0.00 0.00 4.18
461 1858 1.431036 GAAGCAAAGGATCCGCAGC 59.569 57.895 14.92 14.92 0.00 5.25
595 2202 1.479323 GCTACCGTGTCACCCATAAGA 59.521 52.381 0.00 0.00 0.00 2.10
596 2203 2.093869 GCTACCGTGTCACCCATAAGAA 60.094 50.000 0.00 0.00 0.00 2.52
597 2204 3.618019 GCTACCGTGTCACCCATAAGAAA 60.618 47.826 0.00 0.00 0.00 2.52
598 2205 3.713826 ACCGTGTCACCCATAAGAAAT 57.286 42.857 0.00 0.00 0.00 2.17
599 2206 4.028993 ACCGTGTCACCCATAAGAAATT 57.971 40.909 0.00 0.00 0.00 1.82
600 2207 4.403734 ACCGTGTCACCCATAAGAAATTT 58.596 39.130 0.00 0.00 0.00 1.82
601 2208 5.562635 ACCGTGTCACCCATAAGAAATTTA 58.437 37.500 0.00 0.00 0.00 1.40
602 2209 5.646360 ACCGTGTCACCCATAAGAAATTTAG 59.354 40.000 0.00 0.00 0.00 1.85
603 2210 5.878116 CCGTGTCACCCATAAGAAATTTAGA 59.122 40.000 0.00 0.00 0.00 2.10
604 2211 6.373216 CCGTGTCACCCATAAGAAATTTAGAA 59.627 38.462 0.00 0.00 0.00 2.10
605 2212 7.094549 CCGTGTCACCCATAAGAAATTTAGAAA 60.095 37.037 0.00 0.00 0.00 2.52
606 2213 8.293867 CGTGTCACCCATAAGAAATTTAGAAAA 58.706 33.333 0.00 0.00 0.00 2.29
607 2214 9.626045 GTGTCACCCATAAGAAATTTAGAAAAG 57.374 33.333 0.00 0.00 0.00 2.27
608 2215 8.802267 TGTCACCCATAAGAAATTTAGAAAAGG 58.198 33.333 0.00 0.00 0.00 3.11
609 2216 9.020731 GTCACCCATAAGAAATTTAGAAAAGGA 57.979 33.333 0.00 0.00 0.00 3.36
610 2217 9.594936 TCACCCATAAGAAATTTAGAAAAGGAA 57.405 29.630 0.00 0.00 0.00 3.36
613 2220 9.875691 CCCATAAGAAATTTAGAAAAGGAAAGG 57.124 33.333 0.00 0.00 0.00 3.11
614 2221 9.875691 CCATAAGAAATTTAGAAAAGGAAAGGG 57.124 33.333 0.00 0.00 0.00 3.95
680 2287 7.055667 TGAGATATAGTTGGGTCTCATTCAC 57.944 40.000 0.16 0.00 41.40 3.18
681 2288 6.042093 TGAGATATAGTTGGGTCTCATTCACC 59.958 42.308 0.16 0.00 41.40 4.02
682 2289 6.146760 AGATATAGTTGGGTCTCATTCACCT 58.853 40.000 0.00 0.00 33.96 4.00
683 2290 6.617371 AGATATAGTTGGGTCTCATTCACCTT 59.383 38.462 0.00 0.00 33.96 3.50
684 2291 3.884037 AGTTGGGTCTCATTCACCTTT 57.116 42.857 0.00 0.00 33.96 3.11
685 2292 4.184649 AGTTGGGTCTCATTCACCTTTT 57.815 40.909 0.00 0.00 33.96 2.27
686 2293 5.319043 AGTTGGGTCTCATTCACCTTTTA 57.681 39.130 0.00 0.00 33.96 1.52
687 2294 5.892348 AGTTGGGTCTCATTCACCTTTTAT 58.108 37.500 0.00 0.00 33.96 1.40
688 2295 7.027874 AGTTGGGTCTCATTCACCTTTTATA 57.972 36.000 0.00 0.00 33.96 0.98
689 2296 7.112779 AGTTGGGTCTCATTCACCTTTTATAG 58.887 38.462 0.00 0.00 33.96 1.31
690 2297 6.636454 TGGGTCTCATTCACCTTTTATAGT 57.364 37.500 0.00 0.00 33.96 2.12
691 2298 6.650120 TGGGTCTCATTCACCTTTTATAGTC 58.350 40.000 0.00 0.00 33.96 2.59
692 2299 6.214615 TGGGTCTCATTCACCTTTTATAGTCA 59.785 38.462 0.00 0.00 33.96 3.41
693 2300 7.092444 TGGGTCTCATTCACCTTTTATAGTCAT 60.092 37.037 0.00 0.00 33.96 3.06
694 2301 7.775561 GGGTCTCATTCACCTTTTATAGTCATT 59.224 37.037 0.00 0.00 33.96 2.57
695 2302 8.616076 GGTCTCATTCACCTTTTATAGTCATTG 58.384 37.037 0.00 0.00 0.00 2.82
696 2303 8.616076 GTCTCATTCACCTTTTATAGTCATTGG 58.384 37.037 0.00 0.00 0.00 3.16
697 2304 8.548025 TCTCATTCACCTTTTATAGTCATTGGA 58.452 33.333 0.00 0.00 0.00 3.53
698 2305 9.347240 CTCATTCACCTTTTATAGTCATTGGAT 57.653 33.333 0.00 0.00 0.00 3.41
699 2306 9.123902 TCATTCACCTTTTATAGTCATTGGATG 57.876 33.333 0.00 0.00 0.00 3.51
700 2307 8.906867 CATTCACCTTTTATAGTCATTGGATGT 58.093 33.333 0.00 0.00 0.00 3.06
701 2308 7.864108 TCACCTTTTATAGTCATTGGATGTG 57.136 36.000 0.00 0.00 0.00 3.21
702 2309 7.629157 TCACCTTTTATAGTCATTGGATGTGA 58.371 34.615 0.00 0.00 0.00 3.58
703 2310 8.274322 TCACCTTTTATAGTCATTGGATGTGAT 58.726 33.333 0.00 0.00 0.00 3.06
704 2311 8.347771 CACCTTTTATAGTCATTGGATGTGATG 58.652 37.037 0.00 0.00 0.00 3.07
705 2312 7.013655 ACCTTTTATAGTCATTGGATGTGATGC 59.986 37.037 0.00 0.00 0.00 3.91
706 2313 7.230108 CCTTTTATAGTCATTGGATGTGATGCT 59.770 37.037 0.00 0.00 0.00 3.79
707 2314 9.276590 CTTTTATAGTCATTGGATGTGATGCTA 57.723 33.333 0.00 0.00 0.00 3.49
708 2315 9.797642 TTTTATAGTCATTGGATGTGATGCTAT 57.202 29.630 0.00 0.00 32.56 2.97
712 2319 7.071069 AGTCATTGGATGTGATGCTATAAGA 57.929 36.000 0.00 0.00 0.00 2.10
713 2320 7.687388 AGTCATTGGATGTGATGCTATAAGAT 58.313 34.615 0.00 0.00 0.00 2.40
714 2321 7.606839 AGTCATTGGATGTGATGCTATAAGATG 59.393 37.037 0.00 0.00 0.00 2.90
715 2322 6.373495 TCATTGGATGTGATGCTATAAGATGC 59.627 38.462 0.00 0.00 0.00 3.91
716 2323 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
717 2324 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
718 2325 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
719 2326 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
720 2327 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
721 2328 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
722 2329 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
723 2330 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
724 2331 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
725 2332 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
726 2333 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
727 2334 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
728 2335 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
729 2336 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
730 2337 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
731 2338 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
732 2339 2.279186 CGTGTGTGCTGACGTGGA 60.279 61.111 0.00 0.00 0.00 4.02
733 2340 1.664649 CGTGTGTGCTGACGTGGAT 60.665 57.895 0.00 0.00 0.00 3.41
734 2341 1.221466 CGTGTGTGCTGACGTGGATT 61.221 55.000 0.00 0.00 0.00 3.01
735 2342 1.790755 GTGTGTGCTGACGTGGATTA 58.209 50.000 0.00 0.00 0.00 1.75
736 2343 2.346803 GTGTGTGCTGACGTGGATTAT 58.653 47.619 0.00 0.00 0.00 1.28
737 2344 3.517602 GTGTGTGCTGACGTGGATTATA 58.482 45.455 0.00 0.00 0.00 0.98
738 2345 3.306166 GTGTGTGCTGACGTGGATTATAC 59.694 47.826 0.00 0.00 0.00 1.47
739 2346 2.864343 GTGTGCTGACGTGGATTATACC 59.136 50.000 0.00 0.00 0.00 2.73
740 2347 2.764010 TGTGCTGACGTGGATTATACCT 59.236 45.455 0.00 0.00 0.00 3.08
741 2348 3.123804 GTGCTGACGTGGATTATACCTG 58.876 50.000 0.00 0.00 0.00 4.00
742 2349 2.764010 TGCTGACGTGGATTATACCTGT 59.236 45.455 0.00 0.00 0.00 4.00
743 2350 3.196901 TGCTGACGTGGATTATACCTGTT 59.803 43.478 0.00 0.00 0.00 3.16
744 2351 4.189231 GCTGACGTGGATTATACCTGTTT 58.811 43.478 0.00 0.00 0.00 2.83
745 2352 4.634443 GCTGACGTGGATTATACCTGTTTT 59.366 41.667 0.00 0.00 0.00 2.43
746 2353 5.123344 GCTGACGTGGATTATACCTGTTTTT 59.877 40.000 0.00 0.00 0.00 1.94
747 2354 6.314400 GCTGACGTGGATTATACCTGTTTTTA 59.686 38.462 0.00 0.00 0.00 1.52
748 2355 7.012044 GCTGACGTGGATTATACCTGTTTTTAT 59.988 37.037 0.00 0.00 0.00 1.40
749 2356 8.795842 TGACGTGGATTATACCTGTTTTTATT 57.204 30.769 0.00 0.00 0.00 1.40
750 2357 9.233649 TGACGTGGATTATACCTGTTTTTATTT 57.766 29.630 0.00 0.00 0.00 1.40
801 2408 6.798427 TCATCTAAATGAGTTCTAGGCACT 57.202 37.500 0.00 0.00 38.74 4.40
802 2409 6.810911 TCATCTAAATGAGTTCTAGGCACTC 58.189 40.000 13.40 13.40 37.09 3.51
803 2410 5.599999 TCTAAATGAGTTCTAGGCACTCC 57.400 43.478 16.20 4.17 40.12 3.85
804 2411 3.636153 AAATGAGTTCTAGGCACTCCC 57.364 47.619 16.20 0.00 40.12 4.30
805 2412 9.047928 CATCTAAATGAGTTCTAGGCACTCCCT 62.048 44.444 16.20 5.46 40.12 4.20
806 2413 3.689872 ATGAGTTCTAGGCACTCCCTA 57.310 47.619 16.20 3.46 44.08 3.53
807 2414 3.689872 TGAGTTCTAGGCACTCCCTAT 57.310 47.619 16.20 0.00 45.11 2.57
831 2438 1.792757 AATGGAGAGGCTGTGGGCAA 61.793 55.000 0.00 0.00 44.01 4.52
923 2541 2.808206 CCCAGGCTGGTATCCCGTC 61.808 68.421 30.68 0.00 35.17 4.79
927 2545 3.845259 GCTGGTATCCCGTCGCCA 61.845 66.667 0.00 0.00 0.00 5.69
928 2546 2.106332 CTGGTATCCCGTCGCCAC 59.894 66.667 0.00 0.00 0.00 5.01
1027 2657 4.147449 TCGATCGGCCTGGCACTG 62.147 66.667 22.05 9.74 0.00 3.66
1322 2952 2.668550 GTGCTGGGGTTCCACGTC 60.669 66.667 0.00 0.00 38.32 4.34
1567 3208 1.315257 GCATGCACCCACCACCTTAG 61.315 60.000 14.21 0.00 0.00 2.18
1570 3211 0.109723 TGCACCCACCACCTTAGTTC 59.890 55.000 0.00 0.00 0.00 3.01
1577 3218 1.798813 CACCACCTTAGTTCTTGACGC 59.201 52.381 0.00 0.00 0.00 5.19
1720 3376 3.035576 CTGTACGAGAGCGGCGTGA 62.036 63.158 9.37 0.00 42.62 4.35
1759 3415 0.600255 CGAGAACAAGGGCAAGTCGT 60.600 55.000 0.00 0.00 0.00 4.34
1966 3622 2.022129 CTGCCCGACAACGTCTGAC 61.022 63.158 0.00 0.00 37.88 3.51
1968 3624 2.048503 CCCGACAACGTCTGACCC 60.049 66.667 1.55 0.00 37.88 4.46
