Multiple sequence alignment - TraesCS2D01G209300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G209300 chr2D 100.000 7747 0 0 1 7747 164997844 164990098 0.000000e+00 14307.0
1 TraesCS2D01G209300 chr2D 76.675 403 78 14 7331 7724 3038516 3038911 7.880000e-50 209.0
2 TraesCS2D01G209300 chr2D 76.294 367 70 15 7358 7716 585123661 585123304 6.180000e-41 180.0
3 TraesCS2D01G209300 chr2D 84.496 129 20 0 7048 7176 375591796 375591668 2.270000e-25 128.0
4 TraesCS2D01G209300 chr2D 82.432 74 12 1 7664 7736 523024191 523024118 6.490000e-06 63.9
5 TraesCS2D01G209300 chr2D 97.059 34 1 0 1 34 516362011 516362044 3.020000e-04 58.4
6 TraesCS2D01G209300 chr2D 96.970 33 1 0 7712 7744 61301990 61301958 1.000000e-03 56.5
7 TraesCS2D01G209300 chr2D 92.500 40 1 1 6745 6784 249890193 249890156 1.000000e-03 56.5
8 TraesCS2D01G209300 chr2B 95.722 4371 98 33 661 4973 232346548 232350887 0.000000e+00 6953.0
9 TraesCS2D01G209300 chr2B 97.302 1186 24 6 5582 6765 232351242 232352421 0.000000e+00 2006.0
10 TraesCS2D01G209300 chr2B 86.916 642 43 18 1 633 73168993 73168384 0.000000e+00 682.0
11 TraesCS2D01G209300 chr2B 78.862 492 76 16 6808 7278 232355198 232355682 2.720000e-79 307.0
12 TraesCS2D01G209300 chr2B 95.028 181 5 2 5121 5300 232351068 232351245 1.650000e-71 281.0
13 TraesCS2D01G209300 chr2B 75.567 397 76 18 7330 7716 705878983 705878598 7.990000e-40 176.0
14 TraesCS2D01G209300 chr2B 96.000 100 2 1 4974 5071 232350970 232351069 2.240000e-35 161.0
15 TraesCS2D01G209300 chr2A 97.794 2448 47 4 1473 3915 185725446 185727891 0.000000e+00 4215.0
16 TraesCS2D01G209300 chr2A 96.012 1379 28 12 3933 5300 185727962 185729324 0.000000e+00 2217.0
17 TraesCS2D01G209300 chr2A 98.049 820 16 0 5582 6401 185729321 185730140 0.000000e+00 1426.0
18 TraesCS2D01G209300 chr2A 92.522 789 23 20 665 1443 185724688 185725450 0.000000e+00 1098.0
19 TraesCS2D01G209300 chr2A 79.051 864 116 33 6823 7653 185730834 185731665 4.120000e-147 532.0
20 TraesCS2D01G209300 chr2A 85.965 342 38 5 162 497 650608670 650608333 2.660000e-94 357.0
21 TraesCS2D01G209300 chr2A 78.826 477 73 18 3 467 723095040 723095500 5.880000e-76 296.0
22 TraesCS2D01G209300 chr2A 95.455 154 6 1 6436 6589 185730136 185730288 2.160000e-60 244.0
23 TraesCS2D01G209300 chr2A 94.262 122 6 1 6650 6771 185730460 185730580 1.330000e-42 185.0
24 TraesCS2D01G209300 chr2A 97.849 93 1 1 5073 5164 115434507 115434415 8.050000e-35 159.0
25 TraesCS2D01G209300 chr2A 80.769 182 30 3 7100 7278 26605213 26605034 3.770000e-28 137.0
26 TraesCS2D01G209300 chr2A 97.368 76 2 0 6579 6654 185730306 185730381 6.310000e-26 130.0
27 TraesCS2D01G209300 chr2A 82.609 138 23 1 7098 7234 68258520 68258657 3.800000e-23 121.0
28 TraesCS2D01G209300 chr1D 90.796 641 41 4 1 633 99457272 99457902 0.000000e+00 841.0
29 TraesCS2D01G209300 chr1D 79.325 237 43 6 7042 7276 489552582 489552814 2.240000e-35 161.0
30 TraesCS2D01G209300 chr1D 78.189 243 42 2 7515 7746 399336167 399335925 2.250000e-30 145.0
31 TraesCS2D01G209300 chr1D 77.826 230 50 1 7042 7270 297380095 297380324 2.910000e-29 141.0
32 TraesCS2D01G209300 chr1D 77.778 243 43 2 7515 7746 399321528 399321286 1.050000e-28 139.0
33 TraesCS2D01G209300 chr1D 76.955 243 41 11 7042 7274 489797907 489798144 2.940000e-24 124.0
34 TraesCS2D01G209300 chr1D 88.060 67 7 1 7148 7214 330557332 330557267 2.320000e-10 78.7
35 TraesCS2D01G209300 chr1D 88.889 45 5 0 7 51 9647283 9647239 1.000000e-03 56.5
36 TraesCS2D01G209300 chr6D 89.969 648 43 10 1 635 429122479 429121841 0.000000e+00 817.0
37 TraesCS2D01G209300 chr6D 96.587 293 7 2 5300 5590 331029951 331029660 4.200000e-132 483.0
38 TraesCS2D01G209300 chr6D 84.691 307 29 8 1 298 447456085 447456382 2.730000e-74 291.0
39 TraesCS2D01G209300 chr6D 78.616 477 70 24 6 468 100565303 100565761 3.540000e-73 287.0
40 TraesCS2D01G209300 chr6D 80.592 304 54 4 167 469 395340286 395340585 6.050000e-56 230.0
41 TraesCS2D01G209300 chr6D 80.263 304 55 4 167 469 395336595 395336894 2.810000e-54 224.0
42 TraesCS2D01G209300 chr6D 80.263 304 55 4 167 469 395338432 395338731 2.810000e-54 224.0
43 TraesCS2D01G209300 chr6D 80.263 304 55 4 167 469 395345436 395345735 2.810000e-54 224.0
44 TraesCS2D01G209300 chr6D 79.934 304 55 5 167 469 395343597 395343895 1.310000e-52 219.0
45 TraesCS2D01G209300 chr6D 76.607 389 79 7 7331 7716 403809481 403809860 3.660000e-48 204.0
46 TraesCS2D01G209300 chr6D 81.148 244 40 5 235 476 355272647 355272886 2.850000e-44 191.0
47 TraesCS2D01G209300 chr6D 84.324 185 26 2 286 469 395334863 395335045 2.220000e-40 178.0
48 TraesCS2D01G209300 chr6D 85.938 128 17 1 4315 4441 53580987 53581114 1.360000e-27 135.0
49 TraesCS2D01G209300 chr6D 78.421 190 34 7 7031 7217 283817550 283817735 4.910000e-22 117.0
50 TraesCS2D01G209300 chr6D 84.706 85 12 1 7137 7220 435988566 435988482 4.980000e-12 84.2
51 TraesCS2D01G209300 chr3A 86.428 781 47 26 5776 6524 548009674 548008921 0.000000e+00 800.0
52 TraesCS2D01G209300 chr3A 96.907 291 7 1 5295 5583 735847505 735847215 3.250000e-133 486.0
53 TraesCS2D01G209300 chr3A 89.163 203 18 4 6518 6718 548008008 548007808 4.640000e-62 250.0
54 TraesCS2D01G209300 chr7D 97.586 290 5 1 5300 5587 254194154 254193865 5.400000e-136 496.0
55 TraesCS2D01G209300 chr7D 97.552 286 5 1 5300 5583 423498474 423498759 9.030000e-134 488.0
56 TraesCS2D01G209300 chr7D 96.897 290 5 3 5296 5583 530408072 530408359 4.200000e-132 483.0
57 TraesCS2D01G209300 chr7D 97.849 93 1 1 5077 5169 426558899 426558990 8.050000e-35 159.0
58 TraesCS2D01G209300 chr7D 98.851 87 1 0 5077 5163 22964257 22964343 1.040000e-33 156.0
59 TraesCS2D01G209300 chr7D 81.379 145 22 5 7075 7217 4874681 4874540 6.350000e-21 113.0
60 TraesCS2D01G209300 chr5D 97.241 290 6 1 5298 5585 508089799 508089510 2.510000e-134 490.0
61 TraesCS2D01G209300 chr5D 97.241 290 5 2 5298 5585 549921559 549921271 9.030000e-134 488.0
62 TraesCS2D01G209300 chr5D 83.406 229 31 5 7521 7744 435525765 435525539 1.020000e-48 206.0
63 TraesCS2D01G209300 chr5D 89.565 115 9 2 5056 5170 240303058 240303169 8.100000e-30 143.0
64 TraesCS2D01G209300 chr5D 77.640 161 31 3 7119 7278 281253260 281253104 8.280000e-15 93.5
65 TraesCS2D01G209300 chr5D 81.132 106 16 3 7383 7485 540335856 540335960 1.790000e-11 82.4
66 TraesCS2D01G209300 chr4A 96.928 293 4 2 5296 5583 575178759 575178467 3.250000e-133 486.0
67 TraesCS2D01G209300 chr4A 78.427 496 81 22 3 484 152742781 152742298 4.540000e-77 300.0
68 TraesCS2D01G209300 chr4A 75.758 330 68 8 7393 7716 3395181 3395504 1.040000e-33 156.0
69 TraesCS2D01G209300 chr4A 91.304 115 5 5 5055 5167 69329835 69329946 1.350000e-32 152.0
70 TraesCS2D01G209300 chr4A 100.000 30 0 0 7714 7743 679991746 679991775 1.000000e-03 56.5
71 TraesCS2D01G209300 chr3D 96.575 292 7 2 5296 5585 285911918 285912208 1.510000e-131 481.0
72 TraesCS2D01G209300 chr3D 77.941 476 82 19 11 475 479745494 479745031 7.660000e-70 276.0
73 TraesCS2D01G209300 chr3D 78.552 359 66 11 7395 7746 48347866 48347512 7.820000e-55 226.0
74 TraesCS2D01G209300 chr3D 80.567 247 46 2 7031 7276 549630426 549630181 1.030000e-43 189.0
75 TraesCS2D01G209300 chr3D 81.429 210 37 2 7506 7714 608126563 608126771 3.720000e-38 171.0
76 TraesCS2D01G209300 chr3D 96.000 100 3 1 5074 5173 54370500 54370402 2.240000e-35 161.0
77 TraesCS2D01G209300 chr3D 80.247 162 26 6 7332 7489 175657606 175657447 4.910000e-22 117.0
78 TraesCS2D01G209300 chr3D 86.207 58 7 1 7689 7746 337246615 337246559 2.330000e-05 62.1
79 TraesCS2D01G209300 chr7B 83.871 403 50 8 86 482 591956122 591955729 3.410000e-98 370.0
80 TraesCS2D01G209300 chr7B 75.287 174 39 4 7442 7613 65628737 65628908 6.440000e-11 80.5
