Multiple sequence alignment - TraesCS2D01G196800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G196800 chr2D 100.000 3426 0 0 1 3426 143299685 143303110 0.000000e+00 6327
1 TraesCS2D01G196800 chr2D 95.092 163 6 1 3145 3305 425155681 425155519 4.390000e-64 255
2 TraesCS2D01G196800 chr2D 94.545 165 7 1 3144 3306 391812345 391812509 1.580000e-63 254
3 TraesCS2D01G196800 chr2A 88.719 2349 94 69 568 2859 158050760 158048526 0.000000e+00 2712
4 TraesCS2D01G196800 chr2A 95.122 123 5 1 3304 3426 158048307 158048186 3.490000e-45 193
5 TraesCS2D01G196800 chr2B 94.240 1632 50 20 226 1831 201365112 201366725 0.000000e+00 2453
6 TraesCS2D01G196800 chr2B 86.906 1199 66 36 1781 2944 201366714 201367856 0.000000e+00 1260
7 TraesCS2D01G196800 chr2B 96.186 236 7 1 1 236 201364814 201365047 5.360000e-103 385
8 TraesCS2D01G196800 chr2B 94.690 113 5 1 3314 3426 201368037 201368148 1.260000e-39 174
9 TraesCS2D01G196800 chr2B 91.892 74 2 1 3073 3146 201367962 201368031 2.180000e-17 100
10 TraesCS2D01G196800 chr4D 98.160 163 1 1 3145 3305 350246886 350246724 2.010000e-72 283
11 TraesCS2D01G196800 chr3D 95.092 163 6 1 3145 3305 486424787 486424949 4.390000e-64 255
12 TraesCS2D01G196800 chr3D 92.486 173 11 1 3135 3305 569577338 569577166 2.640000e-61 246
13 TraesCS2D01G196800 chr1D 94.545 165 7 1 3144 3306 311986775 311986611 1.580000e-63 254
14 TraesCS2D01G196800 chr7D 93.976 166 8 1 3145 3308 235502568 235502403 2.040000e-62 250
15 TraesCS2D01G196800 chr6A 91.713 181 10 3 3128 3305 73573733 73573911 2.640000e-61 246
16 TraesCS2D01G196800 chr6D 92.000 175 12 1 3143 3315 359354943 359354769 9.500000e-61 244


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G196800 chr2D 143299685 143303110 3425 False 6327.0 6327 100.0000 1 3426 1 chr2D.!!$F1 3425
1 TraesCS2D01G196800 chr2A 158048186 158050760 2574 True 1452.5 2712 91.9205 568 3426 2 chr2A.!!$R1 2858
2 TraesCS2D01G196800 chr2B 201364814 201368148 3334 False 874.4 2453 92.7828 1 3426 5 chr2B.!!$F1 3425

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 527 0.708802 TAGGGGGAGGAGACGTTTCT 59.291 55.0 6.02 0.0 33.37 2.52 F
2094 2265 0.039035 AGAACGGCTCTCCTCTGAGT 59.961 55.0 3.66 0.0 39.75 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2364 2554 0.028770 CAGGCTGTCGCGAACAAAAA 59.971 50.0 12.06 0.0 37.45 1.94 R
3097 3354 0.034059 GCCTGTATAGATGGCGTGCT 59.966 55.0 0.00 0.0 37.11 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 7.912056 TGAATCAAAGAAGTCATGAGTTAGG 57.088 36.000 15.77 6.26 0.00 2.69
111 112 4.655649 AGATGTCTCAGGGCATGTACAATA 59.344 41.667 12.43 0.00 32.34 1.90
123 124 6.765989 GGGCATGTACAATAGTGTCATCTTAA 59.234 38.462 0.00 0.00 39.30 1.85
129 130 8.717821 TGTACAATAGTGTCATCTTAAAAGTGC 58.282 33.333 0.00 0.00 39.30 4.40
156 157 6.630443 GCATAGAATAAATGCTGAGACAAACG 59.370 38.462 0.93 0.00 45.05 3.60
339 419 4.613265 TGGTTAGGAGGACAGTGGTATA 57.387 45.455 0.00 0.00 0.00 1.47
349 430 4.100189 AGGACAGTGGTATAATCTGCTCAC 59.900 45.833 0.00 0.00 33.12 3.51
360 441 9.807649 GGTATAATCTGCTCACAAAAATTCAAT 57.192 29.630 0.00 0.00 0.00 2.57
380 461 3.126001 TCACCAGACTTGACATTGGTC 57.874 47.619 0.00 0.00 41.81 4.02
391 472 6.748132 ACTTGACATTGGTCCTTACATTTTG 58.252 36.000 0.00 0.00 43.65 2.44
416 497 7.987458 TGCTAGATTTATTTCAGATTTCTCGGT 59.013 33.333 0.00 0.00 0.00 4.69
429 510 5.639506 AGATTTCTCGGTGATGTGTGTTTAG 59.360 40.000 0.00 0.00 0.00 1.85
430 511 3.313012 TCTCGGTGATGTGTGTTTAGG 57.687 47.619 0.00 0.00 0.00 2.69
445 526 1.565067 TTAGGGGGAGGAGACGTTTC 58.435 55.000 0.00 0.00 0.00 2.78
446 527 0.708802 TAGGGGGAGGAGACGTTTCT 59.291 55.000 6.02 0.00 33.37 2.52
469 550 4.351938 CCACGAAGGCGACCGTCA 62.352 66.667 11.02 0.00 41.64 4.35
499 580 1.201877 CGGTCTTAAAACGATGTGCCG 60.202 52.381 0.00 0.00 0.00 5.69
503 584 3.185797 GTCTTAAAACGATGTGCCGTCTT 59.814 43.478 0.00 0.00 42.54 3.01
509 590 3.247006 ACGATGTGCCGTCTTAATCTT 57.753 42.857 0.00 0.00 38.56 2.40
939 1037 1.042003 TCAAACAAAGCCCTGCTGCA 61.042 50.000 0.88 0.88 39.62 4.41
1077 1181 1.226603 CGTCGATTCCCGTCTCCAC 60.227 63.158 0.00 0.00 39.75 4.02
1103 1212 3.274288 GCACATCGATTCTCTTTCCCTT 58.726 45.455 0.00 0.00 0.00 3.95
1111 1220 1.004918 CTCTTTCCCTTCGCGGTGT 60.005 57.895 6.13 0.00 0.00 4.16
1121 1230 0.179040 TTCGCGGTGTTCCTTTCCTT 60.179 50.000 6.13 0.00 0.00 3.36
1185 1294 4.700448 TACGGGGACAAGGGCGGA 62.700 66.667 0.00 0.00 0.00 5.54
1377 1486 2.500098 TCGTCCCATCTCCTCGATTTTT 59.500 45.455 0.00 0.00 0.00 1.94
1416 1526 3.363426 CGAGCGCTAGATTAGATCAAAGC 59.637 47.826 11.50 0.00 37.26 3.51
1422 1532 1.490490 AGATTAGATCAAAGCCGGCCA 59.510 47.619 26.15 4.89 0.00 5.36
1455 1565 2.158564 GGAGGGCTGGAAATCATGATCA 60.159 50.000 9.06 0.00 0.00 2.92
1581 1694 3.075005 CCTCGGGAAAGGGCGAGA 61.075 66.667 0.00 0.00 32.35 4.04
1726 1840 0.676466 AAATTGACGGCTCGGATGCA 60.676 50.000 0.00 0.00 34.04 3.96
1760 1875 0.962356 GTTGTGTAGCCAGCAGCCAT 60.962 55.000 0.00 0.00 45.47 4.40
1761 1876 0.677731 TTGTGTAGCCAGCAGCCATC 60.678 55.000 0.00 0.00 45.47 3.51
1762 1877 1.821332 GTGTAGCCAGCAGCCATCC 60.821 63.158 0.00 0.00 45.47 3.51
1763 1878 1.997311 TGTAGCCAGCAGCCATCCT 60.997 57.895 0.00 0.00 45.47 3.24
1773 1888 0.824109 CAGCCATCCTCACTAACCGA 59.176 55.000 0.00 0.00 0.00 4.69