2047 3708 8.989980 GTAGCACAACTATTCTTTGTAGAGTTT 58.010 33.333 0.00 0.00 35.38 2.66
2048 3709 7.865707 AGCACAACTATTCTTTGTAGAGTTTG 58.134 34.615 0.00 0.00 35.38 2.93
2049 3710 7.715249 AGCACAACTATTCTTTGTAGAGTTTGA 59.285 33.333 0.00 0.00 35.38 2.69
2050 3711 8.342634 GCACAACTATTCTTTGTAGAGTTTGAA 58.657 33.333 0.00 0.00 35.38 2.69
2088 3749 5.562623 GCGTTGTTGTAATAGCACTTTGTAC 59.437 40.000 0.00 0.00 0.00 2.90
2142 3803 8.680903 CAATGGTTGTATCTTCTTGAATAAGCT 58.319 33.333 0.00 0.00 33.82 3.74
2180 3841 9.630098 CAATAGTCTAAGAAACATGCACAAATT 57.370 29.630 0.00 0.00 0.00 1.82
2189 3850 6.586082 AGAAACATGCACAAATTCGAATAACC 59.414 34.615 11.83 0.00 0.00 2.85
2190 3851 5.643379 ACATGCACAAATTCGAATAACCT 57.357 34.783 11.83 0.00 0.00 3.50
2216 3878 5.979288 ATCGAAGTTACACTAAGGTGACT 57.021 39.130 3.06 0.00 45.61 3.41
2225 3887 7.871463 AGTTACACTAAGGTGACTAACATGAAC 59.129 37.037 0.00 0.00 45.61 3.18
2226 3888 5.548406 ACACTAAGGTGACTAACATGAACC 58.452 41.667 0.00 0.00 45.61 3.62
2227 3889 5.307196 ACACTAAGGTGACTAACATGAACCT 59.693 40.000 0.00 0.00 45.61 3.50
2230 3892 6.710744 ACTAAGGTGACTAACATGAACCTTTG 59.289 38.462 10.40 10.83 46.58 2.77
2231 3893 3.821033 AGGTGACTAACATGAACCTTTGC 59.179 43.478 0.00 0.00 38.05 3.68
2232 3894 3.057526 GGTGACTAACATGAACCTTTGCC 60.058 47.826 0.00 0.00 0.00 4.52
2233 3895 3.057526 GTGACTAACATGAACCTTTGCCC 60.058 47.826 0.00 0.00 0.00 5.36
2234 3896 3.181434 TGACTAACATGAACCTTTGCCCT 60.181 43.478 0.00 0.00 0.00 5.19
2235 3897 3.421844 ACTAACATGAACCTTTGCCCTC 58.578 45.455 0.00 0.00 0.00 4.30
2236 3898 2.683211 AACATGAACCTTTGCCCTCT 57.317 45.000 0.00 0.00 0.00 3.69
2237 3899 2.683211 ACATGAACCTTTGCCCTCTT 57.317 45.000 0.00 0.00 0.00 2.85
2238 3900 2.962859 ACATGAACCTTTGCCCTCTTT 58.037 42.857 0.00 0.00 0.00 2.52
2239 3901 2.629617 ACATGAACCTTTGCCCTCTTTG 59.370 45.455 0.00 0.00 0.00 2.77
2242 3904 1.412343 GAACCTTTGCCCTCTTTGCAA 59.588 47.619 0.00 0.00 46.30 4.08
2245 3907 4.274012 TTGCCCTCTTTGCAAGCA 57.726 50.000 6.24 6.24 43.36 3.91
2246 3908 2.043625 TTGCCCTCTTTGCAAGCAG 58.956 52.632 9.83 5.29 43.36 4.24
2247 3909 1.466025 TTGCCCTCTTTGCAAGCAGG 61.466 55.000 15.77 15.77 43.36 4.85
2248 3910 1.905354 GCCCTCTTTGCAAGCAGGT 60.905 57.895 19.39 0.00 0.00 4.00
2249 3911 1.466851 GCCCTCTTTGCAAGCAGGTT 61.467 55.000 19.39 0.00 0.00 3.50
2250 3912 0.600057 CCCTCTTTGCAAGCAGGTTC 59.400 55.000 19.39 0.00 0.00 3.62
2251 3913 1.321474 CCTCTTTGCAAGCAGGTTCA 58.679 50.000 14.85 0.00 0.00 3.18
2252 3914 1.682854 CCTCTTTGCAAGCAGGTTCAA 59.317 47.619 14.85 0.00 0.00 2.69
2254 3916 2.620115 CTCTTTGCAAGCAGGTTCAAGA 59.380 45.455 0.00 6.12 0.00 3.02
2255 3917 2.620115 TCTTTGCAAGCAGGTTCAAGAG 59.380 45.455 0.00 0.00 0.00 2.85
2257 3919 1.597742 TGCAAGCAGGTTCAAGAGAC 58.402 50.000 0.00 0.00 0.00 3.36
2258 3920 0.514691 GCAAGCAGGTTCAAGAGACG 59.485 55.000 0.00 0.00 0.00 4.18
2276 4678 4.475135 GCGGCCCACCTCCTCTTC 62.475 72.222 0.00 0.00 0.00 2.87
2277 4679 3.787001 CGGCCCACCTCCTCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
2278 4680 2.610859 GGCCCACCTCCTCTTCCA 60.611 66.667 0.00 0.00 0.00 3.53
2279 4681 2.231380 GGCCCACCTCCTCTTCCAA 61.231 63.158 0.00 0.00 0.00 3.53
2280 4682 1.575447 GGCCCACCTCCTCTTCCAAT 61.575 60.000 0.00 0.00 0.00 3.16
2281 4683 0.394899 GCCCACCTCCTCTTCCAATG 60.395 60.000 0.00 0.00 0.00 2.82
2282 4684 0.394899 CCCACCTCCTCTTCCAATGC 60.395 60.000 0.00 0.00 0.00 3.56
2283 4685 0.394899 CCACCTCCTCTTCCAATGCC 60.395 60.000 0.00 0.00 0.00 4.40
2284 4686 0.745845 CACCTCCTCTTCCAATGCCG 60.746 60.000 0.00 0.00 0.00 5.69
2285 4687 1.153086 CCTCCTCTTCCAATGCCGG 60.153 63.158 0.00 0.00 0.00 6.13
2286 4688 1.604378 CTCCTCTTCCAATGCCGGT 59.396 57.895 1.90 0.00 0.00 5.28
2287 4689 0.035056 CTCCTCTTCCAATGCCGGTT 60.035 55.000 1.90 0.00 0.00 4.44
2288 4690 0.035439 TCCTCTTCCAATGCCGGTTC 60.035 55.000 1.90 0.00 0.00 3.62
2289 4691 0.322456 CCTCTTCCAATGCCGGTTCA 60.322 55.000 1.90 0.00 0.00 3.18
2290 4692 1.533625 CTCTTCCAATGCCGGTTCAA 58.466 50.000 1.90 0.00 0.00 2.69
2291 4693 1.885887 CTCTTCCAATGCCGGTTCAAA 59.114 47.619 1.90 0.00 0.00 2.69
2292 4694 1.885887 TCTTCCAATGCCGGTTCAAAG 59.114 47.619 1.90 0.18 0.00 2.77
2293 4695 1.613437 CTTCCAATGCCGGTTCAAAGT 59.387 47.619 1.90 0.00 0.00 2.66
2294 4696 0.958091 TCCAATGCCGGTTCAAAGTG 59.042 50.000 1.90 0.00 0.00 3.16
2295 4697 0.958091 CCAATGCCGGTTCAAAGTGA 59.042 50.000 1.90 0.00 0.00 3.41
2296 4698 1.068333 CCAATGCCGGTTCAAAGTGAG 60.068 52.381 1.90 0.00 0.00 3.51
2297 4699 1.879380 CAATGCCGGTTCAAAGTGAGA 59.121 47.619 1.90 0.00 0.00 3.27
2298 4700 1.813513 ATGCCGGTTCAAAGTGAGAG 58.186 50.000 1.90 0.00 0.00 3.20
2299 4701 0.468226 TGCCGGTTCAAAGTGAGAGT 59.532 50.000 1.90 0.00 0.00 3.24
2300 4702 0.868406 GCCGGTTCAAAGTGAGAGTG 59.132 55.000 1.90 0.00 0.00 3.51
2301 4703 1.810412 GCCGGTTCAAAGTGAGAGTGT 60.810 52.381 1.90 0.00 0.00 3.55
2302 4704 1.867233 CCGGTTCAAAGTGAGAGTGTG 59.133 52.381 0.00 0.00 0.00 3.82
2303 4705 1.867233 CGGTTCAAAGTGAGAGTGTGG 59.133 52.381 0.00 0.00 0.00 4.17
2304 4706 2.483013 CGGTTCAAAGTGAGAGTGTGGA 60.483 50.000 0.00 0.00 0.00 4.02
2305 4707 2.872858 GGTTCAAAGTGAGAGTGTGGAC 59.127 50.000 0.00 0.00 0.00 4.02
2306 4708 2.509052 TCAAAGTGAGAGTGTGGACG 57.491 50.000 0.00 0.00 0.00 4.79
2307 4709 1.068588 TCAAAGTGAGAGTGTGGACGG 59.931 52.381 0.00 0.00 0.00 4.79
2308 4710 1.068588 CAAAGTGAGAGTGTGGACGGA 59.931 52.381 0.00 0.00 0.00 4.69
2309 4711 0.962489 AAGTGAGAGTGTGGACGGAG 59.038 55.000 0.00 0.00 0.00 4.63
2310 4712 0.110678 AGTGAGAGTGTGGACGGAGA 59.889 55.000 0.00 0.00 0.00 3.71
2311 4713 1.178276 GTGAGAGTGTGGACGGAGAT 58.822 55.000 0.00 0.00 0.00 2.75
2312 4714 1.546476 GTGAGAGTGTGGACGGAGATT 59.454 52.381 0.00 0.00 0.00 2.40
2313 4715 2.753452 GTGAGAGTGTGGACGGAGATTA 59.247 50.000 0.00 0.00 0.00 1.75
2314 4716 3.192844 GTGAGAGTGTGGACGGAGATTAA 59.807 47.826 0.00 0.00 0.00 1.40
2315 4717 3.444034 TGAGAGTGTGGACGGAGATTAAG 59.556 47.826 0.00 0.00 0.00 1.85
2316 4718 3.695060 GAGAGTGTGGACGGAGATTAAGA 59.305 47.826 0.00 0.00 0.00 2.10
2317 4719 3.697045 AGAGTGTGGACGGAGATTAAGAG 59.303 47.826 0.00 0.00 0.00 2.85
2318 4720 3.432378 AGTGTGGACGGAGATTAAGAGT 58.568 45.455 0.00 0.00 0.00 3.24
2319 4721 3.833070 AGTGTGGACGGAGATTAAGAGTT 59.167 43.478 0.00 0.00 0.00 3.01
2320 4722 4.082136 AGTGTGGACGGAGATTAAGAGTTC 60.082 45.833 0.00 0.00 0.00 3.01
2321 4723 3.119602 TGTGGACGGAGATTAAGAGTTCG 60.120 47.826 0.00 0.00 0.00 3.95
2322 4724 2.159282 TGGACGGAGATTAAGAGTTCGC 60.159 50.000 0.00 0.00 0.00 4.70
2323 4725 2.099427 GGACGGAGATTAAGAGTTCGCT 59.901 50.000 0.00 0.00 0.00 4.93
2324 4726 3.429135 GGACGGAGATTAAGAGTTCGCTT 60.429 47.826 0.00 0.00 0.00 4.68
2325 4727 3.512680 ACGGAGATTAAGAGTTCGCTTG 58.487 45.455 0.00 0.00 0.00 4.01
2326 4728 2.860735 CGGAGATTAAGAGTTCGCTTGG 59.139 50.000 0.00 0.00 0.00 3.61
2327 4729 3.676324 CGGAGATTAAGAGTTCGCTTGGT 60.676 47.826 0.00 0.00 0.00 3.67
2328 4730 4.254492 GGAGATTAAGAGTTCGCTTGGTT 58.746 43.478 0.00 0.00 0.00 3.67
2329 4731 4.695928 GGAGATTAAGAGTTCGCTTGGTTT 59.304 41.667 0.00 0.00 0.00 3.27
2330 4732 5.181433 GGAGATTAAGAGTTCGCTTGGTTTT 59.819 40.000 0.00 0.00 0.00 2.43
2331 4733 6.242508 AGATTAAGAGTTCGCTTGGTTTTC 57.757 37.500 0.00 0.00 0.00 2.29
2332 4734 5.763204 AGATTAAGAGTTCGCTTGGTTTTCA 59.237 36.000 0.00 0.00 0.00 2.69
2333 4735 3.692791 AAGAGTTCGCTTGGTTTTCAC 57.307 42.857 0.00 0.00 0.00 3.18
2334 4736 1.597663 AGAGTTCGCTTGGTTTTCACG 59.402 47.619 0.00 0.00 0.00 4.35
2335 4737 1.595794 GAGTTCGCTTGGTTTTCACGA 59.404 47.619 0.00 0.00 0.00 4.35
2336 4738 1.329599 AGTTCGCTTGGTTTTCACGAC 59.670 47.619 0.00 0.00 31.61 4.34
2337 4739 1.062880 GTTCGCTTGGTTTTCACGACA 59.937 47.619 0.00 0.00 31.61 4.35
2338 4740 1.588674 TCGCTTGGTTTTCACGACAT 58.411 45.000 0.00 0.00 0.00 3.06
2339 4741 1.529438 TCGCTTGGTTTTCACGACATC 59.471 47.619 0.00 0.00 0.00 3.06
2340 4742 1.721489 CGCTTGGTTTTCACGACATCG 60.721 52.381 0.00 0.00 46.33 3.84
2341 4743 1.529438 GCTTGGTTTTCACGACATCGA 59.471 47.619 8.54 0.00 43.02 3.59
2342 4744 2.661979 GCTTGGTTTTCACGACATCGAC 60.662 50.000 8.54 0.00 43.02 4.20
2343 4745 1.504359 TGGTTTTCACGACATCGACC 58.496 50.000 8.54 5.27 43.02 4.79
2344 4746 0.794473 GGTTTTCACGACATCGACCC 59.206 55.000 8.54 0.00 43.02 4.46
