Multiple sequence alignment - TraesCS2D01G190200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G190200 chr2D 100.000 5451 0 0 1 5451 134291778 134297228 0.000000e+00 10067.0
1 TraesCS2D01G190200 chr2D 86.151 2094 250 24 1192 3268 20611386 20609316 0.000000e+00 2224.0
2 TraesCS2D01G190200 chr2D 84.010 2020 303 8 1224 3242 20619601 20617601 0.000000e+00 1923.0
3 TraesCS2D01G190200 chr2D 81.677 1157 166 22 1162 2284 20648552 20647408 0.000000e+00 920.0
4 TraesCS2D01G190200 chr2D 80.525 991 164 13 2286 3268 20636999 20636030 0.000000e+00 734.0
5 TraesCS2D01G190200 chr2D 82.497 817 123 8 2427 3242 20654671 20653874 0.000000e+00 699.0
6 TraesCS2D01G190200 chr2D 80.189 106 15 6 4664 4765 144997940 144998043 2.110000e-09 75.0
7 TraesCS2D01G190200 chr2A 92.925 4820 246 42 49 4822 141880992 141885762 0.000000e+00 6924.0
8 TraesCS2D01G190200 chr2A 83.477 1277 204 4 1419 2689 21209379 21208104 0.000000e+00 1182.0
9 TraesCS2D01G190200 chr2A 86.834 676 74 10 2571 3242 21233310 21232646 0.000000e+00 741.0
10 TraesCS2D01G190200 chr2A 81.835 545 90 5 2677 3221 21208083 21207548 2.990000e-122 449.0
11 TraesCS2D01G190200 chr2A 94.372 231 11 2 5222 5451 141891628 141891857 2.420000e-93 353.0
12 TraesCS2D01G190200 chr2A 82.486 354 26 16 4878 5230 141886026 141886344 1.500000e-70 278.0
13 TraesCS2D01G190200 chr2A 86.864 236 29 2 2291 2525 21233550 21233316 4.190000e-66 263.0
14 TraesCS2D01G190200 chr2B 93.920 4145 190 25 496 4596 190194796 190198922 0.000000e+00 6202.0
15 TraesCS2D01G190200 chr2B 88.710 744 78 3 1529 2271 33771831 33771093 0.000000e+00 904.0
16 TraesCS2D01G190200 chr2B 88.262 443 28 16 50 478 190194060 190194492 4.870000e-140 508.0
17 TraesCS2D01G190200 chr2B 87.259 259 29 4 5072 5327 190232590 190232847 5.340000e-75 292.0
18 TraesCS2D01G190200 chr2B 84.659 176 19 5 1157 1325 33772014 33771840 9.390000e-38 169.0
19 TraesCS2D01G190200 chrUn 83.144 1412 226 10 1159 2561 373122184 373123592 0.000000e+00 1279.0
20 TraesCS2D01G190200 chr4B 84.564 149 15 7 5065 5206 517169961 517170108 2.050000e-29 141.0
21 TraesCS2D01G190200 chr5B 82.787 122 20 1 4606 4726 704167872 704167751 2.080000e-19 108.0
22 TraesCS2D01G190200 chr6B 82.645 121 19 2 4600 4719 46348668 46348549 7.470000e-19 106.0
23 TraesCS2D01G190200 chr1B 80.469 128 23 2 4606 4731 49319117 49318990 4.490000e-16 97.1
24 TraesCS2D01G190200 chr1B 88.571 70 8 0 4664 4733 20044117 20044186 9.730000e-13 86.1
25 TraesCS2D01G190200 chr1B 83.750 80 9 2 3575 3652 603092216 603092139 7.570000e-09 73.1
26 TraesCS2D01G190200 chr1B 82.667 75 9 2 3580 3652 603147907 603147835 4.560000e-06 63.9
27 TraesCS2D01G190200 chr3D 79.839 124 23 2 4606 4728 281905325 281905447 7.520000e-14 89.8
28 TraesCS2D01G190200 chr3D 92.857 56 4 0 4664 4719 11271276 11271331 1.260000e-11 82.4
29 TraesCS2D01G190200 chr3D 97.500 40 1 0 3580 3619 341495006 341495045 9.800000e-08 69.4
30 TraesCS2D01G190200 chr5A 82.292 96 13 4 4282 4375 594972693 594972600 4.530000e-11 80.5
31 TraesCS2D01G190200 chr3A 81.000 100 17 2 4630 4728 368523353 368523451 1.630000e-10 78.7
32 TraesCS2D01G190200 chr3A 84.000 75 8 2 3580 3652 461840113 461840041 9.800000e-08 69.4
33 TraesCS2D01G190200 chr4D 84.211 76 12 0 4282 4357 338011851 338011776 2.110000e-09 75.0
34 TraesCS2D01G190200 chr1D 83.750 80 9 2 3575 3652 443428056 443427979 7.570000e-09 73.1
35 TraesCS2D01G190200 chr1A 83.544 79 11 2 3575 3652 539426727 539426650 7.570000e-09 73.1
36 TraesCS2D01G190200 chr3B 95.000 40 2 0 3580 3619 440230441 440230480 4.560000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G190200 chr2D 134291778 134297228 5450 False 10067.0 10067 100.0000 1 5451 1 chr2D.!!$F1 5450
1 TraesCS2D01G190200 chr2D 20609316 20611386 2070 True 2224.0 2224 86.1510 1192 3268 1 chr2D.!!$R1 2076
2 TraesCS2D01G190200 chr2D 20617601 20619601 2000 True 1923.0 1923 84.0100 1224 3242 1 chr2D.!!$R2 2018
3 TraesCS2D01G190200 chr2D 20647408 20648552 1144 True 920.0 920 81.6770 1162 2284 1 chr2D.!!$R4 1122
4 TraesCS2D01G190200 chr2D 20636030 20636999 969 True 734.0 734 80.5250 2286 3268 1 chr2D.!!$R3 982
5 TraesCS2D01G190200 chr2D 20653874 20654671 797 True 699.0 699 82.4970 2427 3242 1 chr2D.!!$R5 815
6 TraesCS2D01G190200 chr2A 141880992 141886344 5352 False 3601.0 6924 87.7055 49 5230 2 chr2A.!!$F2 5181
7 TraesCS2D01G190200 chr2A 21207548 21209379 1831 True 815.5 1182 82.6560 1419 3221 2 chr2A.!!$R1 1802
8 TraesCS2D01G190200 chr2A 21232646 21233550 904 True 502.0 741 86.8490 2291 3242 2 chr2A.!!$R2 951
9 TraesCS2D01G190200 chr2B 190194060 190198922 4862 False 3355.0 6202 91.0910 50 4596 2 chr2B.!!$F2 4546
10 TraesCS2D01G190200 chr2B 33771093 33772014 921 True 536.5 904 86.6845 1157 2271 2 chr2B.!!$R1 1114
11 TraesCS2D01G190200 chrUn 373122184 373123592 1408 False 1279.0 1279 83.1440 1159 2561 1 chrUn.!!$F1 1402

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 782 0.035439 TGCCGATCCCTTCTTGTTCC 60.035 55.000 0.00 0.00 0.00 3.62 F
1108 1458 0.321671 CTTCTCTTCTTGGGGCGTGA 59.678 55.000 0.00 0.00 0.00 4.35 F
1443 1815 0.250234 CTCTCCGGCAACTCCATCAA 59.750 55.000 0.00 0.00 34.01 2.57 F
2401 2804 1.188219 GGATCCCAGCGAGCATAGGA 61.188 60.000 0.00 0.56 0.00 2.94 F
2689 3095 1.376543 TCGTCTACTCCGTCATGACC 58.623 55.000 20.03 2.51 0.00 4.02 F
3439 3899 2.165301 CGCGTTCGGAATGTCCTCC 61.165 63.158 11.33 0.00 33.30 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1377 1745 0.600255 CGAGAAGTTGCCGAACACCT 60.600 55.000 0.00 0.0 34.17 4.00 R
3094 3548 0.531200 CGGAGAGGAGTGGGTTGTAC 59.469 60.000 0.00 0.0 0.00 2.90 R
3268 3722 0.250081 GCCAGATCCCGATGGTTCTC 60.250 60.000 1.12 0.0 38.41 2.87 R
3523 3983 0.866061 CGATGTCGCGGTAGGTGAAG 60.866 60.000 6.13 0.0 36.80 3.02 R
4132 4592 1.586564 GAGCACGCCGTAGCTGTAG 60.587 63.158 16.65 0.0 42.04 2.74 R
5337 6030 0.033504 TCTTGGTCCAAGACAGCGAC 59.966 55.000 27.39 0.0 44.27 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.569179 GTTATAGGCACTTCCAACAAAGAA 57.431 37.500 0.00 0.00 41.75 2.52
24 25 6.977213 GTTATAGGCACTTCCAACAAAGAAA 58.023 36.000 0.00 0.00 41.75 2.52
25 26 7.430441 GTTATAGGCACTTCCAACAAAGAAAA 58.570 34.615 0.00 0.00 41.75 2.29
26 27 4.123497 AGGCACTTCCAACAAAGAAAAC 57.877 40.909 0.00 0.00 37.29 2.43
27 28 2.857748 GGCACTTCCAACAAAGAAAACG 59.142 45.455 0.00 0.00 34.01 3.60
28 29 3.507786 GCACTTCCAACAAAGAAAACGT 58.492 40.909 0.00 0.00 0.00 3.99
29 30 3.303229 GCACTTCCAACAAAGAAAACGTG 59.697 43.478 0.00 0.00 0.00 4.49
30 31 4.481463 CACTTCCAACAAAGAAAACGTGT 58.519 39.130 0.00 0.00 0.00 4.49
31 32 4.323336 CACTTCCAACAAAGAAAACGTGTG 59.677 41.667 0.00 0.00 0.00 3.82
32 33 4.022676 ACTTCCAACAAAGAAAACGTGTGT 60.023 37.500 0.00 0.00 0.00 3.72
33 34 4.086199 TCCAACAAAGAAAACGTGTGTC 57.914 40.909 0.00 0.00 0.00 3.67
34 35 3.119779 TCCAACAAAGAAAACGTGTGTCC 60.120 43.478 0.00 0.00 0.00 4.02
35 36 2.817538 ACAAAGAAAACGTGTGTCCG 57.182 45.000 0.00 0.00 0.00 4.79
36 37 2.078392 ACAAAGAAAACGTGTGTCCGT 58.922 42.857 0.00 0.00 44.23 4.69
43 44 2.437850 ACGTGTGTCCGTTTATCGC 58.562 52.632 0.00 0.00 37.96 4.58
44 45 1.010419 ACGTGTGTCCGTTTATCGCC 61.010 55.000 0.00 0.00 37.96 5.54
45 46 1.705727 GTGTGTCCGTTTATCGCCG 59.294 57.895 0.00 0.00 38.35 6.46
46 47 2.095847 TGTGTCCGTTTATCGCCGC 61.096 57.895 0.00 0.00 38.35 6.53
