Multiple sequence alignment - TraesCS2D01G199500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G199500 chr2D 100.000 5492 0 0 1 5492 150395744 150390253 0.000000e+00 10142.0
1 TraesCS2D01G199500 chr2D 98.020 101 1 1 2674 2773 150392973 150392873 2.030000e-39 174.0
2 TraesCS2D01G199500 chr2D 98.020 101 1 1 2772 2872 150393071 150392972 2.030000e-39 174.0
3 TraesCS2D01G199500 chr2A 95.678 2036 58 9 743 2773 151251309 151253319 0.000000e+00 3245.0
4 TraesCS2D01G199500 chr2A 96.105 1181 41 3 3480 4655 151254205 151255385 0.000000e+00 1921.0
5 TraesCS2D01G199500 chr2A 91.766 668 24 5 4844 5492 151255936 151256591 0.000000e+00 900.0
6 TraesCS2D01G199500 chr2A 96.644 447 13 1 3010 3454 151253494 151253940 0.000000e+00 741.0
7 TraesCS2D01G199500 chr2A 97.156 211 6 0 2772 2982 151253219 151253429 1.880000e-94 357.0
8 TraesCS2D01G199500 chr2A 91.600 250 17 4 131 376 55861580 55861331 5.270000e-90 342.0
9 TraesCS2D01G199500 chr2B 95.781 1280 45 5 759 2037 209100208 209098937 0.000000e+00 2056.0
10 TraesCS2D01G199500 chr2B 92.879 1334 56 14 3566 4875 209097880 209096562 0.000000e+00 1901.0
11 TraesCS2D01G199500 chr2B 85.403 781 73 20 2772 3544 209098414 209097667 0.000000e+00 773.0
12 TraesCS2D01G199500 chr2B 91.533 437 17 9 4908 5328 209096324 209095892 7.930000e-163 584.0
13 TraesCS2D01G199500 chr2B 90.489 368 29 4 375 739 363635897 363636261 1.070000e-131 481.0
14 TraesCS2D01G199500 chr2B 90.270 370 24 7 3 370 363635441 363635800 1.790000e-129 473.0
15 TraesCS2D01G199500 chr2B 89.062 192 15 4 2402 2588 209098774 209098584 3.310000e-57 233.0
16 TraesCS2D01G199500 chr2B 97.500 120 3 0 5373 5492 209095585 209095466 7.210000e-49 206.0
17 TraesCS2D01G199500 chr6A 91.247 377 20 8 3 376 93167256 93167622 8.210000e-138 501.0
18 TraesCS2D01G199500 chr6A 89.973 369 27 7 375 739 58147941 58148303 8.330000e-128 468.0
19 TraesCS2D01G199500 chr6A 90.191 367 24 8 375 731 93167718 93168082 8.330000e-128 468.0
20 TraesCS2D01G199500 chr6A 90.698 301 16 7 79 376 58147553 58147844 1.850000e-104 390.0
21 TraesCS2D01G199500 chr1B 91.223 376 20 8 3 376 667908028 667908392 2.950000e-137 499.0
22 TraesCS2D01G199500 chr1B 90.541 370 21 9 3 370 338015841 338016198 1.380000e-130 477.0
23 TraesCS2D01G199500 chr3D 90.885 373 26 6 375 743 48169660 48169292 1.370000e-135 494.0
24 TraesCS2D01G199500 chr3D 87.936 373 15 12 7 376 48170093 48169748 3.960000e-111 412.0
25 TraesCS2D01G199500 chr7A 90.691 376 21 7 3 376 6780274 6779911 6.390000e-134 488.0
26 TraesCS2D01G199500 chr7A 90.027 371 32 3 375 742 6779815 6779447 4.980000e-130 475.0
27 TraesCS2D01G199500 chr3B 90.515 369 29 4 375 739 74727544 74727910 2.970000e-132 483.0
28 TraesCS2D01G199500 chr3B 89.145 304 18 9 79 376 683393688 683393394 1.120000e-96 364.0
29 TraesCS2D01G199500 chr5A 90.160 376 26 7 3 376 379035835 379036201 3.850000e-131 479.0
30 TraesCS2D01G199500 chr5A 89.894 376 27 7 3 376 166541469 166541103 1.790000e-129 473.0
31 TraesCS2D01G199500 chr5A 89.785 372 31 4 375 742 420392174 420391806 2.320000e-128 470.0
32 TraesCS2D01G199500 chr5A 89.544 373 33 4 375 743 269853249 269852879 8.330000e-128 468.0
33 TraesCS2D01G199500 chr5A 88.542 384 28 10 375 744 379036292 379036673 8.390000e-123 451.0
34 TraesCS2D01G199500 chr5A 88.587 368 22 11 3 368 269853704 269853355 3.930000e-116 429.0
35 TraesCS2D01G199500 chr6B 90.667 300 17 7 79 376 27184356 27184066 6.670000e-104 388.0
36 TraesCS2D01G199500 chr3A 100.000 30 0 0 2041 2070 12781971 12781942 7.690000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G199500 chr2D 150390253 150395744 5491 True 3496.666667 10142 98.680000 1 5492 3 chr2D.!!$R1 5491