1832 1986 2.124122 GTTTCACATGCGTTTTGGACC 58.876 47.619 0.00 0.00 0.00 4.46
1881 2041 9.686683 ATGTTCTTGTATAGAAATAGGCTTTGT 57.313 29.630 0.00 0.00 44.25 2.83
1998 2161 4.122776 CTCTGACCCAAGATTATCAACCG 58.877 47.826 0.00 0.00 0.00 4.44
2046 2209 3.266541 TGCTCACGCACTAATTGTTTG 57.733 42.857 0.00 0.00 42.25 2.93
2049 2212 4.454161 TGCTCACGCACTAATTGTTTGTAT 59.546 37.500 0.00 0.00 42.25 2.29
2052 2223 5.242434 TCACGCACTAATTGTTTGTATCCT 58.758 37.500 0.00 0.00 0.00 3.24
2091 2262 0.891373 TGAAGAACGGCTCTCCTCTG 59.109 55.000 0.00 0.00 31.02 3.35
2092 2263 1.178276 GAAGAACGGCTCTCCTCTGA 58.822 55.000 0.00 0.00 31.02 3.27
2093 2264 1.134175 GAAGAACGGCTCTCCTCTGAG 59.866 57.143 0.00 0.00 40.17 3.35
2094 2265 0.039035 AGAACGGCTCTCCTCTGAGT 59.961 55.000 3.66 0.00 39.75 3.41
2095 2266 0.454196 GAACGGCTCTCCTCTGAGTC 59.546 60.000 3.66 0.00 39.75 3.36
2096 2267 0.968393 AACGGCTCTCCTCTGAGTCC 60.968 60.000 3.66 0.00 39.75 3.85
2097 2268 1.077068 CGGCTCTCCTCTGAGTCCT 60.077 63.158 3.66 0.00 39.75 3.85
2098 2269 1.101049 CGGCTCTCCTCTGAGTCCTC 61.101 65.000 3.66 0.00 39.75 3.71
2099 2270 0.258774 GGCTCTCCTCTGAGTCCTCT 59.741 60.000 3.66 0.00 39.75 3.69
2142 2313 9.682465 TCAGATTGATTACAGTACAGTACTAGT 57.318 33.333 13.12 14.72 37.23 2.57
2178 2349 1.649171 CGCGCACTAAACTGTCAGTAG 59.351 52.381 8.75 3.49 0.00 2.57
2179 2350 2.673833 GCGCACTAAACTGTCAGTAGT 58.326 47.619 5.77 4.18 0.00 2.73
2180 2351 3.668757 CGCGCACTAAACTGTCAGTAGTA 60.669 47.826 8.75 1.25 0.00 1.82
2312 2502 4.507710 TGCCAGTATATTATGCAGCTAGC 58.492 43.478 6.62 6.62 45.96 3.42
2313 2503 3.873952 GCCAGTATATTATGCAGCTAGCC 59.126 47.826 12.13 0.00 44.83 3.93
2314 2504 4.623886 GCCAGTATATTATGCAGCTAGCCA 60.624 45.833 12.13 3.23 44.83 4.75
2315 2505 5.114780 CCAGTATATTATGCAGCTAGCCAG 58.885 45.833 12.13 5.68 44.83 4.85
2360 2550 4.212143 TCTGTCTCATGATTCCCTTGTG 57.788 45.455 0.00 0.00 0.00 3.33
2361 2551 3.840078 TCTGTCTCATGATTCCCTTGTGA 59.160 43.478 0.00 0.00 0.00 3.58
2362 2552 4.472470 TCTGTCTCATGATTCCCTTGTGAT 59.528 41.667 0.00 0.00 0.00 3.06
2363 2553 5.662657 TCTGTCTCATGATTCCCTTGTGATA 59.337 40.000 0.00 0.00 0.00 2.15
2364 2554 6.328410 TCTGTCTCATGATTCCCTTGTGATAT 59.672 38.462 0.00 0.00 0.00 1.63
2372 2562 9.090692 CATGATTCCCTTGTGATATTTTTGTTC 57.909 33.333 0.00 0.00 0.00 3.18
2511 2707 5.817816 GGAGAAATGCTGCTAGTAGCTTAAA 59.182 40.000 29.40 12.97 42.97 1.52
2657 2860 8.255206 TGTGTATATTGTGTCGGTTTATCTCTT 58.745 33.333 0.00 0.00 0.00 2.85
2658 2861 8.540492 GTGTATATTGTGTCGGTTTATCTCTTG 58.460 37.037 0.00 0.00 0.00 3.02
2659 2862 8.255206 TGTATATTGTGTCGGTTTATCTCTTGT 58.745 33.333 0.00 0.00 0.00 3.16
2660 2863 7.772332 ATATTGTGTCGGTTTATCTCTTGTC 57.228 36.000 0.00 0.00 0.00 3.18
2661 2864 4.866508 TGTGTCGGTTTATCTCTTGTCT 57.133 40.909 0.00 0.00 0.00 3.41
2662 2865 4.556233 TGTGTCGGTTTATCTCTTGTCTG 58.444 43.478 0.00 0.00 0.00 3.51
2664 2867 3.576982 TGTCGGTTTATCTCTTGTCTGGT 59.423 43.478 0.00 0.00 0.00 4.00
2696 2908 0.321210 TCGCGGTTGTGATGTCCAAT 60.321 50.000 6.13 0.00 0.00 3.16
2701 2913 3.367292 GCGGTTGTGATGTCCAATTTGAT 60.367 43.478 0.00 0.00 0.00 2.57
2702 2914 4.414852 CGGTTGTGATGTCCAATTTGATC 58.585 43.478 0.00 0.00 0.00 2.92
2718 2930 1.798223 TGATCTTTTTCTGGCACGTCG 59.202 47.619 0.00 0.00 0.00 5.12
2728 2940 4.178861 GCACGTCGCCACTGAATA 57.821 55.556 0.00 0.00 32.94 1.75
2729 2941 1.708027 GCACGTCGCCACTGAATAC 59.292 57.895 0.00 0.00 32.94 1.89
2730 2942 0.736325 GCACGTCGCCACTGAATACT 60.736 55.000 0.00 0.00 32.94 2.12
2732 2944 0.885879 ACGTCGCCACTGAATACTGA 59.114 50.000 0.00 0.00 0.00 3.41
2733 2945 1.476891 ACGTCGCCACTGAATACTGAT 59.523 47.619 0.00 0.00 0.00 2.90
2734 2946 1.854743 CGTCGCCACTGAATACTGATG 59.145 52.381 0.00 0.00 0.00 3.07
2735 2947 1.594862 GTCGCCACTGAATACTGATGC 59.405 52.381 0.00 0.00 0.00 3.91
2736 2948 1.482182 TCGCCACTGAATACTGATGCT 59.518 47.619 0.00 0.00 0.00 3.79
2737 2949 1.863454 CGCCACTGAATACTGATGCTC 59.137 52.381 0.00 0.00 0.00 4.26
2738 2950 2.739609 CGCCACTGAATACTGATGCTCA 60.740 50.000 0.00 0.00 0.00 4.26
2739 2951 2.611292 GCCACTGAATACTGATGCTCAC 59.389 50.000 0.00 0.00 0.00 3.51
2740 2952 2.862536 CCACTGAATACTGATGCTCACG 59.137 50.000 0.00 0.00 0.00 4.35
2741 2953 3.515630 CACTGAATACTGATGCTCACGT 58.484 45.455 0.00 0.00 0.00 4.49
2742 2954 3.928992 CACTGAATACTGATGCTCACGTT 59.071 43.478 0.00 0.00 0.00 3.99
2743 2955 4.389992 CACTGAATACTGATGCTCACGTTT 59.610 41.667 0.00 0.00 0.00 3.60
2744 2956 4.389992 ACTGAATACTGATGCTCACGTTTG 59.610 41.667 0.00 0.00 0.00 2.93
2745 2957 3.125146 TGAATACTGATGCTCACGTTTGC 59.875 43.478 2.88 2.88 0.00 3.68
2746 2958 1.067693 TACTGATGCTCACGTTTGCG 58.932 50.000 5.27 0.00 44.93 4.85
2747 2959 1.510623 CTGATGCTCACGTTTGCGC 60.511 57.895 0.00 0.00 42.83 6.09
2748 2960 1.904852 CTGATGCTCACGTTTGCGCT 61.905 55.000 9.73 0.00 42.83 5.92
2749 2961 1.510623 GATGCTCACGTTTGCGCTG 60.511 57.895 9.73 0.00 42.83 5.18
2750 2962 1.900585 GATGCTCACGTTTGCGCTGA 61.901 55.000 9.73 1.93 42.83 4.26
2751 2963 2.127609 GCTCACGTTTGCGCTGAC 60.128 61.111 9.73 6.29 42.83 3.51
2752 2964 2.168621 CTCACGTTTGCGCTGACG 59.831 61.111 26.38 26.38 44.34 4.35
2756 2968 4.000557 CGTTTGCGCTGACGTGCT 62.001 61.111 22.08 0.00 46.58 4.40
2757 2969 2.127609 GTTTGCGCTGACGTGCTC 60.128 61.111 9.73 0.00 46.58 4.26
