Multiple sequence alignment - TraesCS2D01G193600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G193600 chr2D 100.000 4234 0 0 1 4234 138750738 138754971 0.000000e+00 7819
1 TraesCS2D01G193600 chr2D 91.686 421 23 2 2 411 440972733 440973152 1.320000e-159 573
2 TraesCS2D01G193600 chr2D 88.915 424 35 2 1 413 606400357 606399935 2.920000e-141 512
3 TraesCS2D01G193600 chr2B 93.283 3052 129 38 704 3704 197207852 197210878 0.000000e+00 4431
4 TraesCS2D01G193600 chr2B 95.604 546 17 2 3690 4234 197210895 197211434 0.000000e+00 869
5 TraesCS2D01G193600 chr2B 81.412 425 67 5 1 413 39984705 39984281 1.890000e-88 337
6 TraesCS2D01G193600 chr2B 97.727 44 0 1 587 629 22722354 22722397 1.630000e-09 75
7 TraesCS2D01G193600 chr2A 93.655 1970 77 16 2297 4234 162294374 162292421 0.000000e+00 2902
8 TraesCS2D01G193600 chr2A 97.066 1568 34 6 699 2262 162295933 162294374 0.000000e+00 2630
9 TraesCS2D01G193600 chr3D 93.632 424 15 2 1 413 584565659 584566081 1.290000e-174 623
10 TraesCS2D01G193600 chr3D 82.057 418 62 4 6 411 8547282 8546866 1.130000e-90 344
11 TraesCS2D01G193600 chr1D 88.416 423 37 2 1 412 458224665 458224244 2.270000e-137 499
12 TraesCS2D01G193600 chr1B 85.476 420 50 1 4 412 506134703 506134284 1.090000e-115 427
13 TraesCS2D01G193600 chr1B 80.516 426 64 12 1 411 336775903 336775482 4.110000e-80 309
14 TraesCS2D01G193600 chr5B 83.894 416 53 7 6 410 647972119 647971707 6.640000e-103 385
15 TraesCS2D01G193600 chr7D 83.333 426 54 6 1 412 30494855 30494433 1.110000e-100 377
16 TraesCS2D01G193600 chr7D 90.610 213 5 3 206 407 521701706 521701498 6.980000e-68 268
17 TraesCS2D01G193600 chr6A 84.848 363 43 4 62 412 58715957 58715595 5.210000e-94 355
18 TraesCS2D01G193600 chr6B 85.774 239 23 6 409 643 460268896 460269127 4.230000e-60 243
19 TraesCS2D01G193600 chr3B 89.730 185 8 1 238 411 25163570 25163386 4.260000e-55 226
20 TraesCS2D01G193600 chr3B 88.889 189 9 2 235 412 16141357 16141544 5.510000e-54 222


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G193600 chr2D 138750738 138754971 4233 False 7819 7819 100.0000 1 4234 1 chr2D.!!$F1 4233
1 TraesCS2D01G193600 chr2B 197207852 197211434 3582 False 2650 4431 94.4435 704 4234 2 chr2B.!!$F2 3530
2 TraesCS2D01G193600 chr2A 162292421 162295933 3512 True 2766 2902 95.3605 699 4234 2 chr2A.!!$R1 3535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.033109 GGGGCCTCAGCTTTGGTTAT 60.033 55.0 0.84 0.0 39.73 1.89 F
324 325 0.034380 TAGAGGTCCTGGTCTCCACG 60.034 60.0 0.00 0.0 0.00 4.94 F
2271 2348 0.032678 CTGATAAGACGGCCTGCGAT 59.967 55.0 0.00 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1329 1348 1.077429 GGAAGGCATGAGGTGGTCC 60.077 63.158 0.00 0.0 0.0 4.46 R
2291 2368 0.108233 CTCTCTGCTTCACTGCCTCC 60.108 60.000 0.00 0.0 0.0 4.30 R
3344 3467 1.213182 TCGAGCTCCCTCAGTCATAGT 59.787 52.381 8.47 0.0 38.0 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.880759 CAGTATGTAGAGATGAAGCAGGG 58.119 47.826 0.00 0.00 0.00 4.45
23 24 4.586421 CAGTATGTAGAGATGAAGCAGGGA 59.414 45.833 0.00 0.00 0.00 4.20
24 25 5.069648 CAGTATGTAGAGATGAAGCAGGGAA 59.930 44.000 0.00 0.00 0.00 3.97
25 26 3.895232 TGTAGAGATGAAGCAGGGAAC 57.105 47.619 0.00 0.00 0.00 3.62
26 27 3.445008 TGTAGAGATGAAGCAGGGAACT 58.555 45.455 0.00 0.00 46.44 3.01
27 28 4.610333 TGTAGAGATGAAGCAGGGAACTA 58.390 43.478 0.00 0.00 40.21 2.24
28 29 5.211973 TGTAGAGATGAAGCAGGGAACTAT 58.788 41.667 0.00 0.00 40.21 2.12
29 30 4.953940 AGAGATGAAGCAGGGAACTATC 57.046 45.455 0.00 0.00 40.21 2.08
30 31 4.555689 AGAGATGAAGCAGGGAACTATCT 58.444 43.478 0.00 0.00 40.21 1.98
31 32 4.968080 AGAGATGAAGCAGGGAACTATCTT 59.032 41.667 0.00 0.00 40.21 2.40
32 33 5.033589 AGATGAAGCAGGGAACTATCTTG 57.966 43.478 0.00 0.00 40.21 3.02
33 34 3.634397 TGAAGCAGGGAACTATCTTGG 57.366 47.619 0.00 0.00 40.21 3.61
34 35 2.239654 TGAAGCAGGGAACTATCTTGGG 59.760 50.000 0.00 0.00 40.21 4.12
35 36 1.216990 AGCAGGGAACTATCTTGGGG 58.783 55.000 0.00 0.00 40.21 4.96
36 37 0.466372 GCAGGGAACTATCTTGGGGC 60.466 60.000 0.00 0.00 40.21 5.80
37 38 0.183731 CAGGGAACTATCTTGGGGCC 59.816 60.000 0.00 0.00 40.21 5.80
38 39 0.046397 AGGGAACTATCTTGGGGCCT 59.954 55.000 0.84 0.00 40.61 5.19
39 40 0.474614 GGGAACTATCTTGGGGCCTC 59.525 60.000 0.84 0.00 0.00 4.70
40 41 1.213296 GGAACTATCTTGGGGCCTCA 58.787 55.000 0.00 0.00 0.00 3.86
41 42 1.141858 GGAACTATCTTGGGGCCTCAG 59.858 57.143 4.89 0.00 0.00 3.35
42 43 0.548510 AACTATCTTGGGGCCTCAGC 59.451 55.000 4.89 0.00 38.76 4.26
43 44 0.327000 ACTATCTTGGGGCCTCAGCT 60.327 55.000 4.89 0.00 39.73 4.24
44 45 0.842635 CTATCTTGGGGCCTCAGCTT 59.157 55.000 4.89 0.00 39.73 3.74
45 46 1.213926 CTATCTTGGGGCCTCAGCTTT 59.786 52.381 4.89 0.00 39.73 3.51
46 47 0.324091 ATCTTGGGGCCTCAGCTTTG 60.324 55.000 4.89 0.00 39.73 2.77
47 48 1.980772 CTTGGGGCCTCAGCTTTGG 60.981 63.158 4.89 0.00 39.73 3.28
48 49 2.720144 CTTGGGGCCTCAGCTTTGGT 62.720 60.000 4.89 0.00 39.73 3.67
49 50 2.118294 GGGGCCTCAGCTTTGGTT 59.882 61.111 0.84 0.00 39.73 3.67
50 51 1.382629 GGGGCCTCAGCTTTGGTTA 59.617 57.895 0.84 0.00 39.73 2.85
51 52 0.033109 GGGGCCTCAGCTTTGGTTAT 60.033 55.000 0.84 0.00 39.73 1.89
52 53 1.619704 GGGGCCTCAGCTTTGGTTATT 60.620 52.381 0.84 0.00 39.73 1.40
53 54 1.478105 GGGCCTCAGCTTTGGTTATTG 59.522 52.381 0.84 0.00 39.73 1.90
54 55 2.446435 GGCCTCAGCTTTGGTTATTGA 58.554 47.619 0.00 0.00 39.73 2.57
55 56 2.424956 GGCCTCAGCTTTGGTTATTGAG 59.575 50.000 0.00 0.00 39.73 3.02
58 59 3.690460 CTCAGCTTTGGTTATTGAGGGT 58.310 45.455 0.00 0.00 33.39 4.34
59 60 3.420893 TCAGCTTTGGTTATTGAGGGTG 58.579 45.455 0.00 0.00 0.00 4.61
60 61 3.157087 CAGCTTTGGTTATTGAGGGTGT 58.843 45.455 0.00 0.00 0.00 4.16
61 62 3.191371 CAGCTTTGGTTATTGAGGGTGTC 59.809 47.826 0.00 0.00 0.00 3.67
62 63 3.153919 GCTTTGGTTATTGAGGGTGTCA 58.846 45.455 0.00 0.00 0.00 3.58
63 64 3.057526 GCTTTGGTTATTGAGGGTGTCAC 60.058 47.826 0.00 0.00 33.71 3.67
64 65 2.465860 TGGTTATTGAGGGTGTCACG 57.534 50.000 0.00 0.00 33.71 4.35
65 66 1.002659 TGGTTATTGAGGGTGTCACGG 59.997 52.381 0.00 0.00 33.71 4.94
66 67 1.276989 GGTTATTGAGGGTGTCACGGA 59.723 52.381 0.00 0.00 33.71 4.69
67 68 2.344025 GTTATTGAGGGTGTCACGGAC 58.656 52.381 0.00 0.00 33.71 4.79
68 69 0.899720 TATTGAGGGTGTCACGGACC 59.100 55.000 0.00 0.00 33.71 4.46
74 75 4.295119 GTGTCACGGACCCAGCGT 62.295 66.667 2.23 0.00 0.00 5.07
75 76 3.986006 TGTCACGGACCCAGCGTC 61.986 66.667 2.23 0.00 41.15 5.19
76 77 3.986006 GTCACGGACCCAGCGTCA 61.986 66.667 0.00 0.00 43.95 4.35
77 78 3.986006 TCACGGACCCAGCGTCAC 61.986 66.667 0.00 0.00 43.95 3.67
78 79 3.991051 CACGGACCCAGCGTCACT 61.991 66.667 0.00 0.00 43.95 3.41
79 80 3.991051 ACGGACCCAGCGTCACTG 61.991 66.667 0.00 0.00 43.95 3.66
88 89 2.551270 GCGTCACTGGAAGCGTTG 59.449 61.111 0.00 0.00 38.70 4.10
89 90 2.954753 GCGTCACTGGAAGCGTTGG 61.955 63.158 0.00 0.00 38.70 3.77
90 91 2.946762 GTCACTGGAAGCGTTGGC 59.053 61.111 0.00 0.00 37.60 4.52
91 92 1.891919 GTCACTGGAAGCGTTGGCA 60.892 57.895 0.00 0.00 43.41 4.92
92 93 1.073025 TCACTGGAAGCGTTGGCAT 59.927 52.632 0.00 0.00 43.41 4.40
93 94 1.210931 CACTGGAAGCGTTGGCATG 59.789 57.895 0.00 0.00 43.41 4.06
94 95 2.180017 CTGGAAGCGTTGGCATGC 59.820 61.111 9.90 9.90 43.41 4.06
95 96 3.346631 CTGGAAGCGTTGGCATGCC 62.347 63.158 30.54 30.54 43.41 4.40
96 97 4.481112 GGAAGCGTTGGCATGCCG 62.481 66.667 30.87 20.15 43.41 5.69
120 121 4.704833 GCTGTGCTTGGCGGAGGA 62.705 66.667 0.00 0.00 0.00 3.71
121 122 2.743928 CTGTGCTTGGCGGAGGAC 60.744 66.667 5.58 5.58 38.34 3.85
122 123 3.241530 TGTGCTTGGCGGAGGACT 61.242 61.111 12.19 0.00 38.62 3.85
123 124 2.032681 GTGCTTGGCGGAGGACTT 59.967 61.111 5.33 0.00 35.39 3.01
124 125 2.032528 TGCTTGGCGGAGGACTTG 59.967 61.111 0.00 0.00 0.00 3.16
125 126 2.347490 GCTTGGCGGAGGACTTGA 59.653 61.111 0.00 0.00 0.00 3.02
126 127 1.302511 GCTTGGCGGAGGACTTGAA 60.303 57.895 0.00 0.00 0.00 2.69
127 128 0.678048 GCTTGGCGGAGGACTTGAAT 60.678 55.000 0.00 0.00 0.00 2.57
128 129 1.406887 GCTTGGCGGAGGACTTGAATA 60.407 52.381 0.00 0.00 0.00 1.75
129 130 2.746472 GCTTGGCGGAGGACTTGAATAT 60.746 50.000 0.00 0.00 0.00 1.28
130 131 2.910688 TGGCGGAGGACTTGAATATC 57.089 50.000 0.00 0.00 0.00 1.63
131 132 1.416401 TGGCGGAGGACTTGAATATCC 59.584 52.381 0.00 0.00 34.98 2.59
132 133 1.416401 GGCGGAGGACTTGAATATCCA 59.584 52.381 0.00 0.00 37.47 3.41
133 134 2.158813 GGCGGAGGACTTGAATATCCAA 60.159 50.000 0.00 0.00 37.47 3.53
134 135 3.541632 GCGGAGGACTTGAATATCCAAA 58.458 45.455 0.00 0.00 37.47 3.28
135 136 3.561725 GCGGAGGACTTGAATATCCAAAG 59.438 47.826 0.00 0.00 37.47 2.77
136 137 4.770795 CGGAGGACTTGAATATCCAAAGT 58.229 43.478 0.00 0.00 37.47 2.66
137 138 5.186198 CGGAGGACTTGAATATCCAAAGTT 58.814 41.667 0.00 0.00 37.47 2.66
138 139 5.648092 CGGAGGACTTGAATATCCAAAGTTT 59.352 40.000 0.00 0.00 37.47 2.66
139 140 6.151144 CGGAGGACTTGAATATCCAAAGTTTT 59.849 38.462 0.00 0.00 37.47 2.43
140 141 7.335924 CGGAGGACTTGAATATCCAAAGTTTTA 59.664 37.037 0.00 0.00 37.47 1.52
141 142 9.190317 GGAGGACTTGAATATCCAAAGTTTTAT 57.810 33.333 0.00 0.00 37.47 1.40
154 155 9.807649 ATCCAAAGTTTTATTATTGCATCAGAC 57.192 29.630 0.00 0.00 0.00 3.51
155 156 9.023962 TCCAAAGTTTTATTATTGCATCAGACT 57.976 29.630 0.00 0.00 0.00 3.24
156 157 9.079833 CCAAAGTTTTATTATTGCATCAGACTG 57.920 33.333 0.00 0.00 0.00 3.51
157 158 8.589629 CAAAGTTTTATTATTGCATCAGACTGC 58.410 33.333 0.00 0.00 42.62 4.40
172 173 3.019964 CTGCAAACAGGTAGTGGCA 57.980 52.632 0.00 0.00 40.48 4.92
173 174 0.877071 CTGCAAACAGGTAGTGGCAG 59.123 55.000 0.00 0.00 46.30 4.85
174 175 0.472044 TGCAAACAGGTAGTGGCAGA 59.528 50.000 0.00 0.00 36.70 4.26
175 176 1.073763 TGCAAACAGGTAGTGGCAGAT 59.926 47.619 0.00 0.00 36.70 2.90
176 177 2.304470 TGCAAACAGGTAGTGGCAGATA 59.696 45.455 0.00 0.00 36.70 1.98
177 178 3.054434 TGCAAACAGGTAGTGGCAGATAT 60.054 43.478 0.00 0.00 36.70 1.63
178 179 3.947834 GCAAACAGGTAGTGGCAGATATT 59.052 43.478 0.00 0.00 33.08 1.28
179 180 4.201950 GCAAACAGGTAGTGGCAGATATTG 60.202 45.833 0.00 0.00 33.08 1.90