47 48 2.881827 TGTCCGTTTATCGCCGCG 60.882 61.111 6.39 6.39 38.35 6.46
65 66 0.179282 CGTTAACTCTTCACACGCGC 60.179 55.000 5.73 0.00 0.00 6.86
68 69 0.666274 TAACTCTTCACACGCGCAGG 60.666 55.000 5.73 0.00 0.00 4.85
292 307 5.007724 GCCAAAACATCATAGTACTACCAGC 59.992 44.000 4.31 0.00 0.00 4.85
299 314 7.493367 ACATCATAGTACTACCAGCTTTTCTC 58.507 38.462 4.31 0.00 0.00 2.87
303 318 7.561722 TCATAGTACTACCAGCTTTTCTCTCAT 59.438 37.037 4.31 0.00 0.00 2.90
323 342 9.918630 CTCTCATGGAAAAATGAAAATGTTAGT 57.081 29.630 0.00 0.00 36.16 2.24
436 457 1.875996 CGTCATGCGGCCATATGGTAA 60.876 52.381 22.79 6.91 37.57 2.85
449 470 4.449068 CCATATGGTAACTTGAGATGTCGC 59.551 45.833 14.09 0.00 37.61 5.19
468 489 1.992667 GCCGGAGCTGTTAAAAATTGC 59.007 47.619 5.05 0.00 35.50 3.56
485 782 0.035439 TGCCGATCCCTTCTTGTTCC 60.035 55.000 0.00 0.00 0.00 3.62
492 789 1.237285 CCCTTCTTGTTCCCGCAGTG 61.237 60.000 0.00 0.00 0.00 3.66
493 790 1.576421 CTTCTTGTTCCCGCAGTGC 59.424 57.895 4.58 4.58 0.00 4.40
594 901 0.405585 TTGGAGGGAAAGCAAGGGAG 59.594 55.000 0.00 0.00 0.00 4.30
595 902 1.304617 GGAGGGAAAGCAAGGGAGG 59.695 63.158 0.00 0.00 0.00 4.30
596 903 1.304617 GAGGGAAAGCAAGGGAGGG 59.695 63.158 0.00 0.00 0.00 4.30
816 1135 7.097192 ACTTTTGTTTTGTCTTTCCTTTCCTC 58.903 34.615 0.00 0.00 0.00 3.71
835 1154 0.517316 CGCTTGCTTACTTCACACCC 59.483 55.000 0.00 0.00 0.00 4.61
860 1179 1.218316 GGCCTCGTCTTCGGATTGT 59.782 57.895 0.00 0.00 37.69 2.71
895 1224 2.164865 AACACCGAGCAGAGCAGAGG 62.165 60.000 0.00 0.00 0.00 3.69
896 1225 3.768922 ACCGAGCAGAGCAGAGGC 61.769 66.667 0.00 0.00 41.61 4.70
921 1255 1.283029 AGCCAAGAAGAAGCATAGGCA 59.717 47.619 0.67 0.00 44.61 4.75
922 1256 2.091994 AGCCAAGAAGAAGCATAGGCAT 60.092 45.455 0.67 0.00 44.61 4.40
923 1257 3.137176 AGCCAAGAAGAAGCATAGGCATA 59.863 43.478 0.67 0.00 44.61 3.14
924 1258 3.501445 GCCAAGAAGAAGCATAGGCATAG 59.499 47.826 0.67 0.00 44.61 2.23
925 1259 4.070716 CCAAGAAGAAGCATAGGCATAGG 58.929 47.826 0.67 0.00 44.61 2.57
926 1260 3.415457 AGAAGAAGCATAGGCATAGGC 57.585 47.619 6.97 6.97 44.61 3.93
927 1261 2.072298 GAAGAAGCATAGGCATAGGCG 58.928 52.381 9.55 0.00 43.41 5.52
973 1307 3.975670 CCTTTCGTCTAGGATTCGATTCG 59.024 47.826 0.00 0.00 34.56 3.34
977 1311 2.289820 CGTCTAGGATTCGATTCGTCCA 59.710 50.000 15.60 4.07 34.42 4.02
978 1312 3.058155 CGTCTAGGATTCGATTCGTCCAT 60.058 47.826 15.60 3.82 34.42 3.41
979 1313 4.230657 GTCTAGGATTCGATTCGTCCATG 58.769 47.826 15.60 9.03 34.42 3.66
982 1316 4.342862 AGGATTCGATTCGTCCATGATT 57.657 40.909 15.60 0.00 34.42 2.57
996 1333 3.462954 TCCATGATTATTCAGGAGGGCAA 59.537 43.478 0.00 0.00 35.69 4.52
1084 1421 5.280215 CCTCCCTTTCTTTCTTGCTCTCTTA 60.280 44.000 0.00 0.00 0.00 2.10
1108 1458 0.321671 CTTCTCTTCTTGGGGCGTGA 59.678 55.000 0.00 0.00 0.00 4.35
1144 1494 3.367087 CGTGGAGTCGGTCTAATTTGAGT 60.367 47.826 0.00 0.00 0.00 3.41
1154 1504 5.667466 GGTCTAATTTGAGTGGGTCGATTA 58.333 41.667 0.00 0.00 0.00 1.75
1377 1745 3.147595 CTCGACCATCTCCGGCCA 61.148 66.667 2.24 0.00 0.00 5.36
1380 1748 3.083997 GACCATCTCCGGCCAGGT 61.084 66.667 2.24 1.25 41.99 4.00
1431 1799 3.878519 GTCGCTCGACCTCTCCGG 61.879 72.222 11.01 0.00 39.08 5.14
1443 1815 0.250234 CTCTCCGGCAACTCCATCAA 59.750 55.000 0.00 0.00 34.01 2.57
1522 1894 1.374947 CCACAACCTCATCACCGGT 59.625 57.895 0.00 0.00 34.27 5.28
1629 2027 1.299850 CGATATGCGCCGACCTCAA 60.300 57.895 4.18 0.00 0.00 3.02
1692 2090 2.434884 CCTGTTCGATGGCTGCGT 60.435 61.111 0.00 0.00 0.00 5.24
1750 2148 3.550431 GGCGAGCTATGGCCTGGA 61.550 66.667 14.03 0.00 46.22 3.86
2401 2804 1.188219 GGATCCCAGCGAGCATAGGA 61.188 60.000 0.00 0.56 0.00 2.94
2689 3095 1.376543 TCGTCTACTCCGTCATGACC 58.623 55.000 20.03 2.51 0.00 4.02
3094 3548 3.367932 AGCTATCAATGTTCAACGTGTCG 59.632 43.478 0.00 0.00 0.00 4.35
3184 3638 2.485122 GGCAACCCGCTCATTTCG 59.515 61.111 0.00 0.00 41.91 3.46
3251 3705 2.811317 CCGACGCTCCTGCAGTTC 60.811 66.667 13.81 0.00 39.64 3.01
3321 3775 4.005472 CATCGCCTTCATCGCCGC 62.005 66.667 0.00 0.00 0.00 6.53
3439 3899 2.165301 CGCGTTCGGAATGTCCTCC 61.165 63.158 11.33 0.00 33.30 4.30
4542 5005 5.926542 CGTTCATTCATGTATGTAGGTAGGG 59.073 44.000 11.55 0.00 0.00 3.53
4640 5120 5.586643 GCCCCTAACATATGCTATTAGCTTC 59.413 44.000 16.29 0.00 42.97 3.86
4648 5128 9.973450 AACATATGCTATTAGCTTCCTATATCG 57.027 33.333 16.29 8.24 42.97 2.92
4649 5129 9.137459 ACATATGCTATTAGCTTCCTATATCGT 57.863 33.333 16.29 8.70 42.97 3.73
4651 5131 6.835819 TGCTATTAGCTTCCTATATCGTGT 57.164 37.500 16.29 0.00 42.97 4.49
4653 5133 7.090808 TGCTATTAGCTTCCTATATCGTGTTG 58.909 38.462 16.29 0.00 42.97 3.33
4654 5134 7.091443 GCTATTAGCTTCCTATATCGTGTTGT 58.909 38.462 8.47 0.00 38.45 3.32
4655 5135 8.242053 GCTATTAGCTTCCTATATCGTGTTGTA 58.758 37.037 8.47 0.00 38.45 2.41
4656 5136 9.776158 CTATTAGCTTCCTATATCGTGTTGTAG 57.224 37.037 0.00 0.00 0.00 2.74
4660 5140 5.221185 GCTTCCTATATCGTGTTGTAGGTGA 60.221 44.000 0.00 0.00 36.08 4.02
4662 5142 6.327279 TCCTATATCGTGTTGTAGGTGATG 57.673 41.667 0.00 0.00 36.08 3.07
4692 5172 9.647797 ACGAGACATTGTACACTGATTTATTTA 57.352 29.630 19.02 0.00 0.00 1.40
4695 5175 8.604035 AGACATTGTACACTGATTTATTTAGCG 58.396 33.333 19.02 0.00 0.00 4.26
4698 5178 8.604035 CATTGTACACTGATTTATTTAGCGAGT 58.396 33.333 7.41 0.00 0.00 4.18
4703 5183 7.688372 ACACTGATTTATTTAGCGAGTCATTG 58.312 34.615 0.00 0.00 0.00 2.82
4704 5184 7.128331 CACTGATTTATTTAGCGAGTCATTGG 58.872 38.462 0.00 0.00 0.00 3.16
4706 5186 7.011482 ACTGATTTATTTAGCGAGTCATTGGTC 59.989 37.037 0.00 0.00 0.00 4.02
4708 5188 6.662414 TTTATTTAGCGAGTCATTGGTCAG 57.338 37.500 0.00 0.00 0.00 3.51
4712 5192 0.716108 GCGAGTCATTGGTCAGAACG 59.284 55.000 0.00 0.00 0.00 3.95
4714 5194 1.670087 CGAGTCATTGGTCAGAACGCT 60.670 52.381 0.00 0.00 0.00 5.07
4720 5200 4.504461 GTCATTGGTCAGAACGCTATAGTG 59.496 45.833 11.80 11.80 0.00 2.74
4722 5202 5.358725 TCATTGGTCAGAACGCTATAGTGTA 59.641 40.000 18.93 0.93 37.87 2.90
4733 5213 6.163159 ACGCTATAGTGTACTATTAGCGAC 57.837 41.667 32.58 7.18 46.67 5.19
4736 5216 6.347160 CGCTATAGTGTACTATTAGCGACACA 60.347 42.308 28.09 13.40 46.67 3.72
4737 5217 7.528307 GCTATAGTGTACTATTAGCGACACAT 58.472 38.462 22.09 17.10 43.72 3.21
4741 5221 6.197276 AGTGTACTATTAGCGACACATTACG 58.803 40.000 22.09 0.00 43.72 3.18
4747 5227 1.131826 GCGACACATTACGCGCTTT 59.868 52.632 5.73 0.00 45.41 3.51
4798 5281 3.873910 TGTCACTTATGCTTTAGGCCTC 58.126 45.455 9.68 0.00 40.92 4.70
4799 5282 3.263170 TGTCACTTATGCTTTAGGCCTCA 59.737 43.478 9.68 0.00 40.92 3.86
4810 5293 3.485463 TTAGGCCTCAATATCCAACGG 57.515 47.619 9.68 0.00 0.00 4.44
4813 5296 1.217882 GCCTCAATATCCAACGGTCG 58.782 55.000 0.00 0.00 0.00 4.79
4814 5297 1.202486 GCCTCAATATCCAACGGTCGA 60.202 52.381 0.00 0.00 0.00 4.20
4816 5299 3.123804 CCTCAATATCCAACGGTCGAAG 58.876 50.000 0.00 0.00 0.00 3.79
4817 5300 2.540101 CTCAATATCCAACGGTCGAAGC 59.460 50.000 0.00 0.00 0.00 3.86
4818 5301 1.257936 CAATATCCAACGGTCGAAGCG 59.742 52.381 0.00 0.00 45.69 4.68
4825 5308 3.164011 CGGTCGAAGCGTGTCGTC 61.164 66.667 9.23 4.62 41.80 4.20
4826 5309 2.050714 GGTCGAAGCGTGTCGTCA 60.051 61.111 9.23 0.00 41.80 4.35
4827 5310 1.443872 GGTCGAAGCGTGTCGTCAT 60.444 57.895 9.23 0.00 41.80 3.06
4828 5311 1.007336 GGTCGAAGCGTGTCGTCATT 61.007 55.000 9.23 0.00 41.80 2.57
4829 5312 0.091344 GTCGAAGCGTGTCGTCATTG 59.909 55.000 9.23 0.00 41.80 2.82