2771 2983 4.807039 GCTCGTTTAGCCGCCGGA 62.807 66.667 7.68 0.00 46.25 5.14
2775 2987 0.528249 TCGTTTAGCCGCCGGATTAC 60.528 55.000 7.68 1.15 0.00 1.89
2777 2989 1.884004 TTTAGCCGCCGGATTACGC 60.884 57.895 7.68 0.00 42.52 4.42
2783 2995 2.812499 GCCGGATTACGCCTGAGA 59.188 61.111 5.05 0.00 42.52 3.27
2798 3010 2.746362 CCTGAGATTTTGACTGGACTGC 59.254 50.000 0.00 0.00 0.00 4.40
2822 3034 6.512415 GCACTTTATCCGATTCTTCCAATCTG 60.512 42.308 0.00 0.00 0.00 2.90
2829 3041 3.429547 CGATTCTTCCAATCTGACCTCGT 60.430 47.826 0.00 0.00 0.00 4.18
2830 3042 4.508662 GATTCTTCCAATCTGACCTCGTT 58.491 43.478 0.00 0.00 0.00 3.85
2860 3073 4.557205 CAGGATTTCTACCGTGCTATACC 58.443 47.826 0.00 0.00 0.00 2.73
2861 3074 4.038763 CAGGATTTCTACCGTGCTATACCA 59.961 45.833 0.00 0.00 0.00 3.25
2863 3076 5.047235 AGGATTTCTACCGTGCTATACCATC 60.047 44.000 0.00 0.00 0.00 3.51
2864 3077 5.279306 GGATTTCTACCGTGCTATACCATCA 60.279 44.000 0.00 0.00 0.00 3.07
2865 3078 5.801531 TTTCTACCGTGCTATACCATCAT 57.198 39.130 0.00 0.00 0.00 2.45
2866 3079 5.386958 TTCTACCGTGCTATACCATCATC 57.613 43.478 0.00 0.00 0.00 2.92
2887 3106 4.374399 TCAAAGGACGTTGTAGGTCTTTC 58.626 43.478 0.00 0.00 32.38 2.62
2892 3111 4.458642 AGGACGTTGTAGGTCTTTCTCTAC 59.541 45.833 0.00 0.00 37.09 2.59
2902 3121 5.536260 AGGTCTTTCTCTACCGTTTTACAC 58.464 41.667 0.00 0.00 40.88 2.90
2904 3123 5.632764 GGTCTTTCTCTACCGTTTTACACTC 59.367 44.000 0.00 0.00 0.00 3.51
2916 3135 6.019152 CCGTTTTACACTCGGTGATATTTTG 58.981 40.000 10.46 0.00 39.51 2.44
2947 3166 2.222007 TGTTTGCCTGCAATCAACAC 57.778 45.000 11.98 5.21 34.09 3.32
2948 3167 1.755959 TGTTTGCCTGCAATCAACACT 59.244 42.857 11.98 0.00 34.09 3.55
2949 3168 2.168106 TGTTTGCCTGCAATCAACACTT 59.832 40.909 11.98 0.00 34.09 3.16
2950 3169 2.512485 TTGCCTGCAATCAACACTTG 57.488 45.000 0.00 0.00 0.00 3.16
2951 3170 1.689984 TGCCTGCAATCAACACTTGA 58.310 45.000 0.00 0.00 45.01 3.02
2952 3171 1.337703 TGCCTGCAATCAACACTTGAC 59.662 47.619 0.00 0.00 43.48 3.18
2954 3173 1.955778 CCTGCAATCAACACTTGACCA 59.044 47.619 0.00 0.00 43.48 4.02
2955 3174 2.030540 CCTGCAATCAACACTTGACCAG 60.031 50.000 0.00 0.00 43.48 4.00
2956 3175 1.955778 TGCAATCAACACTTGACCAGG 59.044 47.619 0.00 0.00 43.48 4.45
2957 3176 1.270550 GCAATCAACACTTGACCAGGG 59.729 52.381 0.00 0.00 43.48 4.45
2963 3182 1.762708 ACACTTGACCAGGGTTTGTG 58.237 50.000 13.80 13.80 34.25 3.33
2965 3184 0.923358 ACTTGACCAGGGTTTGTGGA 59.077 50.000 0.00 0.00 38.57 4.02
2967 3186 1.681264 CTTGACCAGGGTTTGTGGAAC 59.319 52.381 0.00 0.00 38.57 3.62
2976 3195 2.223537 GTTTGTGGAACCTGCTTTGG 57.776 50.000 0.00 0.00 34.36 3.28
2977 3196 1.754226 GTTTGTGGAACCTGCTTTGGA 59.246 47.619 0.00 0.00 34.36 3.53
2978 3197 1.691196 TTGTGGAACCTGCTTTGGAG 58.309 50.000 0.00 0.00 34.36 3.86
2979 3198 0.178992 TGTGGAACCTGCTTTGGAGG 60.179 55.000 3.56 3.56 34.36 4.30
2981 3200 1.075601 TGGAACCTGCTTTGGAGGAT 58.924 50.000 11.97 0.00 34.37 3.24
2982 3201 1.428912 TGGAACCTGCTTTGGAGGATT 59.571 47.619 11.97 2.99 34.37 3.01
2983 3202 1.821136 GGAACCTGCTTTGGAGGATTG 59.179 52.381 11.97 0.00 34.37 2.67
2984 3203 1.203287 GAACCTGCTTTGGAGGATTGC 59.797 52.381 11.97 0.00 34.37 3.56
2986 3205 1.203100 ACCTGCTTTGGAGGATTGCTT 60.203 47.619 11.97 0.00 34.37 3.91
2987 3206 1.897802 CCTGCTTTGGAGGATTGCTTT 59.102 47.619 0.00 0.00 31.48 3.51
2988 3207 2.094338 CCTGCTTTGGAGGATTGCTTTC 60.094 50.000 0.00 0.00 31.48 2.62
2989 3208 1.541147 TGCTTTGGAGGATTGCTTTCG 59.459 47.619 0.00 0.00 0.00 3.46
2990 3209 1.541588 GCTTTGGAGGATTGCTTTCGT 59.458 47.619 0.00 0.00 0.00 3.85
2991 3210 2.029918 GCTTTGGAGGATTGCTTTCGTT 60.030 45.455 0.00 0.00 0.00 3.85
2992 3211 3.552890 GCTTTGGAGGATTGCTTTCGTTT 60.553 43.478 0.00 0.00 0.00 3.60
2993 3212 3.915437 TTGGAGGATTGCTTTCGTTTC 57.085 42.857 0.00 0.00 0.00 2.78
2994 3213 2.857483 TGGAGGATTGCTTTCGTTTCA 58.143 42.857 0.00 0.00 0.00 2.69
2995 3214 3.218453 TGGAGGATTGCTTTCGTTTCAA 58.782 40.909 0.00 0.00 0.00 2.69
2996 3215 3.004315 TGGAGGATTGCTTTCGTTTCAAC 59.996 43.478 0.00 0.00 0.00 3.18
3008 3227 3.017442 TCGTTTCAACACAATCCAACCA 58.983 40.909 0.00 0.00 0.00 3.67
3046 3265 2.802816 AGAGTGCAGTGATTGTTTCGTC 59.197 45.455 0.00 0.00 0.00 4.20
3054 3273 2.066262 TGATTGTTTCGTCGAAGCCTC 58.934 47.619 17.64 14.37 0.00 4.70
3055 3274 2.066262 GATTGTTTCGTCGAAGCCTCA 58.934 47.619 17.64 9.06 0.00 3.86
3056 3275 1.214367 TTGTTTCGTCGAAGCCTCAC 58.786 50.000 17.64 9.17 0.00 3.51
3057 3276 0.937699 TGTTTCGTCGAAGCCTCACG 60.938 55.000 17.64 0.00 34.78 4.35
3079 3326 3.054878 CTGTTTTCCATGAGCAAAGTGC 58.945 45.455 0.00 0.00 45.46 4.40
3094 3351 0.955919 AGTGCCGAGGCTAAGCAAAC 60.956 55.000 15.75 3.15 42.51 2.93
3095 3352 1.072332 TGCCGAGGCTAAGCAAACA 59.928 52.632 15.75 0.00 42.51 2.83
3097 3354 0.596082 GCCGAGGCTAAGCAAACAAA 59.404 50.000 6.90 0.00 38.26 2.83
3098 3355 1.401539 GCCGAGGCTAAGCAAACAAAG 60.402 52.381 6.90 0.00 38.26 2.77
3099 3356 1.401539 CCGAGGCTAAGCAAACAAAGC 60.402 52.381 0.00 0.00 0.00 3.51
3100 3357 1.266718 CGAGGCTAAGCAAACAAAGCA 59.733 47.619 0.00 0.00 36.68 3.91
3101 3358 2.666026 GAGGCTAAGCAAACAAAGCAC 58.334 47.619 0.00 0.00 36.68 4.40
3146 3403 5.468072 TCGACGTGTAATCCCTCTTATCTAC 59.532 44.000 0.00 0.00 0.00 2.59
3147 3404 5.469421 CGACGTGTAATCCCTCTTATCTACT 59.531 44.000 0.00 0.00 0.00 2.57
3148 3405 6.347563 CGACGTGTAATCCCTCTTATCTACTC 60.348 46.154 0.00 0.00 0.00 2.59