180 181 3.845781 ACAGGTAGTGGCAGATATTGG 57.154 47.619 0.00 0.00 0.00 3.16
181 182 3.115390 ACAGGTAGTGGCAGATATTGGT 58.885 45.455 0.00 0.00 0.00 3.67
182 183 3.134804 ACAGGTAGTGGCAGATATTGGTC 59.865 47.826 0.00 0.00 0.00 4.02
183 184 2.365617 AGGTAGTGGCAGATATTGGTCG 59.634 50.000 0.00 0.00 0.00 4.79
184 185 2.364324 GGTAGTGGCAGATATTGGTCGA 59.636 50.000 0.00 0.00 0.00 4.20
185 186 3.181469 GGTAGTGGCAGATATTGGTCGAA 60.181 47.826 0.00 0.00 0.00 3.71
186 187 3.185246 AGTGGCAGATATTGGTCGAAG 57.815 47.619 0.00 0.00 0.00 3.79
187 188 1.599542 GTGGCAGATATTGGTCGAAGC 59.400 52.381 0.00 0.00 0.00 3.86
188 189 0.861837 GGCAGATATTGGTCGAAGCG 59.138 55.000 0.00 0.00 0.00 4.68
189 190 0.233332 GCAGATATTGGTCGAAGCGC 59.767 55.000 0.00 0.00 0.00 5.92
190 191 1.858091 CAGATATTGGTCGAAGCGCT 58.142 50.000 2.64 2.64 0.00 5.92
191 192 2.862530 GCAGATATTGGTCGAAGCGCTA 60.863 50.000 12.05 0.00 0.00 4.26
192 193 2.983136 CAGATATTGGTCGAAGCGCTAG 59.017 50.000 12.05 8.66 0.00 3.42
193 194 2.885266 AGATATTGGTCGAAGCGCTAGA 59.115 45.455 12.05 11.35 0.00 2.43
194 195 2.776312 TATTGGTCGAAGCGCTAGAG 57.224 50.000 12.05 5.19 0.00 2.43
195 196 0.103208 ATTGGTCGAAGCGCTAGAGG 59.897 55.000 12.05 0.00 0.00 3.69
196 197 1.945354 TTGGTCGAAGCGCTAGAGGG 61.945 60.000 12.05 0.00 0.00 4.30
197 198 2.119655 GGTCGAAGCGCTAGAGGGA 61.120 63.158 12.05 0.41 0.00 4.20
198 199 1.357334 GTCGAAGCGCTAGAGGGAG 59.643 63.158 12.05 0.00 0.00 4.30
199 200 1.096386 GTCGAAGCGCTAGAGGGAGA 61.096 60.000 12.05 0.00 0.00 3.71
200 201 0.179015 TCGAAGCGCTAGAGGGAGAT 60.179 55.000 12.05 0.00 0.00 2.75
201 202 1.071857 TCGAAGCGCTAGAGGGAGATA 59.928 52.381 12.05 0.00 0.00 1.98
202 203 2.088423 CGAAGCGCTAGAGGGAGATAT 58.912 52.381 12.05 0.00 0.00 1.63
203 204 2.159448 CGAAGCGCTAGAGGGAGATATG 60.159 54.545 12.05 0.00 0.00 1.78
204 205 1.846007 AGCGCTAGAGGGAGATATGG 58.154 55.000 8.99 0.00 0.00 2.74
205 206 1.356059 AGCGCTAGAGGGAGATATGGA 59.644 52.381 8.99 0.00 0.00 3.41
206 207 1.748493 GCGCTAGAGGGAGATATGGAG 59.252 57.143 0.00 0.00 0.00 3.86
207 208 1.748493 CGCTAGAGGGAGATATGGAGC 59.252 57.143 0.00 0.00 0.00 4.70
208 209 1.748493 GCTAGAGGGAGATATGGAGCG 59.252 57.143 0.00 0.00 0.00 5.03
209 210 2.619332 GCTAGAGGGAGATATGGAGCGA 60.619 54.545 0.00 0.00 0.00 4.93
210 211 2.917713 AGAGGGAGATATGGAGCGAT 57.082 50.000 0.00 0.00 0.00 4.58
211 212 4.687494 GCTAGAGGGAGATATGGAGCGATA 60.687 50.000 0.00 0.00 0.00 2.92
212 213 4.323569 AGAGGGAGATATGGAGCGATAA 57.676 45.455 0.00 0.00 0.00 1.75
213 214 4.877773 AGAGGGAGATATGGAGCGATAAT 58.122 43.478 0.00 0.00 0.00 1.28
214 215 4.892934 AGAGGGAGATATGGAGCGATAATC 59.107 45.833 0.00 0.00 0.00 1.75
215 216 4.614475 AGGGAGATATGGAGCGATAATCA 58.386 43.478 0.00 0.00 0.00 2.57
216 217 4.648762 AGGGAGATATGGAGCGATAATCAG 59.351 45.833 0.00 0.00 0.00 2.90
217 218 4.367450 GGAGATATGGAGCGATAATCAGC 58.633 47.826 0.00 0.00 0.00 4.26
218 219 4.039151 AGATATGGAGCGATAATCAGCG 57.961 45.455 0.00 0.00 38.61 5.18
219 220 3.696548 AGATATGGAGCGATAATCAGCGA 59.303 43.478 0.00 0.00 34.91 4.93
220 221 2.360553 ATGGAGCGATAATCAGCGAG 57.639 50.000 0.00 0.00 34.91 5.03
221 222 1.318576 TGGAGCGATAATCAGCGAGA 58.681 50.000 0.00 0.00 34.91 4.04
222 223 1.889170 TGGAGCGATAATCAGCGAGAT 59.111 47.619 0.00 0.00 39.09 2.75
223 224 2.095008 TGGAGCGATAATCAGCGAGATC 60.095 50.000 0.00 0.00 35.39 2.75
224 225 2.095008 GGAGCGATAATCAGCGAGATCA 60.095 50.000 0.00 0.00 35.39 2.92
225 226 3.569548 GAGCGATAATCAGCGAGATCAA 58.430 45.455 0.00 0.00 35.39 2.57
226 227 3.312828 AGCGATAATCAGCGAGATCAAC 58.687 45.455 0.00 0.00 35.39 3.18
227 228 2.410053 GCGATAATCAGCGAGATCAACC 59.590 50.000 0.00 0.00 35.39 3.77
228 229 3.858877 GCGATAATCAGCGAGATCAACCT 60.859 47.826 0.00 0.00 35.39 3.50
229 230 3.917380 CGATAATCAGCGAGATCAACCTC 59.083 47.826 0.00 0.00 35.39 3.85
230 231 4.557496 CGATAATCAGCGAGATCAACCTCA 60.557 45.833 0.00 0.00 35.39 3.86
231 232 3.616956 AATCAGCGAGATCAACCTCAA 57.383 42.857 0.00 0.00 35.39 3.02
232 233 3.616956 ATCAGCGAGATCAACCTCAAA 57.383 42.857 0.00 0.00 32.86 2.69
233 234 2.964740 TCAGCGAGATCAACCTCAAAG 58.035 47.619 0.00 0.00 32.86 2.77
234 235 1.396301 CAGCGAGATCAACCTCAAAGC 59.604 52.381 0.00 0.00 32.86 3.51
235 236 1.277557 AGCGAGATCAACCTCAAAGCT 59.722 47.619 0.00 0.00 32.86 3.74
236 237 1.396301 GCGAGATCAACCTCAAAGCTG 59.604 52.381 0.00 0.00 32.86 4.24
237 238 1.396301 CGAGATCAACCTCAAAGCTGC 59.604 52.381 0.00 0.00 32.86 5.25
238 239 1.742268 GAGATCAACCTCAAAGCTGCC 59.258 52.381 0.00 0.00 33.50 4.85
239 240 1.074405 AGATCAACCTCAAAGCTGCCA 59.926 47.619 0.00 0.00 0.00 4.92
240 241 1.200948 GATCAACCTCAAAGCTGCCAC 59.799 52.381 0.00 0.00 0.00 5.01
241 242 0.183492 TCAACCTCAAAGCTGCCACT 59.817 50.000 0.00 0.00 0.00 4.00
242 243 0.313043 CAACCTCAAAGCTGCCACTG 59.687 55.000 0.00 0.00 0.00 3.66
243 244 0.106519 AACCTCAAAGCTGCCACTGT 60.107 50.000 0.00 0.00 0.00 3.55
244 245 0.106519 ACCTCAAAGCTGCCACTGTT 60.107 50.000 0.00 0.00 0.00 3.16
245 246 0.595095 CCTCAAAGCTGCCACTGTTC 59.405 55.000 0.00 0.00 0.00 3.18
246 247 1.311859 CTCAAAGCTGCCACTGTTCA 58.688 50.000 0.00 0.00 0.00 3.18
247 248 1.677576 CTCAAAGCTGCCACTGTTCAA 59.322 47.619 0.00 0.00 0.00 2.69
248 249 2.295349 CTCAAAGCTGCCACTGTTCAAT 59.705 45.455 0.00 0.00 0.00 2.57
249 250 2.034939 TCAAAGCTGCCACTGTTCAATG 59.965 45.455 0.00 0.00 0.00 2.82
250 251 1.696063 AAGCTGCCACTGTTCAATGT 58.304 45.000 0.00 0.00 0.00 2.71
251 252 2.566833 AGCTGCCACTGTTCAATGTA 57.433 45.000 0.00 0.00 0.00 2.29
252 253 2.862541 AGCTGCCACTGTTCAATGTAA 58.137 42.857 0.00 0.00 0.00 2.41
253 254 3.221771 AGCTGCCACTGTTCAATGTAAA 58.778 40.909 0.00 0.00 0.00 2.01
254 255 3.828451 AGCTGCCACTGTTCAATGTAAAT 59.172 39.130 0.00 0.00 0.00 1.40
255 256 4.281688 AGCTGCCACTGTTCAATGTAAATT 59.718 37.500 0.00 0.00 0.00 1.82
256 257 4.990426 GCTGCCACTGTTCAATGTAAATTT 59.010 37.500 0.00 0.00 0.00 1.82
257 258 6.015519 AGCTGCCACTGTTCAATGTAAATTTA 60.016 34.615 0.00 0.00 0.00 1.40
258 259 6.089417 GCTGCCACTGTTCAATGTAAATTTAC 59.911 38.462 19.44 19.44 0.00 2.01
259 260 7.283625 TGCCACTGTTCAATGTAAATTTACT 57.716 32.000 24.81 10.99 34.77 2.24
260 261 7.721402 TGCCACTGTTCAATGTAAATTTACTT 58.279 30.769 24.81 17.70 34.77 2.24
261 262 8.200792 TGCCACTGTTCAATGTAAATTTACTTT 58.799 29.630 24.81 21.65 34.77 2.66
262 263 9.040939 GCCACTGTTCAATGTAAATTTACTTTT 57.959 29.630 24.81 16.78 34.77 2.27
270 271 9.658475 TCAATGTAAATTTACTTTTGAGTGTCG 57.342 29.630 26.26 15.35 34.59 4.35
271 272 9.445786 CAATGTAAATTTACTTTTGAGTGTCGT 57.554 29.630 24.81 2.04 33.38 4.34
272 273 9.445786 AATGTAAATTTACTTTTGAGTGTCGTG 57.554 29.630 24.81 0.00 34.77 4.35
273 274 6.908284 TGTAAATTTACTTTTGAGTGTCGTGC 59.092 34.615 24.81 0.00 34.77 5.34
274 275 5.493133 AATTTACTTTTGAGTGTCGTGCA 57.507 34.783 0.00 0.00 0.00 4.57
275 276 4.948608 TTTACTTTTGAGTGTCGTGCAA 57.051 36.364 0.00 0.00 0.00 4.08
276 277 4.530094 TTACTTTTGAGTGTCGTGCAAG 57.470 40.909 0.00 0.00 0.00 4.01
277 278 1.064060 ACTTTTGAGTGTCGTGCAAGC 59.936 47.619 0.00 0.00 0.00 4.01
278 279 1.063912 CTTTTGAGTGTCGTGCAAGCA 59.936 47.619 0.00 0.00 0.00 3.91
279 280 0.376852 TTTGAGTGTCGTGCAAGCAC 59.623 50.000 14.90 14.90 43.01 4.40
280 281 0.742635 TTGAGTGTCGTGCAAGCACA 60.743 50.000 23.23 12.85 46.47 4.57
281 282 0.532640 TGAGTGTCGTGCAAGCACAT 60.533 50.000 23.23 11.58 46.47 3.21
282 283 1.270041 TGAGTGTCGTGCAAGCACATA 60.270 47.619 23.23 9.25 46.47 2.29
283 284 1.391485 GAGTGTCGTGCAAGCACATAG 59.609 52.381 23.23 8.81 46.47 2.23
284 285 1.148310 GTGTCGTGCAAGCACATAGT 58.852 50.000 23.23 0.00 46.47 2.12
285 286 1.531149 GTGTCGTGCAAGCACATAGTT 59.469 47.619 23.23 0.00 46.47 2.24
286 287 2.032030 GTGTCGTGCAAGCACATAGTTT 60.032 45.455 23.23 0.00 46.47 2.66
287 288 3.185594 GTGTCGTGCAAGCACATAGTTTA 59.814 43.478 23.23 1.47 46.47 2.01
288 289 3.431912 TGTCGTGCAAGCACATAGTTTAG 59.568 43.478 23.23 6.13 46.47 1.85
289 290 2.415168 TCGTGCAAGCACATAGTTTAGC 59.585 45.455 23.23 0.00 46.47 3.09
290 291 2.159430 CGTGCAAGCACATAGTTTAGCA 59.841 45.455 23.23 0.00 46.47 3.49
291 292 3.364864 CGTGCAAGCACATAGTTTAGCAA 60.365 43.478 23.23 0.00 46.47 3.91
292 293 4.545610 GTGCAAGCACATAGTTTAGCAAA 58.454 39.130 19.47 0.00 45.53 3.68
293 294 4.981674 GTGCAAGCACATAGTTTAGCAAAA 59.018 37.500 19.47 0.00 45.53 2.44
294 295 5.634859 GTGCAAGCACATAGTTTAGCAAAAT 59.365 36.000 19.47 0.00 45.53 1.82
295 296 6.146021 GTGCAAGCACATAGTTTAGCAAAATT 59.854 34.615 19.47 0.00 45.53 1.82
296 297 6.705381 TGCAAGCACATAGTTTAGCAAAATTT 59.295 30.769 0.00 0.00 0.00 1.82
297 298 7.226325 TGCAAGCACATAGTTTAGCAAAATTTT 59.774 29.630 0.00 0.00 0.00 1.82
298 299 7.741652 GCAAGCACATAGTTTAGCAAAATTTTC 59.258 33.333 0.00 0.00 0.00 2.29
299 300 8.763356 CAAGCACATAGTTTAGCAAAATTTTCA 58.237 29.630 0.00 0.00 0.00 2.69
300 301 8.298030 AGCACATAGTTTAGCAAAATTTTCAC 57.702 30.769 0.00 0.00 0.00 3.18
301 302 8.143835 AGCACATAGTTTAGCAAAATTTTCACT 58.856 29.630 0.00 4.46 0.00 3.41
302 303 8.764287 GCACATAGTTTAGCAAAATTTTCACTT 58.236 29.630 0.00 0.00 0.00 3.16
310 311 9.965824 TTTAGCAAAATTTTCACTTTCTAGAGG 57.034 29.630 0.00 0.00 0.00 3.69
311 312 7.588497 AGCAAAATTTTCACTTTCTAGAGGT 57.412 32.000 0.00 0.00 0.00 3.85
312 313 7.652727 AGCAAAATTTTCACTTTCTAGAGGTC 58.347 34.615 0.00 0.00 0.00 3.85
313 314 6.863645 GCAAAATTTTCACTTTCTAGAGGTCC 59.136 38.462 0.00 0.00 0.00 4.46
314 315 7.255625 GCAAAATTTTCACTTTCTAGAGGTCCT 60.256 37.037 0.00 0.00 0.00 3.85
315 316 7.751768 AAATTTTCACTTTCTAGAGGTCCTG 57.248 36.000 0.00 0.00 0.00 3.86
316 317 4.891992 TTTCACTTTCTAGAGGTCCTGG 57.108 45.455 0.00 0.00 0.00 4.45
317 318 3.544698 TCACTTTCTAGAGGTCCTGGT 57.455 47.619 0.00 0.00 0.00 4.00
318 319 3.432378 TCACTTTCTAGAGGTCCTGGTC 58.568 50.000 0.00 0.00 0.00 4.02
319 320 3.076182 TCACTTTCTAGAGGTCCTGGTCT 59.924 47.826 0.00 0.00 0.00 3.85
320 321 3.445805 CACTTTCTAGAGGTCCTGGTCTC 59.554 52.174 0.00 10.34 0.00 3.36
321 322 2.830651 TTCTAGAGGTCCTGGTCTCC 57.169 55.000 0.00 6.68 0.00 3.71
322 323 1.682478 TCTAGAGGTCCTGGTCTCCA 58.318 55.000 0.00 3.19 0.00 3.86