4830 5313 0.318360 TCGAAGCGTGTCGTCATTGT 60.318 50.000 9.23 0.00 41.80 2.71
4831 5314 0.506932 CGAAGCGTGTCGTCATTGTT 59.493 50.000 2.22 0.00 36.26 2.83
4833 5316 2.154198 CGAAGCGTGTCGTCATTGTTTA 59.846 45.455 2.22 0.00 36.26 2.01
4834 5317 3.466836 GAAGCGTGTCGTCATTGTTTAC 58.533 45.455 0.00 0.00 0.00 2.01
4852 5335 2.696504 CCCCCTCCCTTTCCCCTC 60.697 72.222 0.00 0.00 0.00 4.30
4853 5336 2.127297 CCCCTCCCTTTCCCCTCA 59.873 66.667 0.00 0.00 0.00 3.86
4854 5337 2.003548 CCCCTCCCTTTCCCCTCAG 61.004 68.421 0.00 0.00 0.00 3.35
4855 5338 1.229984 CCCTCCCTTTCCCCTCAGT 60.230 63.158 0.00 0.00 0.00 3.41
4856 5339 0.846870 CCCTCCCTTTCCCCTCAGTT 60.847 60.000 0.00 0.00 0.00 3.16
4857 5340 0.621082 CCTCCCTTTCCCCTCAGTTC 59.379 60.000 0.00 0.00 0.00 3.01
4858 5341 1.662686 CTCCCTTTCCCCTCAGTTCT 58.337 55.000 0.00 0.00 0.00 3.01
4859 5342 1.988846 CTCCCTTTCCCCTCAGTTCTT 59.011 52.381 0.00 0.00 0.00 2.52
4860 5343 1.985895 TCCCTTTCCCCTCAGTTCTTC 59.014 52.381 0.00 0.00 0.00 2.87
4861 5344 1.339151 CCCTTTCCCCTCAGTTCTTCG 60.339 57.143 0.00 0.00 0.00 3.79
4862 5345 1.348036 CCTTTCCCCTCAGTTCTTCGT 59.652 52.381 0.00 0.00 0.00 3.85
4863 5346 2.613223 CCTTTCCCCTCAGTTCTTCGTC 60.613 54.545 0.00 0.00 0.00 4.20
4864 5347 0.974383 TTCCCCTCAGTTCTTCGTCC 59.026 55.000 0.00 0.00 0.00 4.79
4865 5348 0.114560 TCCCCTCAGTTCTTCGTCCT 59.885 55.000 0.00 0.00 0.00 3.85
4866 5349 0.533032 CCCCTCAGTTCTTCGTCCTC 59.467 60.000 0.00 0.00 0.00 3.71
4867 5350 0.533032 CCCTCAGTTCTTCGTCCTCC 59.467 60.000 0.00 0.00 0.00 4.30
4868 5351 1.551452 CCTCAGTTCTTCGTCCTCCT 58.449 55.000 0.00 0.00 0.00 3.69
4869 5352 1.896465 CCTCAGTTCTTCGTCCTCCTT 59.104 52.381 0.00 0.00 0.00 3.36
4870 5353 2.300437 CCTCAGTTCTTCGTCCTCCTTT 59.700 50.000 0.00 0.00 0.00 3.11
4871 5354 3.580731 CTCAGTTCTTCGTCCTCCTTTC 58.419 50.000 0.00 0.00 0.00 2.62
4872 5355 3.231818 TCAGTTCTTCGTCCTCCTTTCT 58.768 45.455 0.00 0.00 0.00 2.52
4873 5356 3.256136 TCAGTTCTTCGTCCTCCTTTCTC 59.744 47.826 0.00 0.00 0.00 2.87
4874 5357 2.229302 AGTTCTTCGTCCTCCTTTCTCG 59.771 50.000 0.00 0.00 0.00 4.04
4875 5358 0.526662 TCTTCGTCCTCCTTTCTCGC 59.473 55.000 0.00 0.00 0.00 5.03
4876 5359 0.798771 CTTCGTCCTCCTTTCTCGCG 60.799 60.000 0.00 0.00 0.00 5.87
4900 5592 2.731691 TTCTTCCTGCTCCACACGGC 62.732 60.000 0.00 0.00 0.00 5.68
4928 5620 2.186903 CTAACCGCGTGCCTCCAT 59.813 61.111 4.92 0.00 0.00 3.41
4933 5625 4.899239 CGCGTGCCTCCATCCCTC 62.899 72.222 0.00 0.00 0.00 4.30
4938 5630 3.474570 GCCTCCATCCCTCGTGCT 61.475 66.667 0.00 0.00 0.00 4.40
4972 5664 4.936081 CTCCCCGCCCCGACCTAT 62.936 72.222 0.00 0.00 0.00 2.57
4981 5673 1.831286 CCCGACCTATACCCGCAGT 60.831 63.158 0.00 0.00 0.00 4.40
4989 5681 3.181458 ACCTATACCCGCAGTTGTATTGG 60.181 47.826 8.07 8.07 42.41 3.16
5026 5718 2.124901 TTAAGCCCCGCACCATCG 60.125 61.111 0.00 0.00 0.00 3.84
5037 5729 1.061131 CGCACCATCGATGAACAACTC 59.939 52.381 26.86 7.22 0.00 3.01
5039 5731 2.698803 CACCATCGATGAACAACTCCA 58.301 47.619 26.86 0.00 0.00 3.86
5040 5732 3.073678 CACCATCGATGAACAACTCCAA 58.926 45.455 26.86 0.00 0.00 3.53
5041 5733 3.074412 ACCATCGATGAACAACTCCAAC 58.926 45.455 26.86 0.00 0.00 3.77
5044 5736 2.400399 TCGATGAACAACTCCAACGAC 58.600 47.619 0.00 0.00 33.73 4.34
5086 5778 7.450903 CCCTAAGGTAGATAATAAGGTTGTGG 58.549 42.308 0.00 0.00 0.00 4.17
5087 5779 6.935208 CCTAAGGTAGATAATAAGGTTGTGGC 59.065 42.308 0.00 0.00 0.00 5.01
5088 5780 6.576778 AAGGTAGATAATAAGGTTGTGGCT 57.423 37.500 0.00 0.00 0.00 4.75
5089 5781 6.576778 AGGTAGATAATAAGGTTGTGGCTT 57.423 37.500 0.00 0.00 0.00 4.35
5090 5782 6.970191 AGGTAGATAATAAGGTTGTGGCTTT 58.030 36.000 0.00 0.00 0.00 3.51
5091 5783 7.054751 AGGTAGATAATAAGGTTGTGGCTTTC 58.945 38.462 0.00 0.00 0.00 2.62
5092 5784 6.826741 GGTAGATAATAAGGTTGTGGCTTTCA 59.173 38.462 0.00 0.00 0.00 2.69
5093 5785 6.759497 AGATAATAAGGTTGTGGCTTTCAC 57.241 37.500 0.00 0.00 46.23 3.18
5094 5786 5.652452 AGATAATAAGGTTGTGGCTTTCACC 59.348 40.000 0.00 0.00 45.48 4.02
5095 5787 3.525800 ATAAGGTTGTGGCTTTCACCT 57.474 42.857 0.00 0.00 45.48 4.00
5096 5788 4.650972 ATAAGGTTGTGGCTTTCACCTA 57.349 40.909 0.00 0.00 45.48 3.08
5097 5789 2.568623 AGGTTGTGGCTTTCACCTAG 57.431 50.000 0.00 0.00 45.48 3.02
5098 5790 2.054799 AGGTTGTGGCTTTCACCTAGA 58.945 47.619 0.00 0.00 45.48 2.43
5099 5791 2.644798 AGGTTGTGGCTTTCACCTAGAT 59.355 45.455 0.00 0.00 45.48 1.98
5100 5792 3.844211 AGGTTGTGGCTTTCACCTAGATA 59.156 43.478 0.00 0.00 45.48 1.98
5101 5793 4.288626 AGGTTGTGGCTTTCACCTAGATAA 59.711 41.667 0.00 0.00 45.48 1.75
5102 5794 5.044846 AGGTTGTGGCTTTCACCTAGATAAT 60.045 40.000 0.00 0.00 45.48 1.28
5103 5795 5.066505 GGTTGTGGCTTTCACCTAGATAATG 59.933 44.000 0.00 0.00 45.48 1.90
5104 5796 5.692115 TGTGGCTTTCACCTAGATAATGA 57.308 39.130 0.00 0.00 45.48 2.57
5105 5797 6.252599 TGTGGCTTTCACCTAGATAATGAT 57.747 37.500 0.00 0.00 45.48 2.45
5106 5798 7.373617 TGTGGCTTTCACCTAGATAATGATA 57.626 36.000 0.00 0.00 45.48 2.15
5107 5799 7.217200 TGTGGCTTTCACCTAGATAATGATAC 58.783 38.462 0.00 0.00 45.48 2.24
5108 5800 7.071196 TGTGGCTTTCACCTAGATAATGATACT 59.929 37.037 0.00 0.00 45.48 2.12
5109 5801 8.585881 GTGGCTTTCACCTAGATAATGATACTA 58.414 37.037 0.00 0.00 40.39 1.82
5110 5802 9.326489 TGGCTTTCACCTAGATAATGATACTAT 57.674 33.333 0.00 0.00 0.00 2.12
5118 5810 9.649316 ACCTAGATAATGATACTATAGCTTCCC 57.351 37.037 0.00 0.00 0.00 3.97
5154 5846 1.752833 GTTGGTTCTCCGGTGAGGT 59.247 57.895 6.29 0.00 41.99 3.85
5230 5923 5.684704 ACTGACACAAGAAGAAAATCCAGA 58.315 37.500 0.00 0.00 0.00 3.86
5231 5924 6.302269 ACTGACACAAGAAGAAAATCCAGAT 58.698 36.000 0.00 0.00 0.00 2.90
5232 5925 7.453393 ACTGACACAAGAAGAAAATCCAGATA 58.547 34.615 0.00 0.00 0.00 1.98
5233 5926 7.389053 ACTGACACAAGAAGAAAATCCAGATAC 59.611 37.037 0.00 0.00 0.00 2.24
5234 5927 7.223584 TGACACAAGAAGAAAATCCAGATACA 58.776 34.615 0.00 0.00 0.00 2.29
5235 5928 7.884877 TGACACAAGAAGAAAATCCAGATACAT 59.115 33.333 0.00 0.00 0.00 2.29
5236 5929 8.048534 ACACAAGAAGAAAATCCAGATACATG 57.951 34.615 0.00 0.00 0.00 3.21
5237 5930 7.884877 ACACAAGAAGAAAATCCAGATACATGA 59.115 33.333 0.00 0.00 0.00 3.07
5238 5931 8.396390 CACAAGAAGAAAATCCAGATACATGAG 58.604 37.037 0.00 0.00 0.00 2.90
5239 5932 8.324306 ACAAGAAGAAAATCCAGATACATGAGA 58.676 33.333 0.00 0.00 0.00 3.27
5240 5933 9.170734 CAAGAAGAAAATCCAGATACATGAGAA 57.829 33.333 0.00 0.00 0.00 2.87
5241 5934 9.745018 AAGAAGAAAATCCAGATACATGAGAAA 57.255 29.630 0.00 0.00 0.00 2.52
5242 5935 9.917887 AGAAGAAAATCCAGATACATGAGAAAT 57.082 29.630 0.00 0.00 0.00 2.17
5245 5938 9.282569 AGAAAATCCAGATACATGAGAAATAGC 57.717 33.333 0.00 0.00 0.00 2.97
5246 5939 8.985315 AAAATCCAGATACATGAGAAATAGCA 57.015 30.769 0.00 0.00 0.00 3.49
5247 5940 8.985315 AAATCCAGATACATGAGAAATAGCAA 57.015 30.769 0.00 0.00 0.00 3.91
5248 5941 8.985315 AATCCAGATACATGAGAAATAGCAAA 57.015 30.769 0.00 0.00 0.00 3.68
5249 5942 8.985315 ATCCAGATACATGAGAAATAGCAAAA 57.015 30.769 0.00 0.00 0.00 2.44
5250 5943 8.442632 TCCAGATACATGAGAAATAGCAAAAG 57.557 34.615 0.00 0.00 0.00 2.27
5251 5944 8.267183 TCCAGATACATGAGAAATAGCAAAAGA 58.733 33.333 0.00 0.00 0.00 2.52
5252 5945 8.341173 CCAGATACATGAGAAATAGCAAAAGAC 58.659 37.037 0.00 0.00 0.00 3.01
5253 5946 8.060679 CAGATACATGAGAAATAGCAAAAGACG 58.939 37.037 0.00 0.00 0.00 4.18
