Multiple sequence alignment - TraesCS2D01G200900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G200900 chr2D 100.000 4449 0 0 1 4449 152661882 152657434 0.000000e+00 8216.0
1 TraesCS2D01G200900 chr2D 93.103 87 5 1 246 332 11129747 11129662 4.670000e-25 126.0
2 TraesCS2D01G200900 chr2B 94.496 1508 56 13 1980 3462 210664696 210663191 0.000000e+00 2300.0
3 TraesCS2D01G200900 chr2B 94.080 777 35 7 601 1374 210666235 210665467 0.000000e+00 1170.0
4 TraesCS2D01G200900 chr2B 90.970 598 27 10 1385 1955 210665353 210664756 0.000000e+00 780.0
5 TraesCS2D01G200900 chr2B 81.155 329 52 7 7 328 139650116 139650441 5.710000e-64 255.0
6 TraesCS2D01G200900 chr2B 97.143 105 3 0 464 568 210666326 210666222 1.270000e-40 178.0
7 TraesCS2D01G200900 chr7D 97.776 989 15 5 3463 4449 566563886 566562903 0.000000e+00 1698.0
8 TraesCS2D01G200900 chr7D 97.475 990 20 4 3462 4449 618433810 618434796 0.000000e+00 1685.0
9 TraesCS2D01G200900 chr7D 96.169 261 10 0 1 261 12806143 12805883 1.140000e-115 427.0
10 TraesCS2D01G200900 chr7D 92.593 108 6 1 342 447 219883301 219883194 2.140000e-33 154.0
11 TraesCS2D01G200900 chrUn 97.684 993 10 5 3463 4449 100834255 100835240 0.000000e+00 1694.0
12 TraesCS2D01G200900 chr6D 97.919 913 12 5 3539 4449 407464059 407464966 0.000000e+00 1574.0
13 TraesCS2D01G200900 chr6D 80.339 295 50 8 29 319 82644566 82644856 2.690000e-52 217.0
14 TraesCS2D01G200900 chr6A 93.360 994 33 14 3462 4449 18840989 18840023 0.000000e+00 1439.0
15 TraesCS2D01G200900 chr6A 97.266 256 7 0 1 256 38758068 38757813 6.830000e-118 435.0
16 TraesCS2D01G200900 chr2A 93.625 753 38 7 2720 3463 148856825 148857576 0.000000e+00 1116.0
17 TraesCS2D01G200900 chr2A 92.133 750 28 16 1980 2727 148855714 148856434 0.000000e+00 1029.0
18 TraesCS2D01G200900 chr2A 90.415 772 32 12 613 1383 148854215 148854945 0.000000e+00 977.0
19 TraesCS2D01G200900 chr2A 93.027 588 22 8 1387 1955 148855067 148855654 0.000000e+00 841.0
20 TraesCS2D01G200900 chr2A 95.185 270 8 5 1 268 59572853 59572587 5.320000e-114 422.0
21 TraesCS2D01G200900 chr2A 82.222 270 43 4 3457 3724 43204919 43204653 1.240000e-55 228.0
22 TraesCS2D01G200900 chr2A 95.370 108 3 1 340 445 169625974 169626081 2.130000e-38 171.0
23 TraesCS2D01G200900 chr2A 93.407 91 5 1 462 551 148854125 148854215 2.790000e-27 134.0
24 TraesCS2D01G200900 chr3A 94.541 458 16 6 3994 4449 515729924 515729474 0.000000e+00 699.0
25 TraesCS2D01G200900 chr3A 91.909 309 22 3 3698 4004 515730535 515730228 3.180000e-116 429.0
26 TraesCS2D01G200900 chr3A 90.950 221 17 2 3461 3680 515730742 515730524 1.210000e-75 294.0
27 TraesCS2D01G200900 chr6B 91.686 421 32 2 3463 3883 19762410 19761993 8.300000e-162 580.0
28 TraesCS2D01G200900 chr6B 96.835 158 3 2 4291 4447 19761992 19761836 3.410000e-66 263.0
29 TraesCS2D01G200900 chr7A 98.016 252 5 0 1 252 620197293 620197042 5.280000e-119 438.0
30 TraesCS2D01G200900 chr7A 96.226 265 9 1 1 264 627156456 627156720 2.460000e-117 433.0
31 TraesCS2D01G200900 chr7A 78.344 314 51 9 29 328 626893075 626892765 2.110000e-43 187.0
32 TraesCS2D01G200900 chr5A 98.016 252 5 0 1 252 534990705 534990454 5.280000e-119 438.0
33 TraesCS2D01G200900 chr5A 89.247 93 10 0 236 328 134807567 134807475 2.810000e-22 117.0
34 TraesCS2D01G200900 chr4A 97.266 256 7 0 1 256 179068019 179067764 6.830000e-118 435.0
35 TraesCS2D01G200900 chr4A 95.149 268 11 2 1 267 573207571 573207305 5.320000e-114 422.0
36 TraesCS2D01G200900 chr4A 92.661 109 5 2 342 448 599504752 599504645 2.140000e-33 154.0
37 TraesCS2D01G200900 chr4A 97.297 37 0 1 4350 4385 728324030 728324066 1.340000e-05 62.1
38 TraesCS2D01G200900 chr4A 97.297 37 0 1 4350 4385 730715006 730714970 1.340000e-05 62.1
39 TraesCS2D01G200900 chr3B 97.992 249 5 0 1 249 423737236 423737484 2.460000e-117 433.0
40 TraesCS2D01G200900 chr4D 88.048 251 29 1 3464 3714 461371238 461371487 3.360000e-76 296.0
41 TraesCS2D01G200900 chr4D 94.231 104 3 2 344 445 56352063 56352165 5.960000e-34 156.0
42 TraesCS2D01G200900 chr1D 95.283 106 2 2 342 445 121098674 121098778 9.900000e-37 165.0
43 TraesCS2D01G200900 chr1D 93.578 109 5 2 342 448 295284183 295284075 1.280000e-35 161.0
44 TraesCS2D01G200900 chr1D 90.588 85 8 0 244 328 198418629 198418713 3.640000e-21 113.0
45 TraesCS2D01G200900 chr3D 94.340 106 3 2 342 445 181517198 181517094 4.610000e-35 159.0
46 TraesCS2D01G200900 chr3D 93.396 106 5 1 342 445 336590134 336590029 5.960000e-34 156.0
47 TraesCS2D01G200900 chr3D 93.396 106 5 1 342 445 432182153 432182258 5.960000e-34 156.0
48 TraesCS2D01G200900 chr3D 95.946 74 3 0 251 324 33294199 33294272 2.170000e-23 121.0
49 TraesCS2D01G200900 chr7B 77.987 159 35 0 166 324 745359790 745359632 2.830000e-17 100.0
50 TraesCS2D01G200900 chr7B 78.125 160 32 3 166 324 744695601 744695758 1.020000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G200900 chr2D 152657434 152661882 4448 True 8216.0 8216 100.000000 1 4449 1 chr2D.!!$R2 4448
1 TraesCS2D01G200900 chr2B 210663191 210666326 3135 True 1107.0 2300 94.172250 464 3462 4 chr2B.!!$R1 2998
2 TraesCS2D01G200900 chr7D 566562903 566563886 983 True 1698.0 1698 97.776000 3463 4449 1 chr7D.!!$R3 986
3 TraesCS2D01G200900 chr7D 618433810 618434796 986 False 1685.0 1685 97.475000 3462 4449 1 chr7D.!!$F1 987
4 TraesCS2D01G200900 chrUn 100834255 100835240 985 False 1694.0 1694 97.684000 3463 4449 1 chrUn.!!$F1 986
5 TraesCS2D01G200900 chr6D 407464059 407464966 907 False 1574.0 1574 97.919000 3539 4449 1 chr6D.!!$F2 910
6 TraesCS2D01G200900 chr6A 18840023 18840989 966 True 1439.0 1439 93.360000 3462 4449 1 chr6A.!!$R1 987
7 TraesCS2D01G200900 chr2A 148854125 148857576 3451 False 819.4 1116 92.521400 462 3463 5 chr2A.!!$F2 3001
8 TraesCS2D01G200900 chr3A 515729474 515730742 1268 True 474.0 699 92.466667 3461 4449 3 chr3A.!!$R1 988
9 TraesCS2D01G200900 chr6B 19761836 19762410 574 True 421.5 580 94.260500 3463 4447 2 chr6B.!!$R1 984

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.034756 CCGGAACATCACACACTCCA 59.965 55.0 0.00 0.00 0.00 3.86 F
254 255 0.107508 CCCATTGCGACCAGTCTCAT 60.108 55.0 0.00 0.00 0.00 2.90 F
684 702 0.411848 AATCCCCAATTCCCCGTTGT 59.588 50.0 0.00 0.00 0.00 3.32 F
1310 1336 0.546122 TTCGCCACTAGCCCATTCAT 59.454 50.0 0.00 0.00 38.78 2.57 F
1619 1771 1.110518 AGGTTAGCCGAGCTAGGAGC 61.111 60.0 18.16 5.59 42.34 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1612 1764 0.601311 GGGTATTGCTGCGCTCCTAG 60.601 60.000 9.73 0.0 0.00 3.02 R
1658 1810 4.213270 CAGAAGTTCGGTTTGCAACATCTA 59.787 41.667 0.00 0.0 30.68 1.98 R
2594 2820 1.210478 CCCATCTCAACCTACCACCAG 59.790 57.143 0.00 0.0 0.00 4.00 R
3047 3680 0.035317 TCGAAGAGCCACAGCACAAT 59.965 50.000 0.00 0.0 43.56 2.71 R
3548 4184 0.111045 CGTGTCGCGTATTGCAAACA 60.111 50.000 5.77 0.0 46.97 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.952935 CTTAGGAGTAACATCACACACTTC 57.047 41.667 0.00 0.00 0.00 3.01
24 25 4.955811 AGGAGTAACATCACACACTTCA 57.044 40.909 0.00 0.00 0.00 3.02
25 26 5.290493 AGGAGTAACATCACACACTTCAA 57.710 39.130 0.00 0.00 0.00 2.69
26 27 5.869579 AGGAGTAACATCACACACTTCAAT 58.130 37.500 0.00 0.00 0.00 2.57
27 28 7.004555 AGGAGTAACATCACACACTTCAATA 57.995 36.000 0.00 0.00 0.00 1.90