81 TraesCS2D01G209300 chr7B 94.000 50 3 0 7695 7744 453120663 453120614 8.340000e-10 76.8
82 TraesCS2D01G209300 chr1A 80.974 431 69 3 7324 7741 107469064 107469494 5.790000e-86 329.0
83 TraesCS2D01G209300 chr1A 79.045 377 61 14 90 460 39411404 39411040 7.770000e-60 243.0
84 TraesCS2D01G209300 chr1A 94.175 103 5 1 5071 5172 448929831 448929729 1.040000e-33 156.0
85 TraesCS2D01G209300 chr1A 75.000 172 36 6 7047 7216 496395856 496396022 1.080000e-08 73.1
86 TraesCS2D01G209300 chr1B 79.908 433 69 7 7324 7741 161987355 161987784 1.260000e-77 302.0
87 TraesCS2D01G209300 chr1B 100.000 31 0 0 4 34 636797850 636797880 3.020000e-04 58.4
88 TraesCS2D01G209300 chr5B 79.753 405 66 16 86 484 216837680 216838074 5.920000e-71 279.0
89 TraesCS2D01G209300 chr5B 76.533 473 90 18 3 466 38459460 38459920 1.000000e-58 239.0
90 TraesCS2D01G209300 chr5B 76.499 417 72 12 7350 7746 308979273 308978863 3.660000e-48 204.0
91 TraesCS2D01G209300 chr5B 92.000 100 6 2 4339 4437 441635851 441635949 1.050000e-28 139.0
92 TraesCS2D01G209300 chr5B 96.774 31 1 0 4 34 707376919 707376889 1.400000e-02 52.8
93 TraesCS2D01G209300 chr5A 78.151 476 76 20 3 467 660722577 660723035 2.130000e-70 278.0
94 TraesCS2D01G209300 chr5A 93.617 94 4 2 4345 4437 474814295 474814387 1.050000e-28 139.0
95 TraesCS2D01G209300 chr5A 94.444 36 2 0 4345 4380 30557752 30557717 1.000000e-03 56.5
96 TraesCS2D01G209300 chr4D 76.809 539 90 25 3 529 359848247 359847732 3.560000e-68 270.0
97 TraesCS2D01G209300 chr4D 75.829 422 90 10 7330 7745 78688564 78688149 3.660000e-48 204.0
98 TraesCS2D01G209300 chr4D 79.487 195 36 4 7086 7278 490009958 490010150 1.360000e-27 135.0
99 TraesCS2D01G209300 chr4D 100.000 28 0 0 7 34 427609117 427609090 1.400000e-02 52.8
100 TraesCS2D01G209300 chr4B 79.075 411 64 17 84 484 73467148 73466750 5.960000e-66 263.0
101 TraesCS2D01G209300 chr4B 97.849 93 1 1 5073 5164 438099450 438099358 8.050000e-35 159.0
102 TraesCS2D01G209300 chr4B 79.558 181 27 9 7042 7217 32486275 32486100 3.800000e-23 121.0
103 TraesCS2D01G209300 chr6A 78.390 236 44 7 7047 7278 73369401 73369633 6.260000e-31 147.0
104 TraesCS2D01G209300 chr6B 86.207 87 10 2 3083 3168 317887186 317887271 8.280000e-15 93.5
105 TraesCS2D01G209300 chrUn 80.952 105 19 1 7113 7216 305404229 305404125 1.790000e-11 82.4
106 TraesCS2D01G209300 chr3B 92.857 56 4 0 7689 7744 778140360 778140415 1.790000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G209300 chr2D 164990098 164997844 7746 True 14307.000 14307 100.000000 1 7747 1 chr2D.!!$R2 7746
1 TraesCS2D01G209300 chr2B 232346548 232355682 9134 False 1941.600 6953 92.582800 661 7278 5 chr2B.!!$F1 6617
2 TraesCS2D01G209300 chr2B 73168384 73168993 609 True 682.000 682 86.916000 1 633 1 chr2B.!!$R1 632
3 TraesCS2D01G209300 chr2A 185724688 185731665 6977 False 1255.875 4215 93.814125 665 7653 8 chr2A.!!$F3 6988
4 TraesCS2D01G209300 chr1D 99457272 99457902 630 False 841.000 841 90.796000 1 633 1 chr1D.!!$F1 632
5 TraesCS2D01G209300 chr6D 429121841 429122479 638 True 817.000 817 89.969000 1 635 1 chr6D.!!$R2 634
6 TraesCS2D01G209300 chr6D 395334863 395345735 10872 False 216.500 230 80.939833 167 469 6 chr6D.!!$F7 302
7 TraesCS2D01G209300 chr3A 548007808 548009674 1866 True 525.000 800 87.795500 5776 6718 2 chr3A.!!$R2 942
8 TraesCS2D01G209300 chr4D 359847732 359848247 515 True 270.000 270 76.809000 3 529 1 chr4D.!!$R2 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
514 5773 0.252479 AAGAGGGAGTCTGCATGCAG 59.748 55.000 36.8 36.8 44.86 4.41 F
1632 6974 1.134037 TCCATACCGTTACATTGGCCC 60.134 52.381 0.0 0.0 0.00 5.80 F
2191 7535 1.079127 CCGATTCCCGTTGCTGAGT 60.079 57.895 0.0 0.0 36.31 3.41 F
3999 9400 0.678048 CTGGGGTTACTCTTGCCTGC 60.678 60.000 0.0 0.0 0.00 4.85 F
4061 9462 6.352222 CCTCTTGTTAGCTCAGGGATTTTAGA 60.352 42.308 0.0 0.0 0.00 2.10 F
5307 12575 1.272769 CCGTATGCCCTTAGACTAGCC 59.727 57.143 0.0 0.0 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1917 7261 0.032952 GTAACCACTGGCGTGACTCA 59.967 55.000 10.33 0.0 43.97 3.41 R
2533 7877 2.381911 CACTTAATGAATGCTGGCCCT 58.618 47.619 0.00 0.0 0.00 5.19 R
4061 9462 3.446516 GCTGAAGGAAGAAAGGCATGAAT 59.553 43.478 0.00 0.0 0.00 2.57 R
4900 12071 0.106519 GCCCAACTGCCCATGTCTAT 60.107 55.000 0.00 0.0 0.00 1.98 R
5484 12833 2.373169 TGAAGAAAGAGAGGCATGTGGT 59.627 45.455 0.00 0.0 0.00 4.16 R
6792 15562 0.242017 AACCACGTACACTACTCCGC 59.758 55.000 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
231 3636 5.499139 TTCATGCCCGATAATTTTCTGTC 57.501 39.130 0.00 0.00 0.00 3.51
514 5773 0.252479 AAGAGGGAGTCTGCATGCAG 59.748 55.000 36.80 36.80 44.86 4.41
515 5774 1.818785 GAGGGAGTCTGCATGCAGC 60.819 63.158 37.48 30.73 43.31 5.25
531 5790 1.683707 AGCATGCGACAGGGAGAGA 60.684 57.895 13.01 0.00 0.00 3.10
626 5927 1.459592 CCGAACAGTTGGAAGTTAGCG 59.540 52.381 0.00 0.00 0.00 4.26
635 5936 2.762745 TGGAAGTTAGCGAAGTCCAAC 58.237 47.619 8.85 0.00 0.00 3.77
636 5937 2.367567 TGGAAGTTAGCGAAGTCCAACT 59.632 45.455 8.85 0.00 32.73 3.16
637 5938 3.181458 TGGAAGTTAGCGAAGTCCAACTT 60.181 43.478 8.85 0.00 42.36 2.66
638 5939 3.813724 GGAAGTTAGCGAAGTCCAACTTT 59.186 43.478 4.80 0.00 40.38 2.66
639 5940 4.992951 GGAAGTTAGCGAAGTCCAACTTTA 59.007 41.667 4.80 0.00 40.38 1.85
641 5942 6.148976 GGAAGTTAGCGAAGTCCAACTTTAAT 59.851 38.462 4.80 0.00 40.38 1.40
643 5944 7.130303 AGTTAGCGAAGTCCAACTTTAATTC 57.870 36.000 0.00 0.00 38.80 2.17
644 5945 6.708949 AGTTAGCGAAGTCCAACTTTAATTCA 59.291 34.615 0.00 0.00 38.80 2.57
645 5946 5.358298 AGCGAAGTCCAACTTTAATTCAC 57.642 39.130 0.00 0.00 38.80 3.18
648 5949 5.504994 GCGAAGTCCAACTTTAATTCACACA 60.505 40.000 0.00 0.00 38.80 3.72
649 5950 6.491394 CGAAGTCCAACTTTAATTCACACAA 58.509 36.000 0.00 0.00 38.80 3.33
650 5951 6.632834 CGAAGTCCAACTTTAATTCACACAAG 59.367 38.462 0.00 0.00 38.80 3.16
651 5952 6.391227 AGTCCAACTTTAATTCACACAAGG 57.609 37.500 0.00 0.00 0.00 3.61
652 5953 4.982295 GTCCAACTTTAATTCACACAAGGC 59.018 41.667 0.00 0.00 0.00 4.35
654 5955 4.039124 CCAACTTTAATTCACACAAGGCCT 59.961 41.667 0.00 0.00 0.00 5.19
655 5956 5.222631 CAACTTTAATTCACACAAGGCCTC 58.777 41.667 5.23 0.00 0.00 4.70
656 5957 4.729868 ACTTTAATTCACACAAGGCCTCT 58.270 39.130 5.23 0.00 0.00 3.69
659 5960 6.775629 ACTTTAATTCACACAAGGCCTCTAAA 59.224 34.615 5.23 0.00 0.00 1.85
678 5979 8.925700 CCTCTAAATTTTCAACAATTTAGCACC 58.074 33.333 16.20 0.00 46.96 5.01
695 5996 2.769617 CGCGTACACGGCTCTTTG 59.230 61.111 0.00 0.00 40.23 2.77
706 6011 3.058914 CACGGCTCTTTGGACTTTACAAG 60.059 47.826 0.00 0.00 0.00 3.16
1031 6352 5.118510 GGACAACAAACAAATATCGCAAAGG 59.881 40.000 0.00 0.00 0.00 3.11
1032 6353 5.837437 ACAACAAACAAATATCGCAAAGGA 58.163 33.333 0.00 0.00 0.00 3.36
1033 6354 5.920273 ACAACAAACAAATATCGCAAAGGAG 59.080 36.000 0.00 0.00 0.00 3.69
1099 6420 1.407299 CCGCATCTCAGTTCCAATCCA 60.407 52.381 0.00 0.00 0.00 3.41
1427 6768 1.537202 GACACGGCTTTGCTGAATTCT 59.463 47.619 7.05 0.00 38.46 2.40
1493 6834 9.935682 ACGAATATATTTTATTGTGAGTTGCTG 57.064 29.630 0.00 0.00 0.00 4.41
1580 6922 8.633561 GGGCTTCAAATCTAGCTTAAATATGTT 58.366 33.333 0.00 0.00 37.54 2.71
1632 6974 1.134037 TCCATACCGTTACATTGGCCC 60.134 52.381 0.00 0.00 0.00 5.80
1699 7041 5.830912 TGTCGAAGTTTGCAATTTGATTCT 58.169 33.333 0.00 0.00 0.00 2.40
1700 7042 5.686841 TGTCGAAGTTTGCAATTTGATTCTG 59.313 36.000 0.00 0.00 0.00 3.02
1740 7082 6.994421 AAAATATGGCTAGTATTTTGGGGG 57.006 37.500 8.14 0.00 39.19 5.40
1746 7088 3.699538 GGCTAGTATTTTGGGGGAAGTTG 59.300 47.826 0.00 0.00 0.00 3.16
1814 7158 8.755028 AGTTTTAAATTTCACCCTGTAAGTGTT 58.245 29.630 0.00 0.00 36.58 3.32
1818 7162 7.506328 AAATTTCACCCTGTAAGTGTTAGAC 57.494 36.000 0.00 0.00 36.58 2.59
1917 7261 1.528309 CAGCCCGTTTGTCCCAGTT 60.528 57.895 0.00 0.00 0.00 3.16