5254 5947 7.981789 AGATACATGAGAAATAGCAAAAGACGA 59.018 33.333 0.00 0.00 0.00 4.20
5255 5948 6.992063 ACATGAGAAATAGCAAAAGACGAT 57.008 33.333 0.00 0.00 0.00 3.73
5256 5949 9.764363 ATACATGAGAAATAGCAAAAGACGATA 57.236 29.630 0.00 0.00 0.00 2.92
5257 5950 7.910304 ACATGAGAAATAGCAAAAGACGATAC 58.090 34.615 0.00 0.00 0.00 2.24
5258 5951 7.549134 ACATGAGAAATAGCAAAAGACGATACA 59.451 33.333 0.00 0.00 0.00 2.29
5259 5952 7.899178 TGAGAAATAGCAAAAGACGATACAA 57.101 32.000 0.00 0.00 0.00 2.41
5260 5953 8.317891 TGAGAAATAGCAAAAGACGATACAAA 57.682 30.769 0.00 0.00 0.00 2.83
5261 5954 8.946085 TGAGAAATAGCAAAAGACGATACAAAT 58.054 29.630 0.00 0.00 0.00 2.32
5264 5957 9.982291 GAAATAGCAAAAGACGATACAAATACA 57.018 29.630 0.00 0.00 0.00 2.29
5265 5958 9.769093 AAATAGCAAAAGACGATACAAATACAC 57.231 29.630 0.00 0.00 0.00 2.90
5266 5959 6.795098 AGCAAAAGACGATACAAATACACA 57.205 33.333 0.00 0.00 0.00 3.72
5267 5960 7.377766 AGCAAAAGACGATACAAATACACAT 57.622 32.000 0.00 0.00 0.00 3.21
5268 5961 8.487313 AGCAAAAGACGATACAAATACACATA 57.513 30.769 0.00 0.00 0.00 2.29
5269 5962 8.604035 AGCAAAAGACGATACAAATACACATAG 58.396 33.333 0.00 0.00 0.00 2.23
5270 5963 8.600625 GCAAAAGACGATACAAATACACATAGA 58.399 33.333 0.00 0.00 0.00 1.98
5272 5965 9.871238 AAAAGACGATACAAATACACATAGAGT 57.129 29.630 0.00 0.00 0.00 3.24
5273 5966 9.871238 AAAGACGATACAAATACACATAGAGTT 57.129 29.630 0.00 0.00 0.00 3.01
5274 5967 8.858003 AGACGATACAAATACACATAGAGTTG 57.142 34.615 0.00 0.00 0.00 3.16
5275 5968 8.467598 AGACGATACAAATACACATAGAGTTGT 58.532 33.333 0.00 0.00 33.94 3.32
5284 5977 3.925379 CACATAGAGTTGTGTAGTGGCA 58.075 45.455 0.00 0.00 41.65 4.92
5285 5978 4.314961 CACATAGAGTTGTGTAGTGGCAA 58.685 43.478 0.00 0.00 41.65 4.52
5286 5979 4.754618 CACATAGAGTTGTGTAGTGGCAAA 59.245 41.667 0.00 0.00 41.65 3.68
5287 5980 4.997395 ACATAGAGTTGTGTAGTGGCAAAG 59.003 41.667 0.00 0.00 0.00 2.77
5288 5981 2.222027 AGAGTTGTGTAGTGGCAAAGC 58.778 47.619 0.00 0.00 0.00 3.51
5289 5982 1.946768 GAGTTGTGTAGTGGCAAAGCA 59.053 47.619 0.00 0.00 0.00 3.91
5290 5983 2.357637 GAGTTGTGTAGTGGCAAAGCAA 59.642 45.455 0.00 0.00 0.00 3.91
5291 5984 2.099098 AGTTGTGTAGTGGCAAAGCAAC 59.901 45.455 11.21 11.21 36.12 4.17
5292 5985 2.051334 TGTGTAGTGGCAAAGCAACT 57.949 45.000 4.26 4.26 45.68 3.16
5293 5986 2.374184 TGTGTAGTGGCAAAGCAACTT 58.626 42.857 4.12 0.00 40.28 2.66
5294 5987 2.098934 TGTGTAGTGGCAAAGCAACTTG 59.901 45.455 4.12 0.00 40.28 3.16
5295 5988 2.357637 GTGTAGTGGCAAAGCAACTTGA 59.642 45.455 4.12 0.00 40.28 3.02
5296 5989 3.004734 GTGTAGTGGCAAAGCAACTTGAT 59.995 43.478 4.12 0.00 40.28 2.57
5297 5990 3.253188 TGTAGTGGCAAAGCAACTTGATC 59.747 43.478 4.12 0.00 40.28 2.92
5298 5991 1.267806 AGTGGCAAAGCAACTTGATCG 59.732 47.619 0.00 0.00 40.28 3.69
5299 5992 1.001378 GTGGCAAAGCAACTTGATCGT 60.001 47.619 0.00 0.00 28.38 3.73
5300 5993 1.001487 TGGCAAAGCAACTTGATCGTG 60.001 47.619 0.00 0.00 0.00 4.35
5301 5994 1.001378 GGCAAAGCAACTTGATCGTGT 60.001 47.619 0.00 0.00 0.00 4.49
5302 5995 2.046313 GCAAAGCAACTTGATCGTGTG 58.954 47.619 0.00 0.00 0.00 3.82
5303 5996 2.046313 CAAAGCAACTTGATCGTGTGC 58.954 47.619 0.00 3.10 0.00 4.57
5304 5997 0.235665 AAGCAACTTGATCGTGTGCG 59.764 50.000 0.00 0.00 39.92 5.34
5305 5998 0.880278 AGCAACTTGATCGTGTGCGT 60.880 50.000 0.00 0.00 39.49 5.24
5306 5999 0.722469 GCAACTTGATCGTGTGCGTG 60.722 55.000 0.00 0.00 39.49 5.34
5307 6000 0.722469 CAACTTGATCGTGTGCGTGC 60.722 55.000 0.00 0.00 39.49 5.34
5308 6001 1.157257 AACTTGATCGTGTGCGTGCA 61.157 50.000 0.00 0.00 39.49 4.57
5309 6002 1.154599 CTTGATCGTGTGCGTGCAC 60.155 57.895 17.72 17.72 46.33 4.57
5317 6010 2.798009 GTGCGTGCACAACAACCT 59.202 55.556 19.45 0.00 45.53 3.50
5318 6011 1.298339 GTGCGTGCACAACAACCTC 60.298 57.895 19.45 0.00 45.53 3.85
5319 6012 2.331451 GCGTGCACAACAACCTCC 59.669 61.111 18.64 0.00 0.00 4.30
5320 6013 2.186826 GCGTGCACAACAACCTCCT 61.187 57.895 18.64 0.00 0.00 3.69
5321 6014 1.648720 CGTGCACAACAACCTCCTG 59.351 57.895 18.64 0.00 0.00 3.86
5322 6015 1.095228 CGTGCACAACAACCTCCTGT 61.095 55.000 18.64 0.00 0.00 4.00
5323 6016 1.102978 GTGCACAACAACCTCCTGTT 58.897 50.000 13.17 0.00 40.17 3.16
5324 6017 1.476488 GTGCACAACAACCTCCTGTTT 59.524 47.619 13.17 0.00 37.43 2.83
5325 6018 2.094234 GTGCACAACAACCTCCTGTTTT 60.094 45.455 13.17 0.00 37.43 2.43
5326 6019 2.094286 TGCACAACAACCTCCTGTTTTG 60.094 45.455 0.00 0.00 39.11 2.44
5327 6020 2.738321 GCACAACAACCTCCTGTTTTGG 60.738 50.000 5.16 0.00 37.43 3.28
5328 6021 1.480545 ACAACAACCTCCTGTTTTGGC 59.519 47.619 0.00 0.00 37.43 4.52
5329 6022 1.756538 CAACAACCTCCTGTTTTGGCT 59.243 47.619 0.00 0.00 37.43 4.75
5330 6023 2.159179 ACAACCTCCTGTTTTGGCTT 57.841 45.000 0.00 0.00 34.00 4.35
5331 6024 2.466846 ACAACCTCCTGTTTTGGCTTT 58.533 42.857 0.00 0.00 34.00 3.51
5332 6025 2.168313 ACAACCTCCTGTTTTGGCTTTG 59.832 45.455 0.00 0.00 34.00 2.77
5333 6026 2.159179 ACCTCCTGTTTTGGCTTTGT 57.841 45.000 0.00 0.00 0.00 2.83
5334 6027 1.756538 ACCTCCTGTTTTGGCTTTGTG 59.243 47.619 0.00 0.00 0.00 3.33
5335 6028 1.538849 CCTCCTGTTTTGGCTTTGTGC 60.539 52.381 0.00 0.00 41.94 4.57
5336 6029 0.102120 TCCTGTTTTGGCTTTGTGCG 59.898 50.000 0.00 0.00 44.05 5.34
5337 6030 0.875474 CCTGTTTTGGCTTTGTGCGG 60.875 55.000 0.00 0.00 44.05 5.69
5338 6031 0.179113 CTGTTTTGGCTTTGTGCGGT 60.179 50.000 0.00 0.00 44.05 5.68
5339 6032 0.179124 TGTTTTGGCTTTGTGCGGTC 60.179 50.000 0.00 0.00 44.05 4.79
5340 6033 1.064946 TTTTGGCTTTGTGCGGTCG 59.935 52.632 0.00 0.00 44.05 4.79
5341 6034 2.945398 TTTTGGCTTTGTGCGGTCGC 62.945 55.000 8.54 8.54 44.05 5.19
5342 6035 4.927782 TGGCTTTGTGCGGTCGCT 62.928 61.111 16.36 0.00 44.05 4.93
5343 6036 4.389576 GGCTTTGTGCGGTCGCTG 62.390 66.667 16.36 3.40 44.05 5.18
5344 6037 3.649986 GCTTTGTGCGGTCGCTGT 61.650 61.111 16.36 0.00 42.51 4.40
5345 6038 2.551270 CTTTGTGCGGTCGCTGTC 59.449 61.111 16.36 7.64 42.51 3.51
5346 6039 1.956170 CTTTGTGCGGTCGCTGTCT 60.956 57.895 16.36 0.00 42.51 3.41
5347 6040 1.498865 CTTTGTGCGGTCGCTGTCTT 61.499 55.000 16.36 0.00 42.51 3.01
5348 6041 1.771073 TTTGTGCGGTCGCTGTCTTG 61.771 55.000 16.36 0.00 42.51 3.02
5349 6042 3.414700 GTGCGGTCGCTGTCTTGG 61.415 66.667 16.36 0.00 42.51 3.61
5350 6043 3.611674 TGCGGTCGCTGTCTTGGA 61.612 61.111 16.36 0.00 42.51 3.53
5351 6044 3.112709 GCGGTCGCTGTCTTGGAC 61.113 66.667 8.20 0.00 38.26 4.02
5352 6045 2.432628 CGGTCGCTGTCTTGGACC 60.433 66.667 0.00 0.00 45.34 4.46
5354 6047 4.771127 GTCGCTGTCTTGGACCAA 57.229 55.556 6.76 6.76 0.00 3.67
5355 6048 2.533318 GTCGCTGTCTTGGACCAAG 58.467 57.895 25.87 25.87 42.25 3.61
5356 6049 0.033504 GTCGCTGTCTTGGACCAAGA 59.966 55.000 29.45 29.45 46.50 3.02
5368 6061 2.100605 GACCAAGAGTCCACCATGAC 57.899 55.000 0.00 0.00 39.84 3.06
5369 6062 0.693049 ACCAAGAGTCCACCATGACC 59.307 55.000 0.00 0.00 35.83 4.02
5370 6063 0.035056 CCAAGAGTCCACCATGACCC 60.035 60.000 0.00 0.00 35.83 4.46
5371 6064 0.035056 CAAGAGTCCACCATGACCCC 60.035 60.000 0.00 0.00 35.83 4.95
5372 6065 0.178861 AAGAGTCCACCATGACCCCT 60.179 55.000 0.00 0.00 35.83 4.79
5373 6066 0.911525 AGAGTCCACCATGACCCCTG 60.912 60.000 0.00 0.00 35.83 4.45
5374 6067 1.151810 AGTCCACCATGACCCCTGT 60.152 57.895 0.00 0.00 35.83 4.00
5375 6068 0.772124 AGTCCACCATGACCCCTGTT 60.772 55.000 0.00 0.00 35.83 3.16
5376 6069 0.322546 GTCCACCATGACCCCTGTTC 60.323 60.000 0.00 0.00 0.00 3.18