323 324 1.285373 TCTAGAGGTCCTGGTCTCCAC 59.715 57.143 0.00 5.76 0.00 4.02
324 325 0.034380 TAGAGGTCCTGGTCTCCACG 60.034 60.000 0.00 0.00 0.00 4.94
325 326 1.606889 GAGGTCCTGGTCTCCACGT 60.607 63.158 0.00 0.00 0.00 4.49
326 327 1.596895 GAGGTCCTGGTCTCCACGTC 61.597 65.000 0.00 0.45 0.00 4.34
327 328 1.606889 GGTCCTGGTCTCCACGTCT 60.607 63.158 0.00 0.00 0.00 4.18
328 329 1.587054 GTCCTGGTCTCCACGTCTG 59.413 63.158 0.00 0.00 0.00 3.51
329 330 1.606601 TCCTGGTCTCCACGTCTGG 60.607 63.158 0.00 0.00 39.23 3.86
330 331 1.908793 CCTGGTCTCCACGTCTGGT 60.909 63.158 0.00 0.00 38.90 4.00
331 332 1.472662 CCTGGTCTCCACGTCTGGTT 61.473 60.000 0.00 0.00 38.90 3.67
332 333 0.393077 CTGGTCTCCACGTCTGGTTT 59.607 55.000 0.00 0.00 38.90 3.27
333 334 0.105964 TGGTCTCCACGTCTGGTTTG 59.894 55.000 0.00 0.00 38.90 2.93
334 335 0.602905 GGTCTCCACGTCTGGTTTGG 60.603 60.000 0.00 0.00 38.90 3.28
335 336 1.070786 TCTCCACGTCTGGTTTGGC 59.929 57.895 0.00 0.00 38.90 4.52
336 337 2.280524 TCCACGTCTGGTTTGGCG 60.281 61.111 0.00 0.00 38.90 5.69
337 338 2.590575 CCACGTCTGGTTTGGCGT 60.591 61.111 0.00 0.00 38.14 5.68
338 339 2.184167 CCACGTCTGGTTTGGCGTT 61.184 57.895 0.00 0.00 35.25 4.84
339 340 1.278637 CACGTCTGGTTTGGCGTTC 59.721 57.895 0.00 0.00 35.25 3.95
340 341 1.890510 ACGTCTGGTTTGGCGTTCC 60.891 57.895 0.00 0.00 33.54 3.62
341 342 1.597027 CGTCTGGTTTGGCGTTCCT 60.597 57.895 0.00 0.00 0.00 3.36
342 343 1.164041 CGTCTGGTTTGGCGTTCCTT 61.164 55.000 0.00 0.00 0.00 3.36
343 344 1.874739 CGTCTGGTTTGGCGTTCCTTA 60.875 52.381 0.00 0.00 0.00 2.69
344 345 1.534163 GTCTGGTTTGGCGTTCCTTAC 59.466 52.381 0.00 0.00 0.00 2.34
345 346 1.141254 TCTGGTTTGGCGTTCCTTACA 59.859 47.619 0.00 0.00 0.00 2.41
346 347 1.950909 CTGGTTTGGCGTTCCTTACAA 59.049 47.619 0.00 0.00 0.00 2.41
347 348 1.677052 TGGTTTGGCGTTCCTTACAAC 59.323 47.619 0.00 0.00 0.00 3.32
348 349 1.001048 GGTTTGGCGTTCCTTACAACC 60.001 52.381 0.00 0.00 0.00 3.77
349 350 1.677052 GTTTGGCGTTCCTTACAACCA 59.323 47.619 0.00 0.00 32.36 3.67
350 351 1.600023 TTGGCGTTCCTTACAACCAG 58.400 50.000 0.00 0.00 34.94 4.00
351 352 0.759959 TGGCGTTCCTTACAACCAGA 59.240 50.000 0.00 0.00 31.07 3.86
352 353 1.141254 TGGCGTTCCTTACAACCAGAA 59.859 47.619 0.00 0.00 31.07 3.02
353 354 1.534163 GGCGTTCCTTACAACCAGAAC 59.466 52.381 0.00 0.00 36.19 3.01
354 355 1.534163 GCGTTCCTTACAACCAGAACC 59.466 52.381 0.00 0.00 36.16 3.62
355 356 1.796459 CGTTCCTTACAACCAGAACCG 59.204 52.381 0.00 0.00 36.16 4.44
356 357 2.804212 CGTTCCTTACAACCAGAACCGT 60.804 50.000 0.00 0.00 36.16 4.83
357 358 3.552684 CGTTCCTTACAACCAGAACCGTA 60.553 47.826 0.00 0.00 36.16 4.02
358 359 4.572909 GTTCCTTACAACCAGAACCGTAT 58.427 43.478 0.00 0.00 33.98 3.06
359 360 4.460948 TCCTTACAACCAGAACCGTATC 57.539 45.455 0.00 0.00 0.00 2.24
360 361 3.196254 TCCTTACAACCAGAACCGTATCC 59.804 47.826 0.00 0.00 0.00 2.59
361 362 3.528532 CTTACAACCAGAACCGTATCCC 58.471 50.000 0.00 0.00 0.00 3.85
362 363 1.354101 ACAACCAGAACCGTATCCCA 58.646 50.000 0.00 0.00 0.00 4.37
363 364 1.002773 ACAACCAGAACCGTATCCCAC 59.997 52.381 0.00 0.00 0.00 4.61
364 365 1.278127 CAACCAGAACCGTATCCCACT 59.722 52.381 0.00 0.00 0.00 4.00
365 366 1.652947 ACCAGAACCGTATCCCACTT 58.347 50.000 0.00 0.00 0.00 3.16
366 367 1.553704 ACCAGAACCGTATCCCACTTC 59.446 52.381 0.00 0.00 0.00 3.01
367 368 1.553248 CCAGAACCGTATCCCACTTCA 59.447 52.381 0.00 0.00 0.00 3.02
368 369 2.170607 CCAGAACCGTATCCCACTTCAT 59.829 50.000 0.00 0.00 0.00 2.57
369 370 3.198068 CAGAACCGTATCCCACTTCATG 58.802 50.000 0.00 0.00 0.00 3.07
370 371 2.838202 AGAACCGTATCCCACTTCATGT 59.162 45.455 0.00 0.00 0.00 3.21
371 372 2.691409 ACCGTATCCCACTTCATGTG 57.309 50.000 0.00 0.00 45.80 3.21
382 383 4.508461 CACTTCATGTGGCTTTTGATGA 57.492 40.909 0.00 0.00 42.68 2.92
383 384 4.873817 CACTTCATGTGGCTTTTGATGAA 58.126 39.130 0.00 0.00 42.68 2.57
384 385 5.475719 CACTTCATGTGGCTTTTGATGAAT 58.524 37.500 0.00 0.00 42.68 2.57
385 386 6.623486 CACTTCATGTGGCTTTTGATGAATA 58.377 36.000 0.00 0.00 42.68 1.75
386 387 7.092079 CACTTCATGTGGCTTTTGATGAATAA 58.908 34.615 0.00 0.00 42.68 1.40
387 388 7.599621 CACTTCATGTGGCTTTTGATGAATAAA 59.400 33.333 0.00 0.00 42.68 1.40
388 389 7.816031 ACTTCATGTGGCTTTTGATGAATAAAG 59.184 33.333 0.00 0.00 34.99 1.85
389 390 7.230849 TCATGTGGCTTTTGATGAATAAAGT 57.769 32.000 0.00 0.00 34.59 2.66
390 391 7.669427 TCATGTGGCTTTTGATGAATAAAGTT 58.331 30.769 0.00 0.00 34.59 2.66
391 392 7.599621 TCATGTGGCTTTTGATGAATAAAGTTG 59.400 33.333 0.00 0.00 34.59 3.16
392 393 7.048629 TGTGGCTTTTGATGAATAAAGTTGA 57.951 32.000 0.00 0.00 34.59 3.18
393 394 7.669427 TGTGGCTTTTGATGAATAAAGTTGAT 58.331 30.769 0.00 0.00 34.59 2.57
394 395 8.149647 TGTGGCTTTTGATGAATAAAGTTGATT 58.850 29.630 0.00 0.00 34.59 2.57
395 396 8.992073 GTGGCTTTTGATGAATAAAGTTGATTT 58.008 29.630 0.00 0.00 34.59 2.17
396 397 9.206870 TGGCTTTTGATGAATAAAGTTGATTTC 57.793 29.630 0.00 0.00 34.59 2.17
397 398 9.206870 GGCTTTTGATGAATAAAGTTGATTTCA 57.793 29.630 0.00 0.00 34.59 2.69
400 401 9.487790 TTTTGATGAATAAAGTTGATTTCACCC 57.512 29.630 0.00 0.00 31.45 4.61
401 402 7.169158 TGATGAATAAAGTTGATTTCACCCC 57.831 36.000 0.00 0.00 31.45 4.95
402 403 6.953520 TGATGAATAAAGTTGATTTCACCCCT 59.046 34.615 0.00 0.00 31.45 4.79
403 404 6.834168 TGAATAAAGTTGATTTCACCCCTC 57.166 37.500 0.00 0.00 32.01 4.30
404 405 6.310941 TGAATAAAGTTGATTTCACCCCTCA 58.689 36.000 0.00 0.00 32.01 3.86
405 406 6.780031 TGAATAAAGTTGATTTCACCCCTCAA 59.220 34.615 0.00 0.00 32.01 3.02
406 407 7.288852 TGAATAAAGTTGATTTCACCCCTCAAA 59.711 33.333 0.00 0.00 31.21 2.69
407 408 5.948742 AAAGTTGATTTCACCCCTCAAAA 57.051 34.783 0.00 0.00 31.21 2.44
408 409 5.948742 AAGTTGATTTCACCCCTCAAAAA 57.051 34.783 0.00 0.00 31.21 1.94
426 427 1.441311 AAAAAGGGGCACACAAGCG 59.559 52.632 0.00 0.00 34.64 4.68
427 428 1.040339 AAAAAGGGGCACACAAGCGA 61.040 50.000 0.00 0.00 34.64 4.93
428 429 1.455383 AAAAGGGGCACACAAGCGAG 61.455 55.000 0.00 0.00 34.64 5.03
429 430 2.624674 AAAGGGGCACACAAGCGAGT 62.625 55.000 0.00 0.00 34.64 4.18
430 431 2.594592 GGGGCACACAAGCGAGTT 60.595 61.111 0.00 0.00 34.64 3.01
431 432 2.639286 GGGCACACAAGCGAGTTG 59.361 61.111 0.00 0.00 42.48 3.16
438 439 4.368391 CAAGCGAGTTGTCAGGCT 57.632 55.556 0.00 0.00 37.33 4.58
439 440 2.157421 CAAGCGAGTTGTCAGGCTC 58.843 57.895 0.00 0.00 33.99 4.70
442 443 2.259818 CGAGTTGTCAGGCTCGCT 59.740 61.111 13.41 0.00 46.01 4.93
443 444 1.373497 CGAGTTGTCAGGCTCGCTT 60.373 57.895 13.41 0.00 46.01 4.68
444 445 1.347817 CGAGTTGTCAGGCTCGCTTC 61.348 60.000 13.41 0.00 46.01 3.86
445 446 0.037790 GAGTTGTCAGGCTCGCTTCT 60.038 55.000 0.00 0.00 0.00 2.85
446 447 1.202582 GAGTTGTCAGGCTCGCTTCTA 59.797 52.381 0.00 0.00 0.00 2.10
447 448 1.203523 AGTTGTCAGGCTCGCTTCTAG 59.796 52.381 0.00 0.00 0.00 2.43
448 449 0.108615 TTGTCAGGCTCGCTTCTAGC 60.109 55.000 0.00 0.00 39.33 3.42
454 455 4.919653 CTCGCTTCTAGCCAGCAA 57.080 55.556 12.65 0.00 38.18 3.91
455 456 3.376218 CTCGCTTCTAGCCAGCAAT 57.624 52.632 12.65 0.00 38.18 3.56
456 457 2.515926 CTCGCTTCTAGCCAGCAATA 57.484 50.000 12.65 0.00 38.18 1.90
457 458 2.826428 CTCGCTTCTAGCCAGCAATAA 58.174 47.619 12.65 0.00 38.18 1.40
458 459 3.198068 CTCGCTTCTAGCCAGCAATAAA 58.802 45.455 12.65 0.00 38.18 1.40
459 460 3.605634 TCGCTTCTAGCCAGCAATAAAA 58.394 40.909 12.65 0.00 38.18 1.52
460 461 4.006989 TCGCTTCTAGCCAGCAATAAAAA 58.993 39.130 12.65 0.00 38.18 1.94
461 462 4.640201 TCGCTTCTAGCCAGCAATAAAAAT 59.360 37.500 12.65 0.00 38.18 1.82
462 463 5.820423 TCGCTTCTAGCCAGCAATAAAAATA 59.180 36.000 12.65 0.00 38.18 1.40
463 464 6.317642 TCGCTTCTAGCCAGCAATAAAAATAA 59.682 34.615 12.65 0.00 38.18 1.40
464 465 6.972328 CGCTTCTAGCCAGCAATAAAAATAAA 59.028 34.615 12.65 0.00 38.18 1.40
465 466 7.044052 CGCTTCTAGCCAGCAATAAAAATAAAC 60.044 37.037 12.65 0.00 38.18 2.01
466 467 7.044052 GCTTCTAGCCAGCAATAAAAATAAACG 60.044 37.037 8.47 0.00 37.22 3.60
467 468 7.618502 TCTAGCCAGCAATAAAAATAAACGA 57.381 32.000 0.00 0.00 0.00 3.85
468 469 8.046294 TCTAGCCAGCAATAAAAATAAACGAA 57.954 30.769 0.00 0.00 0.00 3.85
469 470 8.516234 TCTAGCCAGCAATAAAAATAAACGAAA 58.484 29.630 0.00 0.00 0.00 3.46
470 471 9.301153 CTAGCCAGCAATAAAAATAAACGAAAT 57.699 29.630 0.00 0.00 0.00 2.17
471 472 7.962917 AGCCAGCAATAAAAATAAACGAAATG 58.037 30.769 0.00 0.00 0.00 2.32
472 473 7.816995 AGCCAGCAATAAAAATAAACGAAATGA 59.183 29.630 0.00 0.00 0.00 2.57
473 474 7.897800 GCCAGCAATAAAAATAAACGAAATGAC 59.102 33.333 0.00 0.00 0.00 3.06
474 475 8.920665 CCAGCAATAAAAATAAACGAAATGACA 58.079 29.630 0.00 0.00 0.00 3.58
477 478 9.233960 GCAATAAAAATAAACGAAATGACAACG 57.766 29.630 0.00 0.00 0.00 4.10
480 481 6.669485 AAAATAAACGAAATGACAACGAGC 57.331 33.333 0.00 0.00 0.00 5.03
481 482 5.351233 AATAAACGAAATGACAACGAGCA 57.649 34.783 0.00 0.00 0.00 4.26
482 483 2.663279 AACGAAATGACAACGAGCAC 57.337 45.000 0.00 0.00 0.00 4.40
483 484 1.865865 ACGAAATGACAACGAGCACT 58.134 45.000 0.00 0.00 0.00 4.40
484 485 1.792949 ACGAAATGACAACGAGCACTC 59.207 47.619 0.00 0.00 0.00 3.51
485 486 1.126846 CGAAATGACAACGAGCACTCC 59.873 52.381 0.00 0.00 0.00 3.85
486 487 2.143122 GAAATGACAACGAGCACTCCA 58.857 47.619 0.00 0.00 0.00 3.86
487 488 2.254546 AATGACAACGAGCACTCCAA 57.745 45.000 0.00 0.00 0.00 3.53
488 489 2.254546 ATGACAACGAGCACTCCAAA 57.745 45.000 0.00 0.00 0.00 3.28
489 490 2.254546 TGACAACGAGCACTCCAAAT 57.745 45.000 0.00 0.00 0.00 2.32
490 491 3.394674 TGACAACGAGCACTCCAAATA 57.605 42.857 0.00 0.00 0.00 1.40
491 492 3.064207 TGACAACGAGCACTCCAAATAC 58.936 45.455 0.00 0.00 0.00 1.89
492 493 3.064207 GACAACGAGCACTCCAAATACA 58.936 45.455 0.00 0.00 0.00 2.29
493 494 2.806244 ACAACGAGCACTCCAAATACAC 59.194 45.455 0.00 0.00 0.00 2.90
494 495 1.710013 ACGAGCACTCCAAATACACG 58.290 50.000 0.00 0.00 0.00 4.49
495 496 1.271379 ACGAGCACTCCAAATACACGA 59.729 47.619 0.00 0.00 0.00 4.35
496 497 2.288579 ACGAGCACTCCAAATACACGAA 60.289 45.455 0.00 0.00 0.00 3.85
497 498 2.930040 CGAGCACTCCAAATACACGAAT 59.070 45.455 0.00 0.00 0.00 3.34