1984 7328 2.031683 GTCAACAAGGCGAAATATCCCG 59.968 50.000 0.00 0.00 0.00 5.14
2110 7454 2.225091 TGGGGCAGTGTCAAATTCATCT 60.225 45.455 0.00 0.00 0.00 2.90
2155 7499 1.419381 TGAAGCGGCCCAGTCATATA 58.581 50.000 0.00 0.00 0.00 0.86
2191 7535 1.079127 CCGATTCCCGTTGCTGAGT 60.079 57.895 0.00 0.00 36.31 3.41
2230 7574 4.358494 AACTCTGTCCTTAACGAGATCG 57.642 45.455 0.00 0.00 46.33 3.69
2302 7646 2.575993 CCTGTCCTGGCAGACTCG 59.424 66.667 17.94 0.00 38.70 4.18
2767 8111 2.426738 ACAAATACATCGGGCCACATTG 59.573 45.455 4.39 0.00 0.00 2.82
2789 8133 1.096416 AGATCGTCCTGACTCGAACC 58.904 55.000 0.00 0.00 39.45 3.62
3395 8740 6.715280 TCAGCCACTGAATTCTTCTTTATCT 58.285 36.000 7.05 0.00 37.57 1.98
3860 9208 2.039480 CTGGGTGCCTGCATATACAGAT 59.961 50.000 4.39 0.00 40.25 2.90
3999 9400 0.678048 CTGGGGTTACTCTTGCCTGC 60.678 60.000 0.00 0.00 0.00 4.85
4061 9462 6.352222 CCTCTTGTTAGCTCAGGGATTTTAGA 60.352 42.308 0.00 0.00 0.00 2.10
4803 10221 8.583810 TGCTATGTTTCGGTTATTATACTGTC 57.416 34.615 0.00 0.00 0.00 3.51
4821 10239 6.380079 ACTGTCTACAGAAGGGAATTTGAT 57.620 37.500 16.74 0.00 46.59 2.57
5085 12340 7.397476 TCATCATCACTACATTATACTCCCTCC 59.603 40.741 0.00 0.00 0.00 4.30
5254 12522 3.274288 CTGACCACCCTTTTCTATGCTC 58.726 50.000 0.00 0.00 0.00 4.26
5298 12566 3.611766 GCATAGTATCCGTATGCCCTT 57.388 47.619 4.09 0.00 44.75 3.95
5299 12567 4.730949 GCATAGTATCCGTATGCCCTTA 57.269 45.455 4.09 0.00 44.75 2.69
5300 12568 4.683832 GCATAGTATCCGTATGCCCTTAG 58.316 47.826 4.09 0.00 44.75 2.18
5301 12569 4.401519 GCATAGTATCCGTATGCCCTTAGA 59.598 45.833 4.09 0.00 44.75 2.10
5302 12570 5.679127 GCATAGTATCCGTATGCCCTTAGAC 60.679 48.000 4.09 0.00 44.75 2.59
5304 12572 5.252586 AGTATCCGTATGCCCTTAGACTA 57.747 43.478 0.00 0.00 0.00 2.59
5305 12573 5.254901 AGTATCCGTATGCCCTTAGACTAG 58.745 45.833 0.00 0.00 0.00 2.57
5306 12574 2.236766 TCCGTATGCCCTTAGACTAGC 58.763 52.381 0.00 0.00 0.00 3.42
5307 12575 1.272769 CCGTATGCCCTTAGACTAGCC 59.727 57.143 0.00 0.00 0.00 3.93
5310 12578 1.879575 ATGCCCTTAGACTAGCCACA 58.120 50.000 0.00 0.00 0.00 4.17
5311 12579 1.651737 TGCCCTTAGACTAGCCACAA 58.348 50.000 0.00 0.00 0.00 3.33
5312 12580 2.196595 TGCCCTTAGACTAGCCACAAT 58.803 47.619 0.00 0.00 0.00 2.71
5313 12581 2.092968 TGCCCTTAGACTAGCCACAATG 60.093 50.000 0.00 0.00 0.00 2.82
5315 12583 2.158755 CCCTTAGACTAGCCACAATGGG 60.159 54.545 0.00 0.00 38.19 4.00
5328 12596 5.057149 GCCACAATGGGTAGTAACATAGAG 58.943 45.833 0.00 0.00 38.19 2.43
5329 12597 5.396436 GCCACAATGGGTAGTAACATAGAGT 60.396 44.000 0.00 0.00 38.19 3.24
5330 12598 6.183360 GCCACAATGGGTAGTAACATAGAGTA 60.183 42.308 0.00 0.00 38.19 2.59
5332 12600 7.069578 CCACAATGGGTAGTAACATAGAGTAGT 59.930 40.741 0.00 0.00 32.67 2.73
5334 12602 9.705103 ACAATGGGTAGTAACATAGAGTAGTAA 57.295 33.333 0.00 0.00 0.00 2.24
5335 12603 9.962783 CAATGGGTAGTAACATAGAGTAGTAAC 57.037 37.037 0.00 0.00 0.00 2.50
5336 12604 9.705103 AATGGGTAGTAACATAGAGTAGTAACA 57.295 33.333 0.00 0.00 0.00 2.41
5337 12605 9.878737 ATGGGTAGTAACATAGAGTAGTAACAT 57.121 33.333 0.00 0.00 0.00 2.71
5341 12609 9.460906 GTAGTAACATAGAGTAGTAACATTGCC 57.539 37.037 0.00 0.00 0.00 4.52
5342 12610 7.498443 AGTAACATAGAGTAGTAACATTGCCC 58.502 38.462 0.00 0.00 0.00 5.36
5344 12612 6.500589 ACATAGAGTAGTAACATTGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
5345 12613 6.291377 ACATAGAGTAGTAACATTGCCCATG 58.709 40.000 0.00 0.00 39.07 3.66
5355 12623 4.844349 ACATTGCCCATGTTACTACTCT 57.156 40.909 0.00 0.00 44.40 3.24
5357 12625 6.500589 ACATTGCCCATGTTACTACTCTAT 57.499 37.500 0.00 0.00 44.40 1.98
5358 12626 6.291377 ACATTGCCCATGTTACTACTCTATG 58.709 40.000 0.00 0.00 44.40 2.23
5360 12628 5.950544 TGCCCATGTTACTACTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
5361 12629 7.426606 TTGCCCATGTTACTACTCTATGTTA 57.573 36.000 0.00 0.00 0.00 2.41
5362 12630 6.812998 TGCCCATGTTACTACTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
5363 12631 6.610020 TGCCCATGTTACTACTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
5364 12632 7.781219 TGCCCATGTTACTACTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
5365 12633 8.081025 GCCCATGTTACTACTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
5366 12634 8.574737 CCCATGTTACTACTCTATGTTACTACC 58.425 40.741 0.00 0.00 0.00 3.18
5367 12635 8.574737 CCATGTTACTACTCTATGTTACTACCC 58.425 40.741 0.00 0.00 0.00 3.69
5368 12636 8.574737 CATGTTACTACTCTATGTTACTACCCC 58.425 40.741 0.00 0.00 0.00 4.95
5374 12642 9.404077 ACTACTCTATGTTACTACCCCTATAGT 57.596 37.037 0.00 0.00 38.89 2.12
5375 12643 9.669887 CTACTCTATGTTACTACCCCTATAGTG 57.330 40.741 0.00 0.00 36.09 2.74
5390 12658 6.023603 CCCTATAGTGGGGAGTAACATATGT 58.976 44.000 1.41 1.41 46.50 2.29
5391 12659 6.070767 CCCTATAGTGGGGAGTAACATATGTG 60.071 46.154 9.63 0.00 46.50 3.21
5393 12661 4.487714 AGTGGGGAGTAACATATGTGTG 57.512 45.455 9.63 0.00 38.92 3.82
5394 12662 3.199946 AGTGGGGAGTAACATATGTGTGG 59.800 47.826 9.63 0.00 38.92 4.17
5395 12663 3.054655 GTGGGGAGTAACATATGTGTGGT 60.055 47.826 9.63 0.00 38.92 4.16
5398 12666 5.121105 GGGGAGTAACATATGTGTGGTAAC 58.879 45.833 9.63 1.91 38.92 2.50
5414 12682 5.528043 TGGTAACATGCAACACTTCATTT 57.472 34.783 0.00 0.00 46.17 2.32
5415 12683 6.641169 TGGTAACATGCAACACTTCATTTA 57.359 33.333 0.00 0.00 46.17 1.40
5417 12685 7.665690 TGGTAACATGCAACACTTCATTTATT 58.334 30.769 0.00 0.00 46.17 1.40
5418 12686 8.797438 TGGTAACATGCAACACTTCATTTATTA 58.203 29.630 0.00 0.00 46.17 0.98
5419 12687 9.289303 GGTAACATGCAACACTTCATTTATTAG 57.711 33.333 0.00 0.00 0.00 1.73
5420 12688 9.289303 GTAACATGCAACACTTCATTTATTAGG 57.711 33.333 0.00 0.00 0.00 2.69
5421 12689 6.332630 ACATGCAACACTTCATTTATTAGGC 58.667 36.000 0.00 0.00 0.00 3.93
5422 12690 6.153340 ACATGCAACACTTCATTTATTAGGCT 59.847 34.615 0.00 0.00 0.00 4.58
5423 12691 7.339212 ACATGCAACACTTCATTTATTAGGCTA 59.661 33.333 0.00 0.00 0.00 3.93
5425 12693 8.972458 TGCAACACTTCATTTATTAGGCTATA 57.028 30.769 0.00 0.00 0.00 1.31
5427 12695 9.273016 GCAACACTTCATTTATTAGGCTATAGA 57.727 33.333 3.21 0.00 0.00 1.98
5437 12705 9.883142 ATTTATTAGGCTATAGACTCATCTTGC 57.117 33.333 12.64 0.00 36.29 4.01
5439 12707 3.855668 AGGCTATAGACTCATCTTGCCT 58.144 45.455 0.83 0.00 43.78 4.75
5440 12708 4.230455 AGGCTATAGACTCATCTTGCCTT 58.770 43.478 0.83 0.00 45.01 4.35
5441 12709 4.040217 AGGCTATAGACTCATCTTGCCTTG 59.960 45.833 0.83 0.00 45.01 3.61
5444 12712 6.071108 GGCTATAGACTCATCTTGCCTTGATA 60.071 42.308 3.21 0.00 39.50 2.15
5445 12713 7.364585 GGCTATAGACTCATCTTGCCTTGATAT 60.365 40.741 3.21 0.00 39.50 1.63
5447 12715 5.627182 AGACTCATCTTGCCTTGATATGT 57.373 39.130 0.00 0.00 0.00 2.29
5448 12716 5.366460 AGACTCATCTTGCCTTGATATGTG 58.634 41.667 0.00 0.00 0.00 3.21
5449 12717 5.104610 AGACTCATCTTGCCTTGATATGTGT 60.105 40.000 0.00 0.00 0.00 3.72
5450 12718 4.880120 ACTCATCTTGCCTTGATATGTGTG 59.120 41.667 0.00 0.00 0.00 3.82
5461 12810 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
5470 12819 8.803397 TGTGTGATGTTACTCATACTAGTAGT 57.197 34.615 8.85 8.14 37.92 2.73
5471 12820 9.895138 TGTGTGATGTTACTCATACTAGTAGTA 57.105 33.333 12.38 12.38 37.92 1.82
5489 12838 9.334947 CTAGTAGTAACTAGCTATGTTACCACA 57.665 37.037 26.31 18.52 46.53 4.17
5490 12839 8.763984 AGTAGTAACTAGCTATGTTACCACAT 57.236 34.615 26.31 18.10 46.31 3.21
5491 12840 8.630917 AGTAGTAACTAGCTATGTTACCACATG 58.369 37.037 26.31 0.00 46.31 3.21
5492 12841 6.281405 AGTAACTAGCTATGTTACCACATGC 58.719 40.000 25.92 11.98 46.31 4.06
5493 12842 4.073293 ACTAGCTATGTTACCACATGCC 57.927 45.455 0.00 0.00 43.92 4.40
5494 12843 3.711704 ACTAGCTATGTTACCACATGCCT 59.288 43.478 0.00 0.00 43.92 4.75
5495 12844 3.199880 AGCTATGTTACCACATGCCTC 57.800 47.619 0.00 0.00 43.92 4.70