2345 4747 0.437295 GTTTTCACGACATCGACCCG 59.563 55.000 8.54 0.00 43.02 5.28
2346 4748 0.314618 TTTTCACGACATCGACCCGA 59.685 50.000 8.54 0.00 43.02 5.14
2347 4749 0.387622 TTTCACGACATCGACCCGAC 60.388 55.000 8.54 0.00 43.02 4.79
2348 4750 1.517210 TTCACGACATCGACCCGACA 61.517 55.000 8.54 0.00 43.02 4.35
2349 4751 1.514228 CACGACATCGACCCGACAG 60.514 63.158 8.54 0.00 43.02 3.51
2350 4752 1.673337 ACGACATCGACCCGACAGA 60.673 57.895 8.54 0.00 43.02 3.41
2351 4753 1.030488 ACGACATCGACCCGACAGAT 61.030 55.000 8.54 0.00 43.02 2.90
2352 4754 0.100682 CGACATCGACCCGACAGATT 59.899 55.000 0.00 0.00 43.02 2.40
2353 4755 1.560923 GACATCGACCCGACAGATTG 58.439 55.000 0.00 0.00 39.18 2.67
2354 4756 0.175760 ACATCGACCCGACAGATTGG 59.824 55.000 0.00 0.00 39.18 3.16
2355 4757 0.459899 CATCGACCCGACAGATTGGA 59.540 55.000 0.00 0.00 39.18 3.53
2356 4758 0.460311 ATCGACCCGACAGATTGGAC 59.540 55.000 0.00 0.00 39.18 4.02
2357 4759 0.896479 TCGACCCGACAGATTGGACA 60.896 55.000 0.00 0.00 0.00 4.02
2358 4760 0.736325 CGACCCGACAGATTGGACAC 60.736 60.000 0.00 0.00 0.00 3.67
2359 4761 0.608640 GACCCGACAGATTGGACACT 59.391 55.000 0.00 0.00 0.00 3.55
2360 4762 1.002087 GACCCGACAGATTGGACACTT 59.998 52.381 0.00 0.00 0.00 3.16
2361 4763 1.270839 ACCCGACAGATTGGACACTTG 60.271 52.381 0.00 0.00 0.00 3.16
2362 4764 1.270839 CCCGACAGATTGGACACTTGT 60.271 52.381 0.00 0.00 0.00 3.16
2363 4765 1.800586 CCGACAGATTGGACACTTGTG 59.199 52.381 0.00 0.00 0.00 3.33
2364 4766 1.195448 CGACAGATTGGACACTTGTGC 59.805 52.381 0.10 0.00 36.87 4.57
2365 4767 1.537202 GACAGATTGGACACTTGTGCC 59.463 52.381 0.10 4.31 35.36 5.01
2366 4768 0.883833 CAGATTGGACACTTGTGCCC 59.116 55.000 0.00 0.00 35.36 5.36
2367 4769 0.773644 AGATTGGACACTTGTGCCCT 59.226 50.000 7.56 0.00 35.36 5.19
2368 4770 1.168714 GATTGGACACTTGTGCCCTC 58.831 55.000 7.56 3.94 35.36 4.30
2369 4771 0.606401 ATTGGACACTTGTGCCCTCG 60.606 55.000 7.56 0.00 35.36 4.63
2370 4772 2.358737 GGACACTTGTGCCCTCGG 60.359 66.667 0.10 0.00 0.00 4.63
2371 4773 2.426023 GACACTTGTGCCCTCGGT 59.574 61.111 0.10 0.00 0.00 4.69
2372 4774 1.961277 GACACTTGTGCCCTCGGTG 60.961 63.158 0.10 0.00 0.00 4.94
2373 4775 2.377628 GACACTTGTGCCCTCGGTGA 62.378 60.000 0.10 0.00 0.00 4.02
2374 4776 1.669115 CACTTGTGCCCTCGGTGAG 60.669 63.158 0.00 0.00 0.00 3.51
2375 4777 1.837051 ACTTGTGCCCTCGGTGAGA 60.837 57.895 0.00 0.00 0.00 3.27
2376 4778 1.079543 CTTGTGCCCTCGGTGAGAG 60.080 63.158 0.00 0.00 46.44 3.20
2377 4779 1.821061 CTTGTGCCCTCGGTGAGAGT 61.821 60.000 0.00 0.00 45.44 3.24
2378 4780 1.407656 TTGTGCCCTCGGTGAGAGTT 61.408 55.000 0.00 0.00 45.44 3.01
2379 4781 1.371558 GTGCCCTCGGTGAGAGTTT 59.628 57.895 0.00 0.00 45.44 2.66
2380 4782 0.951040 GTGCCCTCGGTGAGAGTTTG 60.951 60.000 0.00 0.00 45.44 2.93
2381 4783 1.376037 GCCCTCGGTGAGAGTTTGG 60.376 63.158 0.00 0.00 45.44 3.28
2382 4784 2.058675 CCCTCGGTGAGAGTTTGGT 58.941 57.895 0.00 0.00 45.44 3.67
2383 4785 0.320771 CCCTCGGTGAGAGTTTGGTG 60.321 60.000 0.00 0.00 45.44 4.17
2384 4786 0.320771 CCTCGGTGAGAGTTTGGTGG 60.321 60.000 0.00 0.00 45.44 4.61
2385 4787 0.320771 CTCGGTGAGAGTTTGGTGGG 60.321 60.000 0.00 0.00 41.99 4.61
2386 4788 0.761323 TCGGTGAGAGTTTGGTGGGA 60.761 55.000 0.00 0.00 0.00 4.37
2387 4789 0.602905 CGGTGAGAGTTTGGTGGGAC 60.603 60.000 0.00 0.00 0.00 4.46
2388 4790 0.602905 GGTGAGAGTTTGGTGGGACG 60.603 60.000 0.00 0.00 0.00 4.79
2389 4791 0.391597 GTGAGAGTTTGGTGGGACGA 59.608 55.000 0.00 0.00 0.00 4.20
2390 4792 0.679505 TGAGAGTTTGGTGGGACGAG 59.320 55.000 0.00 0.00 0.00 4.18
2391 4793 0.037232 GAGAGTTTGGTGGGACGAGG 60.037 60.000 0.00 0.00 0.00 4.63
2392 4794 0.763223 AGAGTTTGGTGGGACGAGGT 60.763 55.000 0.00 0.00 0.00 3.85
2393 4795 0.108019 GAGTTTGGTGGGACGAGGTT 59.892 55.000 0.00 0.00 0.00 3.50
2394 4796 0.549469 AGTTTGGTGGGACGAGGTTT 59.451 50.000 0.00 0.00 0.00 3.27
2395 4797 0.666374 GTTTGGTGGGACGAGGTTTG 59.334 55.000 0.00 0.00 0.00 2.93
2396 4798 0.256464 TTTGGTGGGACGAGGTTTGT 59.744 50.000 0.00 0.00 0.00 2.83
2397 4799 0.179040 TTGGTGGGACGAGGTTTGTC 60.179 55.000 0.00 0.00 35.60 3.18
2398 4800 1.338890 TGGTGGGACGAGGTTTGTCA 61.339 55.000 0.00 0.00 38.10 3.58
2399 4801 0.883370 GGTGGGACGAGGTTTGTCAC 60.883 60.000 0.00 0.00 40.23 3.67
2400 4802 0.179067 GTGGGACGAGGTTTGTCACA 60.179 55.000 0.00 0.00 46.95 3.58
2401 4803 0.542333 TGGGACGAGGTTTGTCACAA 59.458 50.000 0.00 0.00 46.19 3.33
2402 4804 1.226746 GGGACGAGGTTTGTCACAAG 58.773 55.000 0.00 0.00 39.58 3.16
2403 4805 1.202604 GGGACGAGGTTTGTCACAAGA 60.203 52.381 0.00 0.00 39.58 3.02
2404 4806 2.135933 GGACGAGGTTTGTCACAAGAG 58.864 52.381 0.00 0.00 38.10 2.85
2405 4807 2.135933 GACGAGGTTTGTCACAAGAGG 58.864 52.381 0.00 0.00 36.37 3.69
2406 4808 1.202651 ACGAGGTTTGTCACAAGAGGG 60.203 52.381 0.00 0.00 0.00 4.30
2407 4809 1.878102 CGAGGTTTGTCACAAGAGGGG 60.878 57.143 0.00 0.00 0.00 4.79
2408 4810 1.143073 GAGGTTTGTCACAAGAGGGGT 59.857 52.381 0.00 0.00 0.00 4.95
2409 4811 1.133792 AGGTTTGTCACAAGAGGGGTG 60.134 52.381 0.00 0.00 37.60 4.61
2410 4812 0.668535 GTTTGTCACAAGAGGGGTGC 59.331 55.000 0.00 0.00 36.22 5.01
2411 4813 0.467290 TTTGTCACAAGAGGGGTGCC 60.467 55.000 0.00 0.00 36.22 5.01
2412 4814 1.352622 TTGTCACAAGAGGGGTGCCT 61.353 55.000 0.00 0.00 36.22 4.75
2413 4815 1.003233 GTCACAAGAGGGGTGCCTC 60.003 63.158 0.00 0.00 36.22 4.70
2414 4816 2.046892 CACAAGAGGGGTGCCTCG 60.047 66.667 0.00 0.00 41.31 4.63
2415 4817 4.021925 ACAAGAGGGGTGCCTCGC 62.022 66.667 0.00 0.00 41.31 5.03
2427 4829 4.492160 CCTCGCGCAAGGCTCGTA 62.492 66.667 0.00 0.00 37.99 3.43
2428 4830 2.506217 CTCGCGCAAGGCTCGTAA 60.506 61.111 8.75 0.00 37.99 3.18
2429 4831 2.789203 CTCGCGCAAGGCTCGTAAC 61.789 63.158 8.75 0.00 37.99 2.50
2430 4832 3.109547 CGCGCAAGGCTCGTAACA 61.110 61.111 8.75 0.00 40.44 2.41
2431 4833 2.474712 GCGCAAGGCTCGTAACAC 59.525 61.111 0.30 0.00 39.11 3.32
2432 4834 3.023591 GCGCAAGGCTCGTAACACC 62.024 63.158 0.30 0.00 39.11 4.16
2433 4835 1.374252 CGCAAGGCTCGTAACACCT 60.374 57.895 0.00 0.00 34.45 4.00
2434 4836 0.949105 CGCAAGGCTCGTAACACCTT 60.949 55.000 0.00 0.00 44.66 3.50
2438 4840 2.386661 AGGCTCGTAACACCTTGATG 57.613 50.000 0.00 0.00 0.00 3.07
2439 4841 1.899814 AGGCTCGTAACACCTTGATGA 59.100 47.619 0.00 0.00 0.00 2.92
2440 4842 2.501723 AGGCTCGTAACACCTTGATGAT 59.498 45.455 0.00 0.00 0.00 2.45
2441 4843 2.609459 GGCTCGTAACACCTTGATGATG 59.391 50.000 0.00 0.00 0.00 3.07
2442 4844 2.030946 GCTCGTAACACCTTGATGATGC 59.969 50.000 0.00 0.00 0.00 3.91
2443 4845 3.525537 CTCGTAACACCTTGATGATGCT 58.474 45.455 0.00 0.00 0.00 3.79
2444 4846 3.935203 CTCGTAACACCTTGATGATGCTT 59.065 43.478 0.00 0.00 0.00 3.91
2445 4847 3.684305 TCGTAACACCTTGATGATGCTTG 59.316 43.478 0.00 0.00 0.00 4.01
2446 4848 3.436704 CGTAACACCTTGATGATGCTTGT 59.563 43.478 0.00 0.00 0.00 3.16
2447 4849 4.083324 CGTAACACCTTGATGATGCTTGTT 60.083 41.667 0.00 0.00 0.00 2.83
2448 4850 3.928727 ACACCTTGATGATGCTTGTTG 57.071 42.857 0.00 0.00 0.00 3.33
2449 4851 2.029649 ACACCTTGATGATGCTTGTTGC 60.030 45.455 0.00 0.00 43.25 4.17
2450 4852 1.200716 ACCTTGATGATGCTTGTTGCG 59.799 47.619 0.00 0.00 46.63 4.85
2451 4853 1.200716 CCTTGATGATGCTTGTTGCGT 59.799 47.619 0.00 0.00 46.63 5.24
2452 4854 2.247637 CTTGATGATGCTTGTTGCGTG 58.752 47.619 0.00 0.00 46.63 5.34
2453 4855 0.522626 TGATGATGCTTGTTGCGTGG 59.477 50.000 0.00 0.00 46.63 4.94
2454 4856 0.179156 GATGATGCTTGTTGCGTGGG 60.179 55.000 0.00 0.00 46.63 4.61
2455 4857 0.608856 ATGATGCTTGTTGCGTGGGA 60.609 50.000 0.00 0.00 46.63 4.37
2456 4858 0.821301 TGATGCTTGTTGCGTGGGAA 60.821 50.000 0.00 0.00 46.63 3.97
2457 4859 0.313672 GATGCTTGTTGCGTGGGAAA 59.686 50.000 0.00 0.00 46.63 3.13
2458 4860 0.968405 ATGCTTGTTGCGTGGGAAAT 59.032 45.000 0.00 0.00 46.63 2.17
2459 4861 0.313672 TGCTTGTTGCGTGGGAAATC 59.686 50.000 0.00 0.00 46.63 2.17
2460 4862 0.598065 GCTTGTTGCGTGGGAAATCT 59.402 50.000 0.00 0.00 0.00 2.40
2461 4863 1.666888 GCTTGTTGCGTGGGAAATCTG 60.667 52.381 0.00 0.00 0.00 2.90
2462 4864 0.958091 TTGTTGCGTGGGAAATCTGG 59.042 50.000 0.00 0.00 0.00 3.86
2463 4865 0.109532 TGTTGCGTGGGAAATCTGGA 59.890 50.000 0.00 0.00 0.00 3.86
2464 4866 1.243902 GTTGCGTGGGAAATCTGGAA 58.756 50.000 0.00 0.00 0.00 3.53
2465 4867 1.068541 GTTGCGTGGGAAATCTGGAAC 60.069 52.381 0.00 0.00 0.00 3.62
2466 4868 0.953471 TGCGTGGGAAATCTGGAACG 60.953 55.000 0.00 0.00 0.00 3.95