498 499 3.000322 CGAGCACTCCAAATACACGAATC 60.000 47.826 0.00 0.00 0.00 2.52
499 500 4.184629 GAGCACTCCAAATACACGAATCT 58.815 43.478 0.00 0.00 0.00 2.40
500 501 4.579869 AGCACTCCAAATACACGAATCTT 58.420 39.130 0.00 0.00 0.00 2.40
501 502 4.393062 AGCACTCCAAATACACGAATCTTG 59.607 41.667 0.00 0.00 0.00 3.02
502 503 4.391830 GCACTCCAAATACACGAATCTTGA 59.608 41.667 0.00 0.00 0.00 3.02
503 504 5.671329 GCACTCCAAATACACGAATCTTGAC 60.671 44.000 0.00 0.00 0.00 3.18
504 505 5.408299 CACTCCAAATACACGAATCTTGACA 59.592 40.000 0.00 0.00 0.00 3.58
505 506 5.995282 ACTCCAAATACACGAATCTTGACAA 59.005 36.000 0.00 0.00 0.00 3.18
506 507 6.147821 ACTCCAAATACACGAATCTTGACAAG 59.852 38.462 9.03 9.03 0.00 3.16
507 508 5.411361 TCCAAATACACGAATCTTGACAAGG 59.589 40.000 15.13 1.74 0.00 3.61
508 509 5.411361 CCAAATACACGAATCTTGACAAGGA 59.589 40.000 15.13 2.90 0.00 3.36
509 510 6.402550 CCAAATACACGAATCTTGACAAGGAG 60.403 42.308 15.13 6.90 0.00 3.69
510 511 3.753294 ACACGAATCTTGACAAGGAGT 57.247 42.857 15.13 7.47 0.00 3.85
511 512 4.073293 ACACGAATCTTGACAAGGAGTT 57.927 40.909 15.13 7.99 0.00 3.01
512 513 5.209818 ACACGAATCTTGACAAGGAGTTA 57.790 39.130 15.13 0.00 0.00 2.24
513 514 5.230942 ACACGAATCTTGACAAGGAGTTAG 58.769 41.667 15.13 10.23 0.00 2.34
514 515 5.010719 ACACGAATCTTGACAAGGAGTTAGA 59.989 40.000 15.13 0.00 0.00 2.10
515 516 6.102663 CACGAATCTTGACAAGGAGTTAGAT 58.897 40.000 15.13 0.00 35.00 1.98
516 517 6.035435 CACGAATCTTGACAAGGAGTTAGATG 59.965 42.308 15.13 1.33 34.28 2.90
517 518 6.071334 ACGAATCTTGACAAGGAGTTAGATGA 60.071 38.462 15.13 0.00 34.28 2.92
518 519 6.475076 CGAATCTTGACAAGGAGTTAGATGAG 59.525 42.308 15.13 0.00 34.28 2.90
519 520 7.487822 AATCTTGACAAGGAGTTAGATGAGA 57.512 36.000 15.13 0.00 34.28 3.27
520 521 6.522625 TCTTGACAAGGAGTTAGATGAGAG 57.477 41.667 15.13 0.00 0.00 3.20
521 522 6.249192 TCTTGACAAGGAGTTAGATGAGAGA 58.751 40.000 15.13 0.00 0.00 3.10
522 523 6.894654 TCTTGACAAGGAGTTAGATGAGAGAT 59.105 38.462 15.13 0.00 0.00 2.75
523 524 8.055790 TCTTGACAAGGAGTTAGATGAGAGATA 58.944 37.037 15.13 0.00 0.00 1.98
524 525 8.595362 TTGACAAGGAGTTAGATGAGAGATAA 57.405 34.615 0.00 0.00 0.00 1.75
525 526 8.001881 TGACAAGGAGTTAGATGAGAGATAAC 57.998 38.462 0.00 0.00 0.00 1.89
526 527 7.836685 TGACAAGGAGTTAGATGAGAGATAACT 59.163 37.037 0.00 0.00 41.28 2.24
527 528 8.006298 ACAAGGAGTTAGATGAGAGATAACTG 57.994 38.462 1.82 0.00 39.28 3.16
528 529 7.836685 ACAAGGAGTTAGATGAGAGATAACTGA 59.163 37.037 1.82 0.00 39.28 3.41
529 530 8.690884 CAAGGAGTTAGATGAGAGATAACTGAA 58.309 37.037 1.82 0.00 39.28 3.02
530 531 9.432982 AAGGAGTTAGATGAGAGATAACTGAAT 57.567 33.333 1.82 0.00 39.28 2.57
531 532 9.432982 AGGAGTTAGATGAGAGATAACTGAATT 57.567 33.333 1.82 0.00 39.28 2.17
588 589 9.341078 TCTTATAGCAATTAATCATGTGCTTGA 57.659 29.630 15.57 8.28 44.79 3.02
589 590 9.955208 CTTATAGCAATTAATCATGTGCTTGAA 57.045 29.630 15.57 10.18 44.79 2.69
590 591 9.955208 TTATAGCAATTAATCATGTGCTTGAAG 57.045 29.630 15.57 0.00 44.79 3.02
591 592 6.519679 AGCAATTAATCATGTGCTTGAAGA 57.480 33.333 6.55 0.00 44.79 2.87
592 593 6.327934 AGCAATTAATCATGTGCTTGAAGAC 58.672 36.000 6.55 0.00 44.79 3.01
593 594 6.152323 AGCAATTAATCATGTGCTTGAAGACT 59.848 34.615 6.55 0.00 44.79 3.24
594 595 6.810182 GCAATTAATCATGTGCTTGAAGACTT 59.190 34.615 0.00 0.00 34.13 3.01
595 596 7.970061 GCAATTAATCATGTGCTTGAAGACTTA 59.030 33.333 0.00 0.00 34.13 2.24
596 597 9.499585 CAATTAATCATGTGCTTGAAGACTTAG 57.500 33.333 0.00 0.00 0.00 2.18
597 598 9.453572 AATTAATCATGTGCTTGAAGACTTAGA 57.546 29.630 0.00 0.00 0.00 2.10
598 599 9.624373 ATTAATCATGTGCTTGAAGACTTAGAT 57.376 29.630 0.00 0.00 0.00 1.98
599 600 6.922247 ATCATGTGCTTGAAGACTTAGATG 57.078 37.500 0.00 0.00 0.00 2.90
600 601 5.798132 TCATGTGCTTGAAGACTTAGATGT 58.202 37.500 0.00 0.00 0.00 3.06
601 602 5.640783 TCATGTGCTTGAAGACTTAGATGTG 59.359 40.000 0.00 0.00 0.00 3.21
602 603 5.213891 TGTGCTTGAAGACTTAGATGTGA 57.786 39.130 0.00 0.00 0.00 3.58
603 604 5.233225 TGTGCTTGAAGACTTAGATGTGAG 58.767 41.667 0.00 0.00 0.00 3.51
604 605 4.629200 GTGCTTGAAGACTTAGATGTGAGG 59.371 45.833 0.00 0.00 0.00 3.86
605 606 4.284490 TGCTTGAAGACTTAGATGTGAGGT 59.716 41.667 0.00 0.00 0.00 3.85
606 607 5.480422 TGCTTGAAGACTTAGATGTGAGGTA 59.520 40.000 0.00 0.00 0.00 3.08
607 608 6.014584 TGCTTGAAGACTTAGATGTGAGGTAA 60.015 38.462 0.00 0.00 0.00 2.85
608 609 7.044798 GCTTGAAGACTTAGATGTGAGGTAAT 58.955 38.462 0.00 0.00 0.00 1.89
609 610 8.198109 GCTTGAAGACTTAGATGTGAGGTAATA 58.802 37.037 0.00 0.00 0.00 0.98
616 617 9.929180 GACTTAGATGTGAGGTAATATATTGCA 57.071 33.333 14.46 2.84 0.00 4.08
635 636 6.609237 TTGCATCTAGATGTGAATAGCAAC 57.391 37.500 28.92 12.20 40.80 4.17
636 637 5.059161 TGCATCTAGATGTGAATAGCAACC 58.941 41.667 28.92 11.76 40.80 3.77
637 638 4.453819 GCATCTAGATGTGAATAGCAACCC 59.546 45.833 28.92 8.17 40.80 4.11
638 639 4.689612 TCTAGATGTGAATAGCAACCCC 57.310 45.455 0.00 0.00 0.00 4.95
639 640 4.298626 TCTAGATGTGAATAGCAACCCCT 58.701 43.478 0.00 0.00 0.00 4.79
640 641 4.721776 TCTAGATGTGAATAGCAACCCCTT 59.278 41.667 0.00 0.00 0.00 3.95
641 642 4.322057 AGATGTGAATAGCAACCCCTTT 57.678 40.909 0.00 0.00 0.00 3.11
642 643 4.677182 AGATGTGAATAGCAACCCCTTTT 58.323 39.130 0.00 0.00 0.00 2.27
643 644 5.086621 AGATGTGAATAGCAACCCCTTTTT 58.913 37.500 0.00 0.00 0.00 1.94
753 754 1.666209 CCTATTGGGCCTGGCGTTTG 61.666 60.000 13.40 0.53 0.00 2.93
822 837 6.457799 GGCCCAATGTTAACAATACTCTAACG 60.458 42.308 13.23 0.00 0.00 3.18
1296 1315 2.761195 CGACGACCTCATCCTCGCA 61.761 63.158 0.00 0.00 30.73 5.10
1329 1348 2.187946 GGCCAGGTCATCGAGGTG 59.812 66.667 0.00 0.00 0.00 4.00
1832 1851 2.526120 GCAGCATAAGACCCGTCGC 61.526 63.158 0.00 0.00 34.09 5.19
1877 1896 7.274250 CAGTGTAAAGCCATTTCTCTAATTTGC 59.726 37.037 0.00 0.00 0.00 3.68
1915 1950 4.969484 TCCCAAGAACTCAACCTTCTAAC 58.031 43.478 0.00 0.00 0.00 2.34
2195 2230 1.154205 CGAGCTTAACGAGGCATGGG 61.154 60.000 0.00 0.00 0.00 4.00
2262 2339 5.597813 AAGTTCTGTTTGCTGATAAGACG 57.402 39.130 0.00 0.00 0.00 4.18
2263 2340 3.997021 AGTTCTGTTTGCTGATAAGACGG 59.003 43.478 0.00 0.00 0.00 4.79
2264 2341 2.346803 TCTGTTTGCTGATAAGACGGC 58.653 47.619 0.00 0.00 41.89 5.68
2265 2342 1.398390 CTGTTTGCTGATAAGACGGCC 59.602 52.381 0.00 0.00 40.96 6.13
2266 2343 1.003118 TGTTTGCTGATAAGACGGCCT 59.997 47.619 0.00 0.00 40.96 5.19
2267 2344 1.398390 GTTTGCTGATAAGACGGCCTG 59.602 52.381 0.00 0.00 40.96 4.85
2268 2345 0.744414 TTGCTGATAAGACGGCCTGC 60.744 55.000 0.00 0.00 40.96 4.85
2269 2346 2.240500 GCTGATAAGACGGCCTGCG 61.241 63.158 0.00 0.00 36.30 5.18
2270 2347 1.437573 CTGATAAGACGGCCTGCGA 59.562 57.895 0.00 0.00 0.00 5.10
2271 2348 0.032678 CTGATAAGACGGCCTGCGAT 59.967 55.000 0.00 0.00 0.00 4.58
2272 2349 0.464036 TGATAAGACGGCCTGCGATT 59.536 50.000 0.00 0.00 0.00 3.34
2273 2350 1.134521 TGATAAGACGGCCTGCGATTT 60.135 47.619 0.00 0.00 0.00 2.17
2274 2351 1.527311 GATAAGACGGCCTGCGATTTC 59.473 52.381 0.00 0.00 0.00 2.17
2275 2352 0.535335 TAAGACGGCCTGCGATTTCT 59.465 50.000 0.00 0.00 0.00 2.52
2276 2353 1.021390 AAGACGGCCTGCGATTTCTG 61.021 55.000 0.00 0.00 0.00 3.02
2277 2354 1.741770 GACGGCCTGCGATTTCTGT 60.742 57.895 0.00 0.00 0.00 3.41
2278 2355 1.298859 GACGGCCTGCGATTTCTGTT 61.299 55.000 0.00 0.00 0.00 3.16
2279 2356 1.298859 ACGGCCTGCGATTTCTGTTC 61.299 55.000 0.00 0.00 0.00 3.18
2280 2357 1.803289 GGCCTGCGATTTCTGTTCC 59.197 57.895 0.00 0.00 0.00 3.62
2281 2358 0.960364 GGCCTGCGATTTCTGTTCCA 60.960 55.000 0.00 0.00 0.00 3.53
2282 2359 0.881118 GCCTGCGATTTCTGTTCCAA 59.119 50.000 0.00 0.00 0.00 3.53
2283 2360 1.401539 GCCTGCGATTTCTGTTCCAAC 60.402 52.381 0.00 0.00 0.00 3.77
2284 2361 1.879380 CCTGCGATTTCTGTTCCAACA 59.121 47.619 0.00 0.00 37.37 3.33
2285 2362 2.293122 CCTGCGATTTCTGTTCCAACAA 59.707 45.455 0.00 0.00 38.66 2.83
2286 2363 3.057315 CCTGCGATTTCTGTTCCAACAAT 60.057 43.478 0.00 0.00 38.66 2.71
2287 2364 3.899734 TGCGATTTCTGTTCCAACAATG 58.100 40.909 0.00 0.00 38.66 2.82
2296 2373 3.291611 CCAACAATGGCAGGAGGC 58.708 61.111 0.00 0.00 40.58 4.70
2325 2402 2.125391 GAGACATGGCGCTGCAGA 60.125 61.111 20.43 0.00 0.00 4.26
2360 2437 1.227380 GCTAGAGGCATCCACCACG 60.227 63.158 0.00 0.00 41.35 4.94
2385 2462 5.958955 AGAAGTTGATAAAATGCTTGAGGC 58.041 37.500 0.00 0.00 42.22 4.70
2394 2471 5.391312 AAAATGCTTGAGGCGAGTAAAAT 57.609 34.783 0.00 0.00 45.43 1.82
2406 2483 4.506654 GGCGAGTAAAATCGAAAGCTCATA 59.493 41.667 3.74 0.00 45.56 2.15
2417 2494 6.408858 TCGAAAGCTCATACAAACTTGATC 57.591 37.500 0.00 0.00 0.00 2.92
2423 2500 7.551035 AGCTCATACAAACTTGATCTGAATC 57.449 36.000 0.00 0.00 0.00 2.52
2432 2509 8.778358 ACAAACTTGATCTGAATCTTAACAGAC 58.222 33.333 0.00 0.00 44.18 3.51
2433 2510 8.777413 CAAACTTGATCTGAATCTTAACAGACA 58.223 33.333 0.00 0.00 44.18 3.41
2434 2511 7.897575 ACTTGATCTGAATCTTAACAGACAC 57.102 36.000 0.00 0.00 44.18 3.67
2791 2869 0.745845 CCGTCTGAATCAAGGCCTGG 60.746 60.000 5.69 1.80 0.00 4.45
3237 3360 7.100409 AGTAACTGAAGAGGAGAATTAGTTGC 58.900 38.462 0.00 0.00 32.09 4.17
3360 3483 3.316868 GTGTCTACTATGACTGAGGGAGC 59.683 52.174 0.00 0.00 37.79 4.70
3415 3538 4.019591 GGTGTTCTGGAGGTTATGGTAACT 60.020 45.833 0.51 0.00 37.61 2.24
3417 3540 4.019681 TGTTCTGGAGGTTATGGTAACTGG 60.020 45.833 0.51 0.00 37.61 4.00
3422 3545 3.372675 GGAGGTTATGGTAACTGGCCATT 60.373 47.826 5.51 0.00 43.65 3.16
3427 3550 5.046950 GGTTATGGTAACTGGCCATTGAAAA 60.047 40.000 5.51 0.00 43.65 2.29
3467 3590 6.257630 ACGAAGTTTGTGCAAATTTAGCAAAT 59.742 30.769 14.21 3.33 40.91 2.32
3475 3600 7.782242 TGTGCAAATTTAGCAAATTTTACTCG 58.218 30.769 14.21 6.81 46.01 4.18
3484 3609 8.905103 TTAGCAAATTTTACTCGGATTTAAGC 57.095 30.769 0.00 0.00 0.00 3.09
3494 3619 3.666274 TCGGATTTAAGCGACTTCCAAA 58.334 40.909 0.00 0.00 0.00 3.28
3508 3633 7.382218 AGCGACTTCCAAATTTTGTTTGAATAG 59.618 33.333 8.26 0.00 0.00 1.73
3513 3638 8.443953 TTCCAAATTTTGTTTGAATAGTTGGG 57.556 30.769 8.26 0.00 34.94 4.12
3514 3639 7.569240 TCCAAATTTTGTTTGAATAGTTGGGT 58.431 30.769 8.26 0.00 34.94 4.51