28 29 6.874134 AGGAGTAACATCACACACTTCAATAC 59.126 38.462 0.00 0.00 0.00 1.89
29 30 6.649141 GGAGTAACATCACACACTTCAATACA 59.351 38.462 0.00 0.00 0.00 2.29
30 31 7.172532 GGAGTAACATCACACACTTCAATACAA 59.827 37.037 0.00 0.00 0.00 2.41
31 32 7.861630 AGTAACATCACACACTTCAATACAAC 58.138 34.615 0.00 0.00 0.00 3.32
32 33 6.942532 AACATCACACACTTCAATACAACT 57.057 33.333 0.00 0.00 0.00 3.16
33 34 6.942532 ACATCACACACTTCAATACAACTT 57.057 33.333 0.00 0.00 0.00 2.66
34 35 7.333528 ACATCACACACTTCAATACAACTTT 57.666 32.000 0.00 0.00 0.00 2.66
35 36 7.195646 ACATCACACACTTCAATACAACTTTG 58.804 34.615 0.00 0.00 0.00 2.77
36 37 5.577835 TCACACACTTCAATACAACTTTGC 58.422 37.500 0.00 0.00 0.00 3.68
37 38 5.356751 TCACACACTTCAATACAACTTTGCT 59.643 36.000 0.00 0.00 0.00 3.91
38 39 6.035843 CACACACTTCAATACAACTTTGCTT 58.964 36.000 0.00 0.00 0.00 3.91
39 40 7.066404 TCACACACTTCAATACAACTTTGCTTA 59.934 33.333 0.00 0.00 0.00 3.09
40 41 7.862372 CACACACTTCAATACAACTTTGCTTAT 59.138 33.333 0.00 0.00 0.00 1.73
41 42 7.862372 ACACACTTCAATACAACTTTGCTTATG 59.138 33.333 0.00 0.00 0.00 1.90
42 43 7.862372 CACACTTCAATACAACTTTGCTTATGT 59.138 33.333 0.00 0.00 0.00 2.29
43 44 7.862372 ACACTTCAATACAACTTTGCTTATGTG 59.138 33.333 0.00 0.00 0.00 3.21
44 45 8.075574 CACTTCAATACAACTTTGCTTATGTGA 58.924 33.333 0.00 0.00 0.00 3.58
45 46 8.076178 ACTTCAATACAACTTTGCTTATGTGAC 58.924 33.333 0.00 0.00 0.00 3.67
46 47 7.503521 TCAATACAACTTTGCTTATGTGACA 57.496 32.000 0.00 0.00 0.00 3.58
47 48 7.359595 TCAATACAACTTTGCTTATGTGACAC 58.640 34.615 0.00 0.00 0.00 3.67
48 49 6.875948 ATACAACTTTGCTTATGTGACACA 57.124 33.333 11.41 11.41 0.00 3.72
49 50 5.772825 ACAACTTTGCTTATGTGACACAT 57.227 34.783 23.83 23.83 42.35 3.21
50 51 6.875948 ACAACTTTGCTTATGTGACACATA 57.124 33.333 21.76 21.76 39.88 2.29
51 52 7.452880 ACAACTTTGCTTATGTGACACATAT 57.547 32.000 25.12 7.93 40.41 1.78
52 53 7.885297 ACAACTTTGCTTATGTGACACATATT 58.115 30.769 25.12 13.81 40.41 1.28
53 54 8.359642 ACAACTTTGCTTATGTGACACATATTT 58.640 29.630 25.12 6.87 40.41 1.40
54 55 9.838975 CAACTTTGCTTATGTGACACATATTTA 57.161 29.630 25.12 12.38 40.41 1.40
66 67 9.591792 TGTGACACATATTTAATGAAGAGAGAG 57.408 33.333 3.56 0.00 0.00 3.20
67 68 9.039870 GTGACACATATTTAATGAAGAGAGAGG 57.960 37.037 0.00 0.00 0.00 3.69
68 69 8.762645 TGACACATATTTAATGAAGAGAGAGGT 58.237 33.333 0.00 0.00 0.00 3.85
69 70 8.954950 ACACATATTTAATGAAGAGAGAGGTG 57.045 34.615 0.00 0.00 0.00 4.00
70 71 7.497249 ACACATATTTAATGAAGAGAGAGGTGC 59.503 37.037 0.00 0.00 0.00 5.01
71 72 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
72 73 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
73 74 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
74 75 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
75 76 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
76 77 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
77 78 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
78 79 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
79 80 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
80 81 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
81 82 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
82 83 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
83 84 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
100 101 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
101 102 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
102 103 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
103 104 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
104 105 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
105 106 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
106 107 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
107 108 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
108 109 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
109 110 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
110 111 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
111 112 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
112 113 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
113 114 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
114 115 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
115 116 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
116 117 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
117 118 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
118 119 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
119 120 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
120 121 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
121 122 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
122 123 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
123 124 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
124 125 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
125 126 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
126 127 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
127 128 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
128 129 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
129 130 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
130 131 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
131 132 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
132 133 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
133 134 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
134 135 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
135 136 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
154 155 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
155 156 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
156 157 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
157 158 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
158 159 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
159 160 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
160 161 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
161 162 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
162 163 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
163 164 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
164 165 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
165 166 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
166 167 5.262588 TCGTTGCATGACACTACATAGAT 57.737 39.130 0.00 0.00 0.00 1.98
167 168 5.043248 TCGTTGCATGACACTACATAGATG 58.957 41.667 0.00 0.00 0.00 2.90
168 169 4.805719 CGTTGCATGACACTACATAGATGT 59.194 41.667 0.00 0.08 44.48 3.06
169 170 5.291858 CGTTGCATGACACTACATAGATGTT 59.708 40.000 0.00 0.00 41.97 2.71
170 171 6.508563 CGTTGCATGACACTACATAGATGTTC 60.509 42.308 0.00 0.00 41.97 3.18
171 172 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
172 173 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
173 174 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
174 175 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
175 176 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
176 177 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
177 178 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
178 179 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