1 TraesCS2D01G199500 chr2A 151251309 151256591 5282 False 1432.800000 3245 95.469800 743 5492 5 chr2A.!!$F1 4749
2 TraesCS2D01G199500 chr2B 209095466 209100208 4742 True 958.833333 2056 92.026333 759 5492 6 chr2B.!!$R1 4733
3 TraesCS2D01G199500 chr2B 363635441 363636261 820 False 477.000000 481 90.379500 3 739 2 chr2B.!!$F1 736
4 TraesCS2D01G199500 chr6A 93167256 93168082 826 False 484.500000 501 90.719000 3 731 2 chr6A.!!$F2 728
5 TraesCS2D01G199500 chr6A 58147553 58148303 750 False 429.000000 468 90.335500 79 739 2 chr6A.!!$F1 660
6 TraesCS2D01G199500 chr3D 48169292 48170093 801 True 453.000000 494 89.410500 7 743 2 chr3D.!!$R1 736
7 TraesCS2D01G199500 chr7A 6779447 6780274 827 True 481.500000 488 90.359000 3 742 2 chr7A.!!$R1 739
8 TraesCS2D01G199500 chr5A 379035835 379036673 838 False 465.000000 479 89.351000 3 744 2 chr5A.!!$F1 741
9 TraesCS2D01G199500 chr5A 269852879 269853704 825 True 448.500000 468 89.065500 3 743 2 chr5A.!!$R3 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 505 1.267806 TGCTTCTTGTGCTAGCTTTGC 59.732 47.619 17.23 10.64 35.93 3.68 F
1695 1818 0.179113 GTGCCCACACCAAGTTTGTG 60.179 55.000 5.57 5.57 43.44 3.33 F
2686 2901 0.034896 ACCTACAAGGCCACAGTTCG 59.965 55.000 5.01 0.00 39.63 3.95 F
2789 3004 0.321653 GAAGGCCACAGTTCGGATGT 60.322 55.000 5.01 0.00 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1789 1912 0.603065 ACAAATTTCTGCGAAGGGGC 59.397 50.0 0.00 0.00 0.0 5.80 R
2860 3075 0.110486 ATTGGTGTTTCGCAGGGAGT 59.890 50.0 0.00 0.00 0.0 3.85 R
3882 4388 0.803768 CCTCTGCACGAATCTCACCG 60.804 60.0 0.00 0.00 0.0 4.94 R
4765 5281 0.108992 CTGCACGGCCGTTCTAACTA 60.109 55.0 32.11 6.36 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 198 4.081862 CGGGTGATAGTTTAGACCTTGACA 60.082 45.833 0.00 0.00 0.00 3.58
193 199 5.395324 CGGGTGATAGTTTAGACCTTGACAT 60.395 44.000 0.00 0.00 0.00 3.06
196 202 6.535508 GGTGATAGTTTAGACCTTGACATGTC 59.464 42.308 19.27 19.27 0.00 3.06
198 204 7.602644 GTGATAGTTTAGACCTTGACATGTCAA 59.397 37.037 33.20 33.20 46.27 3.18
199 205 7.602644 TGATAGTTTAGACCTTGACATGTCAAC 59.397 37.037 32.36 23.69 43.90 3.18
200 206 4.750098 AGTTTAGACCTTGACATGTCAACG 59.250 41.667 32.36 28.98 43.90 4.10
201 207 4.594123 TTAGACCTTGACATGTCAACGA 57.406 40.909 32.36 18.67 43.90 3.85
202 208 3.032017 AGACCTTGACATGTCAACGAG 57.968 47.619 32.36 25.11 43.90 4.18
203 209 2.365617 AGACCTTGACATGTCAACGAGT 59.634 45.455 32.36 27.57 43.90 4.18
204 210 2.476619 GACCTTGACATGTCAACGAGTG 59.523 50.000 32.36 22.81 43.90 3.51
205 211 2.102420 ACCTTGACATGTCAACGAGTGA 59.898 45.455 32.36 14.47 43.90 3.41
206 212 3.244215 ACCTTGACATGTCAACGAGTGAT 60.244 43.478 32.36 11.11 43.90 3.06
207 213 3.124128 CCTTGACATGTCAACGAGTGATG 59.876 47.826 32.36 20.95 43.90 3.07
208 214 3.385193 TGACATGTCAACGAGTGATGT 57.615 42.857 26.02 0.00 38.90 3.06
227 233 2.736236 CTGAGCTGTGTTCGCGCT 60.736 61.111 5.56 0.00 36.57 5.92
329 339 9.770503 CTACCATGTATATACACGAATCAGTAC 57.229 37.037 17.69 0.00 39.30 2.73
395 505 1.267806 TGCTTCTTGTGCTAGCTTTGC 59.732 47.619 17.23 10.64 35.93 3.68
562 685 8.424918 TCTCTTCCCTTTCTTGATGACATATAC 58.575 37.037 0.00 0.00 0.00 1.47
569 692 8.424918 CCTTTCTTGATGACATATACTACCACT 58.575 37.037 0.00 0.00 0.00 4.00
592 715 8.388103 CACTAGGGATAAAATTGTCTTTGTACG 58.612 37.037 0.00 0.00 0.00 3.67
654 777 3.187842 GTCACGTAGGGAACAAAATGGAC 59.812 47.826 0.00 0.00 0.00 4.02
739 862 6.741724 AGAAAGGGCCAAATAAGGAATTCTA 58.258 36.000 6.18 0.00 0.00 2.10
744 867 6.779539 AGGGCCAAATAAGGAATTCTATCTTG 59.220 38.462 6.18 3.67 0.00 3.02
745 868 6.551227 GGGCCAAATAAGGAATTCTATCTTGT 59.449 38.462 4.39 0.00 0.00 3.16