3516 3641 7.255070 CCAAATTTTGTTTGAATAGTTGGGTGG 60.255 37.037 8.26 0.00 31.39 4.61
3517 3642 5.941555 TTTTGTTTGAATAGTTGGGTGGT 57.058 34.783 0.00 0.00 0.00 4.16
3518 3643 7.604657 ATTTTGTTTGAATAGTTGGGTGGTA 57.395 32.000 0.00 0.00 0.00 3.25
3545 3670 4.029809 GCGGTAACTGGTGCCCCT 62.030 66.667 0.00 0.00 0.00 4.79
3559 3684 2.623416 GTGCCCCTGTATATTTTCTGCC 59.377 50.000 0.00 0.00 0.00 4.85
3560 3685 2.239400 GCCCCTGTATATTTTCTGCCC 58.761 52.381 0.00 0.00 0.00 5.36
3561 3686 2.158460 GCCCCTGTATATTTTCTGCCCT 60.158 50.000 0.00 0.00 0.00 5.19
3562 3687 3.691311 GCCCCTGTATATTTTCTGCCCTT 60.691 47.826 0.00 0.00 0.00 3.95
3563 3688 4.145052 CCCCTGTATATTTTCTGCCCTTC 58.855 47.826 0.00 0.00 0.00 3.46
3564 3689 4.145052 CCCTGTATATTTTCTGCCCTTCC 58.855 47.826 0.00 0.00 0.00 3.46
3565 3690 3.815401 CCTGTATATTTTCTGCCCTTCCG 59.185 47.826 0.00 0.00 0.00 4.30
3566 3691 3.815401 CTGTATATTTTCTGCCCTTCCGG 59.185 47.826 0.00 0.00 0.00 5.14
3673 3798 5.930837 AACCCTGTGACATGAAAAAGAAA 57.069 34.783 0.00 0.00 0.00 2.52
3697 3822 5.713389 AGATCTGAAATGTGAAGCCAATCAA 59.287 36.000 0.00 0.00 0.00 2.57
3761 3917 8.170730 ACTTCTTTGTATAACTCCCAGGAAATT 58.829 33.333 0.00 0.00 0.00 1.82
3779 3935 7.543520 CAGGAAATTCCAAGAAAAGTATGAAGC 59.456 37.037 15.21 0.00 39.61 3.86
3862 4019 6.808008 ATCAATTAATCCCTATGCAGTTCG 57.192 37.500 0.00 0.00 0.00 3.95
3874 4031 1.616865 TGCAGTTCGGTGTTAGCTAGT 59.383 47.619 0.00 0.00 0.00 2.57
3965 4122 0.676466 CATTGTAAGCGAGGGGTGCA 60.676 55.000 0.00 0.00 33.85 4.57
4010 4167 5.117592 GCTCAACAACTGCACATAAATGTTC 59.882 40.000 0.00 0.00 39.39 3.18
4203 4360 6.295719 AGACCTCAATTTATCGTACCAAGT 57.704 37.500 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.586421 TCCCTGCTTCATCTCTACATACTG 59.414 45.833 0.00 0.00 0.00 2.74
1 2 4.809193 TCCCTGCTTCATCTCTACATACT 58.191 43.478 0.00 0.00 0.00 2.12
2 3 5.069781 AGTTCCCTGCTTCATCTCTACATAC 59.930 44.000 0.00 0.00 0.00 2.39
3 4 5.211973 AGTTCCCTGCTTCATCTCTACATA 58.788 41.667 0.00 0.00 0.00 2.29
4 5 4.036518 AGTTCCCTGCTTCATCTCTACAT 58.963 43.478 0.00 0.00 0.00 2.29
5 6 3.445008 AGTTCCCTGCTTCATCTCTACA 58.555 45.455 0.00 0.00 0.00 2.74
6 7 5.538433 AGATAGTTCCCTGCTTCATCTCTAC 59.462 44.000 0.00 0.00 0.00 2.59
7 8 5.710646 AGATAGTTCCCTGCTTCATCTCTA 58.289 41.667 0.00 0.00 0.00 2.43
8 9 4.555689 AGATAGTTCCCTGCTTCATCTCT 58.444 43.478 0.00 0.00 0.00 3.10
9 10 4.953940 AGATAGTTCCCTGCTTCATCTC 57.046 45.455 0.00 0.00 0.00 2.75
10 11 4.141528 CCAAGATAGTTCCCTGCTTCATCT 60.142 45.833 0.00 0.00 0.00 2.90
11 12 4.133078 CCAAGATAGTTCCCTGCTTCATC 58.867 47.826 0.00 0.00 0.00 2.92
12 13 3.117738 CCCAAGATAGTTCCCTGCTTCAT 60.118 47.826 0.00 0.00 0.00 2.57
13 14 2.239654 CCCAAGATAGTTCCCTGCTTCA 59.760 50.000 0.00 0.00 0.00 3.02
14 15 2.422093 CCCCAAGATAGTTCCCTGCTTC 60.422 54.545 0.00 0.00 0.00 3.86
15 16 1.566231 CCCCAAGATAGTTCCCTGCTT 59.434 52.381 0.00 0.00 0.00 3.91
16 17 1.216990 CCCCAAGATAGTTCCCTGCT 58.783 55.000 0.00 0.00 0.00 4.24
17 18 0.466372 GCCCCAAGATAGTTCCCTGC 60.466 60.000 0.00 0.00 0.00 4.85
18 19 0.183731 GGCCCCAAGATAGTTCCCTG 59.816 60.000 0.00 0.00 0.00 4.45
19 20 0.046397 AGGCCCCAAGATAGTTCCCT 59.954 55.000 0.00 0.00 0.00 4.20
20 21 0.474614 GAGGCCCCAAGATAGTTCCC 59.525 60.000 0.00 0.00 0.00 3.97
21 22 1.141858 CTGAGGCCCCAAGATAGTTCC 59.858 57.143 0.00 0.00 0.00 3.62
22 23 1.475930 GCTGAGGCCCCAAGATAGTTC 60.476 57.143 0.00 0.00 0.00 3.01
23 24 0.548510 GCTGAGGCCCCAAGATAGTT 59.451 55.000 0.00 0.00 0.00 2.24
24 25 0.327000 AGCTGAGGCCCCAAGATAGT 60.327 55.000 0.00 0.00 39.73 2.12
25 26 0.842635 AAGCTGAGGCCCCAAGATAG 59.157 55.000 0.00 0.00 39.73 2.08
26 27 1.064463 CAAAGCTGAGGCCCCAAGATA 60.064 52.381 0.00 0.00 39.73 1.98
27 28 0.324091 CAAAGCTGAGGCCCCAAGAT 60.324 55.000 0.00 0.00 39.73 2.40
28 29 1.075482 CAAAGCTGAGGCCCCAAGA 59.925 57.895 0.00 0.00 39.73 3.02
29 30 1.980772 CCAAAGCTGAGGCCCCAAG 60.981 63.158 0.00 0.00 39.73 3.61
30 31 2.118076 CCAAAGCTGAGGCCCCAA 59.882 61.111 0.00 0.00 39.73 4.12
31 32 1.431195 TAACCAAAGCTGAGGCCCCA 61.431 55.000 0.00 0.00 39.73 4.96
32 33 0.033109 ATAACCAAAGCTGAGGCCCC 60.033 55.000 0.00 0.00 39.73 5.80
33 34 1.478105 CAATAACCAAAGCTGAGGCCC 59.522 52.381 0.00 0.00 39.73 5.80
34 35 2.424956 CTCAATAACCAAAGCTGAGGCC 59.575 50.000 0.00 0.00 39.73 5.19
35 36 2.424956 CCTCAATAACCAAAGCTGAGGC 59.575 50.000 3.62 0.00 44.88 4.70
37 38 3.441572 CACCCTCAATAACCAAAGCTGAG 59.558 47.826 0.00 0.00 34.55 3.35
38 39 3.181434 ACACCCTCAATAACCAAAGCTGA 60.181 43.478 0.00 0.00 0.00 4.26
39 40 3.157087 ACACCCTCAATAACCAAAGCTG 58.843 45.455 0.00 0.00 0.00 4.24
40 41 3.181434 TGACACCCTCAATAACCAAAGCT 60.181 43.478 0.00 0.00 0.00 3.74
41 42 3.057526 GTGACACCCTCAATAACCAAAGC 60.058 47.826 0.00 0.00 0.00 3.51
42 43 3.188460 CGTGACACCCTCAATAACCAAAG 59.812 47.826 0.00 0.00 0.00 2.77
43 44 3.142951 CGTGACACCCTCAATAACCAAA 58.857 45.455 0.00 0.00 0.00 3.28
44 45 2.551287 CCGTGACACCCTCAATAACCAA 60.551 50.000 0.00 0.00 0.00 3.67
45 46 1.002659 CCGTGACACCCTCAATAACCA 59.997 52.381 0.00 0.00 0.00 3.67
46 47 1.276989 TCCGTGACACCCTCAATAACC 59.723 52.381 0.00 0.00 0.00 2.85
47 48 2.344025 GTCCGTGACACCCTCAATAAC 58.656 52.381 0.00 0.00 32.09 1.89
48 49 1.276989 GGTCCGTGACACCCTCAATAA 59.723 52.381 0.00 0.00 33.68 1.40
49 50 0.899720 GGTCCGTGACACCCTCAATA 59.100 55.000 0.00 0.00 33.68 1.90
50 51 1.677552 GGTCCGTGACACCCTCAAT 59.322 57.895 0.00 0.00 33.68 2.57
51 52 3.144285 GGTCCGTGACACCCTCAA 58.856 61.111 0.00 0.00 33.68 3.02
57 58 4.295119 ACGCTGGGTCCGTGACAC 62.295 66.667 0.00 0.00 37.56 3.67
58 59 3.986006 GACGCTGGGTCCGTGACA 61.986 66.667 13.36 0.00 39.90 3.58
59 60 3.986006 TGACGCTGGGTCCGTGAC 61.986 66.667 20.32 0.00 45.46 3.67
60 61 3.986006 GTGACGCTGGGTCCGTGA 61.986 66.667 20.32 0.75 45.46 4.35
61 62 3.991051 AGTGACGCTGGGTCCGTG 61.991 66.667 20.32 0.00 45.46 4.94
62 63 3.991051 CAGTGACGCTGGGTCCGT 61.991 66.667 20.32 6.35 45.46 4.69
69 70 1.956170 AACGCTTCCAGTGACGCTG 60.956 57.895 9.13 9.13 44.63 5.18
70 71 1.956170 CAACGCTTCCAGTGACGCT 60.956 57.895 0.00 0.00 33.81 5.07
71 72 2.551270 CAACGCTTCCAGTGACGC 59.449 61.111 0.00 0.00 32.69 5.19
72 73 2.954753 GCCAACGCTTCCAGTGACG 61.955 63.158 0.00 0.00 0.00 4.35
73 74 1.237285 ATGCCAACGCTTCCAGTGAC 61.237 55.000 0.00 0.00 35.36 3.67
74 75 1.073025 ATGCCAACGCTTCCAGTGA 59.927 52.632 0.00 0.00 35.36 3.41
75 76 1.210931 CATGCCAACGCTTCCAGTG 59.789 57.895 0.00 0.00 35.36 3.66
76 77 2.629656 GCATGCCAACGCTTCCAGT 61.630 57.895 6.36 0.00 35.36 4.00
77 78 2.180017 GCATGCCAACGCTTCCAG 59.820 61.111 6.36 0.00 35.36 3.86
78 79 3.372730 GGCATGCCAACGCTTCCA 61.373 61.111 32.08 0.00 35.36 3.53
79 80 4.481112 CGGCATGCCAACGCTTCC 62.481 66.667 34.93 6.13 35.37 3.46
103 104 4.704833 TCCTCCGCCAAGCACAGC 62.705 66.667 0.00 0.00 0.00 4.40
104 105 2.738213 AAGTCCTCCGCCAAGCACAG 62.738 60.000 0.00 0.00 0.00 3.66
105 106 2.818169 AAGTCCTCCGCCAAGCACA 61.818 57.895 0.00 0.00 0.00 4.57
106 107 2.032681 AAGTCCTCCGCCAAGCAC 59.967 61.111 0.00 0.00 0.00 4.40
107 108 2.032528 CAAGTCCTCCGCCAAGCA 59.967 61.111 0.00 0.00 0.00 3.91
108 109 0.678048 ATTCAAGTCCTCCGCCAAGC 60.678 55.000 0.00 0.00 0.00 4.01
109 110 2.691409 TATTCAAGTCCTCCGCCAAG 57.309 50.000 0.00 0.00 0.00 3.61
110 111 2.158813 GGATATTCAAGTCCTCCGCCAA 60.159 50.000 0.00 0.00 0.00 4.52
111 112 1.416401 GGATATTCAAGTCCTCCGCCA 59.584 52.381 0.00 0.00 0.00 5.69
112 113 1.416401 TGGATATTCAAGTCCTCCGCC 59.584 52.381 0.00 0.00 35.49 6.13
113 114 2.910688 TGGATATTCAAGTCCTCCGC 57.089 50.000 0.00 0.00 35.49 5.54
114 115 4.770795 ACTTTGGATATTCAAGTCCTCCG 58.229 43.478 0.00 0.00 35.49 4.63
115 116 7.468141 AAAACTTTGGATATTCAAGTCCTCC 57.532 36.000 0.00 0.00 35.49 4.30
128 129 9.807649 GTCTGATGCAATAATAAAACTTTGGAT 57.192 29.630 0.00 0.00 33.57 3.41
129 130 9.023962 AGTCTGATGCAATAATAAAACTTTGGA 57.976 29.630 0.00 0.00 0.00 3.53
130 131 9.079833 CAGTCTGATGCAATAATAAAACTTTGG 57.920 33.333 0.00 0.00 0.00 3.28
131 132 8.589629 GCAGTCTGATGCAATAATAAAACTTTG 58.410 33.333 3.32 0.00 45.77 2.77
132 133 8.693542 GCAGTCTGATGCAATAATAAAACTTT 57.306 30.769 3.32 0.00 45.77 2.66
146 147 1.242076 ACCTGTTTGCAGTCTGATGC 58.758 50.000 3.32 5.49 46.68 3.91
147 148 3.434641 CACTACCTGTTTGCAGTCTGATG 59.565 47.826 3.32 0.00 41.02 3.07
148 149 3.557898 CCACTACCTGTTTGCAGTCTGAT 60.558 47.826 3.32 0.00 41.02 2.90
149 150 2.224281 CCACTACCTGTTTGCAGTCTGA 60.224 50.000 3.32 0.00 41.02 3.27
150 151 2.146342 CCACTACCTGTTTGCAGTCTG 58.854 52.381 0.00 0.00 41.02 3.51
151 152 1.543429 GCCACTACCTGTTTGCAGTCT 60.543 52.381 0.00 0.00 41.02 3.24
152 153 0.875059 GCCACTACCTGTTTGCAGTC 59.125 55.000 0.00 0.00 41.02 3.51
153 154 0.182537 TGCCACTACCTGTTTGCAGT 59.817 50.000 0.00 0.00 41.02 4.40
154 155 0.877071 CTGCCACTACCTGTTTGCAG 59.123 55.000 0.00 0.00 42.05 4.41
155 156 0.472044 TCTGCCACTACCTGTTTGCA 59.528 50.000 0.00 0.00 34.14 4.08
156 157 1.826385 ATCTGCCACTACCTGTTTGC 58.174 50.000 0.00 0.00 0.00 3.68
157 158 4.336433 CCAATATCTGCCACTACCTGTTTG 59.664 45.833 0.00 0.00 0.00 2.93
158 159 4.018415 ACCAATATCTGCCACTACCTGTTT 60.018 41.667 0.00 0.00 0.00 2.83
159 160 3.523564 ACCAATATCTGCCACTACCTGTT 59.476 43.478 0.00 0.00 0.00 3.16
160 161 3.115390 ACCAATATCTGCCACTACCTGT 58.885 45.455 0.00 0.00 0.00 4.00
161 162 3.733337 GACCAATATCTGCCACTACCTG 58.267 50.000 0.00 0.00 0.00 4.00
162 163 2.365617 CGACCAATATCTGCCACTACCT 59.634 50.000 0.00 0.00 0.00 3.08
163 164 2.364324 TCGACCAATATCTGCCACTACC 59.636 50.000 0.00 0.00 0.00 3.18
164 165 3.728076 TCGACCAATATCTGCCACTAC 57.272 47.619 0.00 0.00 0.00 2.73
165 166 3.492656 GCTTCGACCAATATCTGCCACTA 60.493 47.826 0.00 0.00 0.00 2.74
166 167 2.743183 GCTTCGACCAATATCTGCCACT 60.743 50.000 0.00 0.00 0.00 4.00
167 168 1.599542 GCTTCGACCAATATCTGCCAC 59.400 52.381 0.00 0.00 0.00 5.01
168 169 1.806247 CGCTTCGACCAATATCTGCCA 60.806 52.381 0.00 0.00 0.00 4.92
169 170 0.861837 CGCTTCGACCAATATCTGCC 59.138 55.000 0.00 0.00 0.00 4.85
170 171 0.233332 GCGCTTCGACCAATATCTGC 59.767 55.000 0.00 0.00 0.00 4.26