5496 12845 2.774234 AGCTATGTTACCACATGCCTCT 59.226 45.455 0.00 0.00 43.92 3.69
5497 12846 3.134458 GCTATGTTACCACATGCCTCTC 58.866 50.000 0.00 0.00 43.92 3.20
5498 12847 3.181461 GCTATGTTACCACATGCCTCTCT 60.181 47.826 0.00 0.00 43.92 3.10
5499 12848 4.684485 GCTATGTTACCACATGCCTCTCTT 60.684 45.833 0.00 0.00 43.92 2.85
5500 12849 3.788227 TGTTACCACATGCCTCTCTTT 57.212 42.857 0.00 0.00 0.00 2.52
5501 12850 3.674997 TGTTACCACATGCCTCTCTTTC 58.325 45.455 0.00 0.00 0.00 2.62
5502 12851 3.327757 TGTTACCACATGCCTCTCTTTCT 59.672 43.478 0.00 0.00 0.00 2.52
5503 12852 4.202461 TGTTACCACATGCCTCTCTTTCTT 60.202 41.667 0.00 0.00 0.00 2.52
5504 12853 3.064900 ACCACATGCCTCTCTTTCTTC 57.935 47.619 0.00 0.00 0.00 2.87
5505 12854 2.373169 ACCACATGCCTCTCTTTCTTCA 59.627 45.455 0.00 0.00 0.00 3.02
5506 12855 3.009916 ACCACATGCCTCTCTTTCTTCAT 59.990 43.478 0.00 0.00 0.00 2.57
5507 12856 4.015084 CCACATGCCTCTCTTTCTTCATT 58.985 43.478 0.00 0.00 0.00 2.57
5508 12857 4.461781 CCACATGCCTCTCTTTCTTCATTT 59.538 41.667 0.00 0.00 0.00 2.32
5509 12858 5.649395 CCACATGCCTCTCTTTCTTCATTTA 59.351 40.000 0.00 0.00 0.00 1.40
5510 12859 6.320672 CCACATGCCTCTCTTTCTTCATTTAT 59.679 38.462 0.00 0.00 0.00 1.40
5511 12860 7.147949 CCACATGCCTCTCTTTCTTCATTTATT 60.148 37.037 0.00 0.00 0.00 1.40
5512 12861 7.701078 CACATGCCTCTCTTTCTTCATTTATTG 59.299 37.037 0.00 0.00 0.00 1.90
5513 12862 6.199937 TGCCTCTCTTTCTTCATTTATTGC 57.800 37.500 0.00 0.00 0.00 3.56
5514 12863 5.948162 TGCCTCTCTTTCTTCATTTATTGCT 59.052 36.000 0.00 0.00 0.00 3.91
5515 12864 6.435277 TGCCTCTCTTTCTTCATTTATTGCTT 59.565 34.615 0.00 0.00 0.00 3.91
5516 12865 6.750963 GCCTCTCTTTCTTCATTTATTGCTTG 59.249 38.462 0.00 0.00 0.00 4.01
5517 12866 6.750963 CCTCTCTTTCTTCATTTATTGCTTGC 59.249 38.462 0.00 0.00 0.00 4.01
5518 12867 6.624423 TCTCTTTCTTCATTTATTGCTTGCC 58.376 36.000 0.00 0.00 0.00 4.52
5519 12868 6.209192 TCTCTTTCTTCATTTATTGCTTGCCA 59.791 34.615 0.00 0.00 0.00 4.92
5520 12869 6.158598 TCTTTCTTCATTTATTGCTTGCCAC 58.841 36.000 0.00 0.00 0.00 5.01
5521 12870 5.465532 TTCTTCATTTATTGCTTGCCACA 57.534 34.783 0.00 0.00 0.00 4.17
5522 12871 5.664294 TCTTCATTTATTGCTTGCCACAT 57.336 34.783 0.00 0.00 0.00 3.21
5523 12872 5.653507 TCTTCATTTATTGCTTGCCACATC 58.346 37.500 0.00 0.00 0.00 3.06
5524 12873 5.185442 TCTTCATTTATTGCTTGCCACATCA 59.815 36.000 0.00 0.00 0.00 3.07
5525 12874 5.601583 TCATTTATTGCTTGCCACATCAT 57.398 34.783 0.00 0.00 0.00 2.45
5526 12875 5.593968 TCATTTATTGCTTGCCACATCATC 58.406 37.500 0.00 0.00 0.00 2.92
5527 12876 5.361571 TCATTTATTGCTTGCCACATCATCT 59.638 36.000 0.00 0.00 0.00 2.90
5528 12877 6.546772 TCATTTATTGCTTGCCACATCATCTA 59.453 34.615 0.00 0.00 0.00 1.98
5529 12878 6.964807 TTTATTGCTTGCCACATCATCTAT 57.035 33.333 0.00 0.00 0.00 1.98
5530 12879 6.964807 TTATTGCTTGCCACATCATCTATT 57.035 33.333 0.00 0.00 0.00 1.73
5531 12880 5.864418 ATTGCTTGCCACATCATCTATTT 57.136 34.783 0.00 0.00 0.00 1.40
5532 12881 5.664294 TTGCTTGCCACATCATCTATTTT 57.336 34.783 0.00 0.00 0.00 1.82
5533 12882 6.772360 TTGCTTGCCACATCATCTATTTTA 57.228 33.333 0.00 0.00 0.00 1.52
5534 12883 6.964807 TGCTTGCCACATCATCTATTTTAT 57.035 33.333 0.00 0.00 0.00 1.40
5535 12884 6.973843 TGCTTGCCACATCATCTATTTTATC 58.026 36.000 0.00 0.00 0.00 1.75
5536 12885 6.774170 TGCTTGCCACATCATCTATTTTATCT 59.226 34.615 0.00 0.00 0.00 1.98
5537 12886 7.938490 TGCTTGCCACATCATCTATTTTATCTA 59.062 33.333 0.00 0.00 0.00 1.98
5538 12887 8.449397 GCTTGCCACATCATCTATTTTATCTAG 58.551 37.037 0.00 0.00 0.00 2.43
5539 12888 9.716531 CTTGCCACATCATCTATTTTATCTAGA 57.283 33.333 0.00 0.00 0.00 2.43
5542 12891 9.664332 GCCACATCATCTATTTTATCTAGATGT 57.336 33.333 15.79 0.00 46.65 3.06
5557 12906 9.642343 TTATCTAGATGTGTGATGTTACTACCT 57.358 33.333 15.79 0.00 0.00 3.08
5559 12908 9.815306 ATCTAGATGTGTGATGTTACTACCTAT 57.185 33.333 3.89 0.00 0.00 2.57
5560 12909 9.067986 TCTAGATGTGTGATGTTACTACCTATG 57.932 37.037 0.00 0.00 0.00 2.23
5561 12910 7.661536 AGATGTGTGATGTTACTACCTATGT 57.338 36.000 0.00 0.00 0.00 2.29
5562 12911 8.079211 AGATGTGTGATGTTACTACCTATGTT 57.921 34.615 0.00 0.00 0.00 2.71
5563 12912 9.197306 AGATGTGTGATGTTACTACCTATGTTA 57.803 33.333 0.00 0.00 0.00 2.41
5564 12913 9.245962 GATGTGTGATGTTACTACCTATGTTAC 57.754 37.037 0.00 0.00 0.00 2.50
5565 12914 8.357290 TGTGTGATGTTACTACCTATGTTACT 57.643 34.615 0.00 0.00 0.00 2.24
5566 12915 8.464404 TGTGTGATGTTACTACCTATGTTACTC 58.536 37.037 0.00 0.00 0.00 2.59
5567 12916 7.919621 GTGTGATGTTACTACCTATGTTACTCC 59.080 40.741 0.00 0.00 0.00 3.85
5568 12917 7.069085 TGTGATGTTACTACCTATGTTACTCCC 59.931 40.741 0.00 0.00 0.00 4.30
5569 12918 7.069085 GTGATGTTACTACCTATGTTACTCCCA 59.931 40.741 0.00 0.00 0.00 4.37
5570 12919 7.787904 TGATGTTACTACCTATGTTACTCCCAT 59.212 37.037 0.00 0.00 0.00 4.00
5571 12920 7.983166 TGTTACTACCTATGTTACTCCCATT 57.017 36.000 0.00 0.00 0.00 3.16
5572 12921 7.788026 TGTTACTACCTATGTTACTCCCATTG 58.212 38.462 0.00 0.00 0.00 2.82
5573 12922 7.400915 TGTTACTACCTATGTTACTCCCATTGT 59.599 37.037 0.00 0.00 0.00 2.71
5574 12923 6.235231 ACTACCTATGTTACTCCCATTGTG 57.765 41.667 0.00 0.00 0.00 3.33
5575 12924 4.503714 ACCTATGTTACTCCCATTGTGG 57.496 45.455 0.00 0.00 37.25 4.17
5846 13195 4.379339 TGTTTTGTGCTAACCAACCTTC 57.621 40.909 0.00 0.00 0.00 3.46
5938 13288 4.593206 TCGAGCTATGGATTCTTACCCAAT 59.407 41.667 0.00 0.00 35.85 3.16
6012 13364 1.341209 GGCCTTTTGTTAGTTGCTGCT 59.659 47.619 0.00 0.00 0.00 4.24
6490 13867 0.533491 TCACGGGGTTCTGTAATCCG 59.467 55.000 0.00 0.00 45.42 4.18
6589 14885 3.063588 GGTTAATCCTTCGTACTTGCAGC 59.936 47.826 0.00 0.00 0.00 5.25
6675 15083 1.757682 TGCGTTTTCTGTGAAACCCT 58.242 45.000 0.00 0.00 36.42 4.34
6773 15322 6.062095 CCTCCCCGTTCAAATATAAGATGTT 58.938 40.000 0.00 0.00 0.00 2.71
6792 15562 7.605449 AGATGTTTTGGATATTTGTGAACAGG 58.395 34.615 0.00 0.00 0.00 4.00
6802 15572 0.317160 TGTGAACAGGCGGAGTAGTG 59.683 55.000 0.00 0.00 0.00 2.74
6804 15574 1.542915 GTGAACAGGCGGAGTAGTGTA 59.457 52.381 0.00 0.00 0.00 2.90
6805 15575 1.542915 TGAACAGGCGGAGTAGTGTAC 59.457 52.381 0.00 0.00 0.00 2.90
6806 15576 0.524862 AACAGGCGGAGTAGTGTACG 59.475 55.000 0.00 0.00 0.00 3.67
6808 15578 0.179171 CAGGCGGAGTAGTGTACGTG 60.179 60.000 0.00 0.00 0.00 4.49
6809 15579 1.138247 GGCGGAGTAGTGTACGTGG 59.862 63.158 0.00 0.00 0.00 4.94
6821 18233 5.458041 AGTGTACGTGGTTTCTAAGCTTA 57.542 39.130 5.94 5.94 0.00 3.09
6899 18314 2.586357 GCCCGGAAAGCTAGCGAG 60.586 66.667 9.55 0.12 0.00 5.03
6902 18317 1.084370 CCCGGAAAGCTAGCGAGTTG 61.084 60.000 9.55 0.58 0.00 3.16
6903 18318 1.696832 CCGGAAAGCTAGCGAGTTGC 61.697 60.000 9.55 9.40 46.98 4.17
6917 18332 3.029074 CGAGTTGCTTTCACTTTGTTCG 58.971 45.455 0.00 0.00 0.00 3.95
6932 18347 2.390938 TGTTCGCGCCGATTAGATTAG 58.609 47.619 0.00 0.00 35.23 1.73
6989 18411 5.595885 GAGCATCTACAATAAGCACTCAGA 58.404 41.667 0.00 0.00 0.00 3.27
7012 18434 9.829507 CAGACCTCAAATAATCTCTTCTACAAT 57.170 33.333 0.00 0.00 0.00 2.71
7070 18498 8.454894 TGCATGCAACGTAAAATCTAATCTAAA 58.545 29.630 20.30 0.00 0.00 1.85
7072 18500 9.767684 CATGCAACGTAAAATCTAATCTAAACA 57.232 29.630 0.00 0.00 0.00 2.83
7093 18521 4.838486 CTCGTCTCACTCCGCCGC 62.838 72.222 0.00 0.00 0.00 6.53
7111 18539 4.783621 GCTCATGTCCAGCGGCCA 62.784 66.667 2.24 0.00 0.00 5.36
7127 18555 1.600636 CCAGCTGCGTCCCTCAAAA 60.601 57.895 8.66 0.00 0.00 2.44
7141 18569 1.879380 CTCAAAATGTTGCTCCGGTCA 59.121 47.619 0.00 0.00 34.50 4.02
7194 18622 2.584391 GGCTCACGGGACTCAAGGT 61.584 63.158 0.00 0.00 0.00 3.50
7221 18650 3.370103 CCGTCTCCCATGCCTACTTTTTA 60.370 47.826 0.00 0.00 0.00 1.52
7223 18652 4.881850 CGTCTCCCATGCCTACTTTTTATT 59.118 41.667 0.00 0.00 0.00 1.40
7246 18675 0.902531 GGAGTCCGGAACCTTCATGA 59.097 55.000 5.23 0.00 0.00 3.07