746 869 7.069950 GGGCCAAATAAGGAATTCTATCTTGTT 59.930 37.037 4.39 2.69 0.00 2.83
747 870 8.478066 GGCCAAATAAGGAATTCTATCTTGTTT 58.522 33.333 5.23 8.28 34.00 2.83
757 880 8.180920 GGAATTCTATCTTGTTTTTCTCTGAGC 58.819 37.037 5.23 0.00 0.00 4.26
762 885 4.978099 TCTTGTTTTTCTCTGAGCAGGAT 58.022 39.130 0.00 0.00 0.00 3.24
1536 1659 0.179145 CGGACATGGAGACGGTGTAC 60.179 60.000 0.00 0.00 32.73 2.90
1629 1752 1.993948 GGCCTCCGGGAAGGTTACT 60.994 63.158 10.72 0.00 41.99 2.24
1680 1803 1.001378 GATTATGATGCCGTTGGTGCC 60.001 52.381 0.00 0.00 0.00 5.01
1695 1818 0.179113 GTGCCCACACCAAGTTTGTG 60.179 55.000 5.57 5.57 43.44 3.33
1843 1967 8.641498 AGAATTGGAGTCAAATATGAAGTGTT 57.359 30.769 0.00 0.00 37.30 3.32
1867 1991 3.851403 GCACATACAACAATTAAGCCACG 59.149 43.478 0.00 0.00 0.00 4.94
1870 1994 5.567534 CACATACAACAATTAAGCCACGTTC 59.432 40.000 0.00 0.00 0.00 3.95
1878 2002 3.775261 TTAAGCCACGTTCCTTACCTT 57.225 42.857 4.60 0.00 0.00 3.50
1913 2037 4.927425 CAGGAATTTGCATTGAACCTTCAG 59.073 41.667 0.00 0.00 38.61 3.02
1998 2122 1.816835 TGCTAGTTACACGTCTCCCAG 59.183 52.381 0.00 0.00 0.00 4.45
2050 2174 7.757242 AAGATTTTGTATTCTACTCCCTCCT 57.243 36.000 0.00 0.00 0.00 3.69
2066 2190 5.755849 TCCCTCCTTTCCATAATTCTTGTC 58.244 41.667 0.00 0.00 0.00 3.18
2114 2238 5.690865 AGGATAACTGTTGGTGACTTTGAA 58.309 37.500 2.69 0.00 0.00 2.69
2115 2239 6.306987 AGGATAACTGTTGGTGACTTTGAAT 58.693 36.000 2.69 0.00 0.00 2.57
2119 2243 8.691661 ATAACTGTTGGTGACTTTGAATTACT 57.308 30.769 2.69 0.00 0.00 2.24
2147 2271 5.178623 GCTATGCTTAGTGTGTGTGTTTGTA 59.821 40.000 8.30 0.00 0.00 2.41
2175 2299 4.725490 TGTGATAGACTATCCATCGTCCA 58.275 43.478 17.92 0.00 34.26 4.02
2295 2421 9.847224 CCCTATGTTAATGGTTCACTTATACTT 57.153 33.333 0.00 0.00 0.00 2.24
2317 2443 2.810274 CACTTCCACATCCTGAACTGTG 59.190 50.000 0.00 0.00 41.89 3.66
2538 2669 6.052405 AATGCATGACATAACCAAATTGGT 57.948 33.333 12.63 12.63 46.44 3.67
2686 2901 0.034896 ACCTACAAGGCCACAGTTCG 59.965 55.000 5.01 0.00 39.63 3.95
2765 2980 5.558818 AGATCCTGCAATCAATATCCACTC 58.441 41.667 1.40 0.00 0.00 3.51
2769 2984 3.819337 CTGCAATCAATATCCACTCCCTG 59.181 47.826 0.00 0.00 0.00 4.45
2770 2985 3.152341 GCAATCAATATCCACTCCCTGG 58.848 50.000 0.00 0.00 42.29 4.45
2784 2999 3.972227 CTGGAAGGCCACAGTTCG 58.028 61.111 5.01 0.00 39.92 3.95
2785 3000 1.672356 CTGGAAGGCCACAGTTCGG 60.672 63.158 5.01 0.00 39.92 4.30
2786 3001 2.111999 CTGGAAGGCCACAGTTCGGA 62.112 60.000 5.01 0.00 39.92 4.55
2787 3002 1.299976 GGAAGGCCACAGTTCGGAT 59.700 57.895 5.01 0.00 0.00 4.18
2788 3003 1.026718 GGAAGGCCACAGTTCGGATG 61.027 60.000 5.01 0.00 0.00 3.51
2789 3004 0.321653 GAAGGCCACAGTTCGGATGT 60.322 55.000 5.01 0.00 0.00 3.06
2790 3005 0.606401 AAGGCCACAGTTCGGATGTG 60.606 55.000 5.01 5.03 46.11 3.21
2791 3006 2.690778 GGCCACAGTTCGGATGTGC 61.691 63.158 0.00 3.06 45.37 4.57
2792 3007 1.672356 GCCACAGTTCGGATGTGCT 60.672 57.895 6.27 0.00 45.37 4.40
2793 3008 0.391130 GCCACAGTTCGGATGTGCTA 60.391 55.000 6.27 0.00 45.37 3.49
2794 3009 1.743772 GCCACAGTTCGGATGTGCTAT 60.744 52.381 6.27 0.00 45.37 2.97
2795 3010 2.632377 CCACAGTTCGGATGTGCTATT 58.368 47.619 6.27 0.00 45.37 1.73
2796 3011 2.352651 CCACAGTTCGGATGTGCTATTG 59.647 50.000 6.27 0.00 45.37 1.90
2797 3012 2.352651 CACAGTTCGGATGTGCTATTGG 59.647 50.000 0.00 0.00 41.39 3.16
2798 3013 2.027192 ACAGTTCGGATGTGCTATTGGT 60.027 45.455 0.00 0.00 0.00 3.67
2799 3014 3.009723 CAGTTCGGATGTGCTATTGGTT 58.990 45.455 0.00 0.00 0.00 3.67
2800 3015 3.440173 CAGTTCGGATGTGCTATTGGTTT 59.560 43.478 0.00 0.00 0.00 3.27
2801 3016 4.079253 AGTTCGGATGTGCTATTGGTTTT 58.921 39.130 0.00 0.00 0.00 2.43