2475 4877 1.626654 AATCTGGAACGAGCGCAACG 61.627 55.000 21.44 21.44 0.00 4.10
2480 4882 3.000080 GAACGAGCGCAACGTGAGG 62.000 63.158 27.04 4.61 43.16 3.86
2481 4883 3.493830 AACGAGCGCAACGTGAGGA 62.494 57.895 27.04 0.00 43.16 3.71
2482 4884 2.507102 CGAGCGCAACGTGAGGAT 60.507 61.111 11.47 0.00 0.00 3.24
2483 4885 2.508891 CGAGCGCAACGTGAGGATC 61.509 63.158 11.47 0.00 0.00 3.36
2485 4887 0.737715 GAGCGCAACGTGAGGATCTT 60.738 55.000 11.47 0.00 34.92 2.40
2488 4890 1.413767 CGCAACGTGAGGATCTTCCG 61.414 60.000 12.07 12.07 42.75 4.30
2489 4891 1.696832 GCAACGTGAGGATCTTCCGC 61.697 60.000 13.12 2.17 42.75 5.54
2490 4892 0.389817 CAACGTGAGGATCTTCCGCA 60.390 55.000 13.12 0.00 44.14 5.69
2494 4896 3.532896 TGAGGATCTTCCGCAACAC 57.467 52.632 1.90 0.00 43.39 3.32
2495 4897 0.036388 TGAGGATCTTCCGCAACACC 60.036 55.000 1.90 0.00 43.39 4.16
2496 4898 1.079127 AGGATCTTCCGCAACACCG 60.079 57.895 0.00 0.00 42.75 4.94
2497 4899 2.750888 GGATCTTCCGCAACACCGC 61.751 63.158 0.00 0.00 0.00 5.68
2498 4900 2.746277 ATCTTCCGCAACACCGCC 60.746 61.111 0.00 0.00 0.00 6.13
2517 4919 3.066190 CCCCTGCTACCGTCGTCA 61.066 66.667 0.00 0.00 0.00 4.35
2518 4920 2.423898 CCCCTGCTACCGTCGTCAT 61.424 63.158 0.00 0.00 0.00 3.06
2519 4921 1.065928 CCCTGCTACCGTCGTCATC 59.934 63.158 0.00 0.00 0.00 2.92
2520 4922 1.298413 CCTGCTACCGTCGTCATCG 60.298 63.158 0.00 0.00 38.55 3.84
2521 4923 1.939785 CTGCTACCGTCGTCATCGC 60.940 63.158 0.00 0.00 36.96 4.58
2522 4924 2.654404 GCTACCGTCGTCATCGCC 60.654 66.667 0.00 0.00 36.96 5.54
2523 4925 2.795973 CTACCGTCGTCATCGCCA 59.204 61.111 0.00 0.00 36.96 5.69
2524 4926 1.138036 CTACCGTCGTCATCGCCAA 59.862 57.895 0.00 0.00 36.96 4.52
2525 4927 0.457166 CTACCGTCGTCATCGCCAAA 60.457 55.000 0.00 0.00 36.96 3.28
2526 4928 0.038435 TACCGTCGTCATCGCCAAAA 60.038 50.000 0.00 0.00 36.96 2.44
2527 4929 0.672401 ACCGTCGTCATCGCCAAAAT 60.672 50.000 0.00 0.00 36.96 1.82
2529 4931 1.661617 CCGTCGTCATCGCCAAAATTA 59.338 47.619 0.00 0.00 36.96 1.40
2530 4932 2.094575 CCGTCGTCATCGCCAAAATTAA 59.905 45.455 0.00 0.00 36.96 1.40
2531 4933 3.342269 CGTCGTCATCGCCAAAATTAAG 58.658 45.455 0.00 0.00 36.96 1.85
2532 4934 3.680789 GTCGTCATCGCCAAAATTAAGG 58.319 45.455 0.00 0.00 36.96 2.69
2533 4935 3.372822 GTCGTCATCGCCAAAATTAAGGA 59.627 43.478 0.48 0.00 36.96 3.36
2534 4936 4.035208 GTCGTCATCGCCAAAATTAAGGAT 59.965 41.667 0.48 0.00 36.96 3.24
2535 4937 4.035091 TCGTCATCGCCAAAATTAAGGATG 59.965 41.667 0.48 0.00 36.96 3.51
2536 4938 4.035091 CGTCATCGCCAAAATTAAGGATGA 59.965 41.667 0.48 0.00 38.26 2.92
2537 4939 5.448496 CGTCATCGCCAAAATTAAGGATGAA 60.448 40.000 3.38 0.00 41.11 2.57
2538 4940 5.973565 GTCATCGCCAAAATTAAGGATGAAG 59.026 40.000 3.38 1.06 41.11 3.02
2540 4942 3.130340 TCGCCAAAATTAAGGATGAAGCC 59.870 43.478 0.48 0.00 0.00 4.35
2541 4943 3.131046 CGCCAAAATTAAGGATGAAGCCT 59.869 43.478 0.48 0.00 40.93 4.58
2542 4944 4.686972 GCCAAAATTAAGGATGAAGCCTC 58.313 43.478 0.48 0.00 37.26 4.70
2543 4945 4.160252 GCCAAAATTAAGGATGAAGCCTCA 59.840 41.667 0.48 0.00 37.26 3.86
2544 4946 5.654497 CCAAAATTAAGGATGAAGCCTCAC 58.346 41.667 0.00 0.00 37.26 3.51
2545 4947 5.420104 CCAAAATTAAGGATGAAGCCTCACT 59.580 40.000 0.00 0.00 37.26 3.41
2547 4949 7.381323 CAAAATTAAGGATGAAGCCTCACTTT 58.619 34.615 0.00 0.00 39.29 2.66
2548 4950 6.521151 AATTAAGGATGAAGCCTCACTTTG 57.479 37.500 0.00 0.00 39.29 2.77
2549 4951 2.503895 AGGATGAAGCCTCACTTTGG 57.496 50.000 0.00 0.00 39.29 3.28
2550 4952 1.005215 AGGATGAAGCCTCACTTTGGG 59.995 52.381 0.00 0.00 39.29 4.12
2555 4957 2.032681 GCCTCACTTTGGGCTCGT 59.967 61.111 0.00 0.00 44.48 4.18
2556 4958 2.328099 GCCTCACTTTGGGCTCGTG 61.328 63.158 0.00 0.00 44.48 4.35
2557 4959 2.328099 CCTCACTTTGGGCTCGTGC 61.328 63.158 0.00 0.00 38.76 5.34
2558 4960 2.664851 TCACTTTGGGCTCGTGCG 60.665 61.111 3.02 0.00 40.82 5.34
2559 4961 3.726517 CACTTTGGGCTCGTGCGG 61.727 66.667 3.02 0.00 40.82 5.69
2574 4976 2.462503 GCGGGTGCGAAGTATTTGA 58.537 52.632 0.00 0.00 0.00 2.69
2575 4977 0.373716 GCGGGTGCGAAGTATTTGAG 59.626 55.000 0.00 0.00 0.00 3.02
2576 4978 1.722011 CGGGTGCGAAGTATTTGAGT 58.278 50.000 0.00 0.00 0.00 3.41
2578 4980 3.255725 CGGGTGCGAAGTATTTGAGTAA 58.744 45.455 0.00 0.00 0.00 2.24
2579 4981 3.869246 CGGGTGCGAAGTATTTGAGTAAT 59.131 43.478 0.00 0.00 0.00 1.89
2580 4982 5.045215 CGGGTGCGAAGTATTTGAGTAATA 58.955 41.667 0.00 0.00 0.00 0.98
2582 4984 6.202188 CGGGTGCGAAGTATTTGAGTAATATT 59.798 38.462 0.00 0.00 31.61 1.28
2583 4985 7.383029 CGGGTGCGAAGTATTTGAGTAATATTA 59.617 37.037 0.00 0.00 31.61 0.98
2584 4986 9.216117 GGGTGCGAAGTATTTGAGTAATATTAT 57.784 33.333 0.00 0.00 31.61 1.28
2586 4988 9.530129 GTGCGAAGTATTTGAGTAATATTATGC 57.470 33.333 0.00 0.00 31.61 3.14
2591 4993 9.772973 AAGTATTTGAGTAATATTATGCCACGA 57.227 29.630 0.00 0.00 31.61 4.35
2592 4994 9.424319 AGTATTTGAGTAATATTATGCCACGAG 57.576 33.333 0.00 0.00 31.61 4.18
2593 4995 9.419297 GTATTTGAGTAATATTATGCCACGAGA 57.581 33.333 0.00 0.00 31.61 4.04
2611 5013 3.181774 CGAGAGTAATTTGTAATCGCCCG 59.818 47.826 0.00 0.00 0.00 6.13
2612 5014 2.870411 AGAGTAATTTGTAATCGCCCGC 59.130 45.455 0.00 0.00 0.00 6.13
2613 5015 2.870411 GAGTAATTTGTAATCGCCCGCT 59.130 45.455 0.00 0.00 0.00 5.52
2614 5016 3.275999 AGTAATTTGTAATCGCCCGCTT 58.724 40.909 0.00 0.00 0.00 4.68
2615 5017 2.559998 AATTTGTAATCGCCCGCTTG 57.440 45.000 0.00 0.00 0.00 4.01
2616 5018 0.738389 ATTTGTAATCGCCCGCTTGG 59.262 50.000 0.00 0.00 37.09 3.61
2633 5035 0.535335 TGGCGGAACCATGTCTACTC 59.465 55.000 0.00 0.00 46.36 2.59
2634 5036 0.179081 GGCGGAACCATGTCTACTCC 60.179 60.000 0.00 0.00 38.86 3.85
2635 5037 0.824759 GCGGAACCATGTCTACTCCT 59.175 55.000 0.00 0.00 0.00 3.69
2636 5038 1.202428 GCGGAACCATGTCTACTCCTC 60.202 57.143 0.00 0.00 0.00 3.71
2637 5039 2.379972 CGGAACCATGTCTACTCCTCT 58.620 52.381 0.00 0.00 0.00 3.69
2640 5042 4.027437 GGAACCATGTCTACTCCTCTTCT 58.973 47.826 0.00 0.00 0.00 2.85
2641 5043 4.468153 GGAACCATGTCTACTCCTCTTCTT 59.532 45.833 0.00 0.00 0.00 2.52
2643 5045 6.154706 GGAACCATGTCTACTCCTCTTCTTAA 59.845 42.308 0.00 0.00 0.00 1.85
2644 5046 7.147637 GGAACCATGTCTACTCCTCTTCTTAAT 60.148 40.741 0.00 0.00 0.00 1.40
2645 5047 7.741554 ACCATGTCTACTCCTCTTCTTAATT 57.258 36.000 0.00 0.00 0.00 1.40
2646 5048 8.840200 ACCATGTCTACTCCTCTTCTTAATTA 57.160 34.615 0.00 0.00 0.00 1.40
2670 5072 9.558396 TTAATGAAAATGACAAATCTTTTGCCT 57.442 25.926 0.06 0.00 33.65 4.75
2671 5073 8.454570 AATGAAAATGACAAATCTTTTGCCTT 57.545 26.923 0.06 0.00 33.65 4.35
2672 5074 7.249186 TGAAAATGACAAATCTTTTGCCTTG 57.751 32.000 0.06 0.00 33.65 3.61
2673 5075 6.822676 TGAAAATGACAAATCTTTTGCCTTGT 59.177 30.769 0.06 0.00 33.65 3.16
2674 5076 7.336427 TGAAAATGACAAATCTTTTGCCTTGTT 59.664 29.630 0.06 0.00 33.65 2.83
2675 5077 7.628769 AAATGACAAATCTTTTGCCTTGTTT 57.371 28.000 0.06 0.00 32.49 2.83
2676 5078 6.849588 ATGACAAATCTTTTGCCTTGTTTC 57.150 33.333 0.06 0.00 32.31 2.78
2677 5079 5.728471 TGACAAATCTTTTGCCTTGTTTCA 58.272 33.333 0.06 0.00 32.31 2.69
2678 5080 6.169094 TGACAAATCTTTTGCCTTGTTTCAA 58.831 32.000 0.06 0.00 32.31 2.69
2679 5081 6.652481 TGACAAATCTTTTGCCTTGTTTCAAA 59.348 30.769 0.06 0.00 32.31 2.69
2715 5310 1.503542 CATGCAAGCGGTGAGAACC 59.496 57.895 0.00 0.00 0.00 3.62
2716 5311 0.957395 CATGCAAGCGGTGAGAACCT 60.957 55.000 0.00 0.00 0.00 3.50
2746 5341 3.662759 AAATGTACATGGTTCGGGGAT 57.337 42.857 9.63 0.00 0.00 3.85
2750 5345 3.042682 TGTACATGGTTCGGGGATACAT 58.957 45.455 0.00 0.00 39.74 2.29
2751 5346 2.638480 ACATGGTTCGGGGATACATG 57.362 50.000 0.00 0.00 43.29 3.21
2753 5348 0.110486 ATGGTTCGGGGATACATGCC 59.890 55.000 0.00 0.00 37.59 4.40
2784 5379 5.283294 TCATGTTGTTGAACAGATGCTTTG 58.717 37.500 12.16 1.32 45.29 2.77
2804 5401 1.007038 CGTCGGACAACTTTCGGGA 60.007 57.895 9.10 0.00 0.00 5.14
2823 5420 7.605410 TCGGGAGAAAGAATAATAACAACAC 57.395 36.000 0.00 0.00 34.75 3.32
2859 5456 5.234752 AGAAAGACCCACAAACAAAAACAC 58.765 37.500 0.00 0.00 0.00 3.32
2865 5462 2.739379 CCACAAACAAAAACACCACCAC 59.261 45.455 0.00 0.00 0.00 4.16
2873 5470 4.340950 ACAAAAACACCACCACCTTCTATG 59.659 41.667 0.00 0.00 0.00 2.23
2874 5471 4.447138 AAAACACCACCACCTTCTATGA 57.553 40.909 0.00 0.00 0.00 2.15
2885 5482 5.043903 CCACCTTCTATGATGTAAGACGTG 58.956 45.833 0.00 0.00 0.00 4.49
2895 5492 6.215495 TGATGTAAGACGTGATAACCATGA 57.785 37.500 0.00 0.00 35.74 3.07