5377 6070 0.770166 TCCACCATGACCCCTGTTCA 60.770 55.000 0.00 0.00 0.00 3.18
5378 6071 0.332632 CCACCATGACCCCTGTTCAT 59.667 55.000 0.00 0.00 0.00 2.57
5379 6072 1.683011 CCACCATGACCCCTGTTCATC 60.683 57.143 0.00 0.00 0.00 2.92
5380 6073 0.253044 ACCATGACCCCTGTTCATCG 59.747 55.000 0.00 0.00 0.00 3.84
5381 6074 0.253044 CCATGACCCCTGTTCATCGT 59.747 55.000 0.00 0.00 0.00 3.73
5382 6075 1.372582 CATGACCCCTGTTCATCGTG 58.627 55.000 0.00 0.00 0.00 4.35
5383 6076 0.253044 ATGACCCCTGTTCATCGTGG 59.747 55.000 0.00 0.00 0.00 4.94
5384 6077 1.745489 GACCCCTGTTCATCGTGGC 60.745 63.158 0.00 0.00 0.00 5.01
5385 6078 2.438434 CCCCTGTTCATCGTGGCC 60.438 66.667 0.00 0.00 0.00 5.36
5386 6079 2.350895 CCCTGTTCATCGTGGCCA 59.649 61.111 0.00 0.00 0.00 5.36
5387 6080 1.303236 CCCTGTTCATCGTGGCCAA 60.303 57.895 7.24 0.00 0.00 4.52
5388 6081 1.308069 CCCTGTTCATCGTGGCCAAG 61.308 60.000 7.24 10.64 0.00 3.61
5389 6082 1.308069 CCTGTTCATCGTGGCCAAGG 61.308 60.000 19.08 10.16 0.00 3.61
5390 6083 1.303236 TGTTCATCGTGGCCAAGGG 60.303 57.895 19.08 11.44 0.00 3.95
5391 6084 1.002624 GTTCATCGTGGCCAAGGGA 60.003 57.895 19.08 13.56 0.00 4.20
5392 6085 0.394352 GTTCATCGTGGCCAAGGGAT 60.394 55.000 19.08 13.46 0.00 3.85
5393 6086 1.134220 GTTCATCGTGGCCAAGGGATA 60.134 52.381 19.08 0.00 0.00 2.59
5394 6087 0.758734 TCATCGTGGCCAAGGGATAG 59.241 55.000 19.08 10.92 0.00 2.08
5395 6088 0.469917 CATCGTGGCCAAGGGATAGT 59.530 55.000 19.08 0.00 0.00 2.12
5396 6089 0.469917 ATCGTGGCCAAGGGATAGTG 59.530 55.000 19.08 0.00 0.00 2.74
5397 6090 0.907704 TCGTGGCCAAGGGATAGTGT 60.908 55.000 19.08 0.00 0.00 3.55
5398 6091 0.828022 CGTGGCCAAGGGATAGTGTA 59.172 55.000 7.24 0.00 0.00 2.90
5399 6092 1.472728 CGTGGCCAAGGGATAGTGTAC 60.473 57.143 7.24 0.00 0.00 2.90
5400 6093 0.828022 TGGCCAAGGGATAGTGTACG 59.172 55.000 0.61 0.00 0.00 3.67
5401 6094 0.532196 GGCCAAGGGATAGTGTACGC 60.532 60.000 0.00 0.00 0.00 4.42
5402 6095 0.874607 GCCAAGGGATAGTGTACGCG 60.875 60.000 3.53 3.53 0.00 6.01
5403 6096 0.742505 CCAAGGGATAGTGTACGCGA 59.257 55.000 15.93 0.00 0.00 5.87
5404 6097 1.269102 CCAAGGGATAGTGTACGCGAG 60.269 57.143 15.93 0.00 0.00 5.03
5405 6098 1.674441 CAAGGGATAGTGTACGCGAGA 59.326 52.381 15.93 0.00 0.00 4.04
5406 6099 1.595466 AGGGATAGTGTACGCGAGAG 58.405 55.000 15.93 0.00 0.00 3.20
5407 6100 1.140452 AGGGATAGTGTACGCGAGAGA 59.860 52.381 15.93 0.00 0.00 3.10
5408 6101 1.263752 GGGATAGTGTACGCGAGAGAC 59.736 57.143 15.93 9.18 0.00 3.36
5409 6102 1.263752 GGATAGTGTACGCGAGAGACC 59.736 57.143 15.93 1.70 0.00 3.85
5410 6103 1.938577 GATAGTGTACGCGAGAGACCA 59.061 52.381 15.93 0.00 0.00 4.02
5411 6104 1.812235 TAGTGTACGCGAGAGACCAA 58.188 50.000 15.93 0.00 0.00 3.67
5412 6105 0.956633 AGTGTACGCGAGAGACCAAA 59.043 50.000 15.93 0.00 0.00 3.28
5413 6106 1.068472 AGTGTACGCGAGAGACCAAAG 60.068 52.381 15.93 0.00 0.00 2.77
5414 6107 0.242825 TGTACGCGAGAGACCAAAGG 59.757 55.000 15.93 0.00 0.00 3.11
5415 6108 1.077089 GTACGCGAGAGACCAAAGGC 61.077 60.000 15.93 0.00 0.00 4.35
5416 6109 3.181967 CGCGAGAGACCAAAGGCG 61.182 66.667 0.00 0.00 37.56 5.52
5417 6110 2.815647 GCGAGAGACCAAAGGCGG 60.816 66.667 0.00 0.00 0.00 6.13
5418 6111 2.815647 CGAGAGACCAAAGGCGGC 60.816 66.667 0.00 0.00 0.00 6.53
5419 6112 2.347490 GAGAGACCAAAGGCGGCA 59.653 61.111 13.08 0.00 0.00 5.69
5420 6113 1.302511 GAGAGACCAAAGGCGGCAA 60.303 57.895 13.08 0.00 0.00 4.52
5421 6114 1.301677 GAGAGACCAAAGGCGGCAAG 61.302 60.000 13.08 0.00 0.00 4.01
5422 6115 1.600916 GAGACCAAAGGCGGCAAGT 60.601 57.895 13.08 1.84 0.00 3.16
5423 6116 1.856265 GAGACCAAAGGCGGCAAGTG 61.856 60.000 13.08 5.62 0.00 3.16
5424 6117 2.912025 ACCAAAGGCGGCAAGTGG 60.912 61.111 19.66 19.66 35.39 4.00
5425 6118 4.362476 CCAAAGGCGGCAAGTGGC 62.362 66.667 13.08 0.00 43.74 5.01
5435 6128 2.831597 GCAAGTGGCCAAAGATTGC 58.168 52.632 22.66 22.66 39.41 3.56
5436 6129 1.010419 GCAAGTGGCCAAAGATTGCG 61.010 55.000 22.66 3.86 37.16 4.85
5437 6130 0.597568 CAAGTGGCCAAAGATTGCGA 59.402 50.000 7.24 0.00 0.00 5.10
5438 6131 1.203052 CAAGTGGCCAAAGATTGCGAT 59.797 47.619 7.24 0.00 0.00 4.58
5439 6132 0.813184 AGTGGCCAAAGATTGCGATG 59.187 50.000 7.24 0.00 0.00 3.84
5440 6133 0.179129 GTGGCCAAAGATTGCGATGG 60.179 55.000 7.24 0.00 36.00 3.51
5441 6134 0.323269 TGGCCAAAGATTGCGATGGA 60.323 50.000 0.61 0.00 34.82 3.41
5442 6135 1.035139 GGCCAAAGATTGCGATGGAT 58.965 50.000 0.00 0.00 34.82 3.41
5443 6136 1.269413 GGCCAAAGATTGCGATGGATG 60.269 52.381 0.00 0.00 34.82 3.51
5444 6137 1.269413 GCCAAAGATTGCGATGGATGG 60.269 52.381 0.00 0.00 34.82 3.51
5445 6138 1.269413 CCAAAGATTGCGATGGATGGC 60.269 52.381 0.00 0.00 34.82 4.40
5446 6139 1.035139 AAAGATTGCGATGGATGGCC 58.965 50.000 0.00 0.00 0.00 5.36
5447 6140 1.168407 AAGATTGCGATGGATGGCCG 61.168 55.000 0.00 0.00 36.79 6.13
5448 6141 1.893808 GATTGCGATGGATGGCCGT 60.894 57.895 0.00 0.00 36.79 5.68
5449 6142 1.447317 GATTGCGATGGATGGCCGTT 61.447 55.000 0.00 0.00 36.79 4.44
5450 6143 1.037030 ATTGCGATGGATGGCCGTTT 61.037 50.000 0.00 0.00 36.79 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.569179 TTCTTTGTTGGAAGTGCCTATAAC 57.431 37.500 0.00 0.00 37.63 1.89
1 2 7.430441 GTTTTCTTTGTTGGAAGTGCCTATAA 58.570 34.615 0.00 0.00 37.63 0.98
2 3 6.293735 CGTTTTCTTTGTTGGAAGTGCCTATA 60.294 38.462 0.00 0.00 37.63 1.31
3 4 5.507315 CGTTTTCTTTGTTGGAAGTGCCTAT 60.507 40.000 0.00 0.00 37.63 2.57
4 5 4.201970 CGTTTTCTTTGTTGGAAGTGCCTA 60.202 41.667 0.00 0.00 37.63 3.93
5 6 3.428862 CGTTTTCTTTGTTGGAAGTGCCT 60.429 43.478 0.00 0.00 37.63 4.75
6 7 2.857748 CGTTTTCTTTGTTGGAAGTGCC 59.142 45.455 0.00 0.00 37.10 5.01
7 8 3.303229 CACGTTTTCTTTGTTGGAAGTGC 59.697 43.478 0.00 0.00 0.00 4.40
8 9 4.323336 CACACGTTTTCTTTGTTGGAAGTG 59.677 41.667 0.00 0.00 0.00 3.16
9 10 4.022676 ACACACGTTTTCTTTGTTGGAAGT 60.023 37.500 0.00 0.00 0.00 3.01
10 11 4.481463 ACACACGTTTTCTTTGTTGGAAG 58.519 39.130 0.00 0.00 0.00 3.46
11 12 4.477780 GACACACGTTTTCTTTGTTGGAA 58.522 39.130 0.00 0.00 0.00 3.53
12 13 3.119779 GGACACACGTTTTCTTTGTTGGA 60.120 43.478 0.00 0.00 0.00 3.53
13 14 3.175929 GGACACACGTTTTCTTTGTTGG 58.824 45.455 0.00 0.00 0.00 3.77
14 15 2.843643 CGGACACACGTTTTCTTTGTTG 59.156 45.455 0.00 0.00 0.00 3.33
15 16 2.485038 ACGGACACACGTTTTCTTTGTT 59.515 40.909 0.00 0.00 46.25 2.83
16 17 2.078392 ACGGACACACGTTTTCTTTGT 58.922 42.857 0.00 0.00 46.25 2.83
17 18 2.817538 ACGGACACACGTTTTCTTTG 57.182 45.000 0.00 0.00 46.25 2.77
26 27 1.705727 GGCGATAAACGGACACACG 59.294 57.895 0.00 0.00 42.83 4.49
27 28 1.705727 CGGCGATAAACGGACACAC 59.294 57.895 0.00 0.00 42.83 3.82
28 29 2.095847 GCGGCGATAAACGGACACA 61.096 57.895 12.98 0.00 42.83 3.72
29 30 2.699212 GCGGCGATAAACGGACAC 59.301 61.111 12.98 0.00 42.83 3.67
30 31 2.881827 CGCGGCGATAAACGGACA 60.882 61.111 19.16 0.00 42.83 4.02
31 32 1.139226 TAACGCGGCGATAAACGGAC 61.139 55.000 30.94 0.00 42.83 4.79
32 33 0.457509 TTAACGCGGCGATAAACGGA 60.458 50.000 30.94 2.91 42.83 4.69
33 34 0.314498 GTTAACGCGGCGATAAACGG 60.314 55.000 30.94 0.00 42.83 4.44
34 35 0.641783 AGTTAACGCGGCGATAAACG 59.358 50.000 30.94 6.71 45.66 3.60
35 36 1.922545 AGAGTTAACGCGGCGATAAAC 59.077 47.619 30.94 25.27 0.00 2.01
36 37 2.282701 AGAGTTAACGCGGCGATAAA 57.717 45.000 30.94 16.11 0.00 1.40
37 38 2.187707 GAAGAGTTAACGCGGCGATAA 58.812 47.619 30.94 24.39 0.00 1.75
38 39 1.132834 TGAAGAGTTAACGCGGCGATA 59.867 47.619 30.94 19.49 0.00 2.92