179 180 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
180 181 6.776116 CACTACATAGATGTTCCTACCCACTA 59.224 42.308 0.00 0.00 41.97 2.74
181 182 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
182 183 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
183 184 5.544176 ACATAGATGTTCCTACCCACTATGG 59.456 44.000 0.81 0.00 37.90 2.74
184 185 4.280789 AGATGTTCCTACCCACTATGGA 57.719 45.455 0.00 0.00 40.96 3.41
185 186 4.227197 AGATGTTCCTACCCACTATGGAG 58.773 47.826 0.00 0.00 40.96 3.86
186 187 2.759355 TGTTCCTACCCACTATGGAGG 58.241 52.381 0.00 0.00 40.96 4.30
187 188 2.045326 TGTTCCTACCCACTATGGAGGT 59.955 50.000 0.00 1.66 40.96 3.85
188 189 3.272818 TGTTCCTACCCACTATGGAGGTA 59.727 47.826 0.00 3.53 40.96 3.08
197 198 9.629878 CTACCCACTATGGAGGTAGTAATATAG 57.370 40.741 16.50 0.00 45.39 1.31
198 199 8.009242 ACCCACTATGGAGGTAGTAATATAGT 57.991 38.462 0.00 0.00 40.96 2.12
199 200 8.114743 ACCCACTATGGAGGTAGTAATATAGTC 58.885 40.741 0.00 0.00 40.96 2.59
200 201 8.337739 CCCACTATGGAGGTAGTAATATAGTCT 58.662 40.741 0.00 0.00 40.96 3.24
205 206 8.712168 ATGGAGGTAGTAATATAGTCTAGGGA 57.288 38.462 0.00 0.00 0.00 4.20
206 207 8.529952 TGGAGGTAGTAATATAGTCTAGGGAA 57.470 38.462 0.00 0.00 0.00 3.97
207 208 8.613034 TGGAGGTAGTAATATAGTCTAGGGAAG 58.387 40.741 0.00 0.00 0.00 3.46
208 209 8.613923 GGAGGTAGTAATATAGTCTAGGGAAGT 58.386 40.741 0.00 0.00 0.00 3.01
209 210 9.452287 GAGGTAGTAATATAGTCTAGGGAAGTG 57.548 40.741 0.00 0.00 0.00 3.16
210 211 8.957926 AGGTAGTAATATAGTCTAGGGAAGTGT 58.042 37.037 0.00 0.00 0.00 3.55
211 212 9.012161 GGTAGTAATATAGTCTAGGGAAGTGTG 57.988 40.741 0.00 0.00 0.00 3.82
212 213 9.571816 GTAGTAATATAGTCTAGGGAAGTGTGT 57.428 37.037 0.00 0.00 0.00 3.72
217 218 9.490083 AATATAGTCTAGGGAAGTGTGTAAGTT 57.510 33.333 0.00 0.00 0.00 2.66
219 220 6.587206 AGTCTAGGGAAGTGTGTAAGTTAC 57.413 41.667 6.06 6.06 0.00 2.50
220 221 6.313324 AGTCTAGGGAAGTGTGTAAGTTACT 58.687 40.000 14.00 0.00 0.00 2.24
221 222 7.465116 AGTCTAGGGAAGTGTGTAAGTTACTA 58.535 38.462 14.00 1.06 0.00 1.82
222 223 7.611079 AGTCTAGGGAAGTGTGTAAGTTACTAG 59.389 40.741 14.00 4.64 33.84 2.57
223 224 7.609532 GTCTAGGGAAGTGTGTAAGTTACTAGA 59.390 40.741 14.00 6.66 36.50 2.43
224 225 8.334734 TCTAGGGAAGTGTGTAAGTTACTAGAT 58.665 37.037 14.00 0.00 35.27 1.98
225 226 7.793948 AGGGAAGTGTGTAAGTTACTAGATT 57.206 36.000 14.00 4.61 0.00 2.40
226 227 8.890410 AGGGAAGTGTGTAAGTTACTAGATTA 57.110 34.615 14.00 0.00 0.00 1.75
227 228 9.490083 AGGGAAGTGTGTAAGTTACTAGATTAT 57.510 33.333 14.00 0.00 0.00 1.28
228 229 9.530633 GGGAAGTGTGTAAGTTACTAGATTATG 57.469 37.037 14.00 0.00 0.00 1.90
236 237 9.595823 TGTAAGTTACTAGATTATGTTCTTGCC 57.404 33.333 14.00 0.00 0.00 4.52
237 238 9.043079 GTAAGTTACTAGATTATGTTCTTGCCC 57.957 37.037 5.75 0.00 0.00 5.36
238 239 7.195374 AGTTACTAGATTATGTTCTTGCCCA 57.805 36.000 0.00 0.00 0.00 5.36
239 240 7.806180 AGTTACTAGATTATGTTCTTGCCCAT 58.194 34.615 0.00 0.00 0.00 4.00
240 241 8.275040 AGTTACTAGATTATGTTCTTGCCCATT 58.725 33.333 0.00 0.00 0.00 3.16
241 242 6.949352 ACTAGATTATGTTCTTGCCCATTG 57.051 37.500 0.00 0.00 0.00 2.82
242 243 4.660789 AGATTATGTTCTTGCCCATTGC 57.339 40.909 0.00 0.00 41.77 3.56
243 244 2.937469 TTATGTTCTTGCCCATTGCG 57.063 45.000 0.00 0.00 45.60 4.85
244 245 2.121291 TATGTTCTTGCCCATTGCGA 57.879 45.000 0.00 0.00 45.60 5.10
245 246 0.527565 ATGTTCTTGCCCATTGCGAC 59.472 50.000 0.00 0.00 45.60 5.19
246 247 1.212751 GTTCTTGCCCATTGCGACC 59.787 57.895 0.00 0.00 45.60 4.79
247 248 1.228398 TTCTTGCCCATTGCGACCA 60.228 52.632 0.00 0.00 45.60 4.02
248 249 1.243342 TTCTTGCCCATTGCGACCAG 61.243 55.000 0.00 0.00 45.60 4.00
249 250 1.973281 CTTGCCCATTGCGACCAGT 60.973 57.895 0.00 0.00 45.60 4.00
250 251 1.926511 CTTGCCCATTGCGACCAGTC 61.927 60.000 0.00 0.00 45.60 3.51
251 252 2.045926 GCCCATTGCGACCAGTCT 60.046 61.111 0.00 0.00 0.00 3.24
252 253 2.109126 GCCCATTGCGACCAGTCTC 61.109 63.158 0.00 0.00 0.00 3.36
253 254 1.296392 CCCATTGCGACCAGTCTCA 59.704 57.895 0.00 0.00 0.00 3.27
254 255 0.107508 CCCATTGCGACCAGTCTCAT 60.108 55.000 0.00 0.00 0.00 2.90
255 256 1.138859 CCCATTGCGACCAGTCTCATA 59.861 52.381 0.00 0.00 0.00 2.15
256 257 2.205074 CCATTGCGACCAGTCTCATAC 58.795 52.381 0.00 0.00 0.00 2.39
257 258 2.159043 CCATTGCGACCAGTCTCATACT 60.159 50.000 0.00 0.00 39.81 2.12
258 259 3.068165 CCATTGCGACCAGTCTCATACTA 59.932 47.826 0.00 0.00 35.76 1.82
259 260 3.777465 TTGCGACCAGTCTCATACTAC 57.223 47.619 0.00 0.00 35.76 2.73
260 261 3.000684 TGCGACCAGTCTCATACTACT 57.999 47.619 0.00 0.00 35.76 2.57
261 262 4.146745 TGCGACCAGTCTCATACTACTA 57.853 45.455 0.00 0.00 35.76 1.82
262 263 4.127907 TGCGACCAGTCTCATACTACTAG 58.872 47.826 0.00 0.00 35.76 2.57
263 264 4.128643 GCGACCAGTCTCATACTACTAGT 58.871 47.826 0.00 0.00 35.76 2.57
264 265 5.163374 TGCGACCAGTCTCATACTACTAGTA 60.163 44.000 1.89 1.89 35.76 1.82
265 266 5.757320 GCGACCAGTCTCATACTACTAGTAA 59.243 44.000 3.76 0.00 35.76 2.24
266 267 6.292811 GCGACCAGTCTCATACTACTAGTAAC 60.293 46.154 3.76 0.00 35.76 2.50
267 268 6.985645 CGACCAGTCTCATACTACTAGTAACT 59.014 42.308 3.76 0.00 35.76 2.24
268 269 8.140628 CGACCAGTCTCATACTACTAGTAACTA 58.859 40.741 3.76 0.00 35.76 2.24
269 270 9.480053 GACCAGTCTCATACTACTAGTAACTAG 57.520 40.741 3.76 0.00 36.88 2.57
270 271 7.933033 ACCAGTCTCATACTACTAGTAACTAGC 59.067 40.741 3.76 0.00 35.36 3.42
271 272 8.152246 CCAGTCTCATACTACTAGTAACTAGCT 58.848 40.741 3.76 0.00 35.36 3.32
316 317 6.724694 TTTTCATTTATTGCTTGCCACATC 57.275 33.333 0.00 0.00 0.00 3.06
317 318 5.402997 TTCATTTATTGCTTGCCACATCA 57.597 34.783 0.00 0.00 0.00 3.07
318 319 5.601583 TCATTTATTGCTTGCCACATCAT 57.398 34.783 0.00 0.00 0.00 2.45
319 320 6.712179 TCATTTATTGCTTGCCACATCATA 57.288 33.333 0.00 0.00 0.00 2.15
320 321 7.292713 TCATTTATTGCTTGCCACATCATAT 57.707 32.000 0.00 0.00 0.00 1.78
321 322 8.406730 TCATTTATTGCTTGCCACATCATATA 57.593 30.769 0.00 0.00 0.00 0.86
322 323 9.027202 TCATTTATTGCTTGCCACATCATATAT 57.973 29.630 0.00 0.00 0.00 0.86
323 324 9.647797 CATTTATTGCTTGCCACATCATATATT 57.352 29.630 0.00 0.00 0.00 1.28
324 325 9.865321 ATTTATTGCTTGCCACATCATATATTC 57.135 29.630 0.00 0.00 0.00 1.75
325 326 8.640063 TTATTGCTTGCCACATCATATATTCT 57.360 30.769 0.00 0.00 0.00 2.40
326 327 9.737844 TTATTGCTTGCCACATCATATATTCTA 57.262 29.630 0.00 0.00 0.00 2.10
327 328 8.818622 ATTGCTTGCCACATCATATATTCTAT 57.181 30.769 0.00 0.00 0.00 1.98
328 329 7.619964 TGCTTGCCACATCATATATTCTATG 57.380 36.000 0.00 0.00 0.00 2.23
329 330 7.170277 TGCTTGCCACATCATATATTCTATGT 58.830 34.615 1.10 1.10 32.91 2.29
330 331 7.666804 TGCTTGCCACATCATATATTCTATGTT 59.333 33.333 3.45 0.00 30.32 2.71
331 332 9.166173 GCTTGCCACATCATATATTCTATGTTA 57.834 33.333 3.45 0.00 30.32 2.41
334 335 9.875691 TGCCACATCATATATTCTATGTTACTC 57.124 33.333 3.45 0.00 30.32 2.59
335 336 9.319143 GCCACATCATATATTCTATGTTACTCC 57.681 37.037 3.45 0.00 30.32 3.85
336 337 9.823647 CCACATCATATATTCTATGTTACTCCC 57.176 37.037 3.45 0.00 30.32 4.30
337 338 9.823647 CACATCATATATTCTATGTTACTCCCC 57.176 37.037 3.45 0.00 30.32 4.81
338 339 9.560860 ACATCATATATTCTATGTTACTCCCCA 57.439 33.333 1.10 0.00 0.00 4.96
339 340 9.823647 CATCATATATTCTATGTTACTCCCCAC 57.176 37.037 0.00 0.00 0.00 4.61
340 341 9.790297 ATCATATATTCTATGTTACTCCCCACT 57.210 33.333 0.00 0.00 0.00 4.00