2896 5493 6.040247 TGATGTAAGACGTGATAACCATGAC 58.960 40.000 0.00 0.00 35.74 3.06
2899 5496 4.801330 AAGACGTGATAACCATGACAGA 57.199 40.909 0.00 0.00 35.74 3.41
2904 5501 3.596214 GTGATAACCATGACAGAACGGT 58.404 45.455 0.00 0.00 0.00 4.83
2977 5577 4.141620 CCACAAGTCCTAAGTGGCATCTAT 60.142 45.833 0.00 0.00 45.39 1.98
3020 5620 9.983804 GCTACAAGTTTATTAGGTTCAACATAC 57.016 33.333 0.00 0.00 0.00 2.39
3102 5702 2.224621 CCAAGAGGAAGAAGGTTGAGCA 60.225 50.000 0.00 0.00 36.89 4.26
3107 5707 1.628846 GGAAGAAGGTTGAGCAGGGTA 59.371 52.381 0.00 0.00 0.00 3.69
3116 5716 3.939592 GGTTGAGCAGGGTACTAAATCAC 59.060 47.826 0.00 0.00 0.00 3.06
3150 5750 2.804440 ACTCCCCCATCCCTAGTCTATT 59.196 50.000 0.00 0.00 0.00 1.73
3152 5752 4.617469 ACTCCCCCATCCCTAGTCTATTAT 59.383 45.833 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.279120 GATCAGCGGTCGCCTCAG 60.279 66.667 11.95 0.49 43.17 3.35
1 2 2.755876 AGATCAGCGGTCGCCTCA 60.756 61.111 11.95 0.00 43.17 3.86
11 12 1.828832 CGACGTTCTACCAGATCAGC 58.171 55.000 0.00 0.00 0.00 4.26
79 80 1.415659 CGAGATCTGGGATCAGCCTTT 59.584 52.381 0.00 0.00 40.69 3.11
175 179 2.297597 ACAGTCTCTGTAGTTCCTGTGC 59.702 50.000 0.27 0.00 43.46 4.57
242 246 1.066908 CCATGGCGTGTCACAGTTTTT 59.933 47.619 0.00 0.00 0.00 1.94
250 254 2.358615 GCTGTCCATGGCGTGTCA 60.359 61.111 6.96 4.05 0.00 3.58
256 1650 1.080298 GCTGTTTGCTGTCCATGGC 60.080 57.895 6.96 2.72 38.95 4.40
348 1745 4.778143 ATCGGCGAGTGGTTGGGC 62.778 66.667 17.22 0.00 0.00 5.36
396 1793 1.206610 TGGAGACTGATGAGCTTCTGC 59.793 52.381 0.00 0.00 40.05 4.26
440 1837 0.605319 TGCGGATCCTTTGCTTCGTT 60.605 50.000 10.75 0.00 0.00 3.85
457 1854 0.746204 GCTCCCCTGTTCTAAGCTGC 60.746 60.000 0.00 0.00 0.00 5.25
461 1858 3.181451 TGCATATGCTCCCCTGTTCTAAG 60.181 47.826 27.13 0.00 42.66 2.18
649 2256 8.619281 TGAGACCCAACTATATCTCATCTAGAT 58.381 37.037 0.00 0.00 46.95 1.98
650 2257 7.990055 TGAGACCCAACTATATCTCATCTAGA 58.010 38.462 0.00 0.00 41.99 2.43
657 2264 6.268847 AGGTGAATGAGACCCAACTATATCTC 59.731 42.308 0.00 0.00 38.46 2.75
658 2265 6.146760 AGGTGAATGAGACCCAACTATATCT 58.853 40.000 0.00 0.00 33.51 1.98
659 2266 6.426646 AGGTGAATGAGACCCAACTATATC 57.573 41.667 0.00 0.00 33.51 1.63
660 2267 6.831664 AAGGTGAATGAGACCCAACTATAT 57.168 37.500 0.00 0.00 33.51 0.86
661 2268 6.636454 AAAGGTGAATGAGACCCAACTATA 57.364 37.500 0.00 0.00 33.51 1.31
662 2269 5.520748 AAAGGTGAATGAGACCCAACTAT 57.479 39.130 0.00 0.00 33.51 2.12
663 2270 4.993705 AAAGGTGAATGAGACCCAACTA 57.006 40.909 0.00 0.00 33.51 2.24
664 2271 3.884037 AAAGGTGAATGAGACCCAACT 57.116 42.857 0.00 0.00 33.51 3.16
665 2272 6.884836 ACTATAAAAGGTGAATGAGACCCAAC 59.115 38.462 0.00 0.00 33.51 3.77
666 2273 7.027874 ACTATAAAAGGTGAATGAGACCCAA 57.972 36.000 0.00 0.00 33.51 4.12
667 2274 6.214615 TGACTATAAAAGGTGAATGAGACCCA 59.785 38.462 0.00 0.00 33.51 4.51
668 2275 6.650120 TGACTATAAAAGGTGAATGAGACCC 58.350 40.000 0.00 0.00 33.51 4.46
669 2276 8.616076 CAATGACTATAAAAGGTGAATGAGACC 58.384 37.037 0.00 0.00 0.00 3.85
670 2277 8.616076 CCAATGACTATAAAAGGTGAATGAGAC 58.384 37.037 0.00 0.00 0.00 3.36
671 2278 8.548025 TCCAATGACTATAAAAGGTGAATGAGA 58.452 33.333 0.00 0.00 0.00 3.27
672 2279 8.737168 TCCAATGACTATAAAAGGTGAATGAG 57.263 34.615 0.00 0.00 0.00 2.90
673 2280 9.123902 CATCCAATGACTATAAAAGGTGAATGA 57.876 33.333 0.00 0.00 0.00 2.57
674 2281 8.906867 ACATCCAATGACTATAAAAGGTGAATG 58.093 33.333 0.00 0.00 0.00 2.67
675 2282 8.906867 CACATCCAATGACTATAAAAGGTGAAT 58.093 33.333 0.00 0.00 0.00 2.57
676 2283 8.106462 TCACATCCAATGACTATAAAAGGTGAA 58.894 33.333 0.00 0.00 0.00 3.18
677 2284 7.629157 TCACATCCAATGACTATAAAAGGTGA 58.371 34.615 0.00 0.00 0.00 4.02
678 2285 7.864108 TCACATCCAATGACTATAAAAGGTG 57.136 36.000 0.00 0.00 0.00 4.00
679 2286 7.013655 GCATCACATCCAATGACTATAAAAGGT 59.986 37.037 0.00 0.00 0.00 3.50
680 2287 7.230108 AGCATCACATCCAATGACTATAAAAGG 59.770 37.037 0.00 0.00 0.00 3.11
681 2288 8.162878 AGCATCACATCCAATGACTATAAAAG 57.837 34.615 0.00 0.00 0.00 2.27
682 2289 9.797642 ATAGCATCACATCCAATGACTATAAAA 57.202 29.630 0.00 0.00 0.00 1.52
686 2293 8.819845 TCTTATAGCATCACATCCAATGACTAT 58.180 33.333 0.00 0.00 32.32 2.12
687 2294 8.193953 TCTTATAGCATCACATCCAATGACTA 57.806 34.615 0.00 0.00 0.00 2.59
688 2295 7.071069 TCTTATAGCATCACATCCAATGACT 57.929 36.000 0.00 0.00 0.00 3.41
689 2296 7.625817 GCATCTTATAGCATCACATCCAATGAC 60.626 40.741 0.00 0.00 0.00 3.06
690 2297 6.373495 GCATCTTATAGCATCACATCCAATGA 59.627 38.462 0.00 0.00 0.00 2.57
691 2298 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
692 2299 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
693 2300 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
694 2301 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
695 2302 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
696 2303 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
697 2304 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
698 2305 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
699 2306 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
700 2307 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
701 2308 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
702 2309 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
703 2310 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
704 2311 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
705 2312 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
706 2313 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
707 2314 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
708 2315 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
709 2316 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
710 2317 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
711 2318 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
712 2319 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
713 2320 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
714 2321 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
715 2322 1.221466 AATCCACGTCAGCACACACG 61.221 55.000 0.00 0.00 41.90 4.49
716 2323 1.790755 TAATCCACGTCAGCACACAC 58.209 50.000 0.00 0.00 0.00 3.82
717 2324 2.760634 ATAATCCACGTCAGCACACA 57.239 45.000 0.00 0.00 0.00 3.72
718 2325 2.864343 GGTATAATCCACGTCAGCACAC 59.136 50.000 0.00 0.00 0.00 3.82
719 2326 2.764010 AGGTATAATCCACGTCAGCACA 59.236 45.455 0.00 0.00 0.00 4.57
720 2327 3.123804 CAGGTATAATCCACGTCAGCAC 58.876 50.000 0.00 0.00 0.00 4.40
721 2328 2.764010 ACAGGTATAATCCACGTCAGCA 59.236 45.455 0.00 0.00 0.00 4.41
722 2329 3.454371 ACAGGTATAATCCACGTCAGC 57.546 47.619 0.00 0.00 0.00 4.26
723 2330 6.737254 AAAAACAGGTATAATCCACGTCAG 57.263 37.500 0.00 0.00 0.00 3.51
724 2331 8.795842 AATAAAAACAGGTATAATCCACGTCA 57.204 30.769 0.00 0.00 0.00 4.35
775 2382 9.099071 AGTGCCTAGAACTCATTTAGATGATAT 57.901 33.333 0.00 0.00 41.28 1.63
776 2383 8.484214 AGTGCCTAGAACTCATTTAGATGATA 57.516 34.615 0.00 0.00 41.28 2.15
777 2384 7.372260 AGTGCCTAGAACTCATTTAGATGAT 57.628 36.000 0.00 0.00 41.28 2.45
778 2385 6.183360 GGAGTGCCTAGAACTCATTTAGATGA 60.183 42.308 20.54 0.00 44.86 2.92
779 2386 5.988561 GGAGTGCCTAGAACTCATTTAGATG 59.011 44.000 20.54 0.00 44.86 2.90
780 2387 5.071115 GGGAGTGCCTAGAACTCATTTAGAT 59.929 44.000 20.54 0.00 44.86 1.98
781 2388 4.406003 GGGAGTGCCTAGAACTCATTTAGA 59.594 45.833 20.54 0.00 44.86 2.10
782 2389 4.407296 AGGGAGTGCCTAGAACTCATTTAG 59.593 45.833 20.54 0.00 44.86 1.85
783 2390 4.362677 AGGGAGTGCCTAGAACTCATTTA 58.637 43.478 20.54 0.00 44.86 1.40
784 2391 3.185455 AGGGAGTGCCTAGAACTCATTT 58.815 45.455 20.54 8.10 44.86 2.32
785 2392 2.839228 AGGGAGTGCCTAGAACTCATT 58.161 47.619 20.54 9.88 44.86 2.57
786 2393 2.559381 AGGGAGTGCCTAGAACTCAT 57.441 50.000 20.54 10.40 44.86 2.90
787 2394 3.689872 ATAGGGAGTGCCTAGAACTCA 57.310 47.619 16.26 7.02 44.86 3.41
788 2395 6.673839 ATTTATAGGGAGTGCCTAGAACTC 57.326 41.667 16.46 14.10 42.79 3.01
789 2396 8.598041 CATTATTTATAGGGAGTGCCTAGAACT 58.402 37.037 16.46 13.86 0.00 3.01
790 2397 7.824779 CCATTATTTATAGGGAGTGCCTAGAAC 59.175 40.741 16.46 0.00 0.00 3.01
791 2398 7.737607 TCCATTATTTATAGGGAGTGCCTAGAA 59.262 37.037 16.26 14.72 0.00 2.10
792 2399 7.253421 TCCATTATTTATAGGGAGTGCCTAGA 58.747 38.462 16.26 8.85 0.00 2.43