171 172 1.858091 AGCGCTTCGACCAATATCTG 58.142 50.000 2.64 0.00 0.00 2.90
172 173 2.885266 TCTAGCGCTTCGACCAATATCT 59.115 45.455 18.68 0.00 0.00 1.98
173 174 3.238441 CTCTAGCGCTTCGACCAATATC 58.762 50.000 18.68 0.00 0.00 1.63
174 175 2.029828 CCTCTAGCGCTTCGACCAATAT 60.030 50.000 18.68 0.00 0.00 1.28
175 176 1.337071 CCTCTAGCGCTTCGACCAATA 59.663 52.381 18.68 0.00 0.00 1.90
176 177 0.103208 CCTCTAGCGCTTCGACCAAT 59.897 55.000 18.68 0.00 0.00 3.16
177 178 1.511305 CCTCTAGCGCTTCGACCAA 59.489 57.895 18.68 0.00 0.00 3.67
178 179 2.415608 CCCTCTAGCGCTTCGACCA 61.416 63.158 18.68 0.00 0.00 4.02
179 180 2.065906 CTCCCTCTAGCGCTTCGACC 62.066 65.000 18.68 0.00 0.00 4.79
180 181 1.096386 TCTCCCTCTAGCGCTTCGAC 61.096 60.000 18.68 0.00 0.00 4.20
181 182 0.179015 ATCTCCCTCTAGCGCTTCGA 60.179 55.000 18.68 12.31 0.00 3.71
182 183 1.524848 TATCTCCCTCTAGCGCTTCG 58.475 55.000 18.68 7.78 0.00 3.79
183 184 2.165437 CCATATCTCCCTCTAGCGCTTC 59.835 54.545 18.68 0.00 0.00 3.86
184 185 2.175202 CCATATCTCCCTCTAGCGCTT 58.825 52.381 18.68 0.00 0.00 4.68
185 186 1.356059 TCCATATCTCCCTCTAGCGCT 59.644 52.381 17.26 17.26 0.00 5.92
186 187 1.748493 CTCCATATCTCCCTCTAGCGC 59.252 57.143 0.00 0.00 0.00 5.92
187 188 1.748493 GCTCCATATCTCCCTCTAGCG 59.252 57.143 0.00 0.00 0.00 4.26
188 189 1.748493 CGCTCCATATCTCCCTCTAGC 59.252 57.143 0.00 0.00 0.00 3.42
189 190 3.358111 TCGCTCCATATCTCCCTCTAG 57.642 52.381 0.00 0.00 0.00 2.43
190 191 5.452341 TTATCGCTCCATATCTCCCTCTA 57.548 43.478 0.00 0.00 0.00 2.43
191 192 2.917713 ATCGCTCCATATCTCCCTCT 57.082 50.000 0.00 0.00 0.00 3.69
192 193 4.646945 TGATTATCGCTCCATATCTCCCTC 59.353 45.833 0.00 0.00 0.00 4.30
193 194 4.614475 TGATTATCGCTCCATATCTCCCT 58.386 43.478 0.00 0.00 0.00 4.20
194 195 4.739137 GCTGATTATCGCTCCATATCTCCC 60.739 50.000 2.75 0.00 0.00 4.30
195 196 4.367450 GCTGATTATCGCTCCATATCTCC 58.633 47.826 2.75 0.00 0.00 3.71
196 197 4.041049 CGCTGATTATCGCTCCATATCTC 58.959 47.826 7.25 0.00 0.00 2.75
197 198 3.696548 TCGCTGATTATCGCTCCATATCT 59.303 43.478 7.25 0.00 0.00 1.98
198 199 4.033990 TCGCTGATTATCGCTCCATATC 57.966 45.455 7.25 0.00 0.00 1.63
199 200 3.696548 TCTCGCTGATTATCGCTCCATAT 59.303 43.478 7.25 0.00 0.00 1.78
200 201 3.081804 TCTCGCTGATTATCGCTCCATA 58.918 45.455 7.25 0.00 0.00 2.74
201 202 1.889170 TCTCGCTGATTATCGCTCCAT 59.111 47.619 7.25 0.00 0.00 3.41
202 203 1.318576 TCTCGCTGATTATCGCTCCA 58.681 50.000 7.25 0.00 0.00 3.86
203 204 2.095008 TGATCTCGCTGATTATCGCTCC 60.095 50.000 0.00 0.00 35.14 4.70
204 205 3.208915 TGATCTCGCTGATTATCGCTC 57.791 47.619 0.00 0.69 35.14 5.03
205 206 3.312828 GTTGATCTCGCTGATTATCGCT 58.687 45.455 0.00 0.00 35.14 4.93
206 207 2.410053 GGTTGATCTCGCTGATTATCGC 59.590 50.000 0.00 0.36 35.14 4.58
207 208 3.906998 AGGTTGATCTCGCTGATTATCG 58.093 45.455 0.00 0.00 35.14 2.92
208 209 4.876125 TGAGGTTGATCTCGCTGATTATC 58.124 43.478 0.00 0.00 36.61 1.75
209 210 4.944619 TGAGGTTGATCTCGCTGATTAT 57.055 40.909 0.00 0.00 36.61 1.28
210 211 4.736126 TTGAGGTTGATCTCGCTGATTA 57.264 40.909 0.00 0.00 36.61 1.75
211 212 3.616956 TTGAGGTTGATCTCGCTGATT 57.383 42.857 0.00 0.00 36.61 2.57
212 213 3.529533 CTTTGAGGTTGATCTCGCTGAT 58.470 45.455 0.00 0.00 36.61 2.90
213 214 2.932622 GCTTTGAGGTTGATCTCGCTGA 60.933 50.000 0.00 0.00 36.61 4.26
214 215 1.396301 GCTTTGAGGTTGATCTCGCTG 59.604 52.381 0.00 0.00 36.61 5.18
215 216 1.277557 AGCTTTGAGGTTGATCTCGCT 59.722 47.619 0.00 0.00 36.61 4.93
216 217 1.396301 CAGCTTTGAGGTTGATCTCGC 59.604 52.381 0.00 0.00 36.61 5.03
217 218 1.396301 GCAGCTTTGAGGTTGATCTCG 59.604 52.381 0.00 0.00 36.61 4.04
218 219 1.742268 GGCAGCTTTGAGGTTGATCTC 59.258 52.381 0.00 0.00 0.00 2.75
219 220 1.074405 TGGCAGCTTTGAGGTTGATCT 59.926 47.619 0.00 0.00 0.00 2.75
220 221 1.200948 GTGGCAGCTTTGAGGTTGATC 59.799 52.381 0.00 0.00 0.00 2.92
221 222 1.202976 AGTGGCAGCTTTGAGGTTGAT 60.203 47.619 0.00 0.00 0.00 2.57
222 223 0.183492 AGTGGCAGCTTTGAGGTTGA 59.817 50.000 0.00 0.00 0.00 3.18
223 224 0.313043 CAGTGGCAGCTTTGAGGTTG 59.687 55.000 0.00 0.00 0.00 3.77
224 225 0.106519 ACAGTGGCAGCTTTGAGGTT 60.107 50.000 0.00 0.00 0.00 3.50
225 226 0.106519 AACAGTGGCAGCTTTGAGGT 60.107 50.000 0.00 0.00 0.00 3.85
226 227 0.595095 GAACAGTGGCAGCTTTGAGG 59.405 55.000 0.00 0.00 0.00 3.86
227 228 1.311859 TGAACAGTGGCAGCTTTGAG 58.688 50.000 0.00 0.00 0.00 3.02
228 229 1.761449 TTGAACAGTGGCAGCTTTGA 58.239 45.000 0.00 0.00 0.00 2.69
229 230 2.223876 ACATTGAACAGTGGCAGCTTTG 60.224 45.455 0.00 0.00 0.00 2.77
230 231 2.034124 ACATTGAACAGTGGCAGCTTT 58.966 42.857 0.00 0.00 0.00 3.51
231 232 1.696063 ACATTGAACAGTGGCAGCTT 58.304 45.000 0.00 0.00 0.00 3.74
232 233 2.566833 TACATTGAACAGTGGCAGCT 57.433 45.000 0.00 0.00 0.00 4.24
233 234 3.641437 TTTACATTGAACAGTGGCAGC 57.359 42.857 0.00 0.00 0.00 5.25
234 235 7.370383 AGTAAATTTACATTGAACAGTGGCAG 58.630 34.615 26.06 0.00 36.12 4.85
235 236 7.283625 AGTAAATTTACATTGAACAGTGGCA 57.716 32.000 26.06 0.00 36.12 4.92
236 237 8.587952 AAAGTAAATTTACATTGAACAGTGGC 57.412 30.769 26.06 0.00 36.12 5.01
244 245 9.658475 CGACACTCAAAAGTAAATTTACATTGA 57.342 29.630 28.78 28.78 38.37 2.57
245 246 9.445786 ACGACACTCAAAAGTAAATTTACATTG 57.554 29.630 26.06 25.85 36.12 2.82
246 247 9.445786 CACGACACTCAAAAGTAAATTTACATT 57.554 29.630 26.06 19.18 36.12 2.71
247 248 7.589954 GCACGACACTCAAAAGTAAATTTACAT 59.410 33.333 26.06 14.63 36.12 2.29
248 249 6.908284 GCACGACACTCAAAAGTAAATTTACA 59.092 34.615 26.06 7.89 36.12 2.41
249 250 6.908284 TGCACGACACTCAAAAGTAAATTTAC 59.092 34.615 18.77 18.77 33.25 2.01
250 251 7.017498 TGCACGACACTCAAAAGTAAATTTA 57.983 32.000 0.00 0.00 33.25 1.40
251 252 5.885881 TGCACGACACTCAAAAGTAAATTT 58.114 33.333 0.00 0.00 33.25 1.82
252 253 5.493133 TGCACGACACTCAAAAGTAAATT 57.507 34.783 0.00 0.00 33.25 1.82
253 254 5.493133 TTGCACGACACTCAAAAGTAAAT 57.507 34.783 0.00 0.00 33.25 1.40
254 255 4.729458 GCTTGCACGACACTCAAAAGTAAA 60.729 41.667 0.00 0.00 33.25 2.01
255 256 3.242608 GCTTGCACGACACTCAAAAGTAA 60.243 43.478 0.00 0.00 33.25 2.24
256 257 2.286833 GCTTGCACGACACTCAAAAGTA 59.713 45.455 0.00 0.00 33.25 2.24
257 258 1.064060 GCTTGCACGACACTCAAAAGT 59.936 47.619 0.00 0.00 35.60 2.66
258 259 1.063912 TGCTTGCACGACACTCAAAAG 59.936 47.619 0.00 0.00 0.00 2.27
259 260 1.090728 TGCTTGCACGACACTCAAAA 58.909 45.000 0.00 0.00 0.00 2.44
260 261 0.376852 GTGCTTGCACGACACTCAAA 59.623 50.000 10.06 0.00 0.00 2.69
261 262 0.742635 TGTGCTTGCACGACACTCAA 60.743 50.000 18.99 0.00 35.33 3.02
262 263 0.532640 ATGTGCTTGCACGACACTCA 60.533 50.000 18.99 2.24 35.33 3.41
263 264 1.391485 CTATGTGCTTGCACGACACTC 59.609 52.381 18.99 0.00 35.33 3.51
264 265 1.270305 ACTATGTGCTTGCACGACACT 60.270 47.619 18.99 5.77 35.33 3.55
265 266 1.148310 ACTATGTGCTTGCACGACAC 58.852 50.000 18.99 9.68 34.86 3.67
266 267 1.877637 AACTATGTGCTTGCACGACA 58.122 45.000 18.99 4.29 0.00 4.35
267 268 2.969443 AAACTATGTGCTTGCACGAC 57.031 45.000 18.99 0.00 0.00 4.34
268 269 2.415168 GCTAAACTATGTGCTTGCACGA 59.585 45.455 18.99 9.91 0.00 4.35
269 270 2.159430 TGCTAAACTATGTGCTTGCACG 59.841 45.455 18.99 8.95 0.00 5.34
270 271 3.829886 TGCTAAACTATGTGCTTGCAC 57.170 42.857 17.73 17.73 0.00 4.57
271 272 4.844998 TTTGCTAAACTATGTGCTTGCA 57.155 36.364 0.00 0.00 0.00 4.08
272 273 6.710692 AATTTTGCTAAACTATGTGCTTGC 57.289 33.333 0.00 0.00 0.00 4.01
273 274 8.763356 TGAAAATTTTGCTAAACTATGTGCTTG 58.237 29.630 8.47 0.00 0.00 4.01
274 275 8.764287 GTGAAAATTTTGCTAAACTATGTGCTT 58.236 29.630 8.47 0.00 0.00 3.91
275 276 8.143835 AGTGAAAATTTTGCTAAACTATGTGCT 58.856 29.630 8.47 0.00 0.00 4.40
276 277 8.298030 AGTGAAAATTTTGCTAAACTATGTGC 57.702 30.769 8.47 0.00 0.00 4.57
284 285 9.965824 CCTCTAGAAAGTGAAAATTTTGCTAAA 57.034 29.630 8.47 0.00 32.38 1.85
285 286 9.131791 ACCTCTAGAAAGTGAAAATTTTGCTAA 57.868 29.630 8.47 0.00 32.38 3.09
286 287 8.691661 ACCTCTAGAAAGTGAAAATTTTGCTA 57.308 30.769 8.47 0.00 32.38 3.49
287 288 7.255625 GGACCTCTAGAAAGTGAAAATTTTGCT 60.256 37.037 8.47 3.57 32.38 3.91
288 289 6.863645 GGACCTCTAGAAAGTGAAAATTTTGC 59.136 38.462 8.47 1.14 32.38 3.68
289 290 8.078596 CAGGACCTCTAGAAAGTGAAAATTTTG 58.921 37.037 8.47 0.00 32.38 2.44
290 291 7.231519 CCAGGACCTCTAGAAAGTGAAAATTTT 59.768 37.037 2.28 2.28 32.38 1.82
291 292 6.717084 CCAGGACCTCTAGAAAGTGAAAATTT 59.283 38.462 0.00 0.00 36.50 1.82
292 293 6.183361 ACCAGGACCTCTAGAAAGTGAAAATT 60.183 38.462 0.00 0.00 0.00 1.82
293 294 5.310857 ACCAGGACCTCTAGAAAGTGAAAAT 59.689 40.000 0.00 0.00 0.00 1.82
294 295 4.658901 ACCAGGACCTCTAGAAAGTGAAAA 59.341 41.667 0.00 0.00 0.00 2.29
295 296 4.232091 ACCAGGACCTCTAGAAAGTGAAA 58.768 43.478 0.00 0.00 0.00 2.69
296 297 3.833070 GACCAGGACCTCTAGAAAGTGAA 59.167 47.826 0.00 0.00 0.00 3.18
297 298 3.076182 AGACCAGGACCTCTAGAAAGTGA 59.924 47.826 0.00 0.00 0.00 3.41
298 299 3.436243 AGACCAGGACCTCTAGAAAGTG 58.564 50.000 0.00 0.00 0.00 3.16
299 300 3.564790 GGAGACCAGGACCTCTAGAAAGT 60.565 52.174 11.60 0.00 0.00 2.66
300 301 3.028130 GGAGACCAGGACCTCTAGAAAG 58.972 54.545 11.60 0.00 0.00 2.62
301 302 2.382305 TGGAGACCAGGACCTCTAGAAA 59.618 50.000 11.60 0.00 0.00 2.52
302 303 2.000803 TGGAGACCAGGACCTCTAGAA 58.999 52.381 11.60 0.00 0.00 2.10
303 304 1.285373 GTGGAGACCAGGACCTCTAGA 59.715 57.143 11.60 0.00 32.34 2.43
304 305 1.770294 GTGGAGACCAGGACCTCTAG 58.230 60.000 11.60 0.00 32.34 2.43
305 306 0.034380 CGTGGAGACCAGGACCTCTA 60.034 60.000 11.60 5.05 41.36 2.43
306 307 1.304547 CGTGGAGACCAGGACCTCT 60.305 63.158 11.60 0.00 41.36 3.69
307 308 1.596895 GACGTGGAGACCAGGACCTC 61.597 65.000 15.70 0.00 41.36 3.85
308 309 1.606889 GACGTGGAGACCAGGACCT 60.607 63.158 15.70 0.00 41.36 3.85
309 310 1.606889 AGACGTGGAGACCAGGACC 60.607 63.158 15.70 8.01 41.36 4.46
310 311 1.587054 CAGACGTGGAGACCAGGAC 59.413 63.158 15.70 10.29 41.36 3.85
311 312 4.097218 CAGACGTGGAGACCAGGA 57.903 61.111 15.70 0.00 41.36 3.86
321 322 1.278637 GAACGCCAAACCAGACGTG 59.721 57.895 0.00 0.00 39.00 4.49
322 323 1.890510 GGAACGCCAAACCAGACGT 60.891 57.895 0.00 0.00 41.16 4.34