7248 18677 2.698797 GGAGTCCGGAACCTTCATGATA 59.301 50.000 5.23 0.00 0.00 2.15
7270 18702 1.656652 GGTGGACGTGAGATCAATGG 58.343 55.000 0.00 0.00 0.00 3.16
7278 18710 2.808202 CGTGAGATCAATGGTGGATCCC 60.808 54.545 9.90 0.00 41.64 3.85
7368 18826 3.561213 CGCTCACTGCCTCGCATG 61.561 66.667 0.00 0.00 38.13 4.06
7369 18827 2.125391 GCTCACTGCCTCGCATGA 60.125 61.111 0.00 0.00 38.13 3.07
7373 18831 2.515523 ACTGCCTCGCATGATGGC 60.516 61.111 14.51 14.51 46.26 4.40
7378 18836 1.527611 CCTCGCATGATGGCCACAT 60.528 57.895 8.16 11.51 40.85 3.21
7400 18860 2.920869 CCATATGCGTCGCACGAC 59.079 61.111 24.34 13.02 46.05 4.34
7401 18861 1.876263 CCATATGCGTCGCACGACA 60.876 57.895 24.34 8.59 46.05 4.35
7417 18877 1.298859 GACACCCATGCGTTCACCTC 61.299 60.000 0.00 0.00 0.00 3.85
7418 18878 2.040544 CACCCATGCGTTCACCTCC 61.041 63.158 0.00 0.00 0.00 4.30
7476 18936 4.978773 CGTTCAAACGCCAAACGA 57.021 50.000 1.95 0.00 46.42 3.85
7486 18946 4.676586 CCAAACGAACCGCACCGC 62.677 66.667 0.00 0.00 0.00 5.68
7503 18963 3.164269 CCTACCCCGAGGCAGCAT 61.164 66.667 0.00 0.00 36.11 3.79
7512 18972 2.034687 AGGCAGCATGGACACACC 59.965 61.111 0.00 0.00 35.86 4.16
7529 18989 2.514592 CTTGCGGCGGATCCATGT 60.515 61.111 13.41 0.00 34.01 3.21
7550 19010 1.468985 CCATTTGGGCGGACACAATA 58.531 50.000 0.00 0.00 0.00 1.90
7556 19016 1.837439 TGGGCGGACACAATAGATTCT 59.163 47.619 0.00 0.00 0.00 2.40
7559 19019 2.128035 GCGGACACAATAGATTCTCGG 58.872 52.381 0.00 0.00 0.00 4.63
7560 19020 2.481449 GCGGACACAATAGATTCTCGGT 60.481 50.000 0.00 0.00 0.00 4.69
7608 19068 2.685380 CCTCCTCCCAGAAGCGGT 60.685 66.667 0.00 0.00 0.00 5.68
7617 19077 4.314440 AGAAGCGGTGGAGCGCAA 62.314 61.111 23.53 0.00 43.00 4.85
7618 19078 3.793144 GAAGCGGTGGAGCGCAAG 61.793 66.667 23.53 0.00 43.00 4.01
7623 19083 4.115199 GGTGGAGCGCAAGGGGAT 62.115 66.667 11.47 0.00 38.28 3.85
7625 19085 4.113815 TGGAGCGCAAGGGGATGG 62.114 66.667 11.47 0.00 38.28 3.51
7633 19093 0.548031 GCAAGGGGATGGTCATCTCA 59.452 55.000 12.30 0.00 40.07 3.27
7642 19102 2.268796 TGGTCATCTCATCCTTGGGA 57.731 50.000 0.00 0.00 36.59 4.37
7646 19106 1.123077 CATCTCATCCTTGGGACCGA 58.877 55.000 0.00 0.00 34.40 4.69
7655 19115 3.813606 TTGGGACCGAGTGGGACGA 62.814 63.158 0.00 0.00 40.75 4.20
7656 19116 3.450115 GGGACCGAGTGGGACGAG 61.450 72.222 0.00 0.00 40.75 4.18
7658 19118 3.063084 GACCGAGTGGGACGAGCT 61.063 66.667 0.00 0.00 40.75 4.09
7660 19120 3.827898 CCGAGTGGGACGAGCTCC 61.828 72.222 8.47 0.00 38.47 4.70
7661 19121 4.180946 CGAGTGGGACGAGCTCCG 62.181 72.222 8.47 6.07 40.56 4.63
7662 19122 3.827898 GAGTGGGACGAGCTCCGG 61.828 72.222 8.47 0.00 43.93 5.14
7663 19123 4.361971 AGTGGGACGAGCTCCGGA 62.362 66.667 8.47 2.93 43.93 5.14
7664 19124 3.148279 GTGGGACGAGCTCCGGAT 61.148 66.667 3.57 0.00 43.93 4.18
7665 19125 2.833582 TGGGACGAGCTCCGGATC 60.834 66.667 3.57 0.00 43.93 3.36
7666 19126 2.833582 GGGACGAGCTCCGGATCA 60.834 66.667 3.57 0.00 43.93 2.92
7667 19127 2.423898 GGGACGAGCTCCGGATCAA 61.424 63.158 3.57 0.00 43.93 2.57
7668 19128 1.742768 GGACGAGCTCCGGATCAAT 59.257 57.895 3.57 0.00 43.93 2.57
7670 19130 0.598680 GACGAGCTCCGGATCAATGG 60.599 60.000 3.57 0.00 43.93 3.16
7672 19132 0.319728 CGAGCTCCGGATCAATGGAT 59.680 55.000 3.57 0.00 36.13 3.41
7675 19135 2.551459 GAGCTCCGGATCAATGGATTTG 59.449 50.000 3.57 0.00 32.67 2.32
7676 19136 1.610522 GCTCCGGATCAATGGATTTGG 59.389 52.381 3.57 0.00 35.92 3.28
7677 19137 2.749466 GCTCCGGATCAATGGATTTGGA 60.749 50.000 3.57 4.63 36.36 3.53
7678 19138 3.144506 CTCCGGATCAATGGATTTGGAG 58.855 50.000 3.57 14.06 43.12 3.86
7680 19140 2.423373 CCGGATCAATGGATTTGGAGGT 60.423 50.000 0.00 0.00 35.92 3.85
7682 19142 3.635591 GGATCAATGGATTTGGAGGTGT 58.364 45.455 0.00 0.00 35.92 4.16
7683 19143 4.685848 CGGATCAATGGATTTGGAGGTGTA 60.686 45.833 0.00 0.00 35.92 2.90
7684 19144 4.823989 GGATCAATGGATTTGGAGGTGTAG 59.176 45.833 0.00 0.00 35.92 2.74
7686 19146 3.849574 TCAATGGATTTGGAGGTGTAGGA 59.150 43.478 0.00 0.00 35.92 2.94
7687 19147 3.933861 ATGGATTTGGAGGTGTAGGAC 57.066 47.619 0.00 0.00 0.00 3.85
7689 19149 2.838202 TGGATTTGGAGGTGTAGGACTC 59.162 50.000 0.00 0.00 0.00 3.36
7690 19150 2.838202 GGATTTGGAGGTGTAGGACTCA 59.162 50.000 0.00 0.00 35.45 3.41
7691 19151 3.118592 GGATTTGGAGGTGTAGGACTCAG 60.119 52.174 0.00 0.00 35.45 3.35
7692 19152 2.992847 TTGGAGGTGTAGGACTCAGA 57.007 50.000 0.00 0.00 35.45 3.27
7694 19154 3.019799 TGGAGGTGTAGGACTCAGATC 57.980 52.381 0.00 0.00 35.45 2.75
7695 19155 2.312390 GGAGGTGTAGGACTCAGATCC 58.688 57.143 0.00 0.00 39.28 3.36
7696 19156 1.950909 GAGGTGTAGGACTCAGATCCG 59.049 57.143 0.00 0.00 44.22 4.18
7698 19158 2.175931 AGGTGTAGGACTCAGATCCGAT 59.824 50.000 0.00 0.00 44.22 4.18
7699 19159 2.294791 GGTGTAGGACTCAGATCCGATG 59.705 54.545 0.00 0.00 44.22 3.84
7700 19160 2.952978 GTGTAGGACTCAGATCCGATGT 59.047 50.000 0.00 0.00 44.22 3.06
7701 19161 3.003897 GTGTAGGACTCAGATCCGATGTC 59.996 52.174 0.00 0.00 44.22 3.06
7702 19162 1.698506 AGGACTCAGATCCGATGTCC 58.301 55.000 14.77 14.77 44.22 4.02
7703 19163 0.312416 GGACTCAGATCCGATGTCCG 59.688 60.000 10.10 0.00 37.93 4.79
7704 19164 0.318275 GACTCAGATCCGATGTCCGC 60.318 60.000 0.00 0.00 36.84 5.54
7705 19165 1.006805 CTCAGATCCGATGTCCGCC 60.007 63.158 0.00 0.00 36.84 6.13
7707 19167 1.115326 TCAGATCCGATGTCCGCCAT 61.115 55.000 0.00 0.00 36.84 4.40
7708 19168 0.947660 CAGATCCGATGTCCGCCATG 60.948 60.000 0.00 0.00 36.84 3.66
7709 19169 2.281070 ATCCGATGTCCGCCATGC 60.281 61.111 0.00 0.00 36.84 4.06
7710 19170 3.832237 ATCCGATGTCCGCCATGCC 62.832 63.158 0.00 0.00 36.84 4.40
7729 19189 3.967335 GAGATCGCCGGACGGGAG 61.967 72.222 5.05 4.75 43.89 4.30
7737 19197 4.760047 CGGACGGGAGCTTGGGTG 62.760 72.222 0.00 0.00 0.00 4.61
7738 19198 4.410400 GGACGGGAGCTTGGGTGG 62.410 72.222 0.00 0.00 0.00 4.61
7743 19203 4.785453 GGAGCTTGGGTGGCGGAG 62.785 72.222 0.00 0.00 34.52 4.63
7744 19204 4.021925 GAGCTTGGGTGGCGGAGT 62.022 66.667 0.00 0.00 34.52 3.85
7745 19205 4.335647 AGCTTGGGTGGCGGAGTG 62.336 66.667 0.00 0.00 34.52 3.51
7746 19206 4.329545 GCTTGGGTGGCGGAGTGA 62.330 66.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 6.235231 ACTAGATCCCATGTTGATACGTTT 57.765 37.500 0.00 0.00 0.00 3.60
84 85 9.906660 TTCAAAATGTTTATAGCTCAAATCGTT 57.093 25.926 0.00 0.00 0.00 3.85
311 3716 5.762711 CCCATATTGGTATGTTTCGATGACA 59.237 40.000 4.83 4.83 36.72 3.58
330 3735 5.455872 AGACCTTCGAAACTAGATCCCATA 58.544 41.667 0.00 0.00 0.00 2.74
476 5735 7.365462 CCTCTTTGGACACTAGCTACATGCT 62.365 48.000 0.00 0.00 46.85 3.79
482 5741 3.245658 ACTCCCTCTTTGGACACTAGCTA 60.246 47.826 0.00 0.00 38.35 3.32
514 5773 0.391661 TTTCTCTCCCTGTCGCATGC 60.392 55.000 7.91 7.91 0.00 4.06
515 5774 1.066573 ACTTTCTCTCCCTGTCGCATG 60.067 52.381 0.00 0.00 0.00 4.06
517 5776 1.919240 TACTTTCTCTCCCTGTCGCA 58.081 50.000 0.00 0.00 0.00 5.10
518 5777 2.815478 CATACTTTCTCTCCCTGTCGC 58.185 52.381 0.00 0.00 0.00 5.19
519 5778 2.796383 CGCATACTTTCTCTCCCTGTCG 60.796 54.545 0.00 0.00 0.00 4.35
520 5779 2.166664 ACGCATACTTTCTCTCCCTGTC 59.833 50.000 0.00 0.00 0.00 3.51
556 5838 7.013274 CCTTCCCTAATCGATCTTTAATTGCAA 59.987 37.037 0.00 0.00 0.00 4.08
569 5851 3.972133 TCAGTACACCTTCCCTAATCGA 58.028 45.455 0.00 0.00 0.00 3.59
626 5927 6.918022 CCTTGTGTGAATTAAAGTTGGACTTC 59.082 38.462 0.00 0.00 37.47 3.01
635 5936 6.817765 TTAGAGGCCTTGTGTGAATTAAAG 57.182 37.500 6.77 0.00 0.00 1.85
636 5937 7.775053 ATTTAGAGGCCTTGTGTGAATTAAA 57.225 32.000 6.77 2.30 0.00 1.52
637 5938 7.775053 AATTTAGAGGCCTTGTGTGAATTAA 57.225 32.000 6.77 0.00 0.00 1.40
638 5939 7.775053 AAATTTAGAGGCCTTGTGTGAATTA 57.225 32.000 6.77 0.00 0.00 1.40
639 5940 6.670695 AAATTTAGAGGCCTTGTGTGAATT 57.329 33.333 6.77 4.62 0.00 2.17
641 5942 5.596361 TGAAAATTTAGAGGCCTTGTGTGAA 59.404 36.000 6.77 0.00 0.00 3.18