341 342 9.615660 TCATATATTCTATGTTACTCCCCACTT 57.384 33.333 0.00 0.00 0.00 3.16
352 353 8.801882 TGTTACTCCCCACTTAATAAATGAAG 57.198 34.615 0.00 0.00 0.00 3.02
353 354 8.387813 TGTTACTCCCCACTTAATAAATGAAGT 58.612 33.333 0.00 0.00 36.31 3.01
368 369 9.801873 AATAAATGAAGTGTTGCATATTACCAC 57.198 29.630 0.00 0.00 0.00 4.16
369 370 6.832520 AATGAAGTGTTGCATATTACCACA 57.167 33.333 0.00 0.00 0.00 4.17
370 371 7.408756 AATGAAGTGTTGCATATTACCACAT 57.591 32.000 0.00 0.00 0.00 3.21
371 372 8.518430 AATGAAGTGTTGCATATTACCACATA 57.482 30.769 0.00 0.00 0.00 2.29
372 373 8.696043 ATGAAGTGTTGCATATTACCACATAT 57.304 30.769 0.00 0.00 0.00 1.78
373 374 7.929159 TGAAGTGTTGCATATTACCACATATG 58.071 34.615 0.00 0.00 39.33 1.78
374 375 7.555914 TGAAGTGTTGCATATTACCACATATGT 59.444 33.333 1.41 1.41 38.79 2.29
375 376 7.880160 AGTGTTGCATATTACCACATATGTT 57.120 32.000 5.37 0.00 38.79 2.71
376 377 8.972458 AGTGTTGCATATTACCACATATGTTA 57.028 30.769 5.37 0.00 38.79 2.41
377 378 8.836413 AGTGTTGCATATTACCACATATGTTAC 58.164 33.333 5.37 3.01 38.79 2.50
378 379 8.836413 GTGTTGCATATTACCACATATGTTACT 58.164 33.333 5.37 0.00 38.79 2.24
379 380 9.051679 TGTTGCATATTACCACATATGTTACTC 57.948 33.333 5.37 0.00 38.79 2.59
380 381 8.504005 GTTGCATATTACCACATATGTTACTCC 58.496 37.037 5.37 0.00 38.79 3.85
381 382 7.165485 TGCATATTACCACATATGTTACTCCC 58.835 38.462 5.37 0.00 38.79 4.30
382 383 6.598064 GCATATTACCACATATGTTACTCCCC 59.402 42.308 5.37 0.00 38.79 4.81
383 384 7.685481 CATATTACCACATATGTTACTCCCCA 58.315 38.462 5.37 0.00 33.86 4.96
384 385 3.926058 ACCACATATGTTACTCCCCAC 57.074 47.619 5.37 0.00 0.00 4.61
385 386 3.460825 ACCACATATGTTACTCCCCACT 58.539 45.455 5.37 0.00 0.00 4.00
386 387 4.627015 ACCACATATGTTACTCCCCACTA 58.373 43.478 5.37 0.00 0.00 2.74
387 388 5.224441 ACCACATATGTTACTCCCCACTAT 58.776 41.667 5.37 0.00 0.00 2.12
388 389 6.387127 ACCACATATGTTACTCCCCACTATA 58.613 40.000 5.37 0.00 0.00 1.31
389 390 6.497259 ACCACATATGTTACTCCCCACTATAG 59.503 42.308 5.37 0.00 0.00 1.31
390 391 6.724441 CCACATATGTTACTCCCCACTATAGA 59.276 42.308 5.37 0.00 0.00 1.98
391 392 7.093727 CCACATATGTTACTCCCCACTATAGAG 60.094 44.444 5.37 0.00 0.00 2.43
392 393 7.670140 CACATATGTTACTCCCCACTATAGAGA 59.330 40.741 5.37 0.00 0.00 3.10
393 394 8.402683 ACATATGTTACTCCCCACTATAGAGAT 58.597 37.037 6.78 0.00 0.00 2.75
394 395 9.922477 CATATGTTACTCCCCACTATAGAGATA 57.078 37.037 6.78 0.00 0.00 1.98
397 398 8.515927 TGTTACTCCCCACTATAGAGATAGTA 57.484 38.462 6.78 4.79 45.42 1.82
398 399 8.952602 TGTTACTCCCCACTATAGAGATAGTAA 58.047 37.037 6.78 9.89 45.42 2.24
399 400 9.978336 GTTACTCCCCACTATAGAGATAGTAAT 57.022 37.037 6.78 0.00 45.42 1.89
436 437 8.050778 ACATGTTTATGTTACTACCCATTGTG 57.949 34.615 0.00 0.00 45.01 3.33
437 438 7.122055 ACATGTTTATGTTACTACCCATTGTGG 59.878 37.037 0.00 0.00 45.01 4.17
438 439 5.416326 TGTTTATGTTACTACCCATTGTGGC 59.584 40.000 0.00 0.00 35.79 5.01
439 440 5.444744 TTATGTTACTACCCATTGTGGCT 57.555 39.130 0.00 0.00 35.79 4.75
440 441 6.563037 TTATGTTACTACCCATTGTGGCTA 57.437 37.500 0.00 0.00 35.79 3.93
441 442 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
442 443 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
443 444 4.081309 TGTTACTACCCATTGTGGCTAGTC 60.081 45.833 7.13 0.00 35.79 2.59
444 445 2.834113 ACTACCCATTGTGGCTAGTCT 58.166 47.619 0.00 0.00 35.79 3.24
445 446 3.990369 ACTACCCATTGTGGCTAGTCTA 58.010 45.455 0.00 0.00 35.79 2.59
446 447 4.359105 ACTACCCATTGTGGCTAGTCTAA 58.641 43.478 0.00 0.00 35.79 2.10
447 448 4.781087 ACTACCCATTGTGGCTAGTCTAAA 59.219 41.667 0.00 0.00 35.79 1.85
448 449 3.951663 ACCCATTGTGGCTAGTCTAAAC 58.048 45.455 0.00 0.00 35.79 2.01
449 450 3.587506 ACCCATTGTGGCTAGTCTAAACT 59.412 43.478 0.00 0.00 35.79 2.66
450 451 4.192317 CCCATTGTGGCTAGTCTAAACTC 58.808 47.826 0.00 0.00 35.79 3.01
451 452 4.080863 CCCATTGTGGCTAGTCTAAACTCT 60.081 45.833 0.00 0.00 35.79 3.24
452 453 5.112686 CCATTGTGGCTAGTCTAAACTCTC 58.887 45.833 0.00 0.00 36.92 3.20
453 454 5.337571 CCATTGTGGCTAGTCTAAACTCTCA 60.338 44.000 0.00 0.00 36.92 3.27
454 455 5.392767 TTGTGGCTAGTCTAAACTCTCAG 57.607 43.478 0.00 0.00 36.92 3.35
455 456 3.193691 TGTGGCTAGTCTAAACTCTCAGC 59.806 47.826 0.00 0.00 36.92 4.26
456 457 3.446310 GGCTAGTCTAAACTCTCAGCC 57.554 52.381 2.94 2.94 43.85 4.85
457 458 2.101750 GGCTAGTCTAAACTCTCAGCCC 59.898 54.545 6.59 0.00 44.17 5.19
458 459 2.761208 GCTAGTCTAAACTCTCAGCCCA 59.239 50.000 0.00 0.00 36.92 5.36
459 460 3.181480 GCTAGTCTAAACTCTCAGCCCAG 60.181 52.174 0.00 0.00 36.92 4.45
460 461 1.552792 AGTCTAAACTCTCAGCCCAGC 59.447 52.381 0.00 0.00 0.00 4.85
541 543 6.373759 AGAGTTTTACCAAGTCCTTTTCCAT 58.626 36.000 0.00 0.00 0.00 3.41
550 552 5.200483 CAAGTCCTTTTCCATAATGGGCTA 58.800 41.667 0.00 0.00 38.32 3.93
551 553 5.053978 AGTCCTTTTCCATAATGGGCTAG 57.946 43.478 0.00 0.00 38.32 3.42
552 554 3.570125 GTCCTTTTCCATAATGGGCTAGC 59.430 47.826 6.04 6.04 38.32 3.42
553 555 3.463329 TCCTTTTCCATAATGGGCTAGCT 59.537 43.478 15.72 0.00 38.32 3.32
554 556 4.663120 TCCTTTTCCATAATGGGCTAGCTA 59.337 41.667 15.72 4.59 38.32 3.32
555 557 5.006386 CCTTTTCCATAATGGGCTAGCTAG 58.994 45.833 16.84 16.84 38.32 3.42
570 572 1.813513 GCTAGCTGAGCCACAAAAGA 58.186 50.000 7.70 0.00 46.41 2.52
571 573 2.363683 GCTAGCTGAGCCACAAAAGAT 58.636 47.619 7.70 0.00 46.41 2.40
572 574 2.751806 GCTAGCTGAGCCACAAAAGATT 59.248 45.455 7.70 0.00 46.41 2.40
573 575 3.181502 GCTAGCTGAGCCACAAAAGATTC 60.182 47.826 7.70 0.00 46.41 2.52
574 576 3.151912 AGCTGAGCCACAAAAGATTCT 57.848 42.857 0.00 0.00 0.00 2.40
575 577 3.080319 AGCTGAGCCACAAAAGATTCTC 58.920 45.455 0.00 0.00 0.00 2.87
576 578 2.816087 GCTGAGCCACAAAAGATTCTCA 59.184 45.455 0.00 0.00 0.00 3.27
577 579 3.254166 GCTGAGCCACAAAAGATTCTCAA 59.746 43.478 0.00 0.00 31.24 3.02
578 580 4.261741 GCTGAGCCACAAAAGATTCTCAAA 60.262 41.667 0.00 0.00 31.24 2.69
579 581 5.737063 GCTGAGCCACAAAAGATTCTCAAAA 60.737 40.000 0.00 0.00 31.24 2.44
580 582 6.219417 TGAGCCACAAAAGATTCTCAAAAA 57.781 33.333 0.00 0.00 0.00 1.94
607 609 5.687770 AAAAGAAGAAGAAGAAGCTGAGC 57.312 39.130 0.00 0.00 0.00 4.26
608 610 3.333029 AGAAGAAGAAGAAGCTGAGCC 57.667 47.619 0.00 0.00 0.00 4.70
609 611 2.636893 AGAAGAAGAAGAAGCTGAGCCA 59.363 45.455 0.00 0.00 0.00 4.75
610 612 2.470983 AGAAGAAGAAGCTGAGCCAC 57.529 50.000 0.00 0.00 0.00 5.01
611 613 1.696336 AGAAGAAGAAGCTGAGCCACA 59.304 47.619 0.00 0.00 0.00 4.17
652 670 4.056125 GCCAGCCGCCAAAGGAAC 62.056 66.667 0.00 0.00 0.00 3.62
653 671 3.373565 CCAGCCGCCAAAGGAACC 61.374 66.667 0.00 0.00 0.00 3.62
654 672 2.597217 CAGCCGCCAAAGGAACCA 60.597 61.111 0.00 0.00 0.00 3.67
655 673 2.282462 AGCCGCCAAAGGAACCAG 60.282 61.111 0.00 0.00 0.00 4.00
658 676 2.676471 CGCCAAAGGAACCAGGGG 60.676 66.667 0.00 0.00 0.00 4.79
684 702 0.411848 AATCCCCAATTCCCCGTTGT 59.588 50.000 0.00 0.00 0.00 3.32
884 904 4.443621 GAACAGCACTAGGATTAAGGTCC 58.556 47.826 0.00 0.00 38.62 4.46
977 997 6.594159 TCTTCAGATTTCACCTTATTCGGTTC 59.406 38.462 0.00 0.00 34.29 3.62
1310 1336 0.546122 TTCGCCACTAGCCCATTCAT 59.454 50.000 0.00 0.00 38.78 2.57
1330 1356 3.458044 TGACAGGGAGAAGCTCTTAGA 57.542 47.619 0.00 0.00 0.00 2.10
1416 1563 5.203060 TGCACTGGTAATTTGGTTTAACC 57.797 39.130 7.27 7.27 39.22 2.85
1612 1764 1.136305 TGATGTGTAGGTTAGCCGAGC 59.864 52.381 0.00 0.00 40.50 5.03