793 2400 7.400339 TCTCCATTATTTATAGGGAGTGCCTAG 59.600 40.741 16.26 0.00 44.33 3.02
794 2401 7.253421 TCTCCATTATTTATAGGGAGTGCCTA 58.747 38.462 13.42 13.42 44.33 3.93
795 2402 6.091555 TCTCCATTATTTATAGGGAGTGCCT 58.908 40.000 8.78 8.78 44.33 4.75
796 2403 6.374417 TCTCCATTATTTATAGGGAGTGCC 57.626 41.667 14.24 0.00 44.33 5.01
797 2404 6.410540 CCTCTCCATTATTTATAGGGAGTGC 58.589 44.000 14.24 0.00 44.33 4.40
798 2405 6.214412 AGCCTCTCCATTATTTATAGGGAGTG 59.786 42.308 14.24 12.61 44.33 3.51
799 2406 6.214412 CAGCCTCTCCATTATTTATAGGGAGT 59.786 42.308 14.24 0.48 44.33 3.85
800 2407 6.214412 ACAGCCTCTCCATTATTTATAGGGAG 59.786 42.308 0.00 0.00 45.15 4.30
801 2408 6.013379 CACAGCCTCTCCATTATTTATAGGGA 60.013 42.308 0.00 0.00 0.00 4.20
802 2409 6.176183 CACAGCCTCTCCATTATTTATAGGG 58.824 44.000 0.00 0.00 0.00 3.53
803 2410 6.176183 CCACAGCCTCTCCATTATTTATAGG 58.824 44.000 0.00 0.00 0.00 2.57
804 2411 6.176183 CCCACAGCCTCTCCATTATTTATAG 58.824 44.000 0.00 0.00 0.00 1.31
805 2412 5.514834 GCCCACAGCCTCTCCATTATTTATA 60.515 44.000 0.00 0.00 34.35 0.98
806 2413 4.751028 GCCCACAGCCTCTCCATTATTTAT 60.751 45.833 0.00 0.00 34.35 1.40
807 2414 3.435026 GCCCACAGCCTCTCCATTATTTA 60.435 47.826 0.00 0.00 34.35 1.40
1027 2657 2.041115 GGAAAGGGAAGCGACTGCC 61.041 63.158 0.00 0.00 44.31 4.85
1322 2952 1.726265 GCGGTAGTCCCAGTAGTCG 59.274 63.158 0.00 0.00 0.00 4.18
1567 3208 1.193426 GTTCAGAGCAGCGTCAAGAAC 59.807 52.381 11.01 11.01 31.16 3.01
1570 3211 1.621301 CGGTTCAGAGCAGCGTCAAG 61.621 60.000 0.00 0.00 0.00 3.02
1577 3218 2.661566 CGCACACGGTTCAGAGCAG 61.662 63.158 0.00 0.00 34.97 4.24
1701 3357 3.054503 ACGCCGCTCTCGTACAGT 61.055 61.111 0.00 0.00 38.52 3.55
1968 3624 4.954970 AGTTGGTGCCCGCCACTG 62.955 66.667 0.00 0.00 44.08 3.66
2047 3708 0.109827 CGCAACACGCCAATCATTCA 60.110 50.000 0.00 0.00 37.30 2.57
2048 3709 2.640684 CGCAACACGCCAATCATTC 58.359 52.632 0.00 0.00 37.30 2.67
2049 3710 4.866088 CGCAACACGCCAATCATT 57.134 50.000 0.00 0.00 37.30 2.57
2147 3808 8.552034 GCATGTTTCTTAGACTATTGTACCATC 58.448 37.037 0.00 0.00 0.00 3.51
2149 3810 7.333423 GTGCATGTTTCTTAGACTATTGTACCA 59.667 37.037 0.00 0.00 0.00 3.25
2150 3811 7.333423 TGTGCATGTTTCTTAGACTATTGTACC 59.667 37.037 0.00 0.00 0.00 3.34
2156 3817 8.177663 CGAATTTGTGCATGTTTCTTAGACTAT 58.822 33.333 0.00 0.00 0.00 2.12
2180 3841 7.062605 GTGTAACTTCGATTTCAGGTTATTCGA 59.937 37.037 0.00 0.00 37.08 3.71
2216 3878 3.806949 AGAGGGCAAAGGTTCATGTTA 57.193 42.857 0.00 0.00 0.00 2.41
2236 3898 2.358898 GTCTCTTGAACCTGCTTGCAAA 59.641 45.455 0.00 0.00 0.00 3.68
2237 3899 1.949525 GTCTCTTGAACCTGCTTGCAA 59.050 47.619 0.00 0.00 0.00 4.08
2238 3900 1.597742 GTCTCTTGAACCTGCTTGCA 58.402 50.000 0.00 0.00 0.00 4.08
2239 3901 0.514691 CGTCTCTTGAACCTGCTTGC 59.485 55.000 0.00 0.00 0.00 4.01
2242 3904 1.004440 GCCGTCTCTTGAACCTGCT 60.004 57.895 0.00 0.00 0.00 4.24
2243 3905 2.383527 CGCCGTCTCTTGAACCTGC 61.384 63.158 0.00 0.00 0.00 4.85
2244 3906 1.738099 CCGCCGTCTCTTGAACCTG 60.738 63.158 0.00 0.00 0.00 4.00
2245 3907 2.657237 CCGCCGTCTCTTGAACCT 59.343 61.111 0.00 0.00 0.00 3.50
2246 3908 3.119096 GCCGCCGTCTCTTGAACC 61.119 66.667 0.00 0.00 0.00 3.62
2247 3909 3.119096 GGCCGCCGTCTCTTGAAC 61.119 66.667 0.00 0.00 0.00 3.18
2248 3910 4.388499 GGGCCGCCGTCTCTTGAA 62.388 66.667 2.55 0.00 0.00 2.69
2266 4668 1.604378 CGGCATTGGAAGAGGAGGT 59.396 57.895 0.00 0.00 0.00 3.85
2270 4672 0.322456 TGAACCGGCATTGGAAGAGG 60.322 55.000 0.00 0.00 0.00 3.69
2272 4674 1.885887 CTTTGAACCGGCATTGGAAGA 59.114 47.619 0.00 0.00 0.00 2.87
2276 4678 0.958091 TCACTTTGAACCGGCATTGG 59.042 50.000 0.00 0.00 0.00 3.16
2277 4679 1.879380 TCTCACTTTGAACCGGCATTG 59.121 47.619 0.00 0.00 0.00 2.82
2278 4680 2.154462 CTCTCACTTTGAACCGGCATT 58.846 47.619 0.00 0.00 0.00 3.56
2279 4681 1.072331 ACTCTCACTTTGAACCGGCAT 59.928 47.619 0.00 0.00 0.00 4.40
2280 4682 0.468226 ACTCTCACTTTGAACCGGCA 59.532 50.000 0.00 0.00 0.00 5.69
2281 4683 0.868406 CACTCTCACTTTGAACCGGC 59.132 55.000 0.00 0.00 0.00 6.13
2282 4684 1.867233 CACACTCTCACTTTGAACCGG 59.133 52.381 0.00 0.00 0.00 5.28
2283 4685 1.867233 CCACACTCTCACTTTGAACCG 59.133 52.381 0.00 0.00 0.00 4.44
2284 4686 2.872858 GTCCACACTCTCACTTTGAACC 59.127 50.000 0.00 0.00 0.00 3.62
2285 4687 2.540101 CGTCCACACTCTCACTTTGAAC 59.460 50.000 0.00 0.00 0.00 3.18
2286 4688 2.483013 CCGTCCACACTCTCACTTTGAA 60.483 50.000 0.00 0.00 0.00 2.69
2287 4689 1.068588 CCGTCCACACTCTCACTTTGA 59.931 52.381 0.00 0.00 0.00 2.69
2288 4690 1.068588 TCCGTCCACACTCTCACTTTG 59.931 52.381 0.00 0.00 0.00 2.77
2289 4691 1.341531 CTCCGTCCACACTCTCACTTT 59.658 52.381 0.00 0.00 0.00 2.66
2290 4692 0.962489 CTCCGTCCACACTCTCACTT 59.038 55.000 0.00 0.00 0.00 3.16
2291 4693 0.110678 TCTCCGTCCACACTCTCACT 59.889 55.000 0.00 0.00 0.00 3.41
2292 4694 1.178276 ATCTCCGTCCACACTCTCAC 58.822 55.000 0.00 0.00 0.00 3.51
2293 4695 1.924731 AATCTCCGTCCACACTCTCA 58.075 50.000 0.00 0.00 0.00 3.27
2294 4696 3.695060 TCTTAATCTCCGTCCACACTCTC 59.305 47.826 0.00 0.00 0.00 3.20
2295 4697 3.697045 CTCTTAATCTCCGTCCACACTCT 59.303 47.826 0.00 0.00 0.00 3.24
2296 4698 3.444388 ACTCTTAATCTCCGTCCACACTC 59.556 47.826 0.00 0.00 0.00 3.51
2297 4699 3.432378 ACTCTTAATCTCCGTCCACACT 58.568 45.455 0.00 0.00 0.00 3.55
2298 4700 3.870633 ACTCTTAATCTCCGTCCACAC 57.129 47.619 0.00 0.00 0.00 3.82
2299 4701 3.119602 CGAACTCTTAATCTCCGTCCACA 60.120 47.826 0.00 0.00 0.00 4.17
2300 4702 3.436496 CGAACTCTTAATCTCCGTCCAC 58.564 50.000 0.00 0.00 0.00 4.02
2301 4703 2.159282 GCGAACTCTTAATCTCCGTCCA 60.159 50.000 0.00 0.00 0.00 4.02
2302 4704 2.099427 AGCGAACTCTTAATCTCCGTCC 59.901 50.000 0.00 0.00 0.00 4.79
2303 4705 3.423996 AGCGAACTCTTAATCTCCGTC 57.576 47.619 0.00 0.00 0.00 4.79
2304 4706 3.512680 CAAGCGAACTCTTAATCTCCGT 58.487 45.455 0.00 0.00 0.00 4.69
2305 4707 2.860735 CCAAGCGAACTCTTAATCTCCG 59.139 50.000 0.00 0.00 0.00 4.63
2306 4708 3.863041 ACCAAGCGAACTCTTAATCTCC 58.137 45.455 0.00 0.00 0.00 3.71
2307 4709 5.864628 AAACCAAGCGAACTCTTAATCTC 57.135 39.130 0.00 0.00 0.00 2.75
2308 4710 5.763204 TGAAAACCAAGCGAACTCTTAATCT 59.237 36.000 0.00 0.00 0.00 2.40
2309 4711 5.851703 GTGAAAACCAAGCGAACTCTTAATC 59.148 40.000 0.00 0.00 0.00 1.75
2310 4712 5.560183 CGTGAAAACCAAGCGAACTCTTAAT 60.560 40.000 0.00 0.00 0.00 1.40
2311 4713 4.260456 CGTGAAAACCAAGCGAACTCTTAA 60.260 41.667 0.00 0.00 0.00 1.85
2312 4714 3.246699 CGTGAAAACCAAGCGAACTCTTA 59.753 43.478 0.00 0.00 0.00 2.10
2313 4715 2.031683 CGTGAAAACCAAGCGAACTCTT 59.968 45.455 0.00 0.00 0.00 2.85
2314 4716 1.597663 CGTGAAAACCAAGCGAACTCT 59.402 47.619 0.00 0.00 0.00 3.24
2315 4717 1.595794 TCGTGAAAACCAAGCGAACTC 59.404 47.619 0.00 0.00 0.00 3.01
2316 4718 1.329599 GTCGTGAAAACCAAGCGAACT 59.670 47.619 0.00 0.00 33.30 3.01
2317 4719 1.062880 TGTCGTGAAAACCAAGCGAAC 59.937 47.619 0.00 0.00 33.30 3.95
2318 4720 1.370609 TGTCGTGAAAACCAAGCGAA 58.629 45.000 0.00 0.00 33.30 4.70
2319 4721 1.529438 GATGTCGTGAAAACCAAGCGA 59.471 47.619 0.00 0.00 0.00 4.93
2320 4722 1.721489 CGATGTCGTGAAAACCAAGCG 60.721 52.381 0.00 0.00 34.11 4.68
2321 4723 1.529438 TCGATGTCGTGAAAACCAAGC 59.471 47.619 2.04 0.00 40.80 4.01
2322 4724 2.096417 GGTCGATGTCGTGAAAACCAAG 60.096 50.000 2.04 0.00 40.80 3.61
2323 4725 1.868498 GGTCGATGTCGTGAAAACCAA 59.132 47.619 2.04 0.00 40.80 3.67
2324 4726 1.504359 GGTCGATGTCGTGAAAACCA 58.496 50.000 2.04 0.00 40.80 3.67
2325 4727 0.794473 GGGTCGATGTCGTGAAAACC 59.206 55.000 2.04 2.37 40.80 3.27
2326 4728 0.437295 CGGGTCGATGTCGTGAAAAC 59.563 55.000 2.04 0.00 40.80 2.43
2327 4729 0.314618 TCGGGTCGATGTCGTGAAAA 59.685 50.000 2.04 0.00 40.80 2.29
2328 4730 0.387622 GTCGGGTCGATGTCGTGAAA 60.388 55.000 2.04 0.00 38.42 2.69
2329 4731 1.210931 GTCGGGTCGATGTCGTGAA 59.789 57.895 2.04 0.00 38.42 3.18
2330 4732 1.918868 CTGTCGGGTCGATGTCGTGA 61.919 60.000 2.04 0.00 38.42 4.35
2331 4733 1.514228 CTGTCGGGTCGATGTCGTG 60.514 63.158 2.04 0.00 38.42 4.35
2332 4734 1.030488 ATCTGTCGGGTCGATGTCGT 61.030 55.000 2.04 0.00 38.42 4.34
2333 4735 0.100682 AATCTGTCGGGTCGATGTCG 59.899 55.000 0.00 0.00 38.42 4.35
2334 4736 1.560923 CAATCTGTCGGGTCGATGTC 58.439 55.000 0.00 0.00 38.42 3.06
2335 4737 0.175760 CCAATCTGTCGGGTCGATGT 59.824 55.000 0.00 0.00 38.42 3.06