643 5944 5.452078 TGAAAATTTAGAGGCCTTGTGTG 57.548 39.130 6.77 0.00 0.00 3.82
644 5945 5.362430 TGTTGAAAATTTAGAGGCCTTGTGT 59.638 36.000 6.77 0.00 0.00 3.72
645 5946 5.841810 TGTTGAAAATTTAGAGGCCTTGTG 58.158 37.500 6.77 0.00 0.00 3.33
656 5957 6.129062 CGCGGTGCTAAATTGTTGAAAATTTA 60.129 34.615 0.00 0.00 39.73 1.40
659 5960 3.672867 CGCGGTGCTAAATTGTTGAAAAT 59.327 39.130 0.00 0.00 0.00 1.82
678 5979 2.726691 CCAAAGAGCCGTGTACGCG 61.727 63.158 21.58 21.58 38.18 6.01
706 6011 1.063031 GCAAGGAAGCAAATTCGTGC 58.937 50.000 0.00 0.00 45.28 5.34
948 6269 2.602217 GCATCCACGATGGTTTATTCGC 60.602 50.000 3.94 0.00 40.10 4.70
1079 6400 1.303309 GGATTGGAACTGAGATGCGG 58.697 55.000 0.00 0.00 0.00 5.69
1493 6834 2.125106 AGCTTCCGATTCCACGCC 60.125 61.111 0.00 0.00 0.00 5.68
1580 6922 5.071653 TCAGGCATAGTATGTGGCAGAATTA 59.928 40.000 11.73 0.00 43.86 1.40
1720 7062 5.375655 ACTTCCCCCAAAATACTAGCCATAT 59.624 40.000 0.00 0.00 0.00 1.78
1721 7063 4.729881 ACTTCCCCCAAAATACTAGCCATA 59.270 41.667 0.00 0.00 0.00 2.74
1740 7082 4.755411 TCGGGTAATCATCTCACAACTTC 58.245 43.478 0.00 0.00 0.00 3.01
1746 7088 3.195661 GTGGTTCGGGTAATCATCTCAC 58.804 50.000 0.00 0.00 28.86 3.51
1814 7158 3.550820 TGCAAGTTTCCAAGCTTGTCTA 58.449 40.909 24.35 7.45 45.45 2.59
1818 7162 6.424509 TCAAATATTGCAAGTTTCCAAGCTTG 59.575 34.615 19.93 19.93 46.13 4.01
1917 7261 0.032952 GTAACCACTGGCGTGACTCA 59.967 55.000 10.33 0.00 43.97 3.41
1984 7328 3.131400 AGAACATTCTAGAGAAGACGGGC 59.869 47.826 0.00 0.00 37.48 6.13
2110 7454 0.828762 ATTGGGCTTGCTGTCTTGCA 60.829 50.000 0.00 0.00 41.65 4.08
2124 7468 0.109781 CCGCTTCAACGTCAATTGGG 60.110 55.000 5.42 0.64 0.00 4.12
2230 7574 0.036010 CGACCCCAGGGATGATATGC 60.036 60.000 7.25 0.00 38.96 3.14
2310 7654 0.745486 GCCTTCCATTTTGGGCATGC 60.745 55.000 9.90 9.90 43.59 4.06
2533 7877 2.381911 CACTTAATGAATGCTGGCCCT 58.618 47.619 0.00 0.00 0.00 5.19
2710 8054 6.822676 CAGAAGCTACAGGATTCTCTTCAAAT 59.177 38.462 3.67 0.00 46.23 2.32
2767 8111 3.172824 GTTCGAGTCAGGACGATCTTTC 58.827 50.000 0.00 0.00 38.30 2.62
3749 9097 4.286297 AGGTAGCTGCACTTAAACATCA 57.714 40.909 3.61 0.00 0.00 3.07
3999 9400 6.953520 TCAAAATCCCTTATATTGGCATAGGG 59.046 38.462 10.97 10.97 36.50 3.53
4061 9462 3.446516 GCTGAAGGAAGAAAGGCATGAAT 59.553 43.478 0.00 0.00 0.00 2.57
4717 10135 6.041979 AGTGCATTACCTCAAGAACCAAAATT 59.958 34.615 0.00 0.00 0.00 1.82
4803 10221 7.693969 AAAGACATCAAATTCCCTTCTGTAG 57.306 36.000 0.00 0.00 0.00 2.74
4900 12071 0.106519 GCCCAACTGCCCATGTCTAT 60.107 55.000 0.00 0.00 0.00 1.98
5085 12340 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
5254 12522 6.253727 GCACAGTGTATTGTAGCTTGTAGTAG 59.746 42.308 1.61 0.00 0.00 2.57
5296 12564 3.914426 ACCCATTGTGGCTAGTCTAAG 57.086 47.619 0.00 0.00 35.79 2.18
5297 12565 4.359105 ACTACCCATTGTGGCTAGTCTAA 58.641 43.478 0.00 0.00 35.79 2.10
5298 12566 3.990369 ACTACCCATTGTGGCTAGTCTA 58.010 45.455 0.00 0.00 35.79 2.59
5299 12567 2.834113 ACTACCCATTGTGGCTAGTCT 58.166 47.619 0.00 0.00 35.79 3.24
5300 12568 4.081309 TGTTACTACCCATTGTGGCTAGTC 60.081 45.833 7.13 0.00 35.79 2.59
5301 12569 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
5302 12570 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
5304 12572 4.719773 TCTATGTTACTACCCATTGTGGCT 59.280 41.667 0.00 0.00 35.79 4.75
5305 12573 5.031066 TCTATGTTACTACCCATTGTGGC 57.969 43.478 0.00 0.00 35.79 5.01
5306 12574 6.235231 ACTCTATGTTACTACCCATTGTGG 57.765 41.667 0.00 0.00 37.25 4.17
5307 12575 8.008513 ACTACTCTATGTTACTACCCATTGTG 57.991 38.462 0.00 0.00 0.00 3.33
5310 12578 9.705103 TGTTACTACTCTATGTTACTACCCATT 57.295 33.333 0.00 0.00 0.00 3.16
5311 12579 9.878737 ATGTTACTACTCTATGTTACTACCCAT 57.121 33.333 0.00 0.00 0.00 4.00
5312 12580 9.705103 AATGTTACTACTCTATGTTACTACCCA 57.295 33.333 0.00 0.00 0.00 4.51
5313 12581 9.962783 CAATGTTACTACTCTATGTTACTACCC 57.037 37.037 0.00 0.00 0.00 3.69
5315 12583 9.460906 GGCAATGTTACTACTCTATGTTACTAC 57.539 37.037 0.00 0.00 0.00 2.73
5316 12584 8.636213 GGGCAATGTTACTACTCTATGTTACTA 58.364 37.037 0.00 0.00 0.00 1.82
5317 12585 7.125204 TGGGCAATGTTACTACTCTATGTTACT 59.875 37.037 0.00 0.00 0.00 2.24
5318 12586 7.270047 TGGGCAATGTTACTACTCTATGTTAC 58.730 38.462 0.00 0.00 0.00 2.50
5320 12588 6.308015 TGGGCAATGTTACTACTCTATGTT 57.692 37.500 0.00 0.00 0.00 2.71
5321 12589 5.950544 TGGGCAATGTTACTACTCTATGT 57.049 39.130 0.00 0.00 0.00 2.29
5322 12590 6.791887 CATGGGCAATGTTACTACTCTATG 57.208 41.667 0.00 0.00 0.00 2.23
5335 12603 6.291377 ACATAGAGTAGTAACATGGGCAATG 58.709 40.000 0.00 0.00 42.48 2.82
5336 12604 6.500589 ACATAGAGTAGTAACATGGGCAAT 57.499 37.500 0.00 0.00 0.00 3.56
5337 12605 5.950544 ACATAGAGTAGTAACATGGGCAA 57.049 39.130 0.00 0.00 0.00 4.52
5341 12609 8.574737 GGGTAGTAACATAGAGTAGTAACATGG 58.425 40.741 0.00 0.00 0.00 3.66
5342 12610 8.574737 GGGGTAGTAACATAGAGTAGTAACATG 58.425 40.741 0.00 0.00 0.00 3.21
5344 12612 7.876371 AGGGGTAGTAACATAGAGTAGTAACA 58.124 38.462 0.00 0.00 0.00 2.41
5349 12617 9.669887 CACTATAGGGGTAGTAACATAGAGTAG 57.330 40.741 4.43 0.00 33.29 2.57
5352 12620 6.890814 CCCACTATAGGGGTAGTAACATAGAG 59.109 46.154 19.93 0.00 45.60 2.43
5353 12621 6.797707 CCCACTATAGGGGTAGTAACATAGA 58.202 44.000 19.93 0.00 45.60 1.98
5366 12634 8.407793 ACACATATGTTACTCCCCACTATAGGG 61.408 44.444 5.37 0.00 41.99 3.53
5367 12635 6.497259 ACACATATGTTACTCCCCACTATAGG 59.503 42.308 5.37 0.00 34.46 2.57
5368 12636 7.378966 CACACATATGTTACTCCCCACTATAG 58.621 42.308 5.37 0.00 36.72 1.31
5371 12639 4.407621 CCACACATATGTTACTCCCCACTA 59.592 45.833 5.37 0.00 36.72 2.74
5372 12640 3.199946 CCACACATATGTTACTCCCCACT 59.800 47.826 5.37 0.00 36.72 4.00
5373 12641 3.054655 ACCACACATATGTTACTCCCCAC 60.055 47.826 5.37 0.00 36.72 4.61
5374 12642 3.186283 ACCACACATATGTTACTCCCCA 58.814 45.455 5.37 0.00 36.72 4.96
5375 12643 3.926058 ACCACACATATGTTACTCCCC 57.074 47.619 5.37 0.00 36.72 4.81
5378 12646 6.315144 TGCATGTTACCACACATATGTTACTC 59.685 38.462 5.37 0.00 36.72 2.59
5379 12647 6.176896 TGCATGTTACCACACATATGTTACT 58.823 36.000 5.37 0.00 36.72 2.24
5380 12648 6.429791 TGCATGTTACCACACATATGTTAC 57.570 37.500 5.37 0.00 36.72 2.50
5381 12649 6.431234 TGTTGCATGTTACCACACATATGTTA 59.569 34.615 5.37 0.00 36.72 2.41
5382 12650 5.242615 TGTTGCATGTTACCACACATATGTT 59.757 36.000 5.37 0.00 36.72 2.71
5383 12651 4.764308 TGTTGCATGTTACCACACATATGT 59.236 37.500 1.41 1.41 40.80 2.29
5384 12652 5.094812 GTGTTGCATGTTACCACACATATG 58.905 41.667 10.02 0.00 35.51 1.78
5385 12653 5.009631 AGTGTTGCATGTTACCACACATAT 58.990 37.500 15.74 0.00 35.51 1.78
5386 12654 4.393834 AGTGTTGCATGTTACCACACATA 58.606 39.130 15.74 0.00 35.51 2.29
5387 12655 3.221771 AGTGTTGCATGTTACCACACAT 58.778 40.909 15.74 1.51 37.93 3.21
5388 12656 2.649190 AGTGTTGCATGTTACCACACA 58.351 42.857 15.74 0.00 35.03 3.72
5390 12658 3.282885 TGAAGTGTTGCATGTTACCACA 58.717 40.909 0.00 0.00 37.31 4.17
5391 12659 3.980646 TGAAGTGTTGCATGTTACCAC 57.019 42.857 0.00 0.00 0.00 4.16
5393 12661 9.289303 CTAATAAATGAAGTGTTGCATGTTACC 57.711 33.333 0.00 0.00 0.00 2.85
5394 12662 9.289303 CCTAATAAATGAAGTGTTGCATGTTAC 57.711 33.333 0.00 0.00 0.00 2.50
5395 12663 7.973388 GCCTAATAAATGAAGTGTTGCATGTTA 59.027 33.333 0.00 0.00 0.00 2.41
5398 12666 6.567050 AGCCTAATAAATGAAGTGTTGCATG 58.433 36.000 0.00 0.00 0.00 4.06
5399 12667 6.780457 AGCCTAATAAATGAAGTGTTGCAT 57.220 33.333 0.00 0.00 0.00 3.96
5413 12681 7.676043 AGGCAAGATGAGTCTATAGCCTAATAA 59.324 37.037 13.74 0.00 46.63 1.40
5414 12682 7.185565 AGGCAAGATGAGTCTATAGCCTAATA 58.814 38.462 13.74 0.00 46.63 0.98
5415 12683 6.022315 AGGCAAGATGAGTCTATAGCCTAAT 58.978 40.000 13.74 0.00 46.63 1.73
5417 12685 5.004361 AGGCAAGATGAGTCTATAGCCTA 57.996 43.478 13.74 0.00 46.63 3.93