1619 1771 1.110518 AGGTTAGCCGAGCTAGGAGC 61.111 60.000 18.16 5.59 42.34 4.70
1807 1959 9.460019 TGTGTAATTGGAATCTGATTCATAACA 57.540 29.630 26.60 19.49 41.03 2.41
2078 2289 4.290155 ACGTAAAAGCGAGTTTACTTCGA 58.710 39.130 15.27 0.00 40.37 3.71
2160 2371 1.730064 GTGACGTATGTTTGCCGATGT 59.270 47.619 0.00 0.00 0.00 3.06
2164 2375 3.852286 ACGTATGTTTGCCGATGTCTTA 58.148 40.909 0.00 0.00 0.00 2.10
2175 2386 8.395633 GTTTGCCGATGTCTTAAGTGTAATAAT 58.604 33.333 1.63 0.00 0.00 1.28
2176 2387 9.602568 TTTGCCGATGTCTTAAGTGTAATAATA 57.397 29.630 1.63 0.00 0.00 0.98
2203 2414 7.984422 ATTATGCATCTTTCCGTCATAATGA 57.016 32.000 0.19 0.00 38.30 2.57
2273 2484 8.382875 GTTGCTATTCAGGAAAAATAATTGTGC 58.617 33.333 0.00 0.00 33.47 4.57
2283 2494 4.775058 AAATAATTGTGCGTGGTTGCTA 57.225 36.364 0.00 0.00 35.36 3.49
2527 2753 5.864418 TCTGTCTATTTACTGGCCGTATT 57.136 39.130 0.00 0.00 0.00 1.89
2594 2820 7.556275 TCCAATTATTACCTTTGACAGATGACC 59.444 37.037 0.00 0.00 0.00 4.02
2702 2928 1.267121 CTACCCCACAGCTGTACAGT 58.733 55.000 21.20 18.13 0.00 3.55
2803 3427 1.471119 AAGGCAGGAGCATGTGAATG 58.529 50.000 0.00 0.00 44.61 2.67
2823 3447 8.807581 GTGAATGTTCTCAAGGTTTTGTAAAAG 58.192 33.333 0.00 0.00 35.73 2.27
2838 3462 9.788960 GTTTTGTAAAAGAAAAGATCTGTCTGT 57.211 29.630 9.40 2.40 38.79 3.41
2856 3487 7.013369 TCTGTCTGTTATACTGTAGCATACCAG 59.987 40.741 0.00 0.00 42.12 4.00
2863 3494 9.517609 GTTATACTGTAGCATACCAGCATATAC 57.482 37.037 0.00 0.00 42.12 1.47
3012 3645 6.518493 TGGAACCCAGTAGTATATTTTAGCG 58.482 40.000 0.00 0.00 0.00 4.26
3015 3648 6.170846 ACCCAGTAGTATATTTTAGCGCTT 57.829 37.500 18.68 0.00 0.00 4.68
3058 3691 3.117794 CAAACTGACAATTGTGCTGTGG 58.882 45.455 17.58 9.65 0.00 4.17
3322 3956 4.397420 TGCTTCATTTCTACTGGAAAGCA 58.603 39.130 2.99 2.99 45.61 3.91
3510 4144 1.524621 CGCTGCCGAAATCCTGGAT 60.525 57.895 2.57 2.57 36.29 3.41
3832 4469 1.004628 CTGGACCCCATGTGTCATTGA 59.995 52.381 12.92 0.00 34.36 2.57
3894 4531 4.910458 AACCTAACTAGCCACAAGTGAT 57.090 40.909 0.94 0.00 0.00 3.06
3981 4619 7.622713 TGATACTAAAAGGGACGGTTTTATCA 58.377 34.615 0.00 0.00 30.82 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.455647 TGAAGTGTGTGATGTTACTCCTAAG 58.544 40.000 0.00 0.00 0.00 2.18
1 2 6.413783 TGAAGTGTGTGATGTTACTCCTAA 57.586 37.500 0.00 0.00 0.00 2.69
2 3 6.413783 TTGAAGTGTGTGATGTTACTCCTA 57.586 37.500 0.00 0.00 0.00 2.94
3 4 4.955811 TGAAGTGTGTGATGTTACTCCT 57.044 40.909 0.00 0.00 0.00 3.69
4 5 6.649141 TGTATTGAAGTGTGTGATGTTACTCC 59.351 38.462 0.00 0.00 0.00 3.85
5 6 7.652300 TGTATTGAAGTGTGTGATGTTACTC 57.348 36.000 0.00 0.00 0.00 2.59
6 7 7.715249 AGTTGTATTGAAGTGTGTGATGTTACT 59.285 33.333 0.00 0.00 0.00 2.24
7 8 7.861630 AGTTGTATTGAAGTGTGTGATGTTAC 58.138 34.615 0.00 0.00 0.00 2.50
8 9 8.445275 AAGTTGTATTGAAGTGTGTGATGTTA 57.555 30.769 0.00 0.00 0.00 2.41
9 10 6.942532 AGTTGTATTGAAGTGTGTGATGTT 57.057 33.333 0.00 0.00 0.00 2.71
10 11 6.942532 AAGTTGTATTGAAGTGTGTGATGT 57.057 33.333 0.00 0.00 0.00 3.06
11 12 6.142798 GCAAAGTTGTATTGAAGTGTGTGATG 59.857 38.462 0.00 0.00 0.00 3.07
12 13 6.039717 AGCAAAGTTGTATTGAAGTGTGTGAT 59.960 34.615 0.00 0.00 0.00 3.06
13 14 5.356751 AGCAAAGTTGTATTGAAGTGTGTGA 59.643 36.000 0.00 0.00 0.00 3.58
14 15 5.581605 AGCAAAGTTGTATTGAAGTGTGTG 58.418 37.500 0.00 0.00 0.00 3.82
15 16 5.835113 AGCAAAGTTGTATTGAAGTGTGT 57.165 34.783 0.00 0.00 0.00 3.72
16 17 7.862372 ACATAAGCAAAGTTGTATTGAAGTGTG 59.138 33.333 0.00 0.00 0.00 3.82
17 18 7.862372 CACATAAGCAAAGTTGTATTGAAGTGT 59.138 33.333 0.00 0.00 0.00 3.55
18 19 8.075574 TCACATAAGCAAAGTTGTATTGAAGTG 58.924 33.333 0.00 0.00 0.00 3.16
19 20 8.076178 GTCACATAAGCAAAGTTGTATTGAAGT 58.924 33.333 0.00 0.00 0.00 3.01
20 21 8.075574 TGTCACATAAGCAAAGTTGTATTGAAG 58.924 33.333 0.00 0.00 0.00 3.02
21 22 7.860373 GTGTCACATAAGCAAAGTTGTATTGAA 59.140 33.333 0.00 0.00 0.00 2.69
22 23 7.012799 TGTGTCACATAAGCAAAGTTGTATTGA 59.987 33.333 0.18 0.00 0.00 2.57
23 24 7.138081 TGTGTCACATAAGCAAAGTTGTATTG 58.862 34.615 0.18 0.00 0.00 1.90
24 25 7.270757 TGTGTCACATAAGCAAAGTTGTATT 57.729 32.000 0.18 0.00 0.00 1.89
25 26 6.875948 TGTGTCACATAAGCAAAGTTGTAT 57.124 33.333 0.18 0.00 0.00 2.29
26 27 6.875948 ATGTGTCACATAAGCAAAGTTGTA 57.124 33.333 16.99 0.00 36.99 2.41
27 28 5.772825 ATGTGTCACATAAGCAAAGTTGT 57.227 34.783 16.99 0.00 36.99 3.32
28 29 8.746922 AAATATGTGTCACATAAGCAAAGTTG 57.253 30.769 25.55 0.00 43.50 3.16
40 41 9.591792 CTCTCTCTTCATTAAATATGTGTCACA 57.408 33.333 8.40 8.40 0.00 3.58
41 42 9.039870 CCTCTCTCTTCATTAAATATGTGTCAC 57.960 37.037 0.00 0.00 0.00 3.67
42 43 8.762645 ACCTCTCTCTTCATTAAATATGTGTCA 58.237 33.333 0.00 0.00 0.00 3.58
43 44 9.039870 CACCTCTCTCTTCATTAAATATGTGTC 57.960 37.037 0.00 0.00 0.00 3.67
44 45 7.497249 GCACCTCTCTCTTCATTAAATATGTGT 59.503 37.037 0.00 0.00 0.00 3.72
45 46 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
46 47 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
47 48 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
48 49 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
49 50 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
50 51 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
51 52 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
52 53 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
53 54 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
54 55 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
55 56 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
56 57 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
57 58 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
58 59 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
59 60 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
60 61 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
61 62 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
62 63 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
63 64 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
64 65 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
65 66 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
66 67 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
67 68 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
68 69 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
77 78 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
79 80 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
80 81 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
81 82 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
82 83 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
83 84 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
84 85 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
85 86 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
86 87 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
87 88 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
88 89 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
89 90 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
90 91 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
91 92 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
92 93 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
93 94 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