2336 4738 0.459899 TCCAATCTGTCGGGTCGATG 59.540 55.000 0.00 0.00 38.42 3.84
2337 4739 0.460311 GTCCAATCTGTCGGGTCGAT 59.540 55.000 0.00 0.00 38.42 3.59
2338 4740 0.896479 TGTCCAATCTGTCGGGTCGA 60.896 55.000 0.00 0.00 0.00 4.20
2339 4741 0.736325 GTGTCCAATCTGTCGGGTCG 60.736 60.000 0.00 0.00 0.00 4.79
2340 4742 0.608640 AGTGTCCAATCTGTCGGGTC 59.391 55.000 0.00 0.00 0.00 4.46
2341 4743 1.056660 AAGTGTCCAATCTGTCGGGT 58.943 50.000 0.00 0.00 0.00 5.28
2342 4744 1.270839 ACAAGTGTCCAATCTGTCGGG 60.271 52.381 0.00 0.00 0.00 5.14
2343 4745 1.800586 CACAAGTGTCCAATCTGTCGG 59.199 52.381 0.00 0.00 0.00 4.79
2344 4746 1.195448 GCACAAGTGTCCAATCTGTCG 59.805 52.381 1.79 0.00 0.00 4.35
2345 4747 1.537202 GGCACAAGTGTCCAATCTGTC 59.463 52.381 1.79 0.00 0.00 3.51
2346 4748 1.609208 GGCACAAGTGTCCAATCTGT 58.391 50.000 1.79 0.00 0.00 3.41
2354 4756 1.961277 CACCGAGGGCACAAGTGTC 60.961 63.158 1.79 0.00 0.00 3.67
2355 4757 2.111043 CACCGAGGGCACAAGTGT 59.889 61.111 1.79 0.00 0.00 3.55
2356 4758 1.669115 CTCACCGAGGGCACAAGTG 60.669 63.158 0.00 0.00 0.00 3.16
2357 4759 1.821061 CTCTCACCGAGGGCACAAGT 61.821 60.000 0.00 0.00 36.06 3.16
2358 4760 1.079543 CTCTCACCGAGGGCACAAG 60.080 63.158 0.00 0.00 36.06 3.16
2359 4761 1.407656 AACTCTCACCGAGGGCACAA 61.408 55.000 0.00 0.00 44.33 3.33
2360 4762 1.407656 AAACTCTCACCGAGGGCACA 61.408 55.000 0.00 0.00 44.33 4.57
2361 4763 0.951040 CAAACTCTCACCGAGGGCAC 60.951 60.000 0.00 0.00 44.33 5.01
2362 4764 1.371183 CAAACTCTCACCGAGGGCA 59.629 57.895 0.00 0.00 44.33 5.36
2363 4765 1.376037 CCAAACTCTCACCGAGGGC 60.376 63.158 0.00 0.00 44.33 5.19
2364 4766 0.320771 CACCAAACTCTCACCGAGGG 60.321 60.000 0.00 0.00 44.33 4.30
2365 4767 0.320771 CCACCAAACTCTCACCGAGG 60.321 60.000 0.00 0.00 44.33 4.63
2366 4768 0.320771 CCCACCAAACTCTCACCGAG 60.321 60.000 0.00 0.00 45.56 4.63
2367 4769 0.761323 TCCCACCAAACTCTCACCGA 60.761 55.000 0.00 0.00 0.00 4.69
2368 4770 0.602905 GTCCCACCAAACTCTCACCG 60.603 60.000 0.00 0.00 0.00 4.94
2369 4771 0.602905 CGTCCCACCAAACTCTCACC 60.603 60.000 0.00 0.00 0.00 4.02
2370 4772 0.391597 TCGTCCCACCAAACTCTCAC 59.608 55.000 0.00 0.00 0.00 3.51
2371 4773 0.679505 CTCGTCCCACCAAACTCTCA 59.320 55.000 0.00 0.00 0.00 3.27
2372 4774 0.037232 CCTCGTCCCACCAAACTCTC 60.037 60.000 0.00 0.00 0.00 3.20
2373 4775 0.763223 ACCTCGTCCCACCAAACTCT 60.763 55.000 0.00 0.00 0.00 3.24
2374 4776 0.108019 AACCTCGTCCCACCAAACTC 59.892 55.000 0.00 0.00 0.00 3.01
2375 4777 0.549469 AAACCTCGTCCCACCAAACT 59.451 50.000 0.00 0.00 0.00 2.66
2376 4778 0.666374 CAAACCTCGTCCCACCAAAC 59.334 55.000 0.00 0.00 0.00 2.93
2377 4779 0.256464 ACAAACCTCGTCCCACCAAA 59.744 50.000 0.00 0.00 0.00 3.28
2378 4780 0.179040 GACAAACCTCGTCCCACCAA 60.179 55.000 0.00 0.00 0.00 3.67
2379 4781 1.338890 TGACAAACCTCGTCCCACCA 61.339 55.000 0.00 0.00 32.15 4.17
2380 4782 0.883370 GTGACAAACCTCGTCCCACC 60.883 60.000 0.00 0.00 32.15 4.61
2381 4783 0.179067 TGTGACAAACCTCGTCCCAC 60.179 55.000 0.00 0.00 32.15 4.61
2382 4784 0.542333 TTGTGACAAACCTCGTCCCA 59.458 50.000 0.00 0.00 32.15 4.37
2383 4785 1.202604 TCTTGTGACAAACCTCGTCCC 60.203 52.381 0.00 0.00 32.15 4.46
2384 4786 2.135933 CTCTTGTGACAAACCTCGTCC 58.864 52.381 0.00 0.00 32.15 4.79
2385 4787 2.135933 CCTCTTGTGACAAACCTCGTC 58.864 52.381 0.00 0.00 0.00 4.20
2386 4788 1.202651 CCCTCTTGTGACAAACCTCGT 60.203 52.381 0.00 0.00 0.00 4.18
2387 4789 1.512926 CCCTCTTGTGACAAACCTCG 58.487 55.000 0.00 0.00 0.00 4.63
2388 4790 1.143073 ACCCCTCTTGTGACAAACCTC 59.857 52.381 0.00 0.00 0.00 3.85
2389 4791 1.133792 CACCCCTCTTGTGACAAACCT 60.134 52.381 0.00 0.00 35.74 3.50
2390 4792 1.318576 CACCCCTCTTGTGACAAACC 58.681 55.000 0.00 0.00 35.74 3.27
2391 4793 0.668535 GCACCCCTCTTGTGACAAAC 59.331 55.000 0.00 0.00 35.74 2.93
2392 4794 0.467290 GGCACCCCTCTTGTGACAAA 60.467 55.000 0.00 0.00 41.55 2.83
2393 4795 1.150536 GGCACCCCTCTTGTGACAA 59.849 57.895 0.00 0.00 41.55 3.18
2394 4796 1.770110 AGGCACCCCTCTTGTGACA 60.770 57.895 0.00 0.00 44.47 3.58
2395 4797 3.161557 AGGCACCCCTCTTGTGAC 58.838 61.111 0.00 0.00 42.27 3.67
2414 4816 2.474712 GTGTTACGAGCCTTGCGC 59.525 61.111 0.00 0.00 37.98 6.09
2415 4817 0.949105 AAGGTGTTACGAGCCTTGCG 60.949 55.000 5.22 0.00 40.71 4.85
2416 4818 2.928416 AAGGTGTTACGAGCCTTGC 58.072 52.632 5.22 0.00 40.71 4.01
2418 4820 2.301870 TCATCAAGGTGTTACGAGCCTT 59.698 45.455 0.00 0.00 42.77 4.35
2419 4821 1.899814 TCATCAAGGTGTTACGAGCCT 59.100 47.619 0.00 0.00 0.00 4.58
2420 4822 2.380084 TCATCAAGGTGTTACGAGCC 57.620 50.000 0.00 0.00 0.00 4.70
2421 4823 2.030946 GCATCATCAAGGTGTTACGAGC 59.969 50.000 0.00 0.00 0.00 5.03
2422 4824 3.525537 AGCATCATCAAGGTGTTACGAG 58.474 45.455 0.00 0.00 0.00 4.18
2423 4825 3.610040 AGCATCATCAAGGTGTTACGA 57.390 42.857 0.00 0.00 0.00 3.43
2424 4826 3.436704 ACAAGCATCATCAAGGTGTTACG 59.563 43.478 0.00 0.00 0.00 3.18
2425 4827 5.156355 CAACAAGCATCATCAAGGTGTTAC 58.844 41.667 0.00 0.00 0.00 2.50
2426 4828 4.321156 GCAACAAGCATCATCAAGGTGTTA 60.321 41.667 0.00 0.00 44.79 2.41
2427 4829 3.553508 GCAACAAGCATCATCAAGGTGTT 60.554 43.478 0.00 0.00 44.79 3.32
2428 4830 2.029649 GCAACAAGCATCATCAAGGTGT 60.030 45.455 0.00 0.00 44.79 4.16
2429 4831 2.602878 GCAACAAGCATCATCAAGGTG 58.397 47.619 0.00 0.00 44.79 4.00
2430 4832 1.200716 CGCAACAAGCATCATCAAGGT 59.799 47.619 0.00 0.00 46.13 3.50
2431 4833 1.200716 ACGCAACAAGCATCATCAAGG 59.799 47.619 0.00 0.00 46.13 3.61
2432 4834 2.247637 CACGCAACAAGCATCATCAAG 58.752 47.619 0.00 0.00 46.13 3.02
2433 4835 1.068402 CCACGCAACAAGCATCATCAA 60.068 47.619 0.00 0.00 46.13 2.57
2434 4836 0.522626 CCACGCAACAAGCATCATCA 59.477 50.000 0.00 0.00 46.13 3.07
2435 4837 0.179156 CCCACGCAACAAGCATCATC 60.179 55.000 0.00 0.00 46.13 2.92
2436 4838 0.608856 TCCCACGCAACAAGCATCAT 60.609 50.000 0.00 0.00 46.13 2.45
2437 4839 0.821301 TTCCCACGCAACAAGCATCA 60.821 50.000 0.00 0.00 46.13 3.07
2438 4840 0.313672 TTTCCCACGCAACAAGCATC 59.686 50.000 0.00 0.00 46.13 3.91
2439 4841 0.968405 ATTTCCCACGCAACAAGCAT 59.032 45.000 0.00 0.00 46.13 3.79
2440 4842 0.313672 GATTTCCCACGCAACAAGCA 59.686 50.000 0.00 0.00 46.13 3.91
2441 4843 0.598065 AGATTTCCCACGCAACAAGC 59.402 50.000 0.00 0.00 40.87 4.01
2442 4844 1.068333 CCAGATTTCCCACGCAACAAG 60.068 52.381 0.00 0.00 0.00 3.16
2443 4845 0.958091 CCAGATTTCCCACGCAACAA 59.042 50.000 0.00 0.00 0.00 2.83
2444 4846 0.109532 TCCAGATTTCCCACGCAACA 59.890 50.000 0.00 0.00 0.00 3.33
2445 4847 1.068541 GTTCCAGATTTCCCACGCAAC 60.069 52.381 0.00 0.00 0.00 4.17
2446 4848 1.243902 GTTCCAGATTTCCCACGCAA 58.756 50.000 0.00 0.00 0.00 4.85
2447 4849 0.953471 CGTTCCAGATTTCCCACGCA 60.953 55.000 0.00 0.00 0.00 5.24
2448 4850 0.672401 TCGTTCCAGATTTCCCACGC 60.672 55.000 0.00 0.00 0.00 5.34
2449 4851 1.359848 CTCGTTCCAGATTTCCCACG 58.640 55.000 0.00 0.00 0.00 4.94
2450 4852 1.087501 GCTCGTTCCAGATTTCCCAC 58.912 55.000 0.00 0.00 0.00 4.61
2451 4853 0.391130 CGCTCGTTCCAGATTTCCCA 60.391 55.000 0.00 0.00 0.00 4.37
2452 4854 1.706287 GCGCTCGTTCCAGATTTCCC 61.706 60.000 0.00 0.00 0.00 3.97
2453 4855 1.019278 TGCGCTCGTTCCAGATTTCC 61.019 55.000 9.73 0.00 0.00 3.13
2454 4856 0.796312 TTGCGCTCGTTCCAGATTTC 59.204 50.000 9.73 0.00 0.00 2.17
2455 4857 0.517316 GTTGCGCTCGTTCCAGATTT 59.483 50.000 9.73 0.00 0.00 2.17
2456 4858 1.626654 CGTTGCGCTCGTTCCAGATT 61.627 55.000 9.73 0.00 0.00 2.40
2457 4859 2.094659 CGTTGCGCTCGTTCCAGAT 61.095 57.895 9.73 0.00 0.00 2.90
2458 4860 2.733218 CGTTGCGCTCGTTCCAGA 60.733 61.111 9.73 0.00 0.00 3.86
2459 4861 3.036084 ACGTTGCGCTCGTTCCAG 61.036 61.111 21.00 2.80 38.38 3.86
2460 4862 3.334751 CACGTTGCGCTCGTTCCA 61.335 61.111 23.23 0.00 39.55 3.53
2461 4863 3.000080 CTCACGTTGCGCTCGTTCC 62.000 63.158 23.23 0.00 39.55 3.62
2462 4864 2.465920 CTCACGTTGCGCTCGTTC 59.534 61.111 23.23 3.72 39.55 3.95
2463 4865 2.765250 ATCCTCACGTTGCGCTCGTT 62.765 55.000 23.23 10.18 39.55 3.85
2464 4866 3.282745 ATCCTCACGTTGCGCTCGT 62.283 57.895 21.00 21.00 42.33 4.18
2465 4867 2.507102 ATCCTCACGTTGCGCTCG 60.507 61.111 19.87 19.87 0.00 5.03
2466 4868 0.737715 AAGATCCTCACGTTGCGCTC 60.738 55.000 9.73 0.35 0.00 5.03
2475 4877 1.079503 GTGTTGCGGAAGATCCTCAC 58.920 55.000 0.00 0.00 29.78 3.51
2480 4882 2.750888 GGCGGTGTTGCGGAAGATC 61.751 63.158 0.00 0.00 35.06 2.75
2481 4883 2.746277 GGCGGTGTTGCGGAAGAT 60.746 61.111 0.00 0.00 35.06 2.40