5418 12686 3.855668 AGGCAAGATGAGTCTATAGCCT 58.144 45.455 11.05 11.05 45.15 4.58
5419 12687 4.039730 TCAAGGCAAGATGAGTCTATAGCC 59.960 45.833 0.00 0.00 42.62 3.93
5420 12688 5.207110 TCAAGGCAAGATGAGTCTATAGC 57.793 43.478 0.00 0.00 33.30 2.97
5421 12689 8.530311 ACATATCAAGGCAAGATGAGTCTATAG 58.470 37.037 0.00 0.00 33.30 1.31
5422 12690 8.309656 CACATATCAAGGCAAGATGAGTCTATA 58.690 37.037 2.43 0.00 33.30 1.31
5423 12691 7.160049 CACATATCAAGGCAAGATGAGTCTAT 58.840 38.462 2.43 0.00 33.30 1.98
5425 12693 5.104610 ACACATATCAAGGCAAGATGAGTCT 60.105 40.000 2.43 0.00 35.82 3.24
5427 12695 4.880120 CACACATATCAAGGCAAGATGAGT 59.120 41.667 2.43 0.00 0.00 3.41
5428 12696 5.121105 TCACACATATCAAGGCAAGATGAG 58.879 41.667 2.43 0.00 0.00 2.90
5429 12697 5.101648 TCACACATATCAAGGCAAGATGA 57.898 39.130 2.43 0.00 0.00 2.92
5433 12701 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
5435 12703 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
5437 12705 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
5444 12712 9.409918 ACTACTAGTATGAGTAACATCACACAT 57.590 33.333 2.33 0.00 40.07 3.21
5445 12713 8.803397 ACTACTAGTATGAGTAACATCACACA 57.197 34.615 2.33 0.00 40.07 3.72
5481 12830 3.944087 AGAAAGAGAGGCATGTGGTAAC 58.056 45.455 0.00 0.00 0.00 2.50
5482 12831 4.041567 TGAAGAAAGAGAGGCATGTGGTAA 59.958 41.667 0.00 0.00 0.00 2.85
5483 12832 3.582647 TGAAGAAAGAGAGGCATGTGGTA 59.417 43.478 0.00 0.00 0.00 3.25
5484 12833 2.373169 TGAAGAAAGAGAGGCATGTGGT 59.627 45.455 0.00 0.00 0.00 4.16
5485 12834 3.063510 TGAAGAAAGAGAGGCATGTGG 57.936 47.619 0.00 0.00 0.00 4.17
5486 12835 5.640189 AAATGAAGAAAGAGAGGCATGTG 57.360 39.130 0.00 0.00 0.00 3.21
5487 12836 7.630082 GCAATAAATGAAGAAAGAGAGGCATGT 60.630 37.037 0.00 0.00 0.00 3.21
5488 12837 6.696148 GCAATAAATGAAGAAAGAGAGGCATG 59.304 38.462 0.00 0.00 0.00 4.06
5489 12838 6.606395 AGCAATAAATGAAGAAAGAGAGGCAT 59.394 34.615 0.00 0.00 0.00 4.40
5490 12839 5.948162 AGCAATAAATGAAGAAAGAGAGGCA 59.052 36.000 0.00 0.00 0.00 4.75
5491 12840 6.448207 AGCAATAAATGAAGAAAGAGAGGC 57.552 37.500 0.00 0.00 0.00 4.70
5492 12841 6.750963 GCAAGCAATAAATGAAGAAAGAGAGG 59.249 38.462 0.00 0.00 0.00 3.69
5493 12842 6.750963 GGCAAGCAATAAATGAAGAAAGAGAG 59.249 38.462 0.00 0.00 0.00 3.20
5494 12843 6.209192 TGGCAAGCAATAAATGAAGAAAGAGA 59.791 34.615 0.00 0.00 0.00 3.10
5495 12844 6.309737 GTGGCAAGCAATAAATGAAGAAAGAG 59.690 38.462 0.00 0.00 0.00 2.85
5496 12845 6.158598 GTGGCAAGCAATAAATGAAGAAAGA 58.841 36.000 0.00 0.00 0.00 2.52
5497 12846 5.927689 TGTGGCAAGCAATAAATGAAGAAAG 59.072 36.000 0.00 0.00 0.00 2.62
5498 12847 5.851720 TGTGGCAAGCAATAAATGAAGAAA 58.148 33.333 0.00 0.00 0.00 2.52
5499 12848 5.465532 TGTGGCAAGCAATAAATGAAGAA 57.534 34.783 0.00 0.00 0.00 2.52
5500 12849 5.185442 TGATGTGGCAAGCAATAAATGAAGA 59.815 36.000 0.00 0.00 0.00 2.87
5501 12850 5.412640 TGATGTGGCAAGCAATAAATGAAG 58.587 37.500 0.00 0.00 0.00 3.02
5502 12851 5.402997 TGATGTGGCAAGCAATAAATGAA 57.597 34.783 0.00 0.00 0.00 2.57
5503 12852 5.361571 AGATGATGTGGCAAGCAATAAATGA 59.638 36.000 0.00 0.00 0.00 2.57
5504 12853 5.597806 AGATGATGTGGCAAGCAATAAATG 58.402 37.500 0.00 0.00 0.00 2.32
5505 12854 5.864418 AGATGATGTGGCAAGCAATAAAT 57.136 34.783 0.00 0.00 0.00 1.40
5506 12855 6.964807 ATAGATGATGTGGCAAGCAATAAA 57.035 33.333 0.00 0.00 0.00 1.40
5507 12856 6.964807 AATAGATGATGTGGCAAGCAATAA 57.035 33.333 0.00 0.00 0.00 1.40
5508 12857 6.964807 AAATAGATGATGTGGCAAGCAATA 57.035 33.333 0.00 0.00 0.00 1.90
5509 12858 5.864418 AAATAGATGATGTGGCAAGCAAT 57.136 34.783 0.00 0.00 0.00 3.56
5510 12859 5.664294 AAAATAGATGATGTGGCAAGCAA 57.336 34.783 0.00 0.00 0.00 3.91
5511 12860 6.774170 AGATAAAATAGATGATGTGGCAAGCA 59.226 34.615 0.00 0.00 0.00 3.91
5512 12861 7.211966 AGATAAAATAGATGATGTGGCAAGC 57.788 36.000 0.00 0.00 0.00 4.01
5513 12862 9.716531 TCTAGATAAAATAGATGATGTGGCAAG 57.283 33.333 0.00 0.00 0.00 4.01
5531 12880 9.642343 AGGTAGTAACATCACACATCTAGATAA 57.358 33.333 4.54 0.00 0.00 1.75
5533 12882 9.815306 ATAGGTAGTAACATCACACATCTAGAT 57.185 33.333 0.00 0.00 0.00 1.98
5534 12883 9.067986 CATAGGTAGTAACATCACACATCTAGA 57.932 37.037 0.00 0.00 0.00 2.43
5535 12884 8.851145 ACATAGGTAGTAACATCACACATCTAG 58.149 37.037 0.00 0.00 0.00 2.43
5536 12885 8.762481 ACATAGGTAGTAACATCACACATCTA 57.238 34.615 0.00 0.00 0.00 1.98
5537 12886 7.661536 ACATAGGTAGTAACATCACACATCT 57.338 36.000 0.00 0.00 0.00 2.90
5538 12887 9.245962 GTAACATAGGTAGTAACATCACACATC 57.754 37.037 0.00 0.00 0.00 3.06
5539 12888 8.978472 AGTAACATAGGTAGTAACATCACACAT 58.022 33.333 0.00 0.00 0.00 3.21
5540 12889 8.357290 AGTAACATAGGTAGTAACATCACACA 57.643 34.615 0.00 0.00 0.00 3.72
5541 12890 7.919621 GGAGTAACATAGGTAGTAACATCACAC 59.080 40.741 0.00 0.00 0.00 3.82
5542 12891 7.069085 GGGAGTAACATAGGTAGTAACATCACA 59.931 40.741 0.00 0.00 0.00 3.58
5543 12892 7.069085 TGGGAGTAACATAGGTAGTAACATCAC 59.931 40.741 0.00 0.00 0.00 3.06
5544 12893 7.127405 TGGGAGTAACATAGGTAGTAACATCA 58.873 38.462 0.00 0.00 0.00 3.07
5545 12894 7.592885 TGGGAGTAACATAGGTAGTAACATC 57.407 40.000 0.00 0.00 0.00 3.06
5546 12895 8.429641 CAATGGGAGTAACATAGGTAGTAACAT 58.570 37.037 0.00 0.00 0.00 2.71
5547 12896 7.400915 ACAATGGGAGTAACATAGGTAGTAACA 59.599 37.037 0.00 0.00 0.00 2.41
5548 12897 7.709613 CACAATGGGAGTAACATAGGTAGTAAC 59.290 40.741 0.00 0.00 0.00 2.50
5549 12898 7.147620 CCACAATGGGAGTAACATAGGTAGTAA 60.148 40.741 0.00 0.00 32.67 2.24
5550 12899 6.325545 CCACAATGGGAGTAACATAGGTAGTA 59.674 42.308 0.00 0.00 32.67 1.82
5551 12900 5.130477 CCACAATGGGAGTAACATAGGTAGT 59.870 44.000 0.00 0.00 32.67 2.73
5552 12901 5.611374 CCACAATGGGAGTAACATAGGTAG 58.389 45.833 0.00 0.00 32.67 3.18
5553 12902 5.623956 CCACAATGGGAGTAACATAGGTA 57.376 43.478 0.00 0.00 32.67 3.08
5554 12903 4.503714 CCACAATGGGAGTAACATAGGT 57.496 45.455 0.00 0.00 32.67 3.08
5567 12916 3.517901 TCCTGTAAGACTACCCACAATGG 59.482 47.826 0.00 0.00 34.07 3.16
5568 12917 4.819105 TCCTGTAAGACTACCCACAATG 57.181 45.455 0.00 0.00 34.07 2.82
5569 12918 6.388619 AATTCCTGTAAGACTACCCACAAT 57.611 37.500 0.00 0.00 34.07 2.71
5570 12919 5.836024 AATTCCTGTAAGACTACCCACAA 57.164 39.130 0.00 0.00 34.07 3.33
5571 12920 5.424252 CCTAATTCCTGTAAGACTACCCACA 59.576 44.000 0.00 0.00 34.07 4.17
5572 12921 5.659971 TCCTAATTCCTGTAAGACTACCCAC 59.340 44.000 0.00 0.00 34.07 4.61
5573 12922 5.845734 TCCTAATTCCTGTAAGACTACCCA 58.154 41.667 0.00 0.00 34.07 4.51
5574 12923 6.610425 TCTTCCTAATTCCTGTAAGACTACCC 59.390 42.308 0.00 0.00 34.07 3.69
5575 12924 7.657023 TCTTCCTAATTCCTGTAAGACTACC 57.343 40.000 0.00 0.00 34.07 3.18
5576 12925 8.145122 CCATCTTCCTAATTCCTGTAAGACTAC 58.855 40.741 0.00 0.00 34.07 2.73
5577 12926 8.065627 TCCATCTTCCTAATTCCTGTAAGACTA 58.934 37.037 0.00 0.00 34.07 2.59
5578 12927 6.903534 TCCATCTTCCTAATTCCTGTAAGACT 59.096 38.462 0.00 0.00 34.07 3.24
5579 12928 7.125792 TCCATCTTCCTAATTCCTGTAAGAC 57.874 40.000 0.00 0.00 34.07 3.01
5580 12929 7.937700 ATCCATCTTCCTAATTCCTGTAAGA 57.062 36.000 0.00 0.00 34.07 2.10
5846 13195 6.426980 TCATATTTCAAGTGCTTGTGCTAG 57.573 37.500 11.17 0.00 41.16 3.42
5938 13288 2.689471 AGTGTGAAAATCAACTGCAGCA 59.311 40.909 15.27 0.00 0.00 4.41
6012 13364 8.474025 ACTGTTTGATTTCTACACCAAATTTCA 58.526 29.630 0.00 0.00 32.16 2.69
6589 14885 2.002586 CTTTACATCGGGACAGCACAG 58.997 52.381 0.00 0.00 0.00 3.66
6675 15083 1.957177 TGGCGAAATTGCACCAGTTAA 59.043 42.857 0.00 0.00 36.28 2.01
6773 15322 3.192422 CCGCCTGTTCACAAATATCCAAA 59.808 43.478 0.00 0.00 0.00 3.28
6784 15333 0.317479 ACACTACTCCGCCTGTTCAC 59.683 55.000 0.00 0.00 0.00 3.18
6792 15562 0.242017 AACCACGTACACTACTCCGC 59.758 55.000 0.00 0.00 0.00 5.54
6802 15572 7.756722 TGATAGTTAAGCTTAGAAACCACGTAC 59.243 37.037 6.24 0.00 0.00 3.67