94 95 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
95 96 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
96 97 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
97 98 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
98 99 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
99 100 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
100 101 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
101 102 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
102 103 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
103 104 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
104 105 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
105 106 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
106 107 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
107 108 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
108 109 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
109 110 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
128 129 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
129 130 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
130 131 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
131 132 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
132 133 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
133 134 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
134 135 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
135 136 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
136 137 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
137 138 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
138 139 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
139 140 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
140 141 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
141 142 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
142 143 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
143 144 5.262588 TCTATGTAGTGTCATGCAACGAT 57.737 39.130 0.00 0.00 0.00 3.73
144 145 4.712122 TCTATGTAGTGTCATGCAACGA 57.288 40.909 0.00 0.00 0.00 3.85
145 146 4.805719 ACATCTATGTAGTGTCATGCAACG 59.194 41.667 0.00 0.00 39.68 4.10
146 147 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
147 148 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
148 149 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
149 150 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
150 151 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
151 152 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
152 153 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
153 154 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
154 155 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
155 156 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
156 157 5.778542 AGTGGGTAGGAACATCTATGTAGT 58.221 41.667 0.00 0.00 40.80 2.73
157 158 7.093727 CCATAGTGGGTAGGAACATCTATGTAG 60.094 44.444 0.00 0.00 35.14 2.74
158 159 6.724441 CCATAGTGGGTAGGAACATCTATGTA 59.276 42.308 0.00 0.00 35.14 2.29
159 160 5.544176 CCATAGTGGGTAGGAACATCTATGT 59.456 44.000 0.00 0.00 36.83 2.29
160 161 5.780282 TCCATAGTGGGTAGGAACATCTATG 59.220 44.000 0.00 0.00 38.32 2.23
161 162 5.977533 TCCATAGTGGGTAGGAACATCTAT 58.022 41.667 0.00 0.00 38.32 1.98
162 163 5.394738 CTCCATAGTGGGTAGGAACATCTA 58.605 45.833 0.00 0.00 38.32 1.98
163 164 4.227197 CTCCATAGTGGGTAGGAACATCT 58.773 47.826 0.00 0.00 38.32 2.90
164 165 3.325135 CCTCCATAGTGGGTAGGAACATC 59.675 52.174 0.00 0.00 38.32 3.06
165 166 3.311402 ACCTCCATAGTGGGTAGGAACAT 60.311 47.826 9.90 0.00 38.32 2.71
166 167 2.045326 ACCTCCATAGTGGGTAGGAACA 59.955 50.000 9.90 0.00 38.32 3.18
167 168 2.760581 ACCTCCATAGTGGGTAGGAAC 58.239 52.381 9.90 0.00 38.32 3.62
168 169 4.194678 CTACCTCCATAGTGGGTAGGAA 57.805 50.000 9.90 0.00 45.09 3.36
169 170 3.897657 CTACCTCCATAGTGGGTAGGA 57.102 52.381 9.90 0.00 45.09 2.94
172 173 9.132185 ACTATATTACTACCTCCATAGTGGGTA 57.868 37.037 0.00 0.00 38.32 3.69
173 174 8.009242 ACTATATTACTACCTCCATAGTGGGT 57.991 38.462 0.00 0.00 38.32 4.51
174 175 8.337739 AGACTATATTACTACCTCCATAGTGGG 58.662 40.741 0.00 0.00 38.32 4.61
179 180 9.809705 TCCCTAGACTATATTACTACCTCCATA 57.190 37.037 0.00 0.00 0.00 2.74
180 181 8.712168 TCCCTAGACTATATTACTACCTCCAT 57.288 38.462 0.00 0.00 0.00 3.41
181 182 8.529952 TTCCCTAGACTATATTACTACCTCCA 57.470 38.462 0.00 0.00 0.00 3.86
182 183 8.613923 ACTTCCCTAGACTATATTACTACCTCC 58.386 40.741 0.00 0.00 0.00 4.30
183 184 9.452287 CACTTCCCTAGACTATATTACTACCTC 57.548 40.741 0.00 0.00 0.00 3.85
184 185 8.957926 ACACTTCCCTAGACTATATTACTACCT 58.042 37.037 0.00 0.00 0.00 3.08
185 186 9.012161 CACACTTCCCTAGACTATATTACTACC 57.988 40.741 0.00 0.00 0.00 3.18
186 187 9.571816 ACACACTTCCCTAGACTATATTACTAC 57.428 37.037 0.00 0.00 0.00 2.73
191 192 9.490083 AACTTACACACTTCCCTAGACTATATT 57.510 33.333 0.00 0.00 0.00 1.28
193 194 9.401058 GTAACTTACACACTTCCCTAGACTATA 57.599 37.037 0.00 0.00 0.00 1.31
194 195 8.114743 AGTAACTTACACACTTCCCTAGACTAT 58.885 37.037 1.79 0.00 0.00 2.12
195 196 7.465116 AGTAACTTACACACTTCCCTAGACTA 58.535 38.462 1.79 0.00 0.00 2.59
196 197 6.313324 AGTAACTTACACACTTCCCTAGACT 58.687 40.000 1.79 0.00 0.00 3.24
197 198 6.587206 AGTAACTTACACACTTCCCTAGAC 57.413 41.667 1.79 0.00 0.00 2.59
198 199 7.693132 TCTAGTAACTTACACACTTCCCTAGA 58.307 38.462 1.79 0.00 0.00 2.43
199 200 7.934855 TCTAGTAACTTACACACTTCCCTAG 57.065 40.000 1.79 0.00 0.00 3.02
200 201 8.890410 AATCTAGTAACTTACACACTTCCCTA 57.110 34.615 1.79 0.00 0.00 3.53
201 202 7.793948 AATCTAGTAACTTACACACTTCCCT 57.206 36.000 1.79 0.00 0.00 4.20
202 203 9.530633 CATAATCTAGTAACTTACACACTTCCC 57.469 37.037 1.79 0.00 0.00 3.97
210 211 9.595823 GGCAAGAACATAATCTAGTAACTTACA 57.404 33.333 1.79 0.00 0.00 2.41
211 212 9.043079 GGGCAAGAACATAATCTAGTAACTTAC 57.957 37.037 0.00 0.00 0.00 2.34
212 213 8.764558 TGGGCAAGAACATAATCTAGTAACTTA 58.235 33.333 0.00 0.00 0.00 2.24
213 214 7.630082 TGGGCAAGAACATAATCTAGTAACTT 58.370 34.615 0.00 0.00 0.00 2.66
214 215 7.195374 TGGGCAAGAACATAATCTAGTAACT 57.805 36.000 0.00 0.00 0.00 2.24
215 216 8.345565 CAATGGGCAAGAACATAATCTAGTAAC 58.654 37.037 0.00 0.00 0.00 2.50
216 217 7.013274 GCAATGGGCAAGAACATAATCTAGTAA 59.987 37.037 0.00 0.00 43.97 2.24
217 218 6.486657 GCAATGGGCAAGAACATAATCTAGTA 59.513 38.462 0.00 0.00 43.97 1.82
218 219 5.300286 GCAATGGGCAAGAACATAATCTAGT 59.700 40.000 0.00 0.00 43.97 2.57
219 220 5.561532 CGCAATGGGCAAGAACATAATCTAG 60.562 44.000 0.00 0.00 45.17 2.43
220 221 4.275689 CGCAATGGGCAAGAACATAATCTA 59.724 41.667 0.00 0.00 45.17 1.98
221 222 3.067180 CGCAATGGGCAAGAACATAATCT 59.933 43.478 0.00 0.00 45.17 2.40
222 223 3.066621 TCGCAATGGGCAAGAACATAATC 59.933 43.478 0.00 0.00 45.17 1.75
223 224 3.023119 TCGCAATGGGCAAGAACATAAT 58.977 40.909 0.00 0.00 45.17 1.28
224 225 2.163412 GTCGCAATGGGCAAGAACATAA 59.837 45.455 0.00 0.00 45.17 1.90
225 226 1.742831 GTCGCAATGGGCAAGAACATA 59.257 47.619 0.00 0.00 45.17 2.29
226 227 0.527565 GTCGCAATGGGCAAGAACAT 59.472 50.000 0.00 0.00 45.17 2.71
227 228 1.523154 GGTCGCAATGGGCAAGAACA 61.523 55.000 0.00 0.00 45.17 3.18
228 229 1.212751 GGTCGCAATGGGCAAGAAC 59.787 57.895 0.00 0.00 45.17 3.01