2500 4902 2.351336 GATGACGACGGTAGCAGGGG 62.351 65.000 0.00 0.00 0.00 4.79
2501 4903 1.065928 GATGACGACGGTAGCAGGG 59.934 63.158 0.00 0.00 0.00 4.45
2503 4905 1.939785 GCGATGACGACGGTAGCAG 60.940 63.158 0.00 0.00 42.66 4.24
2505 4907 2.654404 GGCGATGACGACGGTAGC 60.654 66.667 0.00 0.00 42.66 3.58
2512 4914 3.601435 TCCTTAATTTTGGCGATGACGA 58.399 40.909 0.00 0.00 42.66 4.20
2513 4915 4.035091 TCATCCTTAATTTTGGCGATGACG 59.965 41.667 0.00 0.00 42.93 4.35
2514 4916 5.499139 TCATCCTTAATTTTGGCGATGAC 57.501 39.130 0.00 0.00 33.12 3.06
2517 4919 4.202151 GGCTTCATCCTTAATTTTGGCGAT 60.202 41.667 0.00 0.00 0.00 4.58
2518 4920 3.130340 GGCTTCATCCTTAATTTTGGCGA 59.870 43.478 0.00 0.00 0.00 5.54
2519 4921 3.131046 AGGCTTCATCCTTAATTTTGGCG 59.869 43.478 0.00 0.00 30.82 5.69
2520 4922 4.160252 TGAGGCTTCATCCTTAATTTTGGC 59.840 41.667 0.00 0.00 36.38 4.52
2521 4923 5.420104 AGTGAGGCTTCATCCTTAATTTTGG 59.580 40.000 0.30 0.00 36.38 3.28
2522 4924 6.521151 AGTGAGGCTTCATCCTTAATTTTG 57.479 37.500 0.30 0.00 36.38 2.44
2523 4925 7.381323 CAAAGTGAGGCTTCATCCTTAATTTT 58.619 34.615 0.30 0.00 37.74 1.82
2524 4926 6.071165 CCAAAGTGAGGCTTCATCCTTAATTT 60.071 38.462 0.30 0.00 39.52 1.82
2525 4927 5.420104 CCAAAGTGAGGCTTCATCCTTAATT 59.580 40.000 0.30 0.00 36.38 1.40
2526 4928 4.952335 CCAAAGTGAGGCTTCATCCTTAAT 59.048 41.667 0.30 0.00 36.38 1.40
2527 4929 4.335416 CCAAAGTGAGGCTTCATCCTTAA 58.665 43.478 0.30 0.00 36.38 1.85
2529 4931 2.556114 CCCAAAGTGAGGCTTCATCCTT 60.556 50.000 0.30 0.00 36.38 3.36
2530 4932 1.005215 CCCAAAGTGAGGCTTCATCCT 59.995 52.381 0.30 0.00 39.67 3.24
2531 4933 1.467920 CCCAAAGTGAGGCTTCATCC 58.532 55.000 0.30 0.00 36.17 3.51
2532 4934 0.813821 GCCCAAAGTGAGGCTTCATC 59.186 55.000 0.30 0.00 46.14 2.92
2533 4935 2.967270 GCCCAAAGTGAGGCTTCAT 58.033 52.632 0.30 0.00 46.14 2.57
2534 4936 4.500265 GCCCAAAGTGAGGCTTCA 57.500 55.556 0.00 0.00 46.14 3.02
2540 4942 2.671177 CGCACGAGCCCAAAGTGAG 61.671 63.158 0.00 0.00 38.06 3.51
2541 4943 2.664851 CGCACGAGCCCAAAGTGA 60.665 61.111 0.00 0.00 38.06 3.41
2542 4944 3.726517 CCGCACGAGCCCAAAGTG 61.727 66.667 0.00 0.00 37.52 3.16
2552 4954 2.495366 AATACTTCGCACCCGCACGA 62.495 55.000 0.00 0.00 38.40 4.35
2554 4956 0.179200 CAAATACTTCGCACCCGCAC 60.179 55.000 0.00 0.00 38.40 5.34
2555 4957 0.320858 TCAAATACTTCGCACCCGCA 60.321 50.000 0.00 0.00 38.40 5.69
2556 4958 0.373716 CTCAAATACTTCGCACCCGC 59.626 55.000 0.00 0.00 0.00 6.13
2557 4959 1.722011 ACTCAAATACTTCGCACCCG 58.278 50.000 0.00 0.00 0.00 5.28
2558 4960 7.492352 AATATTACTCAAATACTTCGCACCC 57.508 36.000 0.00 0.00 32.86 4.61
2560 4962 9.530129 GCATAATATTACTCAAATACTTCGCAC 57.470 33.333 0.00 0.00 32.86 5.34
2561 4963 8.717821 GGCATAATATTACTCAAATACTTCGCA 58.282 33.333 0.00 0.00 32.86 5.10
2565 4967 9.772973 TCGTGGCATAATATTACTCAAATACTT 57.227 29.630 0.00 0.00 32.86 2.24
2566 4968 9.424319 CTCGTGGCATAATATTACTCAAATACT 57.576 33.333 0.00 0.00 32.86 2.12
2567 4969 9.419297 TCTCGTGGCATAATATTACTCAAATAC 57.581 33.333 0.00 0.00 32.86 1.89
2569 4971 8.150945 ACTCTCGTGGCATAATATTACTCAAAT 58.849 33.333 0.00 0.00 0.00 2.32
2570 4972 7.497595 ACTCTCGTGGCATAATATTACTCAAA 58.502 34.615 0.00 0.00 0.00 2.69
2571 4973 7.050970 ACTCTCGTGGCATAATATTACTCAA 57.949 36.000 0.00 0.00 0.00 3.02
2572 4974 6.650427 ACTCTCGTGGCATAATATTACTCA 57.350 37.500 0.00 0.00 0.00 3.41
2574 4976 9.998106 AAATTACTCTCGTGGCATAATATTACT 57.002 29.630 0.00 0.00 0.00 2.24
2576 4978 9.772973 ACAAATTACTCTCGTGGCATAATATTA 57.227 29.630 0.00 0.00 0.00 0.98
2578 4980 9.772973 TTACAAATTACTCTCGTGGCATAATAT 57.227 29.630 0.00 0.00 0.00 1.28
2579 4981 9.772973 ATTACAAATTACTCTCGTGGCATAATA 57.227 29.630 0.00 0.00 0.00 0.98
2580 4982 8.677148 ATTACAAATTACTCTCGTGGCATAAT 57.323 30.769 0.00 0.00 0.00 1.28
2582 4984 6.419710 CGATTACAAATTACTCTCGTGGCATA 59.580 38.462 0.00 0.00 0.00 3.14
2583 4985 5.234329 CGATTACAAATTACTCTCGTGGCAT 59.766 40.000 0.00 0.00 0.00 4.40
2584 4986 4.565166 CGATTACAAATTACTCTCGTGGCA 59.435 41.667 0.00 0.00 0.00 4.92
2585 4987 4.550255 GCGATTACAAATTACTCTCGTGGC 60.550 45.833 0.00 0.00 0.00 5.01
2586 4988 4.025979 GGCGATTACAAATTACTCTCGTGG 60.026 45.833 0.00 0.00 0.00 4.94
2590 4992 3.059800 GCGGGCGATTACAAATTACTCTC 60.060 47.826 0.00 0.00 0.00 3.20
2591 4993 2.870411 GCGGGCGATTACAAATTACTCT 59.130 45.455 0.00 0.00 0.00 3.24
2592 4994 2.870411 AGCGGGCGATTACAAATTACTC 59.130 45.455 0.00 0.00 0.00 2.59
2593 4995 2.914059 AGCGGGCGATTACAAATTACT 58.086 42.857 0.00 0.00 0.00 2.24
2595 4997 2.356382 CCAAGCGGGCGATTACAAATTA 59.644 45.455 0.00 0.00 0.00 1.40
2597 4999 0.738389 CCAAGCGGGCGATTACAAAT 59.262 50.000 0.00 0.00 0.00 2.32
2598 5000 2.176140 CCAAGCGGGCGATTACAAA 58.824 52.632 0.00 0.00 0.00 2.83
2599 5001 3.897936 CCAAGCGGGCGATTACAA 58.102 55.556 0.00 0.00 0.00 2.41
2615 5017 0.179081 GGAGTAGACATGGTTCCGCC 60.179 60.000 0.00 0.00 37.90 6.13
2616 5018 0.824759 AGGAGTAGACATGGTTCCGC 59.175 55.000 0.00 0.00 33.16 5.54
2617 5019 2.379972 AGAGGAGTAGACATGGTTCCG 58.620 52.381 0.00 0.00 33.16 4.30
2618 5020 4.027437 AGAAGAGGAGTAGACATGGTTCC 58.973 47.826 0.00 0.00 0.00 3.62
2619 5021 5.669164 AAGAAGAGGAGTAGACATGGTTC 57.331 43.478 0.00 0.00 0.00 3.62
2620 5022 7.741554 ATTAAGAAGAGGAGTAGACATGGTT 57.258 36.000 0.00 0.00 0.00 3.67
2621 5023 7.741554 AATTAAGAAGAGGAGTAGACATGGT 57.258 36.000 0.00 0.00 0.00 3.55
2644 5046 9.558396 AGGCAAAAGATTTGTCATTTTCATTAA 57.442 25.926 9.76 0.00 0.00 1.40
2645 5047 9.558396 AAGGCAAAAGATTTGTCATTTTCATTA 57.442 25.926 9.76 0.00 0.00 1.90
2646 5048 8.347035 CAAGGCAAAAGATTTGTCATTTTCATT 58.653 29.630 9.76 0.00 0.00 2.57
2649 5051 7.250445 ACAAGGCAAAAGATTTGTCATTTTC 57.750 32.000 9.76 0.00 0.00 2.29
2651 5053 7.336427 TGAAACAAGGCAAAAGATTTGTCATTT 59.664 29.630 9.76 7.00 32.97 2.32
2652 5054 6.822676 TGAAACAAGGCAAAAGATTTGTCATT 59.177 30.769 9.76 1.99 32.97 2.57
2653 5055 6.347696 TGAAACAAGGCAAAAGATTTGTCAT 58.652 32.000 9.76 0.00 32.97 3.06
2654 5056 5.728471 TGAAACAAGGCAAAAGATTTGTCA 58.272 33.333 9.76 0.00 32.97 3.58
2655 5057 6.660887 TTGAAACAAGGCAAAAGATTTGTC 57.339 33.333 0.00 0.00 32.97 3.18
2656 5058 7.446001 TTTTGAAACAAGGCAAAAGATTTGT 57.554 28.000 4.90 0.00 38.60 2.83
2683 5085 1.927487 TGCATGGATGGCTCAACTTT 58.073 45.000 0.00 0.00 0.00 2.66
2684 5086 1.822990 CTTGCATGGATGGCTCAACTT 59.177 47.619 0.00 0.00 0.00 2.66
2685 5087 1.471119 CTTGCATGGATGGCTCAACT 58.529 50.000 0.00 0.00 0.00 3.16
2687 5089 1.659622 CGCTTGCATGGATGGCTCAA 61.660 55.000 10.01 0.00 0.00 3.02
2738 5333 0.468226 GTGAGGCATGTATCCCCGAA 59.532 55.000 0.00 0.00 0.00 4.30
2740 5335 0.180171 TTGTGAGGCATGTATCCCCG 59.820 55.000 0.00 0.00 0.00 5.73
2746 5341 3.701205 ACATGAGTTGTGAGGCATGTA 57.299 42.857 0.00 0.00 46.65 2.29
2784 5379 1.280206 CCCGAAAGTTGTCCGACGAC 61.280 60.000 10.56 10.56 39.66 4.34
2800 5397 7.372451 TGTGTTGTTATTATTCTTTCTCCCG 57.628 36.000 0.00 0.00 0.00 5.14
2801 5398 9.974980 TTTTGTGTTGTTATTATTCTTTCTCCC 57.025 29.630 0.00 0.00 0.00 4.30
2815 5412 8.795842 TTTCTACTCTTCCTTTTGTGTTGTTA 57.204 30.769 0.00 0.00 0.00 2.41
2816 5413 7.610305 TCTTTCTACTCTTCCTTTTGTGTTGTT 59.390 33.333 0.00 0.00 0.00 2.83
2820 5417 6.056236 GGTCTTTCTACTCTTCCTTTTGTGT 58.944 40.000 0.00 0.00 0.00 3.72
2821 5418 5.470437 GGGTCTTTCTACTCTTCCTTTTGTG 59.530 44.000 0.00 0.00 0.00 3.33
2822 5419 5.132144 TGGGTCTTTCTACTCTTCCTTTTGT 59.868 40.000 0.00 0.00 0.00 2.83
2823 5420 5.470437 GTGGGTCTTTCTACTCTTCCTTTTG 59.530 44.000 0.00 0.00 0.00 2.44
2859 5456 5.360591 GTCTTACATCATAGAAGGTGGTGG 58.639 45.833 0.00 0.00 31.98 4.61
2865 5462 7.595502 GGTTATCACGTCTTACATCATAGAAGG 59.404 40.741 0.00 0.00 0.00 3.46
2873 5470 6.040247 TGTCATGGTTATCACGTCTTACATC 58.960 40.000 0.00 0.00 0.00 3.06
2874 5471 5.972935 TGTCATGGTTATCACGTCTTACAT 58.027 37.500 0.00 0.00 0.00 2.29
2885 5482 4.565564 GTGTACCGTTCTGTCATGGTTATC 59.434 45.833 0.00 0.00 37.28 1.75
2904 5501 2.294791 CCCAAAATTGCTTGGTCGTGTA 59.705 45.455 7.89 0.00 43.84 2.90
3020 5620 6.748333 TTGCATCTCTCTTTGACTTATTGG 57.252 37.500 0.00 0.00 0.00 3.16
3102 5702 7.299246 AGCATTATACGTGATTTAGTACCCT 57.701 36.000 0.00 0.00 0.00 4.34
3107 5707 9.257651 GGAGTAAAGCATTATACGTGATTTAGT 57.742 33.333 12.00 12.00 41.28 2.24
3116 5716 4.345859 TGGGGGAGTAAAGCATTATACG 57.654 45.455 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.