6804 15574 6.694447 TGATAGTTAAGCTTAGAAACCACGT 58.306 36.000 6.24 0.00 0.00 4.49
6805 15575 7.277981 ACATGATAGTTAAGCTTAGAAACCACG 59.722 37.037 6.24 0.00 0.00 4.94
6806 15576 8.494016 ACATGATAGTTAAGCTTAGAAACCAC 57.506 34.615 6.24 0.99 0.00 4.16
6808 15578 9.162764 TCAACATGATAGTTAAGCTTAGAAACC 57.837 33.333 6.24 0.00 0.00 3.27
6809 15579 9.974750 GTCAACATGATAGTTAAGCTTAGAAAC 57.025 33.333 6.24 4.39 0.00 2.78
6821 18233 2.540515 CGAGGCGTCAACATGATAGTT 58.459 47.619 7.26 0.00 0.00 2.24
6899 18314 1.512771 CGCGAACAAAGTGAAAGCAAC 59.487 47.619 0.00 0.00 0.00 4.17
6902 18317 1.268778 GGCGCGAACAAAGTGAAAGC 61.269 55.000 12.10 0.00 0.00 3.51
6903 18318 0.991770 CGGCGCGAACAAAGTGAAAG 60.992 55.000 12.10 0.00 0.00 2.62
6976 18398 8.270744 AGATTATTTGAGGTCTGAGTGCTTATT 58.729 33.333 0.00 0.00 0.00 1.40
6977 18399 7.800092 AGATTATTTGAGGTCTGAGTGCTTAT 58.200 34.615 0.00 0.00 0.00 1.73
6978 18400 7.124901 AGAGATTATTTGAGGTCTGAGTGCTTA 59.875 37.037 0.00 0.00 0.00 3.09
6979 18401 6.059787 AGATTATTTGAGGTCTGAGTGCTT 57.940 37.500 0.00 0.00 0.00 3.91
6980 18402 5.424895 AGAGATTATTTGAGGTCTGAGTGCT 59.575 40.000 0.00 0.00 0.00 4.40
6982 18404 7.555087 AGAAGAGATTATTTGAGGTCTGAGTG 58.445 38.462 0.00 0.00 0.00 3.51
6984 18406 8.690884 TGTAGAAGAGATTATTTGAGGTCTGAG 58.309 37.037 0.00 0.00 0.00 3.35
6985 18407 8.595362 TGTAGAAGAGATTATTTGAGGTCTGA 57.405 34.615 0.00 0.00 0.00 3.27
6989 18411 9.401058 CCAATTGTAGAAGAGATTATTTGAGGT 57.599 33.333 4.43 0.00 0.00 3.85
7033 18455 8.972262 TTTACGTTGCATGCAATATTTAAGAA 57.028 26.923 33.94 17.65 38.28 2.52
7034 18456 8.972262 TTTTACGTTGCATGCAATATTTAAGA 57.028 26.923 33.94 19.51 38.28 2.10
7035 18457 9.833894 GATTTTACGTTGCATGCAATATTTAAG 57.166 29.630 33.94 20.24 38.28 1.85
7040 18462 9.398170 GATTAGATTTTACGTTGCATGCAATAT 57.602 29.630 33.94 25.84 38.28 1.28
7045 18473 8.734030 GTTTAGATTAGATTTTACGTTGCATGC 58.266 33.333 11.82 11.82 0.00 4.06
7053 18481 8.473016 CGAGCTCTGTTTAGATTAGATTTTACG 58.527 37.037 12.85 0.00 31.21 3.18
7070 18498 1.302383 CGGAGTGAGACGAGCTCTGT 61.302 60.000 12.85 11.43 44.27 3.41
7072 18500 2.403378 GCGGAGTGAGACGAGCTCT 61.403 63.158 12.85 0.00 44.27 4.09
7096 18524 4.783621 GCTGGCCGCTGGACATGA 62.784 66.667 11.61 0.00 41.49 3.07
7111 18539 0.250901 ACATTTTGAGGGACGCAGCT 60.251 50.000 0.00 0.00 40.62 4.24
7127 18555 0.320771 GTCAGTGACCGGAGCAACAT 60.321 55.000 9.46 0.00 0.00 2.71
7141 18569 2.570752 TGTCCTACTCTACCTCGTCAGT 59.429 50.000 0.00 0.00 0.00 3.41
7182 18610 2.358737 GTGGCACCTTGAGTCCCG 60.359 66.667 6.29 0.00 0.00 5.14
7194 18622 4.408821 GCATGGGAGACGGTGGCA 62.409 66.667 0.00 0.00 0.00 4.92
7198 18626 0.617820 AAGTAGGCATGGGAGACGGT 60.618 55.000 0.00 0.00 0.00 4.83
7221 18650 1.064825 AGGTTCCGGACTCCAACAAT 58.935 50.000 22.10 3.43 0.00 2.71
7223 18652 0.395312 GAAGGTTCCGGACTCCAACA 59.605 55.000 22.10 0.00 0.00 3.33
7246 18675 2.583143 TGATCTCACGTCCACCGATAT 58.417 47.619 0.00 0.00 40.70 1.63
7248 18677 1.182667 TTGATCTCACGTCCACCGAT 58.817 50.000 0.00 0.00 40.70 4.18
7354 18812 1.153309 CCATCATGCGAGGCAGTGA 60.153 57.895 0.00 1.49 43.65 3.41
7373 18831 0.535780 ACGCATATGGCTGGATGTGG 60.536 55.000 4.56 1.32 41.67 4.17
7378 18836 2.280119 GCGACGCATATGGCTGGA 60.280 61.111 16.42 0.00 41.67 3.86
7382 18840 2.959599 TCGTGCGACGCATATGGC 60.960 61.111 27.23 11.61 41.91 4.40
7400 18860 2.040544 GGAGGTGAACGCATGGGTG 61.041 63.158 17.01 0.00 0.00 4.61
7401 18861 2.351276 GGAGGTGAACGCATGGGT 59.649 61.111 10.03 10.03 0.00 4.51
7460 18920 1.193644 GGTTCGTTTGGCGTTTGAAC 58.806 50.000 4.52 4.52 42.13 3.18
7465 18925 3.203412 TGCGGTTCGTTTGGCGTT 61.203 55.556 0.00 0.00 42.13 4.84
7486 18946 3.164269 ATGCTGCCTCGGGGTAGG 61.164 66.667 21.92 2.04 44.07 3.18
7491 18951 4.100084 TGTCCATGCTGCCTCGGG 62.100 66.667 0.00 0.00 0.00 5.14
7492 18952 2.821366 GTGTCCATGCTGCCTCGG 60.821 66.667 0.00 0.00 0.00 4.63
7493 18953 2.046988 TGTGTCCATGCTGCCTCG 60.047 61.111 0.00 0.00 0.00 4.63
7512 18972 2.514592 ACATGGATCCGCCGCAAG 60.515 61.111 7.39 0.00 40.66 4.01
7541 19001 3.132289 TCCACCGAGAATCTATTGTGTCC 59.868 47.826 5.84 0.00 0.00 4.02
7545 19005 4.030913 TCCTTCCACCGAGAATCTATTGT 58.969 43.478 0.00 0.00 0.00 2.71
7550 19010 2.104170 GACTCCTTCCACCGAGAATCT 58.896 52.381 0.00 0.00 0.00 2.40
7559 19019 2.182030 CGCTCGGACTCCTTCCAC 59.818 66.667 0.00 0.00 46.29 4.02
7560 19020 3.760035 GCGCTCGGACTCCTTCCA 61.760 66.667 0.00 0.00 46.29 3.53
7592 19052 2.581354 CACCGCTTCTGGGAGGAG 59.419 66.667 0.00 0.00 0.00 3.69
7608 19068 4.113815 CCATCCCCTTGCGCTCCA 62.114 66.667 9.73 0.00 0.00 3.86
7614 19074 0.548031 TGAGATGACCATCCCCTTGC 59.452 55.000 6.40 0.00 38.58 4.01
7615 19075 3.137446 GATGAGATGACCATCCCCTTG 57.863 52.381 6.40 0.00 38.58 3.61
7621 19081 2.707791 TCCCAAGGATGAGATGACCATC 59.292 50.000 1.90 1.90 39.61 3.51
7622 19082 2.441001 GTCCCAAGGATGAGATGACCAT 59.559 50.000 0.00 0.00 32.73 3.55
7623 19083 1.839994 GTCCCAAGGATGAGATGACCA 59.160 52.381 0.00 0.00 32.73 4.02
7625 19085 1.202580 CGGTCCCAAGGATGAGATGAC 60.203 57.143 0.00 0.00 32.73 3.06
7633 19093 1.995626 CCCACTCGGTCCCAAGGAT 60.996 63.158 0.00 0.00 32.73 3.24
7642 19102 3.063084 GAGCTCGTCCCACTCGGT 61.063 66.667 0.00 0.00 0.00 4.69
7646 19106 3.663815 ATCCGGAGCTCGTCCCACT 62.664 63.158 11.34 0.00 43.47 4.00
7655 19115 2.579873 CAAATCCATTGATCCGGAGCT 58.420 47.619 22.18 0.00 41.85 4.09
7656 19116 1.610522 CCAAATCCATTGATCCGGAGC 59.389 52.381 14.17 14.17 41.85 4.70
7658 19118 2.158623 CCTCCAAATCCATTGATCCGGA 60.159 50.000 6.61 6.61 41.85 5.14
7660 19120 2.620115 CACCTCCAAATCCATTGATCCG 59.380 50.000 0.00 0.00 41.85 4.18
7661 19121 3.635591 ACACCTCCAAATCCATTGATCC 58.364 45.455 0.00 0.00 41.85 3.36
7662 19122 4.823989 CCTACACCTCCAAATCCATTGATC 59.176 45.833 0.00 0.00 41.85 2.92
7663 19123 4.478317 TCCTACACCTCCAAATCCATTGAT 59.522 41.667 0.00 0.00 41.85 2.57
7664 19124 3.849574 TCCTACACCTCCAAATCCATTGA 59.150 43.478 0.00 0.00 41.85 2.57
7665 19125 3.947834 GTCCTACACCTCCAAATCCATTG 59.052 47.826 0.00 0.00 38.84 2.82
7666 19126 3.852578 AGTCCTACACCTCCAAATCCATT 59.147 43.478 0.00 0.00 0.00 3.16
7667 19127 3.456277 GAGTCCTACACCTCCAAATCCAT 59.544 47.826 0.00 0.00 0.00 3.41
7668 19128 2.838202 GAGTCCTACACCTCCAAATCCA 59.162 50.000 0.00 0.00 0.00 3.41
7670 19130 3.769844 TCTGAGTCCTACACCTCCAAATC 59.230 47.826 0.00 0.00 0.00 2.17
7672 19132 3.254093 TCTGAGTCCTACACCTCCAAA 57.746 47.619 0.00 0.00 0.00 3.28
7675 19135 2.312390 GGATCTGAGTCCTACACCTCC 58.688 57.143 0.00 0.00 35.32 4.30
7676 19136 1.950909 CGGATCTGAGTCCTACACCTC 59.049 57.143 0.00 0.00 36.07 3.85
7677 19137 1.564818 TCGGATCTGAGTCCTACACCT 59.435 52.381 0.00 0.00 36.07 4.00
7678 19138 2.054232 TCGGATCTGAGTCCTACACC 57.946 55.000 0.00 0.00 36.07 4.16
7680 19140 3.215151 GACATCGGATCTGAGTCCTACA 58.785 50.000 10.61 0.00 36.07 2.74
7682 19142 2.810767 CGGACATCGGATCTGAGTCCTA 60.811 54.545 30.16 6.30 45.03 2.94
7683 19143 1.698506 GGACATCGGATCTGAGTCCT 58.301 55.000 28.33 7.49 44.10 3.85
7684 19144 0.312416 CGGACATCGGATCTGAGTCC 59.688 60.000 27.07 27.07 44.05 3.85
7686 19146 1.736586 GCGGACATCGGATCTGAGT 59.263 57.895 10.61 8.20 39.69 3.41
7687 19147 1.006805 GGCGGACATCGGATCTGAG 60.007 63.158 10.61 5.08 39.69 3.35
7689 19149 0.947660 CATGGCGGACATCGGATCTG 60.948 60.000 0.00 0.00 37.84 2.90
7690 19150 1.368950 CATGGCGGACATCGGATCT 59.631 57.895 0.00 0.00 37.84 2.75
7691 19151 2.320587 GCATGGCGGACATCGGATC 61.321 63.158 0.00 0.00 37.84 3.36
7692 19152 2.281070 GCATGGCGGACATCGGAT 60.281 61.111 0.00 0.00 37.84 4.18
7721 19181 4.410400 CCACCCAAGCTCCCGTCC 62.410 72.222 0.00 0.00 0.00 4.79
7726 19186 4.785453 CTCCGCCACCCAAGCTCC 62.785 72.222 0.00 0.00 0.00 4.70
7729 19189 4.329545 TCACTCCGCCACCCAAGC 62.330 66.667 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.