3149 3406 5.769162 ACGTGTAATCCCTCTTATCTACTCC 59.231 44.000 0.00 0.00 0.00 3.85
3150 3407 5.183522 CGTGTAATCCCTCTTATCTACTCCC 59.816 48.000 0.00 0.00 0.00 4.30
3151 3408 6.316513 GTGTAATCCCTCTTATCTACTCCCT 58.683 44.000 0.00 0.00 0.00 4.20
3152 3409 6.434965 GTGTAATCCCTCTTATCTACTCCCTC 59.565 46.154 0.00 0.00 0.00 4.30
3153 3410 4.685513 ATCCCTCTTATCTACTCCCTCC 57.314 50.000 0.00 0.00 0.00 4.30
3154 3411 2.375845 TCCCTCTTATCTACTCCCTCCG 59.624 54.545 0.00 0.00 0.00 4.63
3155 3412 2.108601 CCCTCTTATCTACTCCCTCCGT 59.891 54.545 0.00 0.00 0.00 4.69
3156 3413 3.436761 CCCTCTTATCTACTCCCTCCGTT 60.437 52.174 0.00 0.00 0.00 4.44
3157 3414 3.822167 CCTCTTATCTACTCCCTCCGTTC 59.178 52.174 0.00 0.00 0.00 3.95
3158 3415 3.822167 CTCTTATCTACTCCCTCCGTTCC 59.178 52.174 0.00 0.00 0.00 3.62
3159 3416 3.462579 TCTTATCTACTCCCTCCGTTCCT 59.537 47.826 0.00 0.00 0.00 3.36
3160 3417 4.662179 TCTTATCTACTCCCTCCGTTCCTA 59.338 45.833 0.00 0.00 0.00 2.94
3161 3418 3.967467 ATCTACTCCCTCCGTTCCTAA 57.033 47.619 0.00 0.00 0.00 2.69
3162 3419 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
3163 3420 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
3164 3421 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
3165 3422 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
3166 3423 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
3167 3424 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
3168 3425 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3169 3426 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3170 3427 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3171 3428 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3172 3429 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3173 3430 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3174 3431 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
3175 3432 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
3178 3435 9.257651 CCGTTCCTAAATATAAGTCTTTGTAGG 57.742 37.037 0.00 0.00 0.00 3.18
3179 3436 9.257651 CGTTCCTAAATATAAGTCTTTGTAGGG 57.742 37.037 0.00 0.00 0.00 3.53
3192 3449 9.892130 AAGTCTTTGTAGGGATTTTACTAGATG 57.108 33.333 0.00 0.00 0.00 2.90
3193 3450 8.487028 AGTCTTTGTAGGGATTTTACTAGATGG 58.513 37.037 0.00 0.00 0.00 3.51
3194 3451 8.265764 GTCTTTGTAGGGATTTTACTAGATGGT 58.734 37.037 0.00 0.00 0.00 3.55
3195 3452 9.496710 TCTTTGTAGGGATTTTACTAGATGGTA 57.503 33.333 0.00 0.00 0.00 3.25
3196 3453 9.543783 CTTTGTAGGGATTTTACTAGATGGTAC 57.456 37.037 0.00 0.00 0.00 3.34
3215 3472 7.022055 TGGTACATACGGAGCAAAATTAATG 57.978 36.000 0.00 0.00 0.00 1.90
3216 3473 6.824196 TGGTACATACGGAGCAAAATTAATGA 59.176 34.615 0.00 0.00 0.00 2.57
3217 3474 7.337184 TGGTACATACGGAGCAAAATTAATGAA 59.663 33.333 0.00 0.00 0.00 2.57
3218 3475 8.349983 GGTACATACGGAGCAAAATTAATGAAT 58.650 33.333 0.00 0.00 0.00 2.57
3219 3476 9.169468 GTACATACGGAGCAAAATTAATGAATG 57.831 33.333 0.00 0.00 0.00 2.67
3220 3477 7.771183 ACATACGGAGCAAAATTAATGAATGT 58.229 30.769 0.00 0.00 0.00 2.71
3221 3478 8.898761 ACATACGGAGCAAAATTAATGAATGTA 58.101 29.630 0.00 0.00 0.00 2.29
3222 3479 9.169468 CATACGGAGCAAAATTAATGAATGTAC 57.831 33.333 0.00 0.00 0.00 2.90
3223 3480 7.151999 ACGGAGCAAAATTAATGAATGTACA 57.848 32.000 0.00 0.00 0.00 2.90
3224 3481 7.027161 ACGGAGCAAAATTAATGAATGTACAC 58.973 34.615 0.00 0.00 0.00 2.90
3225 3482 7.094377 ACGGAGCAAAATTAATGAATGTACACT 60.094 33.333 0.00 0.00 0.00 3.55
3226 3483 7.754924 CGGAGCAAAATTAATGAATGTACACTT 59.245 33.333 0.00 0.00 0.00 3.16
3249 3506 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
3254 3511 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
3255 3512 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
3256 3513 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
3257 3514 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
3258 3515 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
3259 3516 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
3260 3517 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
3261 3518 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
3262 3519 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
3263 3520 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
3264 3521 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
3265 3522 4.404394 ACATCCGTATGTGGTTCATAGTGA 59.596 41.667 0.00 0.00 44.79 3.41
3266 3523 5.105106 ACATCCGTATGTGGTTCATAGTGAA 60.105 40.000 0.00 0.00 44.79 3.18
3267 3524 5.408880 TCCGTATGTGGTTCATAGTGAAA 57.591 39.130 0.00 0.00 38.22 2.69
3268 3525 5.984725 TCCGTATGTGGTTCATAGTGAAAT 58.015 37.500 0.00 0.00 38.22 2.17
3269 3526 6.411376 TCCGTATGTGGTTCATAGTGAAATT 58.589 36.000 0.00 0.00 38.22 1.82
3270 3527 6.882140 TCCGTATGTGGTTCATAGTGAAATTT 59.118 34.615 0.00 0.00 38.22 1.82
3271 3528 7.065324 TCCGTATGTGGTTCATAGTGAAATTTC 59.935 37.037 11.41 11.41 38.22 2.17
3272 3529 7.065803 CCGTATGTGGTTCATAGTGAAATTTCT 59.934 37.037 18.64 2.61 38.22 2.52
3273 3530 9.093970 CGTATGTGGTTCATAGTGAAATTTCTA 57.906 33.333 18.64 4.82 38.22 2.10
3275 3532 8.862325 ATGTGGTTCATAGTGAAATTTCTACA 57.138 30.769 18.64 4.82 38.22 2.74
3276 3533 8.684386 TGTGGTTCATAGTGAAATTTCTACAA 57.316 30.769 18.64 3.14 38.22 2.41