229 230 1.228398 TGGTCGCAATGGGCAAGAA 60.228 52.632 0.00 0.00 45.17 2.52
230 231 1.675310 CTGGTCGCAATGGGCAAGA 60.675 57.895 0.00 0.00 45.17 3.02
231 232 1.926511 GACTGGTCGCAATGGGCAAG 61.927 60.000 0.00 0.00 45.17 4.01
232 233 1.971167 GACTGGTCGCAATGGGCAA 60.971 57.895 0.00 0.00 45.17 4.52
233 234 2.359850 GACTGGTCGCAATGGGCA 60.360 61.111 0.00 0.00 45.17 5.36
234 235 2.045926 AGACTGGTCGCAATGGGC 60.046 61.111 0.00 0.00 39.90 5.36
235 236 0.107508 ATGAGACTGGTCGCAATGGG 60.108 55.000 10.77 0.00 42.37 4.00
236 237 2.159043 AGTATGAGACTGGTCGCAATGG 60.159 50.000 10.77 0.00 42.37 3.16
237 238 3.170791 AGTATGAGACTGGTCGCAATG 57.829 47.619 10.77 0.00 42.37 2.82
238 239 3.954904 AGTAGTATGAGACTGGTCGCAAT 59.045 43.478 10.77 4.06 42.37 3.56
239 240 3.353557 AGTAGTATGAGACTGGTCGCAA 58.646 45.455 10.77 0.00 42.37 4.85
240 241 3.000684 AGTAGTATGAGACTGGTCGCA 57.999 47.619 9.33 9.33 43.19 5.10
241 242 4.128643 ACTAGTAGTATGAGACTGGTCGC 58.871 47.826 0.00 0.00 39.39 5.19
242 243 6.985645 AGTTACTAGTAGTATGAGACTGGTCG 59.014 42.308 10.82 0.00 39.39 4.79
243 244 9.480053 CTAGTTACTAGTAGTATGAGACTGGTC 57.520 40.741 17.24 0.00 39.39 4.02
244 245 7.933033 GCTAGTTACTAGTAGTATGAGACTGGT 59.067 40.741 19.12 0.00 40.16 4.00
245 246 8.152246 AGCTAGTTACTAGTAGTATGAGACTGG 58.848 40.741 19.12 15.80 35.28 4.00
292 293 6.709397 TGATGTGGCAAGCAATAAATGAAAAA 59.291 30.769 0.00 0.00 0.00 1.94
293 294 6.228995 TGATGTGGCAAGCAATAAATGAAAA 58.771 32.000 0.00 0.00 0.00 2.29
294 295 5.791666 TGATGTGGCAAGCAATAAATGAAA 58.208 33.333 0.00 0.00 0.00 2.69
295 296 5.402997 TGATGTGGCAAGCAATAAATGAA 57.597 34.783 0.00 0.00 0.00 2.57
296 297 5.601583 ATGATGTGGCAAGCAATAAATGA 57.398 34.783 0.00 0.00 0.00 2.57
297 298 9.647797 AATATATGATGTGGCAAGCAATAAATG 57.352 29.630 0.00 0.00 0.00 2.32
298 299 9.865321 GAATATATGATGTGGCAAGCAATAAAT 57.135 29.630 0.00 0.00 0.00 1.40
299 300 9.081204 AGAATATATGATGTGGCAAGCAATAAA 57.919 29.630 0.00 0.00 0.00 1.40
300 301 8.640063 AGAATATATGATGTGGCAAGCAATAA 57.360 30.769 0.00 0.00 0.00 1.40
301 302 9.910267 ATAGAATATATGATGTGGCAAGCAATA 57.090 29.630 0.00 0.00 0.00 1.90
302 303 8.683615 CATAGAATATATGATGTGGCAAGCAAT 58.316 33.333 0.00 0.00 0.00 3.56
303 304 7.666804 ACATAGAATATATGATGTGGCAAGCAA 59.333 33.333 1.51 0.00 31.41 3.91
304 305 7.170277 ACATAGAATATATGATGTGGCAAGCA 58.830 34.615 1.51 0.00 31.41 3.91
305 306 7.621428 ACATAGAATATATGATGTGGCAAGC 57.379 36.000 1.51 0.00 31.41 4.01
308 309 9.875691 GAGTAACATAGAATATATGATGTGGCA 57.124 33.333 1.51 0.00 32.92 4.92
309 310 9.319143 GGAGTAACATAGAATATATGATGTGGC 57.681 37.037 1.51 5.77 32.92 5.01
310 311 9.823647 GGGAGTAACATAGAATATATGATGTGG 57.176 37.037 1.51 0.00 32.92 4.17
311 312 9.823647 GGGGAGTAACATAGAATATATGATGTG 57.176 37.037 1.51 2.24 32.92 3.21
312 313 9.560860 TGGGGAGTAACATAGAATATATGATGT 57.439 33.333 1.51 3.46 34.00 3.06
313 314 9.823647 GTGGGGAGTAACATAGAATATATGATG 57.176 37.037 1.51 0.00 0.00 3.07
314 315 9.790297 AGTGGGGAGTAACATAGAATATATGAT 57.210 33.333 1.51 0.00 0.00 2.45
315 316 9.615660 AAGTGGGGAGTAACATAGAATATATGA 57.384 33.333 1.51 0.00 0.00 2.15
326 327 9.408648 CTTCATTTATTAAGTGGGGAGTAACAT 57.591 33.333 0.00 0.00 0.00 2.71
327 328 8.387813 ACTTCATTTATTAAGTGGGGAGTAACA 58.612 33.333 0.00 0.00 34.70 2.41
328 329 8.674607 CACTTCATTTATTAAGTGGGGAGTAAC 58.325 37.037 8.31 0.00 45.68 2.50
329 330 8.801882 CACTTCATTTATTAAGTGGGGAGTAA 57.198 34.615 8.31 0.00 45.68 2.24
342 343 9.801873 GTGGTAATATGCAACACTTCATTTATT 57.198 29.630 0.00 0.00 0.00 1.40
343 344 8.965819 TGTGGTAATATGCAACACTTCATTTAT 58.034 29.630 0.00 0.00 33.44 1.40
344 345 8.341892 TGTGGTAATATGCAACACTTCATTTA 57.658 30.769 0.00 0.00 33.44 1.40
345 346 7.225784 TGTGGTAATATGCAACACTTCATTT 57.774 32.000 0.00 0.00 33.44 2.32
346 347 6.832520 TGTGGTAATATGCAACACTTCATT 57.167 33.333 0.00 0.00 33.44 2.57
347 348 8.570488 CATATGTGGTAATATGCAACACTTCAT 58.430 33.333 0.00 0.00 34.61 2.57
348 349 7.555914 ACATATGTGGTAATATGCAACACTTCA 59.444 33.333 7.78 0.00 42.07 3.02
349 350 7.930217 ACATATGTGGTAATATGCAACACTTC 58.070 34.615 7.78 0.00 42.07 3.01
350 351 7.880160 ACATATGTGGTAATATGCAACACTT 57.120 32.000 7.78 4.16 42.07 3.16
351 352 7.880160 AACATATGTGGTAATATGCAACACT 57.120 32.000 9.63 0.00 42.07 3.55
352 353 8.836413 AGTAACATATGTGGTAATATGCAACAC 58.164 33.333 9.63 0.00 42.07 3.32
353 354 8.972458 AGTAACATATGTGGTAATATGCAACA 57.028 30.769 9.63 0.00 42.07 3.33
354 355 8.504005 GGAGTAACATATGTGGTAATATGCAAC 58.496 37.037 9.63 3.78 42.07 4.17
355 356 7.663905 GGGAGTAACATATGTGGTAATATGCAA 59.336 37.037 9.63 0.00 42.07 4.08
356 357 7.165485 GGGAGTAACATATGTGGTAATATGCA 58.835 38.462 9.63 0.00 42.07 3.96
357 358 6.598064 GGGGAGTAACATATGTGGTAATATGC 59.402 42.308 9.63 0.00 42.07 3.14
358 359 7.606456 GTGGGGAGTAACATATGTGGTAATATG 59.394 40.741 9.63 3.27 43.36 1.78
359 360 7.516209 AGTGGGGAGTAACATATGTGGTAATAT 59.484 37.037 9.63 0.00 0.00 1.28
360 361 6.847567 AGTGGGGAGTAACATATGTGGTAATA 59.152 38.462 9.63 0.00 0.00 0.98
361 362 5.670361 AGTGGGGAGTAACATATGTGGTAAT 59.330 40.000 9.63 0.00 0.00 1.89
362 363 5.034200 AGTGGGGAGTAACATATGTGGTAA 58.966 41.667 9.63 0.00 0.00 2.85
363 364 4.627015 AGTGGGGAGTAACATATGTGGTA 58.373 43.478 9.63 0.00 0.00 3.25
364 365 3.460825 AGTGGGGAGTAACATATGTGGT 58.539 45.455 9.63 0.00 0.00 4.16
365 366 5.825593 ATAGTGGGGAGTAACATATGTGG 57.174 43.478 9.63 0.00 0.00 4.17
366 367 7.670140 TCTCTATAGTGGGGAGTAACATATGTG 59.330 40.741 9.63 0.00 0.00 3.21
367 368 7.766628 TCTCTATAGTGGGGAGTAACATATGT 58.233 38.462 1.41 1.41 0.00 2.29
368 369 8.830915 ATCTCTATAGTGGGGAGTAACATATG 57.169 38.462 0.00 0.00 0.00 1.78
370 371 9.125255 ACTATCTCTATAGTGGGGAGTAACATA 57.875 37.037 0.00 0.00 45.34 2.29
371 372 8.002431 ACTATCTCTATAGTGGGGAGTAACAT 57.998 38.462 0.00 0.00 45.34 2.71
372 373 7.403837 ACTATCTCTATAGTGGGGAGTAACA 57.596 40.000 0.00 0.00 45.34 2.41
373 374 9.978336 ATTACTATCTCTATAGTGGGGAGTAAC 57.022 37.037 17.08 0.00 46.28 2.50
409 410 9.742144 ACAATGGGTAGTAACATAAACATGTTA 57.258 29.630 12.39 6.20 43.69 2.41
410 411 8.519526 CACAATGGGTAGTAACATAAACATGTT 58.480 33.333 4.92 4.92 45.64 2.71
411 412 7.122055 CCACAATGGGTAGTAACATAAACATGT 59.878 37.037 0.00 0.00 32.67 3.21
412 413 7.479980 CCACAATGGGTAGTAACATAAACATG 58.520 38.462 0.00 0.00 32.67 3.21
413 414 6.096282 GCCACAATGGGTAGTAACATAAACAT 59.904 38.462 0.00 0.00 38.19 2.71
414 415 5.416326 GCCACAATGGGTAGTAACATAAACA 59.584 40.000 0.00 0.00 38.19 2.83
415 416 5.886992 GCCACAATGGGTAGTAACATAAAC 58.113 41.667 0.00 0.00 38.19 2.01
428 429 4.080863 AGAGTTTAGACTAGCCACAATGGG 60.081 45.833 0.00 0.00 35.38 4.00
429 430 5.091261 AGAGTTTAGACTAGCCACAATGG 57.909 43.478 0.00 0.00 37.05 3.16
430 431 5.724328 TGAGAGTTTAGACTAGCCACAATG 58.276 41.667 0.00 0.00 35.88 2.82
431 432 5.625656 GCTGAGAGTTTAGACTAGCCACAAT 60.626 44.000 0.00 0.00 35.88 2.71
432 433 4.322049 GCTGAGAGTTTAGACTAGCCACAA 60.322 45.833 0.00 0.00 35.88 3.33
433 434 3.193691 GCTGAGAGTTTAGACTAGCCACA 59.806 47.826 0.00 0.00 35.88 4.17
434 435 3.776340 GCTGAGAGTTTAGACTAGCCAC 58.224 50.000 0.00 0.00 35.88 5.01
436 437 3.446310 GGCTGAGAGTTTAGACTAGCC 57.554 52.381 9.31 9.31 43.95 3.93
437 438 2.761208 TGGGCTGAGAGTTTAGACTAGC 59.239 50.000 0.00 0.00 35.88 3.42
438 439 3.181480 GCTGGGCTGAGAGTTTAGACTAG 60.181 52.174 0.00 0.00 35.88 2.57