2802 3017 5.123186 CAGTTCGGATGTGCTATTGGTTTTA 59.877 40.000 0.00 0.00 0.00 1.52
2803 3018 5.354234 AGTTCGGATGTGCTATTGGTTTTAG 59.646 40.000 0.00 0.00 0.00 1.85
2804 3019 3.625764 TCGGATGTGCTATTGGTTTTAGC 59.374 43.478 0.00 0.00 41.95 3.09
2814 3029 7.041107 TGCTATTGGTTTTAGCAAATCATTCC 58.959 34.615 3.06 0.00 46.69 3.01
2815 3030 7.093377 TGCTATTGGTTTTAGCAAATCATTCCT 60.093 33.333 3.06 0.00 46.69 3.36
2816 3031 7.436376 GCTATTGGTTTTAGCAAATCATTCCTC 59.564 37.037 0.00 0.00 39.20 3.71
2817 3032 6.916360 TTGGTTTTAGCAAATCATTCCTCT 57.084 33.333 0.00 0.00 32.83 3.69
2818 3033 6.271488 TGGTTTTAGCAAATCATTCCTCTG 57.729 37.500 0.00 0.00 27.22 3.35
2819 3034 6.009589 TGGTTTTAGCAAATCATTCCTCTGA 58.990 36.000 0.00 0.00 27.22 3.27
2820 3035 6.151648 TGGTTTTAGCAAATCATTCCTCTGAG 59.848 38.462 0.00 0.00 27.22 3.35
2821 3036 6.375455 GGTTTTAGCAAATCATTCCTCTGAGA 59.625 38.462 6.17 0.00 0.00 3.27
2822 3037 7.067981 GGTTTTAGCAAATCATTCCTCTGAGAT 59.932 37.037 6.17 0.00 0.00 2.75
2823 3038 8.465201 GTTTTAGCAAATCATTCCTCTGAGATT 58.535 33.333 6.17 0.00 32.45 2.40
2824 3039 9.685276 TTTTAGCAAATCATTCCTCTGAGATTA 57.315 29.630 6.17 0.00 31.01 1.75
2825 3040 8.899427 TTAGCAAATCATTCCTCTGAGATTAG 57.101 34.615 6.17 0.00 31.01 1.73
2826 3041 7.134362 AGCAAATCATTCCTCTGAGATTAGA 57.866 36.000 6.17 0.00 31.01 2.10
2827 3042 7.747690 AGCAAATCATTCCTCTGAGATTAGAT 58.252 34.615 6.17 1.95 31.01 1.98
2828 3043 8.219178 AGCAAATCATTCCTCTGAGATTAGATT 58.781 33.333 6.17 7.70 31.01 2.40
2829 3044 9.499479 GCAAATCATTCCTCTGAGATTAGATTA 57.501 33.333 6.17 0.00 31.01 1.75
2834 3049 8.976353 TCATTCCTCTGAGATTAGATTATAGGC 58.024 37.037 6.17 0.00 0.00 3.93
2835 3050 8.756927 CATTCCTCTGAGATTAGATTATAGGCA 58.243 37.037 6.17 0.00 0.00 4.75
2836 3051 8.727100 TTCCTCTGAGATTAGATTATAGGCAA 57.273 34.615 6.17 0.00 0.00 4.52
2837 3052 8.907829 TCCTCTGAGATTAGATTATAGGCAAT 57.092 34.615 6.17 0.00 0.00 3.56
2838 3053 9.331466 TCCTCTGAGATTAGATTATAGGCAATT 57.669 33.333 6.17 0.00 0.00 2.32
2957 3172 8.656849 CAATTGAGAGTGCGTACTATAGTTTTT 58.343 33.333 11.40 0.00 37.25 1.94
3004 3266 2.656947 TGAAAAGGTGGTCTCCTTGG 57.343 50.000 5.25 0.00 45.79 3.61
3014 3276 3.898123 GTGGTCTCCTTGGATAGCATCTA 59.102 47.826 9.53 0.00 0.00 1.98
3041 3303 2.618816 GGATGCACAAACTGGGATCTGA 60.619 50.000 0.00 0.00 0.00 3.27
3052 3314 7.615365 ACAAACTGGGATCTGATATGCTTTTTA 59.385 33.333 0.00 0.00 0.00 1.52
3089 3351 4.455606 ACAGAGTGCTATTTTATCCAGCC 58.544 43.478 0.00 0.00 34.31 4.85
3263 3528 2.224018 GCTGTTCTCAGAGATGGGCTAG 60.224 54.545 0.00 0.00 43.76 3.42
3468 3733 9.914131 ATCTTCTTTATACAAGCAAAGTTTTCC 57.086 29.630 0.00 0.00 34.17 3.13
3469 3734 8.357402 TCTTCTTTATACAAGCAAAGTTTTCCC 58.643 33.333 0.00 0.00 34.17 3.97
3470 3735 6.988522 TCTTTATACAAGCAAAGTTTTCCCC 58.011 36.000 0.00 0.00 34.17 4.81
3471 3736 5.731957 TTATACAAGCAAAGTTTTCCCCC 57.268 39.130 0.00 0.00 0.00 5.40
3495 3999 3.565764 TCCCATCCTTGATCACATCAC 57.434 47.619 0.00 0.00 39.39 3.06
3506 4012 5.261209 TGATCACATCACATGATACACGA 57.739 39.130 0.00 0.00 36.92 4.35
3525 4031 6.106003 ACACGAGTATCTTGTTTCATATGCA 58.894 36.000 0.00 0.00 46.19 3.96
3544 4050 8.648097 CATATGCATATTCGACTGTAGTTTACC 58.352 37.037 16.71 0.00 0.00 2.85
3637 4143 3.999001 TCTTAGATGACACTGCTGCTTTG 59.001 43.478 0.00 0.03 0.00 2.77
3651 4157 5.288804 TGCTGCTTTGAATAGTTTTGAACC 58.711 37.500 0.00 0.00 0.00 3.62
3652 4158 5.068987 TGCTGCTTTGAATAGTTTTGAACCT 59.931 36.000 0.00 0.00 0.00 3.50
3788 4294 6.734104 TCTAGACTTCGAGTGTAGTTTACC 57.266 41.667 14.38 0.00 41.35 2.85
3882 4388 1.065551 GCACTTTTCACTGGTGACACC 59.934 52.381 18.28 18.28 39.66 4.16
3981 4487 2.224670 TGTCCCTGGCGTTCTGTTTATT 60.225 45.455 0.00 0.00 0.00 1.40