3277 3534 9.126151 TGTGGTTCATAGTGAAATTTCTACAAA 57.874 29.630 18.64 8.40 38.22 2.83
3278 3535 9.612620 GTGGTTCATAGTGAAATTTCTACAAAG 57.387 33.333 18.64 5.49 38.22 2.77
3279 3536 9.567776 TGGTTCATAGTGAAATTTCTACAAAGA 57.432 29.630 18.64 7.52 38.22 2.52
3280 3537 9.827411 GGTTCATAGTGAAATTTCTACAAAGAC 57.173 33.333 18.64 7.04 38.22 3.01
3298 3555 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
3299 3556 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
3300 3557 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3301 3558 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3302 3559 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3303 3560 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
3304 3561 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
3310 3567 2.246849 AGGAACGGAGGGAGTATTACCT 59.753 50.000 0.00 0.00 40.54 3.08
3321 3578 5.486775 AGGGAGTATTACCTGATGATGATGG 59.513 44.000 0.00 0.00 35.30 3.51
3356 3613 5.662456 AGATTCTCACACTGATGATGACAG 58.338 41.667 0.00 0.00 40.68 3.51
3414 3671 2.649129 GCAATGAAGGCACCCACCC 61.649 63.158 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 4.154918 CCCTGAGACATCTTGCTGTTAAAC 59.845 45.833 0.00 0.00 0.00 2.01
111 112 4.136796 TGCAGCACTTTTAAGATGACACT 58.863 39.130 0.00 0.00 0.00 3.55
178 179 9.574516 TCTCTTAGTTAAAAGAAGGCAAATCTT 57.425 29.630 0.00 0.00 38.75 2.40
180 181 9.780413 CATCTCTTAGTTAAAAGAAGGCAAATC 57.220 33.333 0.00 0.00 35.14 2.17
181 182 8.743714 CCATCTCTTAGTTAAAAGAAGGCAAAT 58.256 33.333 0.00 0.00 35.14 2.32
182 183 7.724061 ACCATCTCTTAGTTAAAAGAAGGCAAA 59.276 33.333 0.00 0.00 35.14 3.68
339 419 6.647895 GGTGATTGAATTTTTGTGAGCAGATT 59.352 34.615 0.00 0.00 0.00 2.40
349 430 6.979817 TGTCAAGTCTGGTGATTGAATTTTTG 59.020 34.615 0.00 0.00 34.91 2.44
360 441 2.224523 GGACCAATGTCAAGTCTGGTGA 60.225 50.000 0.00 0.00 42.27 4.02
391 472 8.279103 CACCGAGAAATCTGAAATAAATCTAGC 58.721 37.037 0.00 0.00 0.00 3.42
409 490 3.556213 CCCTAAACACACATCACCGAGAA 60.556 47.826 0.00 0.00 0.00 2.87
411 492 2.346803 CCCTAAACACACATCACCGAG 58.653 52.381 0.00 0.00 0.00 4.63
416 497 1.633432 CCTCCCCCTAAACACACATCA 59.367 52.381 0.00 0.00 0.00 3.07
429 510 1.192803 ACAGAAACGTCTCCTCCCCC 61.193 60.000 0.00 0.00 28.78 5.40
430 511 0.246910 GACAGAAACGTCTCCTCCCC 59.753 60.000 0.00 0.00 32.92 4.81
445 526 2.805353 CGCCTTCGTGGTCGACAG 60.805 66.667 18.91 8.22 46.03 3.51
446 527 3.289062 TCGCCTTCGTGGTCGACA 61.289 61.111 18.91 0.27 46.03 4.35
460 541 1.403972 GATGAAGTCGTGACGGTCGC 61.404 60.000 11.58 11.58 36.20 5.19
1055 1156 4.886121 GACGGGAATCGACGGGGC 62.886 72.222 0.00 0.00 42.43 5.80
1077 1181 0.179100 AGAGAATCGATGTGCACGGG 60.179 55.000 13.13 3.71 42.67 5.28
1084 1188 3.786635 CGAAGGGAAAGAGAATCGATGT 58.213 45.455 0.00 0.00 42.67 3.06
1103 1212 0.179040 AAAGGAAAGGAACACCGCGA 60.179 50.000 8.23 0.00 0.00 5.87
1121 1230 4.309099 GCCAAGATTCATCAGCACAAAAA 58.691 39.130 0.00 0.00 0.00 1.94
1126 1235 1.404391 CAGGCCAAGATTCATCAGCAC 59.596 52.381 5.01 0.00 0.00 4.40
1127 1236 1.005097 ACAGGCCAAGATTCATCAGCA 59.995 47.619 5.01 0.00 0.00 4.41
1128 1237 1.404391 CACAGGCCAAGATTCATCAGC 59.596 52.381 5.01 0.00 0.00 4.26
1129 1238 2.995283 TCACAGGCCAAGATTCATCAG 58.005 47.619 5.01 0.00 0.00 2.90
1132 1241 4.246712 AGATTCACAGGCCAAGATTCAT 57.753 40.909 5.01 0.00 0.00 2.57
1422 1532 2.282462 CCCTCCAAACAAGCCGCT 60.282 61.111 0.00 0.00 0.00 5.52
1455 1565 3.474570 GGCAGATCTGACCCGGCT 61.475 66.667 27.04 0.00 30.68 5.52
1578 1691 3.133721 ACTGCTCTCTCTCTCTCTCTCTC 59.866 52.174 0.00 0.00 0.00 3.20
1579 1692 3.110705 ACTGCTCTCTCTCTCTCTCTCT 58.889 50.000 0.00 0.00 0.00 3.10
1580 1693 3.462021 GACTGCTCTCTCTCTCTCTCTC 58.538 54.545 0.00 0.00 0.00 3.20
1581 1694 2.159043 CGACTGCTCTCTCTCTCTCTCT 60.159 54.545 0.00 0.00 0.00 3.10
1639 1753 3.560278 CGCGGGGAATACGTGTGC 61.560 66.667 0.00 0.00 37.10 4.57
1726 1840 5.237344 GCTACACAACAGATGACTTTGACTT 59.763 40.000 0.00 0.00 0.00 3.01
1832 1986 6.609237 TTTTCTGATCTTATCTCAATGCCG 57.391 37.500 0.00 0.00 0.00 5.69
1911 2071 2.440247 CCCGATTCCCAGGTTGCC 60.440 66.667 0.00 0.00 0.00 4.52
1998 2161 7.242914 ACGTAATTAGTACTGCAATAAAGCC 57.757 36.000 5.39 0.00 0.00 4.35
2046 2209 8.810652 TGCAATTTTCAACTGTTTTAGGATAC 57.189 30.769 0.00 0.00 0.00 2.24
2049 2212 7.495901 TCATGCAATTTTCAACTGTTTTAGGA 58.504 30.769 0.00 0.00 0.00 2.94
2052 2223 8.939201 TCTTCATGCAATTTTCAACTGTTTTA 57.061 26.923 0.00 0.00 0.00 1.52
2063 2234 3.256631 AGAGCCGTTCTTCATGCAATTTT 59.743 39.130 0.00 0.00 29.61 1.82
2097 2268 7.722416 ATCTGATCGAGAATCTCCGGTGAGA 62.722 48.000 12.42 3.65 41.34 3.27
2098 2269 1.950216 TGATCGAGAATCTCCGGTGAG 59.050 52.381 12.42 0.00 40.17 3.51
2099 2270 1.950216 CTGATCGAGAATCTCCGGTGA 59.050 52.381 8.96 8.96 35.24 4.02
2311 2501 1.141858 AGGCAGGATAAAGTAGCTGGC 59.858 52.381 0.00 0.00 37.60 4.85
2312 2502 3.209410 CAAGGCAGGATAAAGTAGCTGG 58.791 50.000 0.00 0.00 0.00 4.85
2313 2503 3.118261 TCCAAGGCAGGATAAAGTAGCTG 60.118 47.826 0.00 0.00 31.23 4.24
2314 2504 3.115390 TCCAAGGCAGGATAAAGTAGCT 58.885 45.455 0.00 0.00 31.23 3.32
2315 2505 3.560636 TCCAAGGCAGGATAAAGTAGC 57.439 47.619 0.00 0.00 31.23 3.58
2316 2506 5.041191 ACATCCAAGGCAGGATAAAGTAG 57.959 43.478 10.64 1.81 46.54 2.57
2317 2507 5.191722 AGAACATCCAAGGCAGGATAAAGTA 59.808 40.000 10.64 0.00 46.54 2.24