39 40 0.108992 TGAAGAGTTAACGCGGCGAT 60.109 50.000 30.94 20.73 0.00 4.58
40 41 1.005294 GTGAAGAGTTAACGCGGCGA 61.005 55.000 30.94 4.11 0.00 5.54
41 42 1.279527 TGTGAAGAGTTAACGCGGCG 61.280 55.000 22.36 22.36 0.00 6.46
42 43 0.163146 GTGTGAAGAGTTAACGCGGC 59.837 55.000 12.47 0.00 0.00 6.53
43 44 0.433492 CGTGTGAAGAGTTAACGCGG 59.567 55.000 12.47 0.00 42.45 6.46
44 45 3.901225 CGTGTGAAGAGTTAACGCG 57.099 52.632 3.53 3.53 40.82 6.01
46 47 0.179282 GCGCGTGTGAAGAGTTAACG 60.179 55.000 8.43 0.00 37.32 3.18
47 48 0.856641 TGCGCGTGTGAAGAGTTAAC 59.143 50.000 8.43 0.00 0.00 2.01
65 66 1.650912 GCAGTAATGATGCGCCCTG 59.349 57.895 4.18 0.58 33.31 4.45
393 412 3.055530 ACATCTCAAGATCCTTGCTCGTT 60.056 43.478 2.04 0.00 31.21 3.85
395 414 3.122297 GACATCTCAAGATCCTTGCTCG 58.878 50.000 2.04 0.00 31.21 5.03
398 417 2.863137 GACGACATCTCAAGATCCTTGC 59.137 50.000 2.04 0.00 31.21 4.01
436 457 1.513158 CTCCGGCGACATCTCAAGT 59.487 57.895 9.30 0.00 0.00 3.16
449 470 2.606108 GGCAATTTTTAACAGCTCCGG 58.394 47.619 0.00 0.00 0.00 5.14
468 489 0.462047 CGGGAACAAGAAGGGATCGG 60.462 60.000 0.00 0.00 0.00 4.18
492 789 4.610680 GCAATGTCGGGAATAAATACTCGC 60.611 45.833 0.00 0.00 0.00 5.03
493 790 4.750098 AGCAATGTCGGGAATAAATACTCG 59.250 41.667 0.00 0.00 0.00 4.18
494 791 5.758296 TCAGCAATGTCGGGAATAAATACTC 59.242 40.000 0.00 0.00 0.00 2.59
594 901 1.492599 CCTCTGAATTCCCTTCCTCCC 59.507 57.143 2.27 0.00 32.49 4.30
595 902 1.133945 GCCTCTGAATTCCCTTCCTCC 60.134 57.143 2.27 0.00 32.49 4.30
596 903 1.133945 GGCCTCTGAATTCCCTTCCTC 60.134 57.143 2.27 0.00 32.49 3.71
649 964 2.676471 CACGGGGAGCCAAAAGGG 60.676 66.667 0.00 0.00 40.85 3.95
701 1016 2.290323 CCCGTCTGGACCTTTGAATTCT 60.290 50.000 7.05 0.00 37.49 2.40
738 1054 2.667470 GTGGAGGGACTAGTATGCAGA 58.333 52.381 0.00 0.00 41.55 4.26
739 1055 1.689273 GGTGGAGGGACTAGTATGCAG 59.311 57.143 0.00 0.00 41.55 4.41
740 1056 1.691482 GGGTGGAGGGACTAGTATGCA 60.691 57.143 0.00 0.00 41.55 3.96
816 1135 0.517316 GGGTGTGAAGTAAGCAAGCG 59.483 55.000 0.00 0.00 0.00 4.68
835 1154 3.398353 GAAGACGAGGCCGACGAGG 62.398 68.421 26.51 4.57 44.97 4.63
860 1179 4.594854 TTCGCTTGGCTTGCCCCA 62.595 61.111 9.35 0.00 0.00 4.96
895 1224 2.742372 TTCTTCTTGGCTCGGCGC 60.742 61.111 0.00 0.00 38.13 6.53
896 1225 2.744768 GCTTCTTCTTGGCTCGGCG 61.745 63.158 0.00 0.00 0.00 6.46
973 1307 3.181440 TGCCCTCCTGAATAATCATGGAC 60.181 47.826 0.00 0.00 34.37 4.02
977 1311 3.494332 GCTTGCCCTCCTGAATAATCAT 58.506 45.455 0.00 0.00 34.37 2.45
978 1312 2.423373 GGCTTGCCCTCCTGAATAATCA 60.423 50.000 0.00 0.00 0.00 2.57
979 1313 2.234143 GGCTTGCCCTCCTGAATAATC 58.766 52.381 0.00 0.00 0.00 1.75
982 1316 1.133699 CATGGCTTGCCCTCCTGAATA 60.134 52.381 9.35 0.00 0.00 1.75
996 1333 2.285969 AGCAGGGGAGACATGGCT 60.286 61.111 0.00 0.00 0.00 4.75
1084 1421 2.093235 CGCCCCAAGAAGAGAAGAAGAT 60.093 50.000 0.00 0.00 0.00 2.40
1108 1458 2.393768 CCACGCGCAATTCAGCTCT 61.394 57.895 5.73 0.00 0.00 4.09
1144 1494 3.056107 CACCTTCAAGAGTAATCGACCCA 60.056 47.826 0.00 0.00 0.00 4.51
1154 1504 1.674057 CCGCCTCACCTTCAAGAGT 59.326 57.895 0.00 0.00 0.00 3.24
1263 1623 3.379445 CCTGCCACCCGTCGTAGT 61.379 66.667 0.00 0.00 0.00 2.73
1377 1745 0.600255 CGAGAAGTTGCCGAACACCT 60.600 55.000 0.00 0.00 34.17 4.00
1380 1748 2.307309 CGCGAGAAGTTGCCGAACA 61.307 57.895 0.00 0.00 34.17 3.18
1431 1799 2.700773 GGGCCGTTGATGGAGTTGC 61.701 63.158 0.00 0.00 0.00 4.17
1522 1894 3.068691 CCGGAGAGGTTGAGCGGA 61.069 66.667 0.00 0.00 34.51 5.54
1629 2027 1.367840 GTGGACAGGTCGAGCAAGT 59.632 57.895 18.15 14.61 0.00 3.16
1750 2148 3.694072 TGAATTCCCTGAATTTCGCGATT 59.306 39.130 10.88 0.82 41.56 3.34
2330 2733 3.443925 CTGGAGCTCGGCGAGACA 61.444 66.667 38.56 28.84 0.00 3.41
2353 2756 1.687123 AGCGTGTTGTTAGACAGGTCT 59.313 47.619 7.18 7.18 43.40 3.85
2401 2804 1.135083 CATAGGAGCGACGTGAGGTTT 60.135 52.381 0.00 0.00 0.00 3.27
3017 3471 2.772287 GGAGAGGTTGTTGAAGGACAG 58.228 52.381 0.00 0.00 0.00 3.51
3079 3533 3.001533 GGTTGTACGACACGTTGAACATT 59.998 43.478 15.21 0.00 41.54 2.71
3094 3548 0.531200 CGGAGAGGAGTGGGTTGTAC 59.469 60.000 0.00 0.00 0.00 2.90
3184 3638 1.001641 AGCTCCACCCTGATGCAAC 60.002 57.895 0.00 0.00 0.00 4.17
3238 3692 2.811317 GTCCGAACTGCAGGAGCG 60.811 66.667 19.93 17.21 46.23 5.03
3268 3722 0.250081 GCCAGATCCCGATGGTTCTC 60.250 60.000 1.12 0.00 38.41 2.87
3279 3733 1.387539 GGAGAAAAGCAGCCAGATCC 58.612 55.000 0.00 0.00 0.00 3.36
3280 3734 1.064832 AGGGAGAAAAGCAGCCAGATC 60.065 52.381 0.00 0.00 0.00 2.75
3283 3737 1.023513 CGAGGGAGAAAAGCAGCCAG 61.024 60.000 0.00 0.00 0.00 4.85
3389 3843 2.397252 GTGCTCGCACGAGAATGC 59.603 61.111 23.33 9.45 44.53 3.56
3523 3983 0.866061 CGATGTCGCGGTAGGTGAAG 60.866 60.000 6.13 0.00 36.80 3.02
4078 4538 3.061231 TACTCCGGCGCCACGTAA 61.061 61.111 28.98 5.33 0.00 3.18
4123 4583 1.703438 CGTAGCTGTAGACGTCGCCT 61.703 60.000 10.46 5.89 34.39 5.52
4132 4592 1.586564 GAGCACGCCGTAGCTGTAG 60.587 63.158 16.65 0.00 42.04 2.74
4198 4658 4.148825 GCCCAGTCGACGAGGCAT 62.149 66.667 33.60 6.94 45.07 4.40
4498 4961 1.953686 GCCCAGCTGAACTAAACAACA 59.046 47.619 17.39 0.00 0.00 3.33
4542 5005 7.347448 CAAAACTTTGCTTCTTTATCTTTGCC 58.653 34.615 0.00 0.00 0.00 4.52
4612 5092 2.592102 AGCATATGTTAGGGGCCATG 57.408 50.000 4.39 0.00 0.00 3.66
4613 5093 4.953781 AATAGCATATGTTAGGGGCCAT 57.046 40.909 4.39 0.00 0.00 4.40
4624 5104 9.404348 CACGATATAGGAAGCTAATAGCATATG 57.596 37.037 15.28 0.00 45.56 1.78
4640 5120 6.085555 ACATCACCTACAACACGATATAGG 57.914 41.667 0.00 0.00 40.16 2.57
4648 5128 5.118203 GTCTCGTTAACATCACCTACAACAC 59.882 44.000 6.39 0.00 0.00 3.32
4649 5129 5.221283 TGTCTCGTTAACATCACCTACAACA 60.221 40.000 6.39 0.00 0.00 3.33
4651 5131 5.456548 TGTCTCGTTAACATCACCTACAA 57.543 39.130 6.39 0.00 0.00 2.41
4653 5133 5.867716 ACAATGTCTCGTTAACATCACCTAC 59.132 40.000 6.39 0.00 36.35 3.18
4654 5134 6.032956 ACAATGTCTCGTTAACATCACCTA 57.967 37.500 6.39 0.00 36.35 3.08
4655 5135 4.894784 ACAATGTCTCGTTAACATCACCT 58.105 39.130 6.39 0.00 36.35 4.00
4656 5136 5.636121 TGTACAATGTCTCGTTAACATCACC 59.364 40.000 6.39 0.00 36.35 4.02
4660 5140 6.452242 TCAGTGTACAATGTCTCGTTAACAT 58.548 36.000 21.56 0.00 38.98 2.71
4662 5142 6.946229 ATCAGTGTACAATGTCTCGTTAAC 57.054 37.500 21.56 0.00 0.00 2.01
4692 5172 1.670087 CGTTCTGACCAATGACTCGCT 60.670 52.381 0.00 0.00 0.00 4.93
4695 5175 2.086054 AGCGTTCTGACCAATGACTC 57.914 50.000 0.00 0.00 0.00 3.36
4698 5178 4.159693 ACACTATAGCGTTCTGACCAATGA 59.840 41.667 0.00 0.00 0.00 2.57
4703 5183 4.897025 AGTACACTATAGCGTTCTGACC 57.103 45.455 0.00 0.00 0.00 4.02
4704 5184 7.745594 GCTAATAGTACACTATAGCGTTCTGAC 59.254 40.741 9.55 0.00 38.15 3.51
4706 5186 6.737301 CGCTAATAGTACACTATAGCGTTCTG 59.263 42.308 25.27 0.00 43.67 3.02
4708 5188 6.735957 GTCGCTAATAGTACACTATAGCGTTC 59.264 42.308 28.21 23.12 45.62 3.95
4712 5192 6.895898 TGTGTCGCTAATAGTACACTATAGC 58.104 40.000 20.46 10.09 42.12 2.97
4766 5248 6.246420 AGCATAAGTGACAAAAGCAAGTAG 57.754 37.500 0.00 0.00 0.00 2.57
4768 5250 5.520376 AAGCATAAGTGACAAAAGCAAGT 57.480 34.783 0.00 0.00 0.00 3.16
4770 5252 6.446318 CCTAAAGCATAAGTGACAAAAGCAA 58.554 36.000 0.00 0.00 0.00 3.91
4771 5253 5.564651 GCCTAAAGCATAAGTGACAAAAGCA 60.565 40.000 0.00 0.00 42.97 3.91
4772 5254 4.859245 GCCTAAAGCATAAGTGACAAAAGC 59.141 41.667 0.00 0.00 42.97 3.51