4033 4539 0.035458 CTCCTTCCTGAACCGTGCTT 59.965 55.000 0.00 0.00 0.00 3.91
4068 4574 1.538204 GCTCCGATCCTCGTTATTGCA 60.538 52.381 0.00 0.00 38.40 4.08
4083 4589 0.726827 TTGCAACGAATCGAGGCATC 59.273 50.000 21.27 0.00 38.54 3.91
4523 5029 0.246360 GCAATGTAACTGGGGTTGGC 59.754 55.000 0.00 0.00 36.92 4.52
4527 5033 0.847373 TGTAACTGGGGTTGGCTTGA 59.153 50.000 0.00 0.00 36.92 3.02
4528 5034 1.427368 TGTAACTGGGGTTGGCTTGAT 59.573 47.619 0.00 0.00 36.92 2.57
4529 5035 1.818674 GTAACTGGGGTTGGCTTGATG 59.181 52.381 0.00 0.00 36.92 3.07
4531 5037 1.077265 CTGGGGTTGGCTTGATGGT 59.923 57.895 0.00 0.00 0.00 3.55
4730 5246 8.110612 GTGTCATCAGTTTATATGTCGTTTCTG 58.889 37.037 0.00 0.00 0.00 3.02
4765 5281 1.152546 GGGGGAAAAGGTGCACACT 60.153 57.895 20.43 10.61 0.00 3.55
4835 5765 2.814280 AGTGTCTCAAACCGTAGTGG 57.186 50.000 0.00 0.00 46.41 4.00
4836 5766 1.343465 AGTGTCTCAAACCGTAGTGGG 59.657 52.381 0.00 0.00 44.64 4.61
4859 5789 2.614983 TGCCCTAAAACGTGTCTCAAAC 59.385 45.455 0.00 0.00 0.00 2.93
4861 5791 2.222445 CCCTAAAACGTGTCTCAAACCG 59.778 50.000 0.00 0.00 0.00 4.44
4862 5792 2.867975 CCTAAAACGTGTCTCAAACCGT 59.132 45.455 0.00 0.00 36.67 4.83
4944 6080 5.523438 AAGTACAGTAGCTGAGGAATAGC 57.477 43.478 0.00 0.00 41.43 2.97
4958 6094 5.766670 TGAGGAATAGCATTTGATCACATCC 59.233 40.000 0.00 0.00 0.00 3.51
4961 6097 2.048444 AGCATTTGATCACATCCGCT 57.952 45.000 0.00 0.00 0.00 5.52
5085 6237 1.512734 GCGCAAGGTGATTTCGCAG 60.513 57.895 0.30 0.00 44.50 5.18
5417 6832 4.115199 AATCCAGCGACCCCAGCC 62.115 66.667 0.00 0.00 34.64 4.85
5478 6893 2.905996 AACTGGATTGCTGCCCGGA 61.906 57.895 0.73 0.00 33.14 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.117145 CAACCACGACAAAATATATCATATTGC 57.883 33.333 0.00 0.00 0.00 3.56
1 2 9.611284 CCAACCACGACAAAATATATCATATTG 57.389 33.333 0.00 0.00 0.00 1.90
70 71 7.691213 TCATATTATTATTAGTCCCCCGCAAA 58.309 34.615 0.00 0.00 0.00 3.68
114 115 3.702045 GTCTACAGTAGAGGCTGAATGGT 59.298 47.826 10.81 0.00 39.62 3.55
192 198 2.562738 TCAGGACATCACTCGTTGACAT 59.437 45.455 0.00 0.00 36.92 3.06
193 199 1.960689 TCAGGACATCACTCGTTGACA 59.039 47.619 0.00 0.00 36.92 3.58
196 202 1.067283 AGCTCAGGACATCACTCGTTG 60.067 52.381 0.00 0.00 0.00 4.10
198 204 0.529833 CAGCTCAGGACATCACTCGT 59.470 55.000 0.00 0.00 0.00 4.18
199 205 0.529833 ACAGCTCAGGACATCACTCG 59.470 55.000 0.00 0.00 0.00 4.18
200 206 1.274728 ACACAGCTCAGGACATCACTC 59.725 52.381 0.00 0.00 0.00 3.51
201 207 1.346062 ACACAGCTCAGGACATCACT 58.654 50.000 0.00 0.00 0.00 3.41
202 208 2.072298 GAACACAGCTCAGGACATCAC 58.928 52.381 0.00 0.00 0.00 3.06
203 209 1.337167 CGAACACAGCTCAGGACATCA 60.337 52.381 0.00 0.00 0.00 3.07
204 210 1.354040 CGAACACAGCTCAGGACATC 58.646 55.000 0.00 0.00 0.00 3.06
205 211 0.671781 GCGAACACAGCTCAGGACAT 60.672 55.000 0.00 0.00 0.00 3.06
206 212 1.300931 GCGAACACAGCTCAGGACA 60.301 57.895 0.00 0.00 0.00 4.02
207 213 2.375766 CGCGAACACAGCTCAGGAC 61.376 63.158 0.00 0.00 0.00 3.85
208 214 2.049156 CGCGAACACAGCTCAGGA 60.049 61.111 0.00 0.00 0.00 3.86
329 339 4.474113 GCGGAATACTCTGGTAACTATCG 58.526 47.826 0.00 0.00 37.61 2.92
339 349 1.400371 CGATCTCGGCGGAATACTCTG 60.400 57.143 7.21 0.00 35.37 3.35
370 382 1.325943 GCTAGCACAAGAAGCATCGAC 59.674 52.381 10.63 0.00 36.26 4.20
468 584 6.238731 CCACGTTCAAATATTCATATGCACCT 60.239 38.462 0.00 0.00 0.00 4.00
506 622 7.119116 AGCGTGAATATGAATGTAAAGTGTTGA 59.881 33.333 0.00 0.00 0.00 3.18
562 685 8.893727 CAAAGACAATTTTATCCCTAGTGGTAG 58.106 37.037 0.00 0.00 34.77 3.18
569 692 8.095792 TGACGTACAAAGACAATTTTATCCCTA 58.904 33.333 0.00 0.00 0.00 3.53
592 715 3.492421 TCCGACGGTGTTAACTATGAC 57.508 47.619 14.79 0.00 0.00 3.06