2318 2508 4.018050 AGAACATCCAAGGCAGGATAAAGT 60.018 41.667 10.64 3.58 46.54 2.66
2360 2550 3.098636 GGCTGTCGCGAACAAAAATATC 58.901 45.455 12.06 0.00 37.45 1.63
2361 2551 2.747446 AGGCTGTCGCGAACAAAAATAT 59.253 40.909 12.06 0.00 37.45 1.28
2362 2552 2.095969 CAGGCTGTCGCGAACAAAAATA 60.096 45.455 12.06 0.00 37.45 1.40
2363 2553 0.951558 AGGCTGTCGCGAACAAAAAT 59.048 45.000 12.06 0.00 37.45 1.82
2364 2554 0.028770 CAGGCTGTCGCGAACAAAAA 59.971 50.000 12.06 0.00 37.45 1.94
2511 2707 6.475727 CGATAATGCCCGACGAGAAATAATAT 59.524 38.462 0.00 0.00 0.00 1.28
2540 2736 6.839124 TCATAAACATGGATCAAGCAAAGT 57.161 33.333 0.00 0.00 0.00 2.66
2546 2742 7.012138 CAGAGAGGTTCATAAACATGGATCAAG 59.988 40.741 0.00 0.00 37.10 3.02
2657 2860 3.476552 GAGTTGAATTCCACACCAGACA 58.523 45.455 11.85 0.00 0.00 3.41
2658 2861 2.480419 CGAGTTGAATTCCACACCAGAC 59.520 50.000 11.85 0.00 0.00 3.51
2659 2862 2.766313 CGAGTTGAATTCCACACCAGA 58.234 47.619 11.85 0.00 0.00 3.86
2660 2863 1.197721 GCGAGTTGAATTCCACACCAG 59.802 52.381 11.85 2.00 0.00 4.00
2661 2864 1.234821 GCGAGTTGAATTCCACACCA 58.765 50.000 11.85 0.00 0.00 4.17
2662 2865 0.165944 CGCGAGTTGAATTCCACACC 59.834 55.000 11.85 2.97 0.00 4.16
2664 2867 0.250124 ACCGCGAGTTGAATTCCACA 60.250 50.000 8.23 0.00 0.00 4.17
2688 2900 6.168389 GCCAGAAAAAGATCAAATTGGACAT 58.832 36.000 0.00 0.00 0.00 3.06
2696 2908 3.303725 CGACGTGCCAGAAAAAGATCAAA 60.304 43.478 0.00 0.00 0.00 2.69
2701 2913 1.938861 GCGACGTGCCAGAAAAAGA 59.061 52.632 0.00 0.00 37.76 2.52
2702 2914 4.515107 GCGACGTGCCAGAAAAAG 57.485 55.556 0.00 0.00 37.76 2.27
2718 2930 2.910199 TGAGCATCAGTATTCAGTGGC 58.090 47.619 0.00 0.00 42.56 5.01
2735 2947 2.168621 CGTCAGCGCAAACGTGAG 59.831 61.111 21.80 3.39 42.83 3.51
2739 2951 3.893914 GAGCACGTCAGCGCAAACG 62.894 63.158 26.36 26.36 44.22 3.60
2740 2952 2.127609 GAGCACGTCAGCGCAAAC 60.128 61.111 11.47 6.09 42.83 2.93
2741 2953 3.701530 CGAGCACGTCAGCGCAAA 61.702 61.111 11.47 0.00 42.83 3.68
2755 2967 0.249155 TAATCCGGCGGCTAAACGAG 60.249 55.000 23.83 0.00 35.47 4.18
2756 2968 0.528249 GTAATCCGGCGGCTAAACGA 60.528 55.000 23.83 1.37 35.47 3.85
2757 2969 1.814211 CGTAATCCGGCGGCTAAACG 61.814 60.000 23.83 22.41 0.00 3.60
2767 2979 2.240493 AAATCTCAGGCGTAATCCGG 57.760 50.000 0.00 0.00 36.94 5.14
2771 2983 3.941483 CCAGTCAAAATCTCAGGCGTAAT 59.059 43.478 0.00 0.00 0.00 1.89
2775 2987 1.734465 GTCCAGTCAAAATCTCAGGCG 59.266 52.381 0.00 0.00 0.00 5.52
2777 2989 2.746362 GCAGTCCAGTCAAAATCTCAGG 59.254 50.000 0.00 0.00 0.00 3.86
2783 2995 5.183904 GGATAAAGTGCAGTCCAGTCAAAAT 59.816 40.000 0.00 0.00 0.00 1.82
2798 3010 6.763135 TCAGATTGGAAGAATCGGATAAAGTG 59.237 38.462 0.00 0.00 0.00 3.16
2829 3041 0.908910 TAGAAATCCTGCGGCCTCAA 59.091 50.000 0.00 0.00 0.00 3.02
2830 3042 0.178068 GTAGAAATCCTGCGGCCTCA 59.822 55.000 0.00 0.00 0.00 3.86
2834 3046 1.153429 ACGGTAGAAATCCTGCGGC 60.153 57.895 0.00 0.00 32.49 6.53
2845 3058 4.403734 TGATGATGGTATAGCACGGTAGA 58.596 43.478 6.80 0.00 0.00 2.59
2846 3059 4.783764 TGATGATGGTATAGCACGGTAG 57.216 45.455 6.80 0.00 0.00 3.18
2848 3061 4.380531 CTTTGATGATGGTATAGCACGGT 58.619 43.478 6.80 0.00 0.00 4.83
2860 3073 4.253685 ACCTACAACGTCCTTTGATGATG 58.746 43.478 0.00 0.00 36.61 3.07
2861 3074 4.223032 AGACCTACAACGTCCTTTGATGAT 59.777 41.667 0.00 0.00 0.00 2.45
2863 3076 3.926616 AGACCTACAACGTCCTTTGATG 58.073 45.455 0.00 0.00 0.00 3.07
2864 3077 4.618920 AAGACCTACAACGTCCTTTGAT 57.381 40.909 0.00 0.00 0.00 2.57
2865 3078 4.100498 AGAAAGACCTACAACGTCCTTTGA 59.900 41.667 0.00 0.00 0.00 2.69
2866 3079 4.377897 AGAAAGACCTACAACGTCCTTTG 58.622 43.478 0.00 0.00 0.00 2.77
2902 3121 9.787532 AATCACAAAATACAAAATATCACCGAG 57.212 29.630 0.00 0.00 0.00 4.63
2904 3123 9.352784 ACAATCACAAAATACAAAATATCACCG 57.647 29.630 0.00 0.00 0.00 4.94
2911 3130 8.344098 CAGGCAAACAATCACAAAATACAAAAT 58.656 29.630 0.00 0.00 0.00 1.82
2912 3131 7.678218 GCAGGCAAACAATCACAAAATACAAAA 60.678 33.333 0.00 0.00 0.00 2.44
2916 3135 4.749099 TGCAGGCAAACAATCACAAAATAC 59.251 37.500 0.00 0.00 0.00 1.89
2944 3163 1.684869 CCACAAACCCTGGTCAAGTGT 60.685 52.381 12.02 3.33 0.00 3.55
2947 3166 1.681264 GTTCCACAAACCCTGGTCAAG 59.319 52.381 0.00 0.00 31.20 3.02
2948 3167 1.770294 GTTCCACAAACCCTGGTCAA 58.230 50.000 0.00 0.00 31.20 3.18
2949 3168 3.505835 GTTCCACAAACCCTGGTCA 57.494 52.632 0.00 0.00 31.20 4.02
2957 3176 1.754226 TCCAAAGCAGGTTCCACAAAC 59.246 47.619 0.00 0.00 37.12 2.93
2959 3178 1.691196 CTCCAAAGCAGGTTCCACAA 58.309 50.000 0.00 0.00 0.00 3.33
2960 3179 0.178992 CCTCCAAAGCAGGTTCCACA 60.179 55.000 0.00 0.00 0.00 4.17
2961 3180 0.110486 TCCTCCAAAGCAGGTTCCAC 59.890 55.000 0.00 0.00 32.20 4.02
2963 3182 1.821136 CAATCCTCCAAAGCAGGTTCC 59.179 52.381 0.00 0.00 32.20 3.62
2965 3184 1.203100 AGCAATCCTCCAAAGCAGGTT 60.203 47.619 0.00 0.00 32.20 3.50
2967 3186 1.553706 AAGCAATCCTCCAAAGCAGG 58.446 50.000 0.00 0.00 0.00 4.85
2968 3187 2.415090 CGAAAGCAATCCTCCAAAGCAG 60.415 50.000 0.00 0.00 0.00 4.24
2970 3189 1.541588 ACGAAAGCAATCCTCCAAAGC 59.458 47.619 0.00 0.00 0.00 3.51
2971 3190 3.923017 AACGAAAGCAATCCTCCAAAG 57.077 42.857 0.00 0.00 0.00 2.77
2973 3192 3.218453 TGAAACGAAAGCAATCCTCCAA 58.782 40.909 0.00 0.00 0.00 3.53
2974 3193 2.857483 TGAAACGAAAGCAATCCTCCA 58.143 42.857 0.00 0.00 0.00 3.86