439 440 2.761208 GCTGGGCTGAGAGTTTAGACTA 59.239 50.000 0.00 0.00 35.88 2.59
440 441 1.552792 GCTGGGCTGAGAGTTTAGACT 59.447 52.381 0.00 0.00 39.32 3.24
441 442 1.552792 AGCTGGGCTGAGAGTTTAGAC 59.447 52.381 0.00 0.00 37.57 2.59
442 443 1.944177 AGCTGGGCTGAGAGTTTAGA 58.056 50.000 0.00 0.00 37.57 2.10
443 444 2.354259 CAAGCTGGGCTGAGAGTTTAG 58.646 52.381 0.00 0.00 39.62 1.85
444 445 1.611673 GCAAGCTGGGCTGAGAGTTTA 60.612 52.381 3.50 0.00 39.62 2.01
445 446 0.892814 GCAAGCTGGGCTGAGAGTTT 60.893 55.000 3.50 0.00 39.62 2.66
446 447 1.303155 GCAAGCTGGGCTGAGAGTT 60.303 57.895 3.50 0.00 39.62 3.01
447 448 2.350514 GCAAGCTGGGCTGAGAGT 59.649 61.111 3.50 0.00 39.62 3.24
448 449 2.438075 GGCAAGCTGGGCTGAGAG 60.438 66.667 7.57 0.00 39.62 3.20
449 450 2.932194 AGGCAAGCTGGGCTGAGA 60.932 61.111 17.99 0.00 42.76 3.27
453 454 3.564345 CTGTCAGGCAAGCTGGGCT 62.564 63.158 12.34 12.34 45.66 5.19
454 455 3.060615 CTGTCAGGCAAGCTGGGC 61.061 66.667 6.54 6.54 0.00 5.36
455 456 0.538057 TTTCTGTCAGGCAAGCTGGG 60.538 55.000 0.00 0.00 0.00 4.45
456 457 0.879765 CTTTCTGTCAGGCAAGCTGG 59.120 55.000 0.00 0.00 0.00 4.85
457 458 0.240411 GCTTTCTGTCAGGCAAGCTG 59.760 55.000 21.54 0.00 38.89 4.24
458 459 0.892814 GGCTTTCTGTCAGGCAAGCT 60.893 55.000 24.99 0.00 41.25 3.74
459 460 1.583477 GGCTTTCTGTCAGGCAAGC 59.417 57.895 21.04 21.04 40.85 4.01
460 461 1.580845 CCGGCTTTCTGTCAGGCAAG 61.581 60.000 0.00 4.39 36.62 4.01
552 554 4.260170 AGAATCTTTTGTGGCTCAGCTAG 58.740 43.478 0.00 0.00 0.00 3.42
553 555 4.256920 GAGAATCTTTTGTGGCTCAGCTA 58.743 43.478 0.00 0.00 0.00 3.32
554 556 3.080319 GAGAATCTTTTGTGGCTCAGCT 58.920 45.455 0.00 0.00 0.00 4.24
555 557 2.816087 TGAGAATCTTTTGTGGCTCAGC 59.184 45.455 0.00 0.00 34.92 4.26
556 558 5.443185 TTTGAGAATCTTTTGTGGCTCAG 57.557 39.130 0.00 0.00 34.33 3.35
557 559 5.850557 TTTTGAGAATCTTTTGTGGCTCA 57.149 34.783 0.00 0.00 34.92 4.26
584 586 5.009510 GGCTCAGCTTCTTCTTCTTCTTTTT 59.990 40.000 0.00 0.00 0.00 1.94
585 587 4.518590 GGCTCAGCTTCTTCTTCTTCTTTT 59.481 41.667 0.00 0.00 0.00 2.27
586 588 4.071423 GGCTCAGCTTCTTCTTCTTCTTT 58.929 43.478 0.00 0.00 0.00 2.52
587 589 3.072184 TGGCTCAGCTTCTTCTTCTTCTT 59.928 43.478 0.00 0.00 0.00 2.52
588 590 2.636893 TGGCTCAGCTTCTTCTTCTTCT 59.363 45.455 0.00 0.00 0.00 2.85
589 591 2.741517 GTGGCTCAGCTTCTTCTTCTTC 59.258 50.000 0.00 0.00 0.00 2.87
590 592 2.105477 TGTGGCTCAGCTTCTTCTTCTT 59.895 45.455 0.00 0.00 0.00 2.52
591 593 1.696336 TGTGGCTCAGCTTCTTCTTCT 59.304 47.619 0.00 0.00 0.00 2.85
592 594 2.175878 TGTGGCTCAGCTTCTTCTTC 57.824 50.000 0.00 0.00 0.00 2.87
593 595 2.645838 TTGTGGCTCAGCTTCTTCTT 57.354 45.000 0.00 0.00 0.00 2.52
594 596 2.105477 TCTTTGTGGCTCAGCTTCTTCT 59.895 45.455 0.00 0.00 0.00 2.85
595 597 2.498167 TCTTTGTGGCTCAGCTTCTTC 58.502 47.619 0.00 0.00 0.00 2.87
596 598 2.645838 TCTTTGTGGCTCAGCTTCTT 57.354 45.000 0.00 0.00 0.00 2.52
597 599 2.645838 TTCTTTGTGGCTCAGCTTCT 57.354 45.000 0.00 0.00 0.00 2.85
598 600 2.606551 GCTTTCTTTGTGGCTCAGCTTC 60.607 50.000 0.00 0.00 0.00 3.86
599 601 1.339291 GCTTTCTTTGTGGCTCAGCTT 59.661 47.619 0.00 0.00 0.00 3.74
600 602 0.957362 GCTTTCTTTGTGGCTCAGCT 59.043 50.000 0.00 0.00 0.00 4.24
601 603 0.670162 TGCTTTCTTTGTGGCTCAGC 59.330 50.000 0.00 0.00 0.00 4.26
602 604 3.005050 TCAATGCTTTCTTTGTGGCTCAG 59.995 43.478 0.00 0.00 0.00 3.35
603 605 2.957680 TCAATGCTTTCTTTGTGGCTCA 59.042 40.909 0.00 0.00 0.00 4.26
604 606 3.648339 TCAATGCTTTCTTTGTGGCTC 57.352 42.857 0.00 0.00 0.00 4.70
605 607 3.801293 GCTTCAATGCTTTCTTTGTGGCT 60.801 43.478 0.00 0.00 0.00 4.75
606 608 2.477754 GCTTCAATGCTTTCTTTGTGGC 59.522 45.455 0.00 0.00 0.00 5.01
607 609 3.062042 GGCTTCAATGCTTTCTTTGTGG 58.938 45.455 0.00 0.00 0.00 4.17
608 610 3.062042 GGGCTTCAATGCTTTCTTTGTG 58.938 45.455 0.00 0.00 0.00 3.33
609 611 2.699846 TGGGCTTCAATGCTTTCTTTGT 59.300 40.909 0.00 0.00 0.00 2.83
610 612 3.062042 GTGGGCTTCAATGCTTTCTTTG 58.938 45.455 0.00 0.00 0.00 2.77
611 613 2.967887 AGTGGGCTTCAATGCTTTCTTT 59.032 40.909 0.00 0.00 0.00 2.52
662 680 2.304470 CAACGGGGAATTGGGGATTTTT 59.696 45.455 0.00 0.00 0.00 1.94
684 702 2.235028 TTGCCGGGGAAGAATGGGA 61.235 57.895 2.18 0.00 0.00 4.37
745 764 3.675353 GAACTTAACGCCGCGACGC 62.675 63.158 21.79 10.49 36.19 5.19
751 770 0.093026 CTCGCTTGAACTTAACGCCG 59.907 55.000 0.00 0.00 0.00 6.46
1119 1145 4.176851 GACGTCCCTCCGCTCGAC 62.177 72.222 3.51 0.00 0.00 4.20
1310 1336 3.458044 TCTAAGAGCTTCTCCCTGTCA 57.542 47.619 0.00 0.00 0.00 3.58
1362 1391 4.738381 TTTATATCCCATGGATGGCACA 57.262 40.909 15.22 0.00 46.70 4.57
1416 1563 4.817517 ACGGGTGCCTTTCGATATATTAG 58.182 43.478 0.00 0.00 0.00 1.73
1612 1764 0.601311 GGGTATTGCTGCGCTCCTAG 60.601 60.000 9.73 0.00 0.00 3.02
1658 1810 4.213270 CAGAAGTTCGGTTTGCAACATCTA 59.787 41.667 0.00 0.00 30.68 1.98
1830 2001 8.893563 TTAAATTTCATCCCTTTGGTCATACT 57.106 30.769 0.00 0.00 0.00 2.12
2175 2386 8.669946 TTATGACGGAAAGATGCATAATGTTA 57.330 30.769 0.00 0.00 0.00 2.41
2176 2387 7.566760 TTATGACGGAAAGATGCATAATGTT 57.433 32.000 0.00 0.00 0.00 2.71
2233 2444 9.573133 CCTGAATAGCAACTGTAAAATAAAAGG 57.427 33.333 0.00 0.00 0.00 3.11
2273 2484 3.896648 AACAACATCTTAGCAACCACG 57.103 42.857 0.00 0.00 0.00 4.94
2283 2494 6.365520 AGGACACCTAAGAAAACAACATCTT 58.634 36.000 0.00 0.00 39.19 2.40
2348 2559 5.830991 TCCTTTTCCCGAAAATCTTTTCTCA 59.169 36.000 12.23 0.00 43.27 3.27
2463 2674 9.979578 AATTTACAAAATTATCAGACTTGTGCA 57.020 25.926 0.73 0.00 32.69 4.57
2527 2753 5.482006 CAGCGGATGGATACTGATAAATCA 58.518 41.667 0.00 0.00 35.16 2.57
2594 2820 1.210478 CCCATCTCAACCTACCACCAG 59.790 57.143 0.00 0.00 0.00 4.00
2611 2837 1.779061 GCTGTTTCTGACCCCTCCCA 61.779 60.000 0.00 0.00 0.00 4.37
2702 2928 4.155826 GCTTGTCATGGTAAATGTAGCACA 59.844 41.667 0.00 0.00 40.40 4.57
2746 3370 8.871629 ATAATTGTTGTGGTGACCTACATTTA 57.128 30.769 2.11 11.19 0.00 1.40
2803 3427 9.634163 TCTTTTCTTTTACAAAACCTTGAGAAC 57.366 29.630 0.00 0.00 36.33 3.01
2823 3447 9.026074 GCTACAGTATAACAGACAGATCTTTTC 57.974 37.037 0.00 0.00 30.42 2.29
2838 3462 8.403236 CGTATATGCTGGTATGCTACAGTATAA 58.597 37.037 6.57 0.00 42.63 0.98
2856 3487 3.552699 TCAAAACCGTACAGCGTATATGC 59.447 43.478 9.00 9.00 39.32 3.14
2863 3494 2.032377 ACAACATCAAAACCGTACAGCG 60.032 45.455 0.00 0.00 40.95 5.18
2966 3599 6.209192 TCCAGCAATGAAATCTAACACATTGT 59.791 34.615 16.26 0.00 46.09 2.71
2967 3600 6.623486 TCCAGCAATGAAATCTAACACATTG 58.377 36.000 0.00 0.00 46.68 2.82
3005 3638 0.111639 AAGGTCCCCAAGCGCTAAAA 59.888 50.000 12.05 0.00 0.00 1.52
3012 3645 2.299013 CCAAAAGTTAAGGTCCCCAAGC 59.701 50.000 0.00 0.00 0.00 4.01
3015 3648 2.514582 TCACCAAAAGTTAAGGTCCCCA 59.485 45.455 0.00 0.00 32.15 4.96
3030 3663 4.742417 CACAATTGTCAGTTTGTCACCAA 58.258 39.130 8.48 0.00 33.93 3.67
3031 3664 3.428725 GCACAATTGTCAGTTTGTCACCA 60.429 43.478 8.48 0.00 33.93 4.17
3047 3680 0.035317 TCGAAGAGCCACAGCACAAT 59.965 50.000 0.00 0.00 43.56 2.71
3295 3929 6.707440 TTCCAGTAGAAATGAAGCAACAAA 57.293 33.333 0.00 0.00 0.00 2.83
3510 4144 1.810853 CATGATGCGCAGACGGACA 60.811 57.895 18.32 9.25 44.64 4.02
3548 4184 0.111045 CGTGTCGCGTATTGCAAACA 60.111 50.000 5.77 0.00 46.97 2.83
3894 4531 2.766828 CCCAGGGTTTTACCACAAAACA 59.233 45.455 12.99 0.00 41.02 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.