323 324 1.164041 AAGGAACGCCAAACCAGACG 61.164 55.000 0.00 0.00 36.29 4.18
324 325 1.534163 GTAAGGAACGCCAAACCAGAC 59.466 52.381 0.00 0.00 36.29 3.51
325 326 1.141254 TGTAAGGAACGCCAAACCAGA 59.859 47.619 0.00 0.00 36.29 3.86
326 327 1.600023 TGTAAGGAACGCCAAACCAG 58.400 50.000 0.00 0.00 36.29 4.00
327 328 1.677052 GTTGTAAGGAACGCCAAACCA 59.323 47.619 0.00 0.00 36.29 3.67
328 329 1.001048 GGTTGTAAGGAACGCCAAACC 60.001 52.381 0.00 0.00 36.29 3.27
329 330 1.677052 TGGTTGTAAGGAACGCCAAAC 59.323 47.619 0.00 0.00 34.20 2.93
330 331 1.950909 CTGGTTGTAAGGAACGCCAAA 59.049 47.619 0.00 0.00 35.96 3.28
331 332 1.141254 TCTGGTTGTAAGGAACGCCAA 59.859 47.619 0.00 0.00 35.96 4.52
332 333 0.759959 TCTGGTTGTAAGGAACGCCA 59.240 50.000 0.00 0.00 35.36 5.69
333 334 1.534163 GTTCTGGTTGTAAGGAACGCC 59.466 52.381 0.00 0.00 0.00 5.68
334 335 1.534163 GGTTCTGGTTGTAAGGAACGC 59.466 52.381 0.00 0.00 38.94 4.84
335 336 1.796459 CGGTTCTGGTTGTAAGGAACG 59.204 52.381 0.00 0.00 38.94 3.95
336 337 2.842457 ACGGTTCTGGTTGTAAGGAAC 58.158 47.619 0.00 0.00 37.79 3.62
337 338 4.322953 GGATACGGTTCTGGTTGTAAGGAA 60.323 45.833 0.00 0.00 0.00 3.36
338 339 3.196254 GGATACGGTTCTGGTTGTAAGGA 59.804 47.826 0.00 0.00 0.00 3.36
339 340 3.528532 GGATACGGTTCTGGTTGTAAGG 58.471 50.000 0.00 0.00 0.00 2.69
340 341 3.055675 TGGGATACGGTTCTGGTTGTAAG 60.056 47.826 0.00 0.00 37.60 2.34
341 342 2.905085 TGGGATACGGTTCTGGTTGTAA 59.095 45.455 0.00 0.00 37.60 2.41
342 343 2.234414 GTGGGATACGGTTCTGGTTGTA 59.766 50.000 0.00 0.00 37.60 2.41
343 344 1.002773 GTGGGATACGGTTCTGGTTGT 59.997 52.381 0.00 0.00 37.60 3.32
344 345 1.278127 AGTGGGATACGGTTCTGGTTG 59.722 52.381 0.00 0.00 37.60 3.77
345 346 1.652947 AGTGGGATACGGTTCTGGTT 58.347 50.000 0.00 0.00 37.60 3.67
346 347 1.553704 GAAGTGGGATACGGTTCTGGT 59.446 52.381 0.00 0.00 37.60 4.00
347 348 1.553248 TGAAGTGGGATACGGTTCTGG 59.447 52.381 0.00 0.00 37.60 3.86
348 349 3.198068 CATGAAGTGGGATACGGTTCTG 58.802 50.000 0.00 0.00 37.60 3.02
349 350 2.838202 ACATGAAGTGGGATACGGTTCT 59.162 45.455 0.00 0.00 37.60 3.01
350 351 2.936498 CACATGAAGTGGGATACGGTTC 59.064 50.000 0.00 0.00 44.69 3.62
351 352 2.985896 CACATGAAGTGGGATACGGTT 58.014 47.619 0.00 0.00 44.69 4.44
352 353 2.691409 CACATGAAGTGGGATACGGT 57.309 50.000 0.00 0.00 44.69 4.83
362 363 5.733620 ATTCATCAAAAGCCACATGAAGT 57.266 34.783 0.00 0.00 38.36 3.01
363 364 7.816031 ACTTTATTCATCAAAAGCCACATGAAG 59.184 33.333 0.00 0.00 38.36 3.02
364 365 7.669427 ACTTTATTCATCAAAAGCCACATGAA 58.331 30.769 0.00 0.00 39.09 2.57
365 366 7.230849 ACTTTATTCATCAAAAGCCACATGA 57.769 32.000 0.00 0.00 36.39 3.07
366 367 7.599621 TCAACTTTATTCATCAAAAGCCACATG 59.400 33.333 0.00 0.00 36.39 3.21
367 368 7.669427 TCAACTTTATTCATCAAAAGCCACAT 58.331 30.769 0.00 0.00 36.39 3.21
368 369 7.048629 TCAACTTTATTCATCAAAAGCCACA 57.951 32.000 0.00 0.00 36.39 4.17
369 370 8.538409 AATCAACTTTATTCATCAAAAGCCAC 57.462 30.769 0.00 0.00 36.39 5.01
370 371 9.206870 GAAATCAACTTTATTCATCAAAAGCCA 57.793 29.630 0.00 0.00 36.39 4.75
371 372 9.206870 TGAAATCAACTTTATTCATCAAAAGCC 57.793 29.630 0.00 0.00 36.39 4.35
374 375 9.487790 GGGTGAAATCAACTTTATTCATCAAAA 57.512 29.630 0.00 0.00 35.18 2.44
375 376 8.093927 GGGGTGAAATCAACTTTATTCATCAAA 58.906 33.333 0.00 0.00 35.18 2.69
376 377 7.454380 AGGGGTGAAATCAACTTTATTCATCAA 59.546 33.333 0.00 0.00 35.18 2.57
377 378 6.953520 AGGGGTGAAATCAACTTTATTCATCA 59.046 34.615 0.00 0.00 35.18 3.07
378 379 7.122650 TGAGGGGTGAAATCAACTTTATTCATC 59.877 37.037 0.00 0.00 34.62 2.92
379 380 6.953520 TGAGGGGTGAAATCAACTTTATTCAT 59.046 34.615 0.00 0.00 34.62 2.57
380 381 6.310941 TGAGGGGTGAAATCAACTTTATTCA 58.689 36.000 0.00 0.00 33.16 2.57
381 382 6.834168 TGAGGGGTGAAATCAACTTTATTC 57.166 37.500 0.00 0.00 33.16 1.75
382 383 7.610580 TTTGAGGGGTGAAATCAACTTTATT 57.389 32.000 0.00 0.00 32.91 1.40
383 384 7.610580 TTTTGAGGGGTGAAATCAACTTTAT 57.389 32.000 0.00 0.00 32.91 1.40
384 385 7.425224 TTTTTGAGGGGTGAAATCAACTTTA 57.575 32.000 0.00 0.00 32.91 1.85
385 386 5.948742 TTTTGAGGGGTGAAATCAACTTT 57.051 34.783 0.00 0.00 32.91 2.66
386 387 5.948742 TTTTTGAGGGGTGAAATCAACTT 57.051 34.783 0.00 0.00 32.91 2.66
408 409 1.040339 TCGCTTGTGTGCCCCTTTTT 61.040 50.000 0.00 0.00 0.00 1.94
409 410 1.454847 TCGCTTGTGTGCCCCTTTT 60.455 52.632 0.00 0.00 0.00 2.27
410 411 1.898574 CTCGCTTGTGTGCCCCTTT 60.899 57.895 0.00 0.00 0.00 3.11
411 412 2.281761 CTCGCTTGTGTGCCCCTT 60.282 61.111 0.00 0.00 0.00 3.95
412 413 3.120086 AACTCGCTTGTGTGCCCCT 62.120 57.895 0.00 0.00 0.00 4.79
413 414 2.594592 AACTCGCTTGTGTGCCCC 60.595 61.111 0.00 0.00 0.00 5.80
414 415 2.117941 GACAACTCGCTTGTGTGCCC 62.118 60.000 3.32 0.00 43.60 5.36
415 416 1.279840 GACAACTCGCTTGTGTGCC 59.720 57.895 3.32 0.00 43.60 5.01
416 417 0.041839 CTGACAACTCGCTTGTGTGC 60.042 55.000 3.32 0.00 43.60 4.57
417 418 0.583438 CCTGACAACTCGCTTGTGTG 59.417 55.000 3.32 0.00 43.60 3.82
418 419 1.160329 GCCTGACAACTCGCTTGTGT 61.160 55.000 3.32 0.00 43.60 3.72
419 420 0.882042 AGCCTGACAACTCGCTTGTG 60.882 55.000 3.32 0.00 43.60 3.33
420 421 0.601311 GAGCCTGACAACTCGCTTGT 60.601 55.000 0.00 0.00 46.44 3.16
421 422 2.157421 GAGCCTGACAACTCGCTTG 58.843 57.895 0.00 0.00 35.77 4.01
422 423 4.683432 GAGCCTGACAACTCGCTT 57.317 55.556 0.00 0.00 0.00 4.68
426 427 0.037790 AGAAGCGAGCCTGACAACTC 60.038 55.000 0.00 0.00 0.00 3.01
427 428 1.203523 CTAGAAGCGAGCCTGACAACT 59.796 52.381 0.00 0.00 0.00 3.16
428 429 1.634702 CTAGAAGCGAGCCTGACAAC 58.365 55.000 0.00 0.00 0.00 3.32
429 430 0.108615 GCTAGAAGCGAGCCTGACAA 60.109 55.000 0.00 0.00 33.60 3.18
430 431 1.513158 GCTAGAAGCGAGCCTGACA 59.487 57.895 0.00 0.00 33.60 3.58
431 432 4.411136 GCTAGAAGCGAGCCTGAC 57.589 61.111 0.00 0.00 33.60 3.51
438 439 2.979814 TTATTGCTGGCTAGAAGCGA 57.020 45.000 0.00 9.52 43.62 4.93
439 440 4.355543 TTTTTATTGCTGGCTAGAAGCG 57.644 40.909 0.00 0.00 43.62 4.68
440 441 7.044052 CGTTTATTTTTATTGCTGGCTAGAAGC 60.044 37.037 0.00 10.16 41.46 3.86
441 442 8.181573 TCGTTTATTTTTATTGCTGGCTAGAAG 58.818 33.333 0.00 0.00 0.00 2.85
442 443 8.046294 TCGTTTATTTTTATTGCTGGCTAGAA 57.954 30.769 0.00 0.00 0.00 2.10
443 444 7.618502 TCGTTTATTTTTATTGCTGGCTAGA 57.381 32.000 0.00 0.00 0.00 2.43
444 445 8.682128 TTTCGTTTATTTTTATTGCTGGCTAG 57.318 30.769 0.00 0.00 0.00 3.42
445 446 9.081997 CATTTCGTTTATTTTTATTGCTGGCTA 57.918 29.630 0.00 0.00 0.00 3.93
446 447 7.816995 TCATTTCGTTTATTTTTATTGCTGGCT 59.183 29.630 0.00 0.00 0.00 4.75
447 448 7.897800 GTCATTTCGTTTATTTTTATTGCTGGC 59.102 33.333 0.00 0.00 0.00 4.85
448 449 8.920665 TGTCATTTCGTTTATTTTTATTGCTGG 58.079 29.630 0.00 0.00 0.00 4.85
451 452 9.233960 CGTTGTCATTTCGTTTATTTTTATTGC 57.766 29.630 0.00 0.00 0.00 3.56
454 455 8.846607 GCTCGTTGTCATTTCGTTTATTTTTAT 58.153 29.630 0.00 0.00 0.00 1.40
455 456 7.856398 TGCTCGTTGTCATTTCGTTTATTTTTA 59.144 29.630 0.00 0.00 0.00 1.52
456 457 6.693545 TGCTCGTTGTCATTTCGTTTATTTTT 59.306 30.769 0.00 0.00 0.00 1.94
457 458 6.141685 GTGCTCGTTGTCATTTCGTTTATTTT 59.858 34.615 0.00 0.00 0.00 1.82
458 459 5.623673 GTGCTCGTTGTCATTTCGTTTATTT 59.376 36.000 0.00 0.00 0.00 1.40
459 460 5.049680 AGTGCTCGTTGTCATTTCGTTTATT 60.050 36.000 0.00 0.00 0.00 1.40
460 461 4.451096 AGTGCTCGTTGTCATTTCGTTTAT 59.549 37.500 0.00 0.00 0.00 1.40
461 462 3.805422 AGTGCTCGTTGTCATTTCGTTTA 59.195 39.130 0.00 0.00 0.00 2.01
462 463 2.612212 AGTGCTCGTTGTCATTTCGTTT 59.388 40.909 0.00 0.00 0.00 3.60
463 464 2.210116 AGTGCTCGTTGTCATTTCGTT 58.790 42.857 0.00 0.00 0.00 3.85
464 465 1.792949 GAGTGCTCGTTGTCATTTCGT 59.207 47.619 0.00 0.00 0.00 3.85
465 466 1.126846 GGAGTGCTCGTTGTCATTTCG 59.873 52.381 0.00 0.00 0.00 3.46
466 467 2.143122 TGGAGTGCTCGTTGTCATTTC 58.857 47.619 0.00 0.00 0.00 2.17
467 468 2.254546 TGGAGTGCTCGTTGTCATTT 57.745 45.000 0.00 0.00 0.00 2.32
468 469 2.254546 TTGGAGTGCTCGTTGTCATT 57.745 45.000 0.00 0.00 0.00 2.57
469 470 2.254546 TTTGGAGTGCTCGTTGTCAT 57.745 45.000 0.00 0.00 0.00 3.06
470 471 2.254546 ATTTGGAGTGCTCGTTGTCA 57.745 45.000 0.00 0.00 0.00 3.58
471 472 3.064207 TGTATTTGGAGTGCTCGTTGTC 58.936 45.455 0.00 0.00 0.00 3.18
472 473 2.806244 GTGTATTTGGAGTGCTCGTTGT 59.194 45.455 0.00 0.00 0.00 3.32
473 474 2.159841 CGTGTATTTGGAGTGCTCGTTG 60.160 50.000 0.00 0.00 0.00 4.10
474 475 2.066262 CGTGTATTTGGAGTGCTCGTT 58.934 47.619 0.00 0.00 0.00 3.85
475 476 1.271379 TCGTGTATTTGGAGTGCTCGT 59.729 47.619 0.00 0.00 0.00 4.18
476 477 1.990799 TCGTGTATTTGGAGTGCTCG 58.009 50.000 0.00 0.00 0.00 5.03
477 478 4.184629 AGATTCGTGTATTTGGAGTGCTC 58.815 43.478 0.00 0.00 0.00 4.26
478 479 4.207891 AGATTCGTGTATTTGGAGTGCT 57.792 40.909 0.00 0.00 0.00 4.40
479 480 4.391830 TCAAGATTCGTGTATTTGGAGTGC 59.608 41.667 0.00 0.00 0.00 4.40
480 481 5.408299 TGTCAAGATTCGTGTATTTGGAGTG 59.592 40.000 0.00 0.00 0.00 3.51
481 482 5.547465 TGTCAAGATTCGTGTATTTGGAGT 58.453 37.500 0.00 0.00 0.00 3.85
482 483 6.402550 CCTTGTCAAGATTCGTGTATTTGGAG 60.403 42.308 14.42 0.00 0.00 3.86
483 484 5.411361 CCTTGTCAAGATTCGTGTATTTGGA 59.589 40.000 14.42 0.00 0.00 3.53
484 485 5.411361 TCCTTGTCAAGATTCGTGTATTTGG 59.589 40.000 14.42 0.00 0.00 3.28
485 486 6.147821 ACTCCTTGTCAAGATTCGTGTATTTG 59.852 38.462 14.42 0.00 0.00 2.32
486 487 6.231211 ACTCCTTGTCAAGATTCGTGTATTT 58.769 36.000 14.42 0.00 0.00 1.40
487 488 5.794894 ACTCCTTGTCAAGATTCGTGTATT 58.205 37.500 14.42 0.00 0.00 1.89
488 489 5.407407 ACTCCTTGTCAAGATTCGTGTAT 57.593 39.130 14.42 0.00 0.00 2.29
489 490 4.866508 ACTCCTTGTCAAGATTCGTGTA 57.133 40.909 14.42 0.00 0.00 2.90
490 491 3.753294 ACTCCTTGTCAAGATTCGTGT 57.247 42.857 14.42 1.86 0.00 4.49
491 492 5.470368 TCTAACTCCTTGTCAAGATTCGTG 58.530 41.667 14.42 1.26 0.00 4.35
492 493 5.723672 TCTAACTCCTTGTCAAGATTCGT 57.276 39.130 14.42 2.72 0.00 3.85
493 494 6.333416 TCATCTAACTCCTTGTCAAGATTCG 58.667 40.000 14.42 0.00 32.38 3.34
494 495 7.551585 TCTCATCTAACTCCTTGTCAAGATTC 58.448 38.462 14.42 0.00 32.38 2.52
495 496 7.398618 TCTCTCATCTAACTCCTTGTCAAGATT 59.601 37.037 14.42 7.82 32.38 2.40