2975 3194 3.004315 TGTTGAAACGAAAGCAATCCTCC 59.996 43.478 0.00 0.00 0.00 4.30
2976 3195 3.975035 GTGTTGAAACGAAAGCAATCCTC 59.025 43.478 0.00 0.00 0.00 3.71
2977 3196 3.380004 TGTGTTGAAACGAAAGCAATCCT 59.620 39.130 0.00 0.00 0.00 3.24
2978 3197 3.701241 TGTGTTGAAACGAAAGCAATCC 58.299 40.909 0.00 0.00 0.00 3.01
2979 3198 5.107875 GGATTGTGTTGAAACGAAAGCAATC 60.108 40.000 0.00 0.00 39.78 2.67
2981 3200 4.109050 GGATTGTGTTGAAACGAAAGCAA 58.891 39.130 0.00 0.00 0.00 3.91
2982 3201 3.129462 TGGATTGTGTTGAAACGAAAGCA 59.871 39.130 0.00 0.00 0.00 3.91
2983 3202 3.701241 TGGATTGTGTTGAAACGAAAGC 58.299 40.909 0.00 0.00 0.00 3.51
2984 3203 4.502645 GGTTGGATTGTGTTGAAACGAAAG 59.497 41.667 0.00 0.00 0.00 2.62
2986 3205 3.444034 TGGTTGGATTGTGTTGAAACGAA 59.556 39.130 0.00 0.00 0.00 3.85
2987 3206 3.017442 TGGTTGGATTGTGTTGAAACGA 58.983 40.909 0.00 0.00 0.00 3.85
2988 3207 3.428746 TGGTTGGATTGTGTTGAAACG 57.571 42.857 0.00 0.00 0.00 3.60
2989 3208 5.200368 AGATGGTTGGATTGTGTTGAAAC 57.800 39.130 0.00 0.00 0.00 2.78
2990 3209 5.867903 AAGATGGTTGGATTGTGTTGAAA 57.132 34.783 0.00 0.00 0.00 2.69
2991 3210 5.867903 AAAGATGGTTGGATTGTGTTGAA 57.132 34.783 0.00 0.00 0.00 2.69
2992 3211 6.071447 CCATAAAGATGGTTGGATTGTGTTGA 60.071 38.462 0.00 0.00 46.80 3.18
2993 3212 6.101332 CCATAAAGATGGTTGGATTGTGTTG 58.899 40.000 0.00 0.00 46.80 3.33
2994 3213 6.284891 CCATAAAGATGGTTGGATTGTGTT 57.715 37.500 0.00 0.00 46.80 3.32
2995 3214 5.920193 CCATAAAGATGGTTGGATTGTGT 57.080 39.130 0.00 0.00 46.80 3.72
3008 3227 8.322091 ACTGCACTCTTTACTTACCATAAAGAT 58.678 33.333 7.46 0.00 43.98 2.40
3054 3273 0.592637 TGCTCATGGAAAACAGCGTG 59.407 50.000 0.00 0.00 34.39 5.34
3055 3274 1.317613 TTGCTCATGGAAAACAGCGT 58.682 45.000 0.00 0.00 34.39 5.07
3056 3275 2.287788 ACTTTGCTCATGGAAAACAGCG 60.288 45.455 0.00 0.00 33.25 5.18
3057 3276 3.054878 CACTTTGCTCATGGAAAACAGC 58.945 45.455 0.00 0.00 33.25 4.40
3079 3326 1.401539 GCTTTGTTTGCTTAGCCTCGG 60.402 52.381 0.29 0.00 0.00 4.63
3094 3351 2.545526 CCTGTATAGATGGCGTGCTTTG 59.454 50.000 0.00 0.00 0.00 2.77
3095 3352 2.838736 CCTGTATAGATGGCGTGCTTT 58.161 47.619 0.00 0.00 0.00 3.51
3097 3354 0.034059 GCCTGTATAGATGGCGTGCT 59.966 55.000 0.00 0.00 37.11 4.40
3098 3355 2.533318 GCCTGTATAGATGGCGTGC 58.467 57.895 0.00 0.00 37.11 5.34
3146 3403 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3147 3404 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3148 3405 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3149 3406 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
3150 3407 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
3152 3409 9.257651 CCTACAAAGACTTATATTTAGGAACGG 57.742 37.037 0.00 0.00 0.00 4.44
3153 3410 9.257651 CCCTACAAAGACTTATATTTAGGAACG 57.742 37.037 0.00 0.00 0.00 3.95
3166 3423 9.892130 CATCTAGTAAAATCCCTACAAAGACTT 57.108 33.333 0.00 0.00 0.00 3.01
3167 3424 8.487028 CCATCTAGTAAAATCCCTACAAAGACT 58.513 37.037 0.00 0.00 0.00 3.24
3168 3425 8.265764 ACCATCTAGTAAAATCCCTACAAAGAC 58.734 37.037 0.00 0.00 0.00 3.01
3169 3426 8.388656 ACCATCTAGTAAAATCCCTACAAAGA 57.611 34.615 0.00 0.00 0.00 2.52
3170 3427 9.543783 GTACCATCTAGTAAAATCCCTACAAAG 57.456 37.037 0.00 0.00 0.00 2.77
3171 3428 9.049050 TGTACCATCTAGTAAAATCCCTACAAA 57.951 33.333 0.00 0.00 0.00 2.83
3172 3429 8.612486 TGTACCATCTAGTAAAATCCCTACAA 57.388 34.615 0.00 0.00 0.00 2.41
3173 3430 8.792830 ATGTACCATCTAGTAAAATCCCTACA 57.207 34.615 0.00 0.00 0.00 2.74
3175 3432 9.017509 CGTATGTACCATCTAGTAAAATCCCTA 57.982 37.037 0.00 0.00 0.00 3.53
3176 3433 7.039223 CCGTATGTACCATCTAGTAAAATCCCT 60.039 40.741 0.00 0.00 0.00 4.20
3177 3434 7.039504 TCCGTATGTACCATCTAGTAAAATCCC 60.040 40.741 0.00 0.00 0.00 3.85
3178 3435 7.889469 TCCGTATGTACCATCTAGTAAAATCC 58.111 38.462 0.00 0.00 0.00 3.01
3179 3436 7.541437 GCTCCGTATGTACCATCTAGTAAAATC 59.459 40.741 0.00 0.00 0.00 2.17
3180 3437 7.014905 TGCTCCGTATGTACCATCTAGTAAAAT 59.985 37.037 0.00 0.00 0.00 1.82
3181 3438 6.321945 TGCTCCGTATGTACCATCTAGTAAAA 59.678 38.462 0.00 0.00 0.00 1.52
3182 3439 5.829391 TGCTCCGTATGTACCATCTAGTAAA 59.171 40.000 0.00 0.00 0.00 2.01
3183 3440 5.379187 TGCTCCGTATGTACCATCTAGTAA 58.621 41.667 0.00 0.00 0.00 2.24
3184 3441 4.976864 TGCTCCGTATGTACCATCTAGTA 58.023 43.478 0.00 0.00 0.00 1.82
3185 3442 3.828921 TGCTCCGTATGTACCATCTAGT 58.171 45.455 0.00 0.00 0.00 2.57
3186 3443 4.848562 TTGCTCCGTATGTACCATCTAG 57.151 45.455 0.00 0.00 0.00 2.43
3187 3444 5.601583 TTTTGCTCCGTATGTACCATCTA 57.398 39.130 0.00 0.00 0.00 1.98
3188 3445 4.481368 TTTTGCTCCGTATGTACCATCT 57.519 40.909 0.00 0.00 0.00 2.90
3189 3446 5.751243 AATTTTGCTCCGTATGTACCATC 57.249 39.130 0.00 0.00 0.00 3.51
3190 3447 7.500892 TCATTAATTTTGCTCCGTATGTACCAT 59.499 33.333 0.00 0.00 0.00 3.55
3191 3448 6.824196 TCATTAATTTTGCTCCGTATGTACCA 59.176 34.615 0.00 0.00 0.00 3.25
3192 3449 7.254227 TCATTAATTTTGCTCCGTATGTACC 57.746 36.000 0.00 0.00 0.00 3.34
3193 3450 9.169468 CATTCATTAATTTTGCTCCGTATGTAC 57.831 33.333 0.00 0.00 0.00 2.90
3194 3451 8.898761 ACATTCATTAATTTTGCTCCGTATGTA 58.101 29.630 0.00 0.00 0.00 2.29
3195 3452 7.771183 ACATTCATTAATTTTGCTCCGTATGT 58.229 30.769 0.00 0.00 0.00 2.29
3196 3453 9.169468 GTACATTCATTAATTTTGCTCCGTATG 57.831 33.333 0.00 0.00 0.00 2.39
3197 3454 8.898761 TGTACATTCATTAATTTTGCTCCGTAT 58.101 29.630 0.00 0.00 0.00 3.06