4773 5255 5.183904 AGGCCTAAAGCATAAGTGACAAAAG 59.816 40.000 1.29 0.00 46.50 2.27
4774 5256 5.076873 AGGCCTAAAGCATAAGTGACAAAA 58.923 37.500 1.29 0.00 46.50 2.44
4775 5257 4.662278 AGGCCTAAAGCATAAGTGACAAA 58.338 39.130 1.29 0.00 46.50 2.83
4777 5259 3.263170 TGAGGCCTAAAGCATAAGTGACA 59.737 43.478 4.42 0.00 46.50 3.58
4778 5260 3.873910 TGAGGCCTAAAGCATAAGTGAC 58.126 45.455 4.42 0.00 46.50 3.67
4798 5281 1.257936 CGCTTCGACCGTTGGATATTG 59.742 52.381 0.00 0.00 0.00 1.90
4799 5282 1.134907 ACGCTTCGACCGTTGGATATT 60.135 47.619 4.62 0.00 34.96 1.28
4810 5293 0.091344 CAATGACGACACGCTTCGAC 59.909 55.000 12.76 7.41 41.78 4.20
4813 5296 2.663279 AAACAATGACGACACGCTTC 57.337 45.000 0.00 0.00 0.00 3.86
4814 5297 2.222445 GGTAAACAATGACGACACGCTT 59.778 45.455 0.00 0.00 0.00 4.68
4816 5299 1.136169 GGGTAAACAATGACGACACGC 60.136 52.381 0.00 0.00 0.00 5.34
4817 5300 1.461897 GGGGTAAACAATGACGACACG 59.538 52.381 0.00 0.00 0.00 4.49
4818 5301 1.808343 GGGGGTAAACAATGACGACAC 59.192 52.381 0.00 0.00 0.00 3.67
4819 5302 2.188062 GGGGGTAAACAATGACGACA 57.812 50.000 0.00 0.00 0.00 4.35
4844 5327 1.346722 GGACGAAGAACTGAGGGGAAA 59.653 52.381 0.00 0.00 0.00 3.13
4845 5328 0.974383 GGACGAAGAACTGAGGGGAA 59.026 55.000 0.00 0.00 0.00 3.97
4846 5329 0.114560 AGGACGAAGAACTGAGGGGA 59.885 55.000 0.00 0.00 0.00 4.81
4847 5330 0.533032 GAGGACGAAGAACTGAGGGG 59.467 60.000 0.00 0.00 0.00 4.79
4848 5331 0.533032 GGAGGACGAAGAACTGAGGG 59.467 60.000 0.00 0.00 0.00 4.30
4849 5332 1.551452 AGGAGGACGAAGAACTGAGG 58.449 55.000 0.00 0.00 0.00 3.86
4850 5333 3.257127 AGAAAGGAGGACGAAGAACTGAG 59.743 47.826 0.00 0.00 0.00 3.35
4851 5334 3.231818 AGAAAGGAGGACGAAGAACTGA 58.768 45.455 0.00 0.00 0.00 3.41
4852 5335 3.580731 GAGAAAGGAGGACGAAGAACTG 58.419 50.000 0.00 0.00 0.00 3.16
4853 5336 2.229302 CGAGAAAGGAGGACGAAGAACT 59.771 50.000 0.00 0.00 0.00 3.01
4854 5337 2.597520 CGAGAAAGGAGGACGAAGAAC 58.402 52.381 0.00 0.00 0.00 3.01
4855 5338 1.067776 GCGAGAAAGGAGGACGAAGAA 60.068 52.381 0.00 0.00 0.00 2.52
4856 5339 0.526662 GCGAGAAAGGAGGACGAAGA 59.473 55.000 0.00 0.00 0.00 2.87
4857 5340 0.798771 CGCGAGAAAGGAGGACGAAG 60.799 60.000 0.00 0.00 0.00 3.79
4858 5341 1.211969 CGCGAGAAAGGAGGACGAA 59.788 57.895 0.00 0.00 0.00 3.85
4859 5342 2.697761 CCGCGAGAAAGGAGGACGA 61.698 63.158 8.23 0.00 0.00 4.20
4860 5343 2.202623 CCGCGAGAAAGGAGGACG 60.203 66.667 8.23 0.00 0.00 4.79
4861 5344 2.509561 GCCGCGAGAAAGGAGGAC 60.510 66.667 8.23 0.00 0.00 3.85
4862 5345 4.129737 CGCCGCGAGAAAGGAGGA 62.130 66.667 8.23 0.00 0.00 3.71
4864 5347 3.934391 AACCGCCGCGAGAAAGGAG 62.934 63.158 15.93 0.00 0.00 3.69
4865 5348 3.927163 GAACCGCCGCGAGAAAGGA 62.927 63.158 15.93 0.00 0.00 3.36
4866 5349 3.488090 GAACCGCCGCGAGAAAGG 61.488 66.667 15.93 5.66 0.00 3.11
4867 5350 1.956620 GAAGAACCGCCGCGAGAAAG 61.957 60.000 15.93 0.00 0.00 2.62
4868 5351 2.025418 GAAGAACCGCCGCGAGAAA 61.025 57.895 15.93 0.00 0.00 2.52
4869 5352 2.431942 GAAGAACCGCCGCGAGAA 60.432 61.111 15.93 0.00 0.00 2.87
4870 5353 4.430765 GGAAGAACCGCCGCGAGA 62.431 66.667 15.93 0.00 0.00 4.04
4871 5354 4.436998 AGGAAGAACCGCCGCGAG 62.437 66.667 15.93 7.04 44.74 5.03
4872 5355 4.735132 CAGGAAGAACCGCCGCGA 62.735 66.667 15.93 0.00 44.74 5.87
4875 5358 2.815647 GAGCAGGAAGAACCGCCG 60.816 66.667 0.00 0.00 44.74 6.46
4876 5359 2.436824 GGAGCAGGAAGAACCGCC 60.437 66.667 0.00 0.00 44.74 6.13
4911 5603 1.883084 GATGGAGGCACGCGGTTAG 60.883 63.158 12.47 0.00 0.00 2.34
4913 5605 4.778143 GGATGGAGGCACGCGGTT 62.778 66.667 12.47 0.00 0.00 4.44
4919 5611 2.187946 CACGAGGGATGGAGGCAC 59.812 66.667 0.00 0.00 0.00 5.01
4958 5650 3.308705 GGTATAGGTCGGGGCGGG 61.309 72.222 0.00 0.00 0.00 6.13
4959 5651 3.308705 GGGTATAGGTCGGGGCGG 61.309 72.222 0.00 0.00 0.00 6.13
4960 5652 3.677648 CGGGTATAGGTCGGGGCG 61.678 72.222 0.00 0.00 0.00 6.13
4961 5653 3.999948 GCGGGTATAGGTCGGGGC 62.000 72.222 0.00 0.00 0.00 5.80
4962 5654 2.522436 TGCGGGTATAGGTCGGGG 60.522 66.667 0.00 0.00 0.00 5.73
4963 5655 1.397390 AACTGCGGGTATAGGTCGGG 61.397 60.000 0.00 0.00 0.00 5.14
4964 5656 0.249322 CAACTGCGGGTATAGGTCGG 60.249 60.000 0.00 0.00 0.00 4.79
4965 5657 0.458669 ACAACTGCGGGTATAGGTCG 59.541 55.000 0.00 0.00 0.00 4.79
4966 5658 4.056050 CAATACAACTGCGGGTATAGGTC 58.944 47.826 0.00 0.00 30.37 3.85
4967 5659 3.181458 CCAATACAACTGCGGGTATAGGT 60.181 47.826 0.00 0.00 30.37 3.08
4971 5663 2.740580 CGACCAATACAACTGCGGGTAT 60.741 50.000 0.00 0.00 0.00 2.73
4972 5664 1.404449 CGACCAATACAACTGCGGGTA 60.404 52.381 0.00 0.00 0.00 3.69
4981 5673 2.437002 GGGCGGCGACCAATACAA 60.437 61.111 30.45 0.00 0.00 2.41
5026 5718 1.804748 GGGTCGTTGGAGTTGTTCATC 59.195 52.381 0.00 0.00 0.00 2.92
5039 5731 3.637273 GAGGTGCAGGGGGTCGTT 61.637 66.667 0.00 0.00 0.00 3.85
5092 5784 9.649316 GGGAAGCTATAGTATCATTATCTAGGT 57.351 37.037 0.84 0.00 0.00 3.08
5093 5785 9.875708 AGGGAAGCTATAGTATCATTATCTAGG 57.124 37.037 0.84 0.00 0.00 3.02
5110 5802 8.429641 CCACACTATCTATTTTAAGGGAAGCTA 58.570 37.037 0.00 0.00 0.00 3.32
5111 5803 7.092399 ACCACACTATCTATTTTAAGGGAAGCT 60.092 37.037 0.00 0.00 0.00 3.74
5118 5810 9.449719 AGAACCAACCACACTATCTATTTTAAG 57.550 33.333 0.00 0.00 0.00 1.85
5132 5824 1.147376 CACCGGAGAACCAACCACA 59.853 57.895 9.46 0.00 35.59 4.17
5172 5864 1.687494 CCTTTCTTCTTCCGAGCGCG 61.687 60.000 0.00 0.00 37.24 6.86
5213 5906 8.324306 TCTCATGTATCTGGATTTTCTTCTTGT 58.676 33.333 0.00 0.00 0.00 3.16
5230 5923 8.668510 ATCGTCTTTTGCTATTTCTCATGTAT 57.331 30.769 0.00 0.00 0.00 2.29
5231 5924 9.031360 GTATCGTCTTTTGCTATTTCTCATGTA 57.969 33.333 0.00 0.00 0.00 2.29
5232 5925 6.992063 ATCGTCTTTTGCTATTTCTCATGT 57.008 33.333 0.00 0.00 0.00 3.21
5233 5926 7.909267 TGTATCGTCTTTTGCTATTTCTCATG 58.091 34.615 0.00 0.00 0.00 3.07
5234 5927 8.492673 TTGTATCGTCTTTTGCTATTTCTCAT 57.507 30.769 0.00 0.00 0.00 2.90
5235 5928 7.899178 TTGTATCGTCTTTTGCTATTTCTCA 57.101 32.000 0.00 0.00 0.00 3.27
5238 5931 9.982291 TGTATTTGTATCGTCTTTTGCTATTTC 57.018 29.630 0.00 0.00 0.00 2.17
5239 5932 9.769093 GTGTATTTGTATCGTCTTTTGCTATTT 57.231 29.630 0.00 0.00 0.00 1.40
5240 5933 8.941977 TGTGTATTTGTATCGTCTTTTGCTATT 58.058 29.630 0.00 0.00 0.00 1.73
5241 5934 8.487313 TGTGTATTTGTATCGTCTTTTGCTAT 57.513 30.769 0.00 0.00 0.00 2.97
5242 5935 7.892778 TGTGTATTTGTATCGTCTTTTGCTA 57.107 32.000 0.00 0.00 0.00 3.49
5243 5936 6.795098 TGTGTATTTGTATCGTCTTTTGCT 57.205 33.333 0.00 0.00 0.00 3.91
5244 5937 8.600625 TCTATGTGTATTTGTATCGTCTTTTGC 58.399 33.333 0.00 0.00 0.00 3.68
5246 5939 9.871238 ACTCTATGTGTATTTGTATCGTCTTTT 57.129 29.630 0.00 0.00 0.00 2.27
5247 5940 9.871238 AACTCTATGTGTATTTGTATCGTCTTT 57.129 29.630 0.00 0.00 0.00 2.52
5248 5941 9.302345 CAACTCTATGTGTATTTGTATCGTCTT 57.698 33.333 0.00 0.00 0.00 3.01
5249 5942 8.467598 ACAACTCTATGTGTATTTGTATCGTCT 58.532 33.333 0.00 0.00 30.82 4.18
5250 5943 8.532341 CACAACTCTATGTGTATTTGTATCGTC 58.468 37.037 0.00 0.00 44.46 4.20
5251 5944 8.407457 CACAACTCTATGTGTATTTGTATCGT 57.593 34.615 0.00 0.00 44.46 3.73
5264 5957 4.617253 TTGCCACTACACAACTCTATGT 57.383 40.909 0.00 0.00 0.00 2.29
5265 5958 4.142816 GCTTTGCCACTACACAACTCTATG 60.143 45.833 0.00 0.00 0.00 2.23
5266 5959 4.003648 GCTTTGCCACTACACAACTCTAT 58.996 43.478 0.00 0.00 0.00 1.98
5267 5960 3.181459 TGCTTTGCCACTACACAACTCTA 60.181 43.478 0.00 0.00 0.00 2.43