496 497 6.894654 TCTCTCATCTAACTCCTTGTCAAGAT 59.105 38.462 14.42 0.00 33.94 2.40
497 498 6.249192 TCTCTCATCTAACTCCTTGTCAAGA 58.751 40.000 14.42 0.00 0.00 3.02
498 499 6.522625 TCTCTCATCTAACTCCTTGTCAAG 57.477 41.667 5.53 5.53 0.00 3.02
499 500 8.470805 GTTATCTCTCATCTAACTCCTTGTCAA 58.529 37.037 0.00 0.00 0.00 3.18
500 501 7.836685 AGTTATCTCTCATCTAACTCCTTGTCA 59.163 37.037 0.00 0.00 31.72 3.58
501 502 8.134895 CAGTTATCTCTCATCTAACTCCTTGTC 58.865 40.741 0.00 0.00 34.35 3.18
502 503 7.836685 TCAGTTATCTCTCATCTAACTCCTTGT 59.163 37.037 0.00 0.00 34.35 3.16
503 504 8.231692 TCAGTTATCTCTCATCTAACTCCTTG 57.768 38.462 0.00 0.00 34.35 3.61
504 505 8.830915 TTCAGTTATCTCTCATCTAACTCCTT 57.169 34.615 0.00 0.00 34.35 3.36
505 506 9.432982 AATTCAGTTATCTCTCATCTAACTCCT 57.567 33.333 0.00 0.00 34.35 3.69
562 563 9.341078 TCAAGCACATGATTAATTGCTATAAGA 57.659 29.630 11.73 6.50 44.57 2.10
563 564 9.955208 TTCAAGCACATGATTAATTGCTATAAG 57.045 29.630 11.73 4.73 44.57 1.73
564 565 9.955208 CTTCAAGCACATGATTAATTGCTATAA 57.045 29.630 11.73 8.76 44.57 0.98
565 566 9.341078 TCTTCAAGCACATGATTAATTGCTATA 57.659 29.630 11.73 2.54 44.57 1.31
566 567 8.133627 GTCTTCAAGCACATGATTAATTGCTAT 58.866 33.333 11.73 2.22 44.57 2.97
567 568 7.337689 AGTCTTCAAGCACATGATTAATTGCTA 59.662 33.333 11.73 0.00 44.57 3.49
569 570 6.327934 AGTCTTCAAGCACATGATTAATTGC 58.672 36.000 0.00 0.00 35.08 3.56
570 571 9.499585 CTAAGTCTTCAAGCACATGATTAATTG 57.500 33.333 0.00 0.00 0.00 2.32
571 572 9.453572 TCTAAGTCTTCAAGCACATGATTAATT 57.546 29.630 0.00 0.00 0.00 1.40
572 573 9.624373 ATCTAAGTCTTCAAGCACATGATTAAT 57.376 29.630 0.00 0.00 0.00 1.40
573 574 8.886719 CATCTAAGTCTTCAAGCACATGATTAA 58.113 33.333 0.00 0.00 0.00 1.40
574 575 8.043113 ACATCTAAGTCTTCAAGCACATGATTA 58.957 33.333 0.00 0.00 0.00 1.75
575 576 6.883217 ACATCTAAGTCTTCAAGCACATGATT 59.117 34.615 0.00 0.00 0.00 2.57
576 577 6.315642 CACATCTAAGTCTTCAAGCACATGAT 59.684 38.462 0.00 0.00 0.00 2.45
577 578 5.640783 CACATCTAAGTCTTCAAGCACATGA 59.359 40.000 0.00 0.00 0.00 3.07
578 579 5.640783 TCACATCTAAGTCTTCAAGCACATG 59.359 40.000 0.00 0.00 0.00 3.21
579 580 5.798132 TCACATCTAAGTCTTCAAGCACAT 58.202 37.500 0.00 0.00 0.00 3.21
580 581 5.213891 TCACATCTAAGTCTTCAAGCACA 57.786 39.130 0.00 0.00 0.00 4.57
581 582 4.629200 CCTCACATCTAAGTCTTCAAGCAC 59.371 45.833 0.00 0.00 0.00 4.40
582 583 4.284490 ACCTCACATCTAAGTCTTCAAGCA 59.716 41.667 0.00 0.00 0.00 3.91
583 584 4.826556 ACCTCACATCTAAGTCTTCAAGC 58.173 43.478 0.00 0.00 0.00 4.01
590 591 9.929180 TGCAATATATTACCTCACATCTAAGTC 57.071 33.333 0.00 0.00 0.00 3.01
609 610 8.944029 GTTGCTATTCACATCTAGATGCAATAT 58.056 33.333 28.86 19.25 42.39 1.28
610 611 7.388776 GGTTGCTATTCACATCTAGATGCAATA 59.611 37.037 28.86 25.75 42.39 1.90
611 612 6.206243 GGTTGCTATTCACATCTAGATGCAAT 59.794 38.462 28.86 25.96 42.39 3.56
612 613 5.528690 GGTTGCTATTCACATCTAGATGCAA 59.471 40.000 28.86 21.94 42.39 4.08
613 614 5.059161 GGTTGCTATTCACATCTAGATGCA 58.941 41.667 28.86 17.86 42.39 3.96
614 615 4.453819 GGGTTGCTATTCACATCTAGATGC 59.546 45.833 28.86 15.64 42.39 3.91
615 616 4.999950 GGGGTTGCTATTCACATCTAGATG 59.000 45.833 27.63 27.63 44.15 2.90
616 617 4.910304 AGGGGTTGCTATTCACATCTAGAT 59.090 41.667 0.00 0.00 0.00 1.98
617 618 4.298626 AGGGGTTGCTATTCACATCTAGA 58.701 43.478 0.00 0.00 0.00 2.43
618 619 4.696479 AGGGGTTGCTATTCACATCTAG 57.304 45.455 0.00 0.00 0.00 2.43
619 620 5.450818 AAAGGGGTTGCTATTCACATCTA 57.549 39.130 0.00 0.00 0.00 1.98
620 621 4.322057 AAAGGGGTTGCTATTCACATCT 57.678 40.909 0.00 0.00 0.00 2.90
621 622 5.405935 AAAAAGGGGTTGCTATTCACATC 57.594 39.130 0.00 0.00 0.00 3.06
753 754 5.966742 AGATGAAGCCTACAAAAACTTCC 57.033 39.130 0.00 0.00 38.17 3.46
822 837 2.749621 CAACTGCCTGGACTTGGTATTC 59.250 50.000 0.00 0.00 0.00 1.75
949 967 0.032615 GGAGAGGAGAGAGGAAGCCA 60.033 60.000 0.00 0.00 0.00 4.75
1296 1315 2.046314 CCGATGTGGAGGCCGTTT 60.046 61.111 0.00 0.00 42.00 3.60
1329 1348 1.077429 GGAAGGCATGAGGTGGTCC 60.077 63.158 0.00 0.00 0.00 4.46
1536 1555 2.042843 GCCTTCCTCTCCGGGAGA 60.043 66.667 24.65 24.65 41.45 3.71
2033 2068 2.623418 TCCTCTTGGAGAGCACCTTA 57.377 50.000 0.00 0.00 40.98 2.69
2262 2339 0.960364 TGGAACAGAAATCGCAGGCC 60.960 55.000 0.00 0.00 0.00 5.19
2263 2340 0.881118 TTGGAACAGAAATCGCAGGC 59.119 50.000 0.00 0.00 42.39 4.85
2264 2341 1.879380 TGTTGGAACAGAAATCGCAGG 59.121 47.619 0.00 0.00 42.39 4.85
2265 2342 3.624326 TTGTTGGAACAGAAATCGCAG 57.376 42.857 0.00 0.00 42.39 5.18
2266 2343 3.305267 CCATTGTTGGAACAGAAATCGCA 60.305 43.478 0.00 0.00 46.92 5.10
2267 2344 3.244976 CCATTGTTGGAACAGAAATCGC 58.755 45.455 0.00 0.00 46.92 4.58
2268 2345 3.244976 GCCATTGTTGGAACAGAAATCG 58.755 45.455 0.00 0.00 46.92 3.34
2269 2346 4.240096 CTGCCATTGTTGGAACAGAAATC 58.760 43.478 0.00 0.00 46.92 2.17
2270 2347 3.007182 CCTGCCATTGTTGGAACAGAAAT 59.993 43.478 0.00 0.00 46.92 2.17
2271 2348 2.364970 CCTGCCATTGTTGGAACAGAAA 59.635 45.455 0.00 0.00 46.92 2.52
2272 2349 1.962807 CCTGCCATTGTTGGAACAGAA 59.037 47.619 0.00 0.00 46.92 3.02
2273 2350 1.144708 TCCTGCCATTGTTGGAACAGA 59.855 47.619 0.00 0.00 46.92 3.41
2274 2351 1.542915 CTCCTGCCATTGTTGGAACAG 59.457 52.381 0.00 0.00 46.92 3.16
2275 2352 1.619654 CTCCTGCCATTGTTGGAACA 58.380 50.000 0.00 0.00 46.92 3.18
2276 2353 0.890683 CCTCCTGCCATTGTTGGAAC 59.109 55.000 0.00 0.00 46.92 3.62
2277 2354 0.899717 GCCTCCTGCCATTGTTGGAA 60.900 55.000 0.00 0.00 46.92 3.53
2278 2355 1.304381 GCCTCCTGCCATTGTTGGA 60.304 57.895 0.00 0.00 46.92 3.53
2279 2356 1.601419 CTGCCTCCTGCCATTGTTGG 61.601 60.000 0.00 0.00 46.66 3.77
2280 2357 0.896940 ACTGCCTCCTGCCATTGTTG 60.897 55.000 0.00 0.00 40.16 3.33
2281 2358 0.896940 CACTGCCTCCTGCCATTGTT 60.897 55.000 0.00 0.00 40.16 2.83
2282 2359 1.303888 CACTGCCTCCTGCCATTGT 60.304 57.895 0.00 0.00 40.16 2.71
2283 2360 0.609957 TTCACTGCCTCCTGCCATTG 60.610 55.000 0.00 0.00 40.16 2.82
2284 2361 0.323178 CTTCACTGCCTCCTGCCATT 60.323 55.000 0.00 0.00 40.16 3.16
2285 2362 1.302285 CTTCACTGCCTCCTGCCAT 59.698 57.895 0.00 0.00 40.16 4.40
2286 2363 2.752358 CTTCACTGCCTCCTGCCA 59.248 61.111 0.00 0.00 40.16 4.92
2287 2364 2.749441 GCTTCACTGCCTCCTGCC 60.749 66.667 0.00 0.00 40.16 4.85
2288 2365 2.033141 TGCTTCACTGCCTCCTGC 59.967 61.111 0.00 0.00 41.77 4.85
2289 2366 0.391395 CTCTGCTTCACTGCCTCCTG 60.391 60.000 0.00 0.00 0.00 3.86
2290 2367 0.543883 TCTCTGCTTCACTGCCTCCT 60.544 55.000 0.00 0.00 0.00 3.69
2291 2368 0.108233 CTCTCTGCTTCACTGCCTCC 60.108 60.000 0.00 0.00 0.00 4.30
2292 2369 0.894141 TCTCTCTGCTTCACTGCCTC 59.106 55.000 0.00 0.00 0.00 4.70
2293 2370 0.607620 GTCTCTCTGCTTCACTGCCT 59.392 55.000 0.00 0.00 0.00 4.75
2294 2371 0.319728 TGTCTCTCTGCTTCACTGCC 59.680 55.000 0.00 0.00 0.00 4.85
2295 2372 2.001159 CATGTCTCTCTGCTTCACTGC 58.999 52.381 0.00 0.00 0.00 4.40
2296 2373 2.619147 CCATGTCTCTCTGCTTCACTG 58.381 52.381 0.00 0.00 0.00 3.66
2325 2402 0.399454 AGCAGTCCATCAAGCACAGT 59.601 50.000 0.00 0.00 0.00 3.55
2360 2437 6.558909 CCTCAAGCATTTTATCAACTTCTCC 58.441 40.000 0.00 0.00 0.00 3.71
2385 2462 6.569228 TGTATGAGCTTTCGATTTTACTCG 57.431 37.500 0.00 0.00 39.99 4.18
2394 2471 6.091305 CAGATCAAGTTTGTATGAGCTTTCGA 59.909 38.462 0.00 0.00 40.09 3.71
2406 2483 8.778358 GTCTGTTAAGATTCAGATCAAGTTTGT 58.222 33.333 0.00 0.00 41.67 2.83
2417 2494 5.724328 TGGCTAGTGTCTGTTAAGATTCAG 58.276 41.667 0.00 0.00 34.13 3.02
2423 2500 5.297547 TGAGTTTGGCTAGTGTCTGTTAAG 58.702 41.667 0.00 0.00 0.00 1.85
2428 2505 4.756642 TGAAATGAGTTTGGCTAGTGTCTG 59.243 41.667 0.00 0.00 0.00 3.51
2603 2681 2.226437 CGAATTGGAACCACCTGACTTG 59.774 50.000 0.00 0.00 39.86 3.16
2858 2981 4.100084 TCCATGGCGGCACTCAGG 62.100 66.667 16.34 14.39 33.14 3.86
3200 3323 8.687242 TCCTCTTCAGTTACTACACTATTCATG 58.313 37.037 0.00 0.00 0.00 3.07
3237 3360 4.645588 AGCTTACCTAGTTACTGCCACTAG 59.354 45.833 0.00 6.81 42.40 2.57
3279 3402 9.103048 CACTTACATTAACGTCTGAAAAATGTC 57.897 33.333 2.54 0.00 40.32 3.06
3344 3467 1.213182 TCGAGCTCCCTCAGTCATAGT 59.787 52.381 8.47 0.00 38.00 2.12
3345 3468 1.879380 CTCGAGCTCCCTCAGTCATAG 59.121 57.143 8.47 0.00 38.00 2.23
3346 3469 1.974265 CTCGAGCTCCCTCAGTCATA 58.026 55.000 8.47 0.00 38.00 2.15
3347 3470 1.391157 GCTCGAGCTCCCTCAGTCAT 61.391 60.000 29.88 0.00 38.00 3.06
3360 3483 2.005451 CCATTCTTTCTGTGGCTCGAG 58.995 52.381 8.45 8.45 0.00 4.04
3415 3538 2.692557 CCGGTATGATTTTCAATGGCCA 59.307 45.455 8.56 8.56 0.00 5.36
3417 3540 4.385358 AACCGGTATGATTTTCAATGGC 57.615 40.909 8.00 0.00 0.00 4.40
3422 3545 4.755629 TCGTTCAAACCGGTATGATTTTCA 59.244 37.500 8.00 0.00 0.00 2.69
3427 3550 3.934068 ACTTCGTTCAAACCGGTATGAT 58.066 40.909 8.00 0.00 0.00 2.45
3462 3585 6.021704 GTCGCTTAAATCCGAGTAAAATTTGC 60.022 38.462 0.00 0.00 33.71 3.68
3467 3590 5.349543 GGAAGTCGCTTAAATCCGAGTAAAA 59.650 40.000 0.00 0.00 36.22 1.52
3475 3600 6.645003 ACAAAATTTGGAAGTCGCTTAAATCC 59.355 34.615 10.71 0.00 34.12 3.01
3481 3606 5.415221 TCAAACAAAATTTGGAAGTCGCTT 58.585 33.333 10.71 0.00 34.12 4.68
3484 3609 8.574196 ACTATTCAAACAAAATTTGGAAGTCG 57.426 30.769 10.71 0.93 34.12 4.18
3494 3619 6.493189 ACCACCCAACTATTCAAACAAAAT 57.507 33.333 0.00 0.00 0.00 1.82
3539 3664 2.424234 GGGCAGAAAATATACAGGGGCA 60.424 50.000 0.00 0.00 0.00 5.36
3540 3665 2.158460 AGGGCAGAAAATATACAGGGGC 60.158 50.000 0.00 0.00 0.00 5.80
3673 3798 5.258841 TGATTGGCTTCACATTTCAGATCT 58.741 37.500 0.00 0.00 0.00 2.75
3697 3822 8.805175 TGTAAATGATCAAAGGTCACAATGATT 58.195 29.630 0.00 0.00 32.90 2.57
3761 3917 7.106439 TGTTTTGCTTCATACTTTTCTTGGA 57.894 32.000 0.00 0.00 0.00 3.53
3862 4019 2.093447 AGATGTGGCACTAGCTAACACC 60.093 50.000 19.83 6.79 39.10 4.16
3874 4031 1.985614 CCACTCTGGAGATGTGGCA 59.014 57.895 4.49 0.00 43.61 4.92
3965 4122 2.028876 TCCGACGACATGTGGATGTAT 58.971 47.619 15.36 0.00 43.22 2.29
4039 4196 9.527157 TTCCTTGTCAATCTGACCAAATATTTA 57.473 29.630 0.00 0.00 46.40 1.40
4163 4320 7.733773 TGAGGTCTAACTTGGATTAATCTGA 57.266 36.000 14.95 3.69 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.