3198 3455 8.178964 GTGTACATTCATTAATTTTGCTCCGTA 58.821 33.333 0.00 0.00 0.00 4.02
3199 3456 7.027161 GTGTACATTCATTAATTTTGCTCCGT 58.973 34.615 0.00 0.00 0.00 4.69
3200 3457 7.250569 AGTGTACATTCATTAATTTTGCTCCG 58.749 34.615 0.00 0.00 0.00 4.63
3201 3458 8.986477 AAGTGTACATTCATTAATTTTGCTCC 57.014 30.769 0.00 0.00 0.00 4.70
3223 3480 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
3227 3484 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
3228 3485 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
3229 3486 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
3230 3487 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
3231 3488 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
3232 3489 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
3233 3490 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
3234 3491 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
3235 3492 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
3236 3493 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
3237 3494 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
3238 3495 8.251026 CACTATGAACCACATACGGATGTATAT 58.749 37.037 14.23 1.68 44.82 0.86
3239 3496 7.449086 TCACTATGAACCACATACGGATGTATA 59.551 37.037 14.23 6.48 44.82 1.47
3240 3497 6.266786 TCACTATGAACCACATACGGATGTAT 59.733 38.462 14.23 5.54 44.82 2.29
3241 3498 5.595133 TCACTATGAACCACATACGGATGTA 59.405 40.000 14.23 0.00 44.82 2.29
3242 3499 5.105106 TTCACTATGAACCACATACGGATGT 60.105 40.000 7.68 7.68 37.89 3.06
3243 3500 4.944048 TCACTATGAACCACATACGGATG 58.056 43.478 5.94 5.94 40.07 3.51
3244 3501 5.607939 TTCACTATGAACCACATACGGAT 57.392 39.130 0.00 0.00 40.07 4.18
3245 3502 5.408880 TTTCACTATGAACCACATACGGA 57.591 39.130 0.00 0.00 35.89 4.69
3246 3503 6.677781 AATTTCACTATGAACCACATACGG 57.322 37.500 0.00 0.00 35.89 4.02
3247 3504 7.974675 AGAAATTTCACTATGAACCACATACG 58.025 34.615 19.99 0.00 35.89 3.06
3249 3506 9.952030 TGTAGAAATTTCACTATGAACCACATA 57.048 29.630 19.99 0.00 35.89 2.29
3250 3507 8.862325 TGTAGAAATTTCACTATGAACCACAT 57.138 30.769 19.99 0.00 35.89 3.21
3251 3508 8.684386 TTGTAGAAATTTCACTATGAACCACA 57.316 30.769 19.99 5.40 35.89 4.17
3252 3509 9.612620 CTTTGTAGAAATTTCACTATGAACCAC 57.387 33.333 19.99 3.25 35.89 4.16
3253 3510 9.567776 TCTTTGTAGAAATTTCACTATGAACCA 57.432 29.630 19.99 0.96 35.89 3.67
3254 3511 9.827411 GTCTTTGTAGAAATTTCACTATGAACC 57.173 33.333 19.99 6.84 31.84 3.62
3273 3530 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
3274 3531 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
3275 3532 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3276 3533 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3277 3534 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3278 3535 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3279 3536 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3280 3537 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3281 3538 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
3282 3539 9.247861 GTAATACTCCCTCCGTTCCTAAATATA 57.752 37.037 0.00 0.00 0.00 0.86
3283 3540 7.179872 GGTAATACTCCCTCCGTTCCTAAATAT 59.820 40.741 0.00 0.00 0.00 1.28
3284 3541 6.494835 GGTAATACTCCCTCCGTTCCTAAATA 59.505 42.308 0.00 0.00 0.00 1.40
3285 3542 5.306419 GGTAATACTCCCTCCGTTCCTAAAT 59.694 44.000 0.00 0.00 0.00 1.40
3286 3543 4.651045 GGTAATACTCCCTCCGTTCCTAAA 59.349 45.833 0.00 0.00 0.00 1.85
3287 3544 4.078980 AGGTAATACTCCCTCCGTTCCTAA 60.079 45.833 0.00 0.00 0.00 2.69
3288 3545 3.464833 AGGTAATACTCCCTCCGTTCCTA 59.535 47.826 0.00 0.00 0.00 2.94
3289 3546 2.246849 AGGTAATACTCCCTCCGTTCCT 59.753 50.000 0.00 0.00 0.00 3.36
3290 3547 2.364647 CAGGTAATACTCCCTCCGTTCC 59.635 54.545 0.00 0.00 0.00 3.62
3291 3548 3.294214 TCAGGTAATACTCCCTCCGTTC 58.706 50.000 0.00 0.00 0.00 3.95
3292 3549 3.393426 TCAGGTAATACTCCCTCCGTT 57.607 47.619 0.00 0.00 0.00 4.44
3293 3550 3.117246 TCATCAGGTAATACTCCCTCCGT 60.117 47.826 0.00 0.00 0.00 4.69
3294 3551 3.497332 TCATCAGGTAATACTCCCTCCG 58.503 50.000 0.00 0.00 0.00 4.63
3295 3552 5.087323 TCATCATCAGGTAATACTCCCTCC 58.913 45.833 0.00 0.00 0.00 4.30
3296 3553 6.351711 CCATCATCATCAGGTAATACTCCCTC 60.352 46.154 0.00 0.00 0.00 4.30
3297 3554 5.486775 CCATCATCATCAGGTAATACTCCCT 59.513 44.000 0.00 0.00 0.00 4.20
3298 3555 5.738909 CCATCATCATCAGGTAATACTCCC 58.261 45.833 0.00 0.00 0.00 4.30
3299 3556 5.181748 GCCATCATCATCAGGTAATACTCC 58.818 45.833 0.00 0.00 0.00 3.85
3300 3557 5.798132 TGCCATCATCATCAGGTAATACTC 58.202 41.667 0.00 0.00 0.00 2.59
3301 3558 5.830799 TGCCATCATCATCAGGTAATACT 57.169 39.130 0.00 0.00 0.00 2.12
3302 3559 7.458409 AAATGCCATCATCATCAGGTAATAC 57.542 36.000 0.00 0.00 31.27 1.89
3303 3560 7.506599 ACAAAATGCCATCATCATCAGGTAATA 59.493 33.333 0.00 0.00 31.27 0.98
3304 3561 6.325545 ACAAAATGCCATCATCATCAGGTAAT 59.674 34.615 0.00 0.00 31.27 1.89
3310 3567 7.838884 TCTAAAACAAAATGCCATCATCATCA 58.161 30.769 0.00 0.00 31.27 3.07
3321 3578 7.862372 TCAGTGTGAGAATCTAAAACAAAATGC 59.138 33.333 0.00 0.00 34.92 3.56
3356 3613 3.000925 CGATGTGGAATTAGGCAACGTAC 59.999 47.826 0.00 0.00 46.39 3.67
3396 3653 2.649129 GGGTGGGTGCCTTCATTGC 61.649 63.158 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.