702 825 6.007485 TGGCCCTTTCTTAAAATTTGGTTT 57.993 33.333 0.00 0.00 0.00 3.27
739 862 4.978099 TCCTGCTCAGAGAAAAACAAGAT 58.022 39.130 0.00 0.00 0.00 2.40
744 867 2.751806 CCCATCCTGCTCAGAGAAAAAC 59.248 50.000 0.00 0.00 0.00 2.43
745 868 2.291153 CCCCATCCTGCTCAGAGAAAAA 60.291 50.000 0.00 0.00 0.00 1.94
746 869 1.283029 CCCCATCCTGCTCAGAGAAAA 59.717 52.381 0.00 0.00 0.00 2.29
747 870 0.914644 CCCCATCCTGCTCAGAGAAA 59.085 55.000 0.00 0.00 0.00 2.52
757 880 4.371624 TGTAATGCTATTCCCCATCCTG 57.628 45.455 0.00 0.00 0.00 3.86
762 885 3.074390 CCCAGATGTAATGCTATTCCCCA 59.926 47.826 0.00 0.00 0.00 4.96
998 1121 3.207669 GCTTCAGCTCCGCCATGG 61.208 66.667 7.63 7.63 38.21 3.66
1059 1182 4.758251 CGGATGTGGGAGTGCGCA 62.758 66.667 5.66 5.66 34.23 6.09
1506 1629 1.418264 TCCATGTCCGTGGTCTTCAAA 59.582 47.619 5.48 0.00 40.27 2.69
1507 1630 1.001974 CTCCATGTCCGTGGTCTTCAA 59.998 52.381 5.48 0.00 40.27 2.69
1536 1659 1.153289 CATCTTCCCACCCAGCTCG 60.153 63.158 0.00 0.00 0.00 5.03
1680 1803 2.735126 GCACTTCACAAACTTGGTGTGG 60.735 50.000 4.83 0.00 45.27 4.17
1695 1818 3.851051 CTCTCCTTCAGGGCACTTC 57.149 57.895 0.00 0.00 35.41 3.01
1789 1912 0.603065 ACAAATTTCTGCGAAGGGGC 59.397 50.000 0.00 0.00 0.00 5.80
1843 1967 5.226396 GTGGCTTAATTGTTGTATGTGCAA 58.774 37.500 0.00 0.00 0.00 4.08
1867 1991 6.218746 TGTCGAGTTTCTAAAGGTAAGGAAC 58.781 40.000 0.00 0.00 33.34 3.62
1870 1994 5.047519 TCCTGTCGAGTTTCTAAAGGTAAGG 60.048 44.000 0.00 0.00 0.00 2.69
1878 2002 5.060506 TGCAAATTCCTGTCGAGTTTCTAA 58.939 37.500 0.00 0.00 28.54 2.10
1913 2037 8.145122 CCTTCAAGGTTTCTATCTACTACATCC 58.855 40.741 0.00 0.00 0.00 3.51
2034 2158 7.613551 TTATGGAAAGGAGGGAGTAGAATAC 57.386 40.000 0.00 0.00 43.47 1.89
2050 2174 8.610248 TTAGTTCACGACAAGAATTATGGAAA 57.390 30.769 0.00 0.00 0.00 3.13
2114 2238 5.129485 ACACACTAAGCATAGCCTGAGTAAT 59.871 40.000 0.00 0.00 31.96 1.89
2115 2239 4.466370 ACACACTAAGCATAGCCTGAGTAA 59.534 41.667 0.00 0.00 31.96 2.24
2119 2243 2.567169 ACACACACTAAGCATAGCCTGA 59.433 45.455 0.00 0.00 31.96 3.86
2147 2271 5.010112 CGATGGATAGTCTATCACAGTGGTT 59.990 44.000 19.33 2.84 34.48 3.67
2211 2335 7.136119 TGCAAACAGTAAAAATACTCCTTTCG 58.864 34.615 0.00 0.00 0.00 3.46
2282 2408 7.064728 GGATGTGGAAGTGAAGTATAAGTGAAC 59.935 40.741 0.00 0.00 0.00 3.18
2295 2421 2.705658 ACAGTTCAGGATGTGGAAGTGA 59.294 45.455 14.18 0.00 43.76 3.41
2296 2422 2.810274 CACAGTTCAGGATGTGGAAGTG 59.190 50.000 7.46 7.46 45.53 3.16
2411 2537 3.872771 GACTAGCTCGAGTAACTAGCAGT 59.127 47.826 19.52 8.24 39.36 4.40
2593 2805 4.816925 TGTGACGAACATGAAAATGTGGTA 59.183 37.500 0.00 0.00 34.56 3.25
2765 2980 1.303643 GAACTGTGGCCTTCCAGGG 60.304 63.158 17.96 0.65 44.48 4.45
2769 2984 1.026718 CATCCGAACTGTGGCCTTCC 61.027 60.000 3.32 0.00 0.00 3.46
2770 2985 0.321653 ACATCCGAACTGTGGCCTTC 60.322 55.000 3.32 0.00 0.00 3.46
2771 2986 0.606401 CACATCCGAACTGTGGCCTT 60.606 55.000 3.32 0.00 40.23 4.35
2772 2987 1.003355 CACATCCGAACTGTGGCCT 60.003 57.895 3.32 0.00 40.23 5.19
2773 2988 2.690778 GCACATCCGAACTGTGGCC 61.691 63.158 0.00 0.00 43.34 5.36
2774 2989 0.391130 TAGCACATCCGAACTGTGGC 60.391 55.000 11.98 6.33 43.34 5.01
2775 2990 2.315925 ATAGCACATCCGAACTGTGG 57.684 50.000 11.98 0.00 43.34 4.17
2776 2991 2.352651 CCAATAGCACATCCGAACTGTG 59.647 50.000 7.38 7.38 45.39 3.66
2777 2992 2.027192 ACCAATAGCACATCCGAACTGT 60.027 45.455 0.00 0.00 0.00 3.55
2778 2993 2.632377 ACCAATAGCACATCCGAACTG 58.368 47.619 0.00 0.00 0.00 3.16
2779 2994 3.350219 AACCAATAGCACATCCGAACT 57.650 42.857 0.00 0.00 0.00 3.01
2780 2995 4.434713 AAAACCAATAGCACATCCGAAC 57.565 40.909 0.00 0.00 0.00 3.95
2781 2996 4.095782 GCTAAAACCAATAGCACATCCGAA 59.904 41.667 0.91 0.00 44.11 4.30
2782 2997 3.625764 GCTAAAACCAATAGCACATCCGA 59.374 43.478 0.91 0.00 44.11 4.55
2783 2998 3.952535 GCTAAAACCAATAGCACATCCG 58.047 45.455 0.91 0.00 44.11 4.18
2790 3005 7.267857 AGGAATGATTTGCTAAAACCAATAGC 58.732 34.615 0.00 0.00 44.77 2.97
2791 3006 8.689972 AGAGGAATGATTTGCTAAAACCAATAG 58.310 33.333 0.00 0.00 33.10 1.73
2792 3007 8.469200 CAGAGGAATGATTTGCTAAAACCAATA 58.531 33.333 0.00 0.00 33.10 1.90
2793 3008 7.178983 TCAGAGGAATGATTTGCTAAAACCAAT 59.821 33.333 0.00 0.00 33.10 3.16
2794 3009 6.493115 TCAGAGGAATGATTTGCTAAAACCAA 59.507 34.615 0.00 0.00 33.10 3.67
2795 3010 6.009589 TCAGAGGAATGATTTGCTAAAACCA 58.990 36.000 0.00 0.00 33.10 3.67
2796 3011 6.375455 TCTCAGAGGAATGATTTGCTAAAACC 59.625 38.462 0.00 0.00 33.10 3.27
2797 3012 7.383102 TCTCAGAGGAATGATTTGCTAAAAC 57.617 36.000 0.00 0.00 33.10 2.43
2798 3013 8.585471 AATCTCAGAGGAATGATTTGCTAAAA 57.415 30.769 0.00 0.00 33.10 1.52
2799 3014 9.334947 CTAATCTCAGAGGAATGATTTGCTAAA 57.665 33.333 0.00 0.00 33.10 1.85
2800 3015 8.708378 TCTAATCTCAGAGGAATGATTTGCTAA 58.292 33.333 0.00 0.00 33.10 3.09
2801 3016 8.255111 TCTAATCTCAGAGGAATGATTTGCTA 57.745 34.615 0.00 0.00 33.10 3.49
2802 3017 7.134362 TCTAATCTCAGAGGAATGATTTGCT 57.866 36.000 0.00 0.00 36.05 3.91
2803 3018 7.982761 ATCTAATCTCAGAGGAATGATTTGC 57.017 36.000 0.00 0.00 32.33 3.68
2808 3023 8.976353 GCCTATAATCTAATCTCAGAGGAATGA 58.024 37.037 0.00 0.00 0.00 2.57
2809 3024 8.756927 TGCCTATAATCTAATCTCAGAGGAATG 58.243 37.037 0.00 0.00 0.00 2.67
2810 3025 8.907829 TGCCTATAATCTAATCTCAGAGGAAT 57.092 34.615 0.00 0.00 0.00 3.01
2811 3026 8.727100 TTGCCTATAATCTAATCTCAGAGGAA 57.273 34.615 0.00 0.00 0.00 3.36
2812 3027 8.907829 ATTGCCTATAATCTAATCTCAGAGGA 57.092 34.615 0.00 0.00 0.00 3.71
2838 3053 8.816894 GGAGTGGATATTGATTACAGGATCTTA 58.183 37.037 0.00 0.00 0.00 2.10
2839 3054 7.256835 GGGAGTGGATATTGATTACAGGATCTT 60.257 40.741 0.00 0.00 0.00 2.40
2840 3055 6.214412 GGGAGTGGATATTGATTACAGGATCT 59.786 42.308 0.00 0.00 0.00 2.75
2841 3056 6.214412 AGGGAGTGGATATTGATTACAGGATC 59.786 42.308 0.00 0.00 0.00 3.36
2842 3057 6.013032 CAGGGAGTGGATATTGATTACAGGAT 60.013 42.308 0.00 0.00 0.00 3.24
2843 3058 5.307976 CAGGGAGTGGATATTGATTACAGGA 59.692 44.000 0.00 0.00 0.00 3.86
2844 3059 5.555017 CAGGGAGTGGATATTGATTACAGG 58.445 45.833 0.00 0.00 0.00 4.00
2845 3060 4.999950 GCAGGGAGTGGATATTGATTACAG 59.000 45.833 0.00 0.00 0.00 2.74
2846 3061 4.503123 CGCAGGGAGTGGATATTGATTACA 60.503 45.833 0.00 0.00 0.00 2.41
2847 3062 3.997021 CGCAGGGAGTGGATATTGATTAC 59.003 47.826 0.00 0.00 0.00 1.89
2848 3063 3.901222 TCGCAGGGAGTGGATATTGATTA 59.099 43.478 0.00 0.00 0.00 1.75
2849 3064 2.705658 TCGCAGGGAGTGGATATTGATT 59.294 45.455 0.00 0.00 0.00 2.57
2850 3065 2.329267 TCGCAGGGAGTGGATATTGAT 58.671 47.619 0.00 0.00 0.00 2.57
2851 3066 1.788229 TCGCAGGGAGTGGATATTGA 58.212 50.000 0.00 0.00 0.00 2.57
2852 3067 2.614057 GTTTCGCAGGGAGTGGATATTG 59.386 50.000 0.00 0.00 0.00 1.90
2853 3068 2.238646 TGTTTCGCAGGGAGTGGATATT 59.761 45.455 0.00 0.00 0.00 1.28
2854 3069 1.837439 TGTTTCGCAGGGAGTGGATAT 59.163 47.619 0.00 0.00 0.00 1.63
2855 3070 1.066430 GTGTTTCGCAGGGAGTGGATA 60.066 52.381 0.00 0.00 0.00 2.59
2856 3071 0.321653 GTGTTTCGCAGGGAGTGGAT 60.322 55.000 0.00 0.00 0.00 3.41
2857 3072 1.070786 GTGTTTCGCAGGGAGTGGA 59.929 57.895 0.00 0.00 0.00 4.02
2858 3073 1.966451 GGTGTTTCGCAGGGAGTGG 60.966 63.158 0.00 0.00 0.00 4.00
2859 3074 0.817634 TTGGTGTTTCGCAGGGAGTG 60.818 55.000 0.00 0.00 0.00 3.51
2860 3075 0.110486 ATTGGTGTTTCGCAGGGAGT 59.890 50.000 0.00 0.00 0.00 3.85
2861 3076 0.804989 GATTGGTGTTTCGCAGGGAG 59.195 55.000 0.00 0.00 0.00 4.30
2862 3077 0.608035 GGATTGGTGTTTCGCAGGGA 60.608 55.000 0.00 0.00 0.00 4.20
2957 3172 6.881065 GGTATCAGCTAATCTTATGGCATGAA 59.119 38.462 10.98 0.00 0.00 2.57
3014 3276 1.546323 CCAGTTTGTGCATCCAGGACT 60.546 52.381 0.00 0.00 39.64 3.85
3052 3314 7.416964 AGCACTCTGTATTTCTCTATGAACT 57.583 36.000 0.00 0.00 33.88 3.01
3089 3351 7.632898 TCTTTTGTATAAGAGTGGAAGGATCCG 60.633 40.741 5.98 0.00 37.78 4.18
3224 3488 7.224297 AGAACAGCTTCTATTTCCTTGTACAA 58.776 34.615 8.28 8.28 34.74 2.41
3263 3528 7.327761 GCAGAATGTATGGATGCAAAATATGTC 59.672 37.037 0.00 0.00 39.31 3.06
3468 3733 1.918957 GATCAAGGATGGGATAGGGGG 59.081 57.143 0.00 0.00 0.00 5.40
3469 3734 2.307098 GTGATCAAGGATGGGATAGGGG 59.693 54.545 0.00 0.00 0.00 4.79
3470 3735 2.981784 TGTGATCAAGGATGGGATAGGG 59.018 50.000 0.00 0.00 0.00 3.53
3471 3736 4.287845 TGATGTGATCAAGGATGGGATAGG 59.712 45.833 0.00 0.00 36.11 2.57
3472 3737 5.221783 TGTGATGTGATCAAGGATGGGATAG 60.222 44.000 0.00 0.00 41.69 2.08
3473 3738 4.659835 TGTGATGTGATCAAGGATGGGATA 59.340 41.667 0.00 0.00 41.69 2.59
3474 3739 3.460712 TGTGATGTGATCAAGGATGGGAT 59.539 43.478 0.00 0.00 41.69 3.85
3475 3740 2.845586 TGTGATGTGATCAAGGATGGGA 59.154 45.455 0.00 0.00 41.69 4.37
3476 3741 3.286329 TGTGATGTGATCAAGGATGGG 57.714 47.619 0.00 0.00 41.69 4.00
3477 3742 4.457466 TCATGTGATGTGATCAAGGATGG 58.543 43.478 0.00 0.00 41.69 3.51
3478 3743 6.708949 TGTATCATGTGATGTGATCAAGGATG 59.291 38.462 0.00 0.00 41.69 3.51
3485 3989 5.284864 ACTCGTGTATCATGTGATGTGATC 58.715 41.667 5.78 0.00 37.48 2.92
3506 4012 9.710900 TCGAATATGCATATGAAACAAGATACT 57.289 29.630 19.77 0.00 0.00 2.12
3525 4031 5.585390 CCACGGTAAACTACAGTCGAATAT 58.415 41.667 0.00 0.00 34.89 1.28
3544 4050 5.844301 AAAAAGATAGCAAAAATGCCACG 57.156 34.783 0.00 0.00 34.90 4.94
3627 4133 5.403466 GGTTCAAAACTATTCAAAGCAGCAG 59.597 40.000 0.00 0.00 0.00 4.24
3767 4273 6.072286 CCAAGGTAAACTACACTCGAAGTCTA 60.072 42.308 0.00 0.00 0.00 2.59
3772 4278 3.896888 TCCCAAGGTAAACTACACTCGAA 59.103 43.478 0.00 0.00 0.00 3.71
3773 4279 3.499338 TCCCAAGGTAAACTACACTCGA 58.501 45.455 0.00 0.00 0.00 4.04
3882 4388 0.803768 CCTCTGCACGAATCTCACCG 60.804 60.000 0.00 0.00 0.00 4.94
3981 4487 3.515104 TGTCTAGCATGTGGACTTCATCA 59.485 43.478 13.07 0.00 0.00 3.07
4033 4539 1.407299 CGGAGCCATGTCATTCTCCAA 60.407 52.381 21.85 0.00 43.98 3.53
4068 4574 1.732259 GTTGTGATGCCTCGATTCGTT 59.268 47.619 5.89 0.00 0.00 3.85
4083 4589 2.104253 GGTCCCGCGTATGGTTGTG 61.104 63.158 4.92 0.00 0.00 3.33
4523 5029 4.503910 TCCAAGATACACGAACCATCAAG 58.496 43.478 0.00 0.00 0.00 3.02
4527 5033 5.871396 AGTATCCAAGATACACGAACCAT 57.129 39.130 15.20 0.00 0.00 3.55
4528 5034 5.046878 ACAAGTATCCAAGATACACGAACCA 60.047 40.000 15.20 0.00 0.00 3.67
4529 5035 5.416947 ACAAGTATCCAAGATACACGAACC 58.583 41.667 15.20 0.00 0.00 3.62
4531 5037 5.350365 GCAACAAGTATCCAAGATACACGAA 59.650 40.000 15.20 0.00 0.00 3.85
4730 5246 4.473444 TCCCCCAAAGAATAGCATTGATC 58.527 43.478 0.00 0.00 0.00 2.92
4765 5281 0.108992 CTGCACGGCCGTTCTAACTA 60.109 55.000 32.11 6.36 0.00 2.24
4812 5742 4.025145 CCACTACGGTTTGAGACACTTTTC 60.025 45.833 0.00 0.00 0.00 2.29
4880 5843 2.511600 ATTCGCGGCCAGTAGCAC 60.512 61.111 6.13 0.00 46.50 4.40
4944 6080 3.624410 TCTTGAGCGGATGTGATCAAATG 59.376 43.478 2.15 0.00 31.70 2.32
4958 6094 2.480419 AGGTTTCGTTTCATCTTGAGCG 59.520 45.455 0.00 0.00 0.00 5.03
4961 6097 5.505654 GCAGAAAGGTTTCGTTTCATCTTGA 60.506 40.000 14.30 0.00 39.67 3.02
5219 6371 3.148279 CCCGAGAAGGACGAGGGG 61.148 72.222 0.00 0.00 45.00 4.79
5292 6444 0.178801 AGGGGAAGGAAGTGGGGAAT 60.179 55.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.