5268 5961 2.222027 GCTTTGCCACTACACAACTCT 58.778 47.619 0.00 0.00 0.00 3.24
5269 5962 1.946768 TGCTTTGCCACTACACAACTC 59.053 47.619 0.00 0.00 0.00 3.01
5270 5963 2.051334 TGCTTTGCCACTACACAACT 57.949 45.000 0.00 0.00 0.00 3.16
5271 5964 2.099098 AGTTGCTTTGCCACTACACAAC 59.901 45.455 0.00 0.00 32.73 3.32
5272 5965 2.374184 AGTTGCTTTGCCACTACACAA 58.626 42.857 0.00 0.00 32.73 3.33
5273 5966 2.051334 AGTTGCTTTGCCACTACACA 57.949 45.000 0.00 0.00 32.73 3.72
5274 5967 2.357637 TCAAGTTGCTTTGCCACTACAC 59.642 45.455 0.00 0.00 33.36 2.90
5275 5968 2.649190 TCAAGTTGCTTTGCCACTACA 58.351 42.857 0.00 0.00 33.36 2.74
5276 5969 3.667960 CGATCAAGTTGCTTTGCCACTAC 60.668 47.826 0.00 0.00 33.36 2.73
5277 5970 2.483877 CGATCAAGTTGCTTTGCCACTA 59.516 45.455 0.00 0.00 33.36 2.74
5278 5971 1.267806 CGATCAAGTTGCTTTGCCACT 59.732 47.619 0.00 0.00 36.06 4.00
5279 5972 1.001378 ACGATCAAGTTGCTTTGCCAC 60.001 47.619 0.00 0.00 0.00 5.01
5280 5973 1.001487 CACGATCAAGTTGCTTTGCCA 60.001 47.619 0.00 0.00 0.00 4.92
5281 5974 1.001378 ACACGATCAAGTTGCTTTGCC 60.001 47.619 0.00 0.00 0.00 4.52
5282 5975 2.046313 CACACGATCAAGTTGCTTTGC 58.954 47.619 0.00 0.00 0.00 3.68
5283 5976 2.046313 GCACACGATCAAGTTGCTTTG 58.954 47.619 0.00 0.00 0.00 2.77
5284 5977 1.334059 CGCACACGATCAAGTTGCTTT 60.334 47.619 0.00 0.00 43.93 3.51
5285 5978 0.235665 CGCACACGATCAAGTTGCTT 59.764 50.000 0.00 0.00 43.93 3.91
5286 5979 0.880278 ACGCACACGATCAAGTTGCT 60.880 50.000 0.00 0.00 43.93 3.91
5287 5980 0.722469 CACGCACACGATCAAGTTGC 60.722 55.000 0.00 0.00 43.93 4.17
5288 5981 0.722469 GCACGCACACGATCAAGTTG 60.722 55.000 0.00 0.00 43.93 3.16
5289 5982 1.157257 TGCACGCACACGATCAAGTT 61.157 50.000 0.00 0.00 43.93 2.66
5290 5983 1.594021 TGCACGCACACGATCAAGT 60.594 52.632 0.00 0.00 43.93 3.16
5291 5984 1.154599 GTGCACGCACACGATCAAG 60.155 57.895 17.03 0.00 45.53 3.02
5292 5985 2.935191 GTGCACGCACACGATCAA 59.065 55.556 17.03 0.00 45.53 2.57
5300 5993 1.298339 GAGGTTGTTGTGCACGCAC 60.298 57.895 15.20 15.20 46.33 5.34
5301 5994 2.477176 GGAGGTTGTTGTGCACGCA 61.477 57.895 13.13 11.06 0.00 5.24
5302 5995 2.186826 AGGAGGTTGTTGTGCACGC 61.187 57.895 13.13 8.33 0.00 5.34
5303 5996 1.095228 ACAGGAGGTTGTTGTGCACG 61.095 55.000 13.13 0.00 0.00 5.34
5304 5997 1.102978 AACAGGAGGTTGTTGTGCAC 58.897 50.000 10.75 10.75 39.68 4.57
5305 5998 1.846007 AAACAGGAGGTTGTTGTGCA 58.154 45.000 0.00 0.00 40.24 4.57
5306 5999 2.539476 CAAAACAGGAGGTTGTTGTGC 58.461 47.619 0.00 0.00 38.90 4.57
5307 6000 2.738321 GCCAAAACAGGAGGTTGTTGTG 60.738 50.000 2.77 2.77 43.06 3.33
5308 6001 1.480545 GCCAAAACAGGAGGTTGTTGT 59.519 47.619 0.00 0.00 40.24 3.32
5309 6002 1.756538 AGCCAAAACAGGAGGTTGTTG 59.243 47.619 0.00 0.00 40.24 3.33
5310 6003 2.159179 AGCCAAAACAGGAGGTTGTT 57.841 45.000 0.00 0.00 42.82 2.83
5311 6004 2.159179 AAGCCAAAACAGGAGGTTGT 57.841 45.000 0.00 0.00 40.35 3.32
5312 6005 2.168313 ACAAAGCCAAAACAGGAGGTTG 59.832 45.455 0.00 0.00 40.35 3.77
5313 6006 2.168313 CACAAAGCCAAAACAGGAGGTT 59.832 45.455 0.00 0.00 42.98 3.50
5314 6007 1.756538 CACAAAGCCAAAACAGGAGGT 59.243 47.619 0.00 0.00 0.00 3.85
5315 6008 1.538849 GCACAAAGCCAAAACAGGAGG 60.539 52.381 0.00 0.00 37.23 4.30
5316 6009 1.856802 GCACAAAGCCAAAACAGGAG 58.143 50.000 0.00 0.00 37.23 3.69
5317 6010 0.102120 CGCACAAAGCCAAAACAGGA 59.898 50.000 0.00 0.00 41.38 3.86
5318 6011 0.875474 CCGCACAAAGCCAAAACAGG 60.875 55.000 0.00 0.00 41.38 4.00
5319 6012 0.179113 ACCGCACAAAGCCAAAACAG 60.179 50.000 0.00 0.00 41.38 3.16
5320 6013 0.179124 GACCGCACAAAGCCAAAACA 60.179 50.000 0.00 0.00 41.38 2.83
5321 6014 1.206115 CGACCGCACAAAGCCAAAAC 61.206 55.000 0.00 0.00 41.38 2.43
5322 6015 1.064946 CGACCGCACAAAGCCAAAA 59.935 52.632 0.00 0.00 41.38 2.44
5323 6016 2.718731 CGACCGCACAAAGCCAAA 59.281 55.556 0.00 0.00 41.38 3.28
5324 6017 3.959975 GCGACCGCACAAAGCCAA 61.960 61.111 9.73 0.00 41.38 4.52
5325 6018 4.927782 AGCGACCGCACAAAGCCA 62.928 61.111 16.97 0.00 44.88 4.75
5326 6019 4.389576 CAGCGACCGCACAAAGCC 62.390 66.667 16.97 0.00 44.88 4.35
5327 6020 3.579626 GACAGCGACCGCACAAAGC 62.580 63.158 16.97 0.00 44.88 3.51
5328 6021 1.498865 AAGACAGCGACCGCACAAAG 61.499 55.000 16.97 3.66 44.88 2.77
5329 6022 1.522806 AAGACAGCGACCGCACAAA 60.523 52.632 16.97 0.00 44.88 2.83
5330 6023 2.108157 AAGACAGCGACCGCACAA 59.892 55.556 16.97 0.00 44.88 3.33
5331 6024 2.661537 CAAGACAGCGACCGCACA 60.662 61.111 16.97 0.00 44.88 4.57
5332 6025 3.414700 CCAAGACAGCGACCGCAC 61.415 66.667 16.97 7.52 44.88 5.34
5333 6026 3.611674 TCCAAGACAGCGACCGCA 61.612 61.111 16.97 0.00 44.88 5.69
5334 6027 3.112709 GTCCAAGACAGCGACCGC 61.113 66.667 6.25 6.25 42.33 5.68
5335 6028 2.432628 GGTCCAAGACAGCGACCG 60.433 66.667 0.00 0.00 36.97 4.79
5336 6029 0.951040 CTTGGTCCAAGACAGCGACC 60.951 60.000 25.15 0.00 43.42 4.79
5337 6030 0.033504 TCTTGGTCCAAGACAGCGAC 59.966 55.000 27.39 0.00 44.27 5.19
5338 6031 0.318441 CTCTTGGTCCAAGACAGCGA 59.682 55.000 27.39 9.20 44.27 4.93
5339 6032 0.034059 ACTCTTGGTCCAAGACAGCG 59.966 55.000 27.39 20.17 44.27 5.18
5340 6033 1.802069 GACTCTTGGTCCAAGACAGC 58.198 55.000 27.39 16.35 44.27 4.40
5349 6042 1.339151 GGTCATGGTGGACTCTTGGTC 60.339 57.143 0.00 0.00 43.79 4.02
5350 6043 0.693049 GGTCATGGTGGACTCTTGGT 59.307 55.000 0.00 0.00 37.91 3.67
5351 6044 0.035056 GGGTCATGGTGGACTCTTGG 60.035 60.000 0.00 0.00 35.34 3.61
5352 6045 0.035056 GGGGTCATGGTGGACTCTTG 60.035 60.000 0.00 0.00 38.37 3.02
5353 6046 0.178861 AGGGGTCATGGTGGACTCTT 60.179 55.000 0.00 0.00 38.37 2.85
5354 6047 0.911525 CAGGGGTCATGGTGGACTCT 60.912 60.000 0.00 0.00 38.37 3.24
5355 6048 1.201429 ACAGGGGTCATGGTGGACTC 61.201 60.000 0.00 0.00 37.56 3.36
5356 6049 0.772124 AACAGGGGTCATGGTGGACT 60.772 55.000 0.00 0.00 37.91 3.85
5357 6050 0.322546 GAACAGGGGTCATGGTGGAC 60.323 60.000 0.00 0.00 37.06 4.02
5358 6051 0.770166 TGAACAGGGGTCATGGTGGA 60.770 55.000 0.00 0.00 0.00 4.02
5359 6052 0.332632 ATGAACAGGGGTCATGGTGG 59.667 55.000 0.00 0.00 0.00 4.61
5360 6053 1.755179 GATGAACAGGGGTCATGGTG 58.245 55.000 0.77 0.00 0.00 4.17
5361 6054 0.253044 CGATGAACAGGGGTCATGGT 59.747 55.000 0.77 0.00 0.00 3.55
5362 6055 0.253044 ACGATGAACAGGGGTCATGG 59.747 55.000 0.77 3.13 0.00 3.66
5363 6056 1.372582 CACGATGAACAGGGGTCATG 58.627 55.000 0.77 0.00 0.00 3.07
5364 6057 0.253044 CCACGATGAACAGGGGTCAT 59.747 55.000 0.00 0.00 0.00 3.06
5365 6058 1.676968 CCACGATGAACAGGGGTCA 59.323 57.895 0.00 0.00 0.00 4.02
5366 6059 1.745489 GCCACGATGAACAGGGGTC 60.745 63.158 0.00 0.00 0.00 4.46
5367 6060 2.351276 GCCACGATGAACAGGGGT 59.649 61.111 0.00 0.00 0.00 4.95
5368 6061 2.438434 GGCCACGATGAACAGGGG 60.438 66.667 0.00 0.00 0.00 4.79
5369 6062 1.303236 TTGGCCACGATGAACAGGG 60.303 57.895 3.88 0.00 0.00 4.45
5370 6063 1.308069 CCTTGGCCACGATGAACAGG 61.308 60.000 11.54 6.09 0.00 4.00
5371 6064 1.308069 CCCTTGGCCACGATGAACAG 61.308 60.000 11.54 0.00 0.00 3.16
5372 6065 1.303236 CCCTTGGCCACGATGAACA 60.303 57.895 11.54 0.00 0.00 3.18
5373 6066 0.394352 ATCCCTTGGCCACGATGAAC 60.394 55.000 11.54 0.00 0.00 3.18
5374 6067 1.140852 CTATCCCTTGGCCACGATGAA 59.859 52.381 11.54 0.00 0.00 2.57
5375 6068 0.758734 CTATCCCTTGGCCACGATGA 59.241 55.000 11.54 7.33 0.00 2.92
5376 6069 0.469917 ACTATCCCTTGGCCACGATG 59.530 55.000 11.54 1.44 0.00 3.84
5377 6070 0.469917 CACTATCCCTTGGCCACGAT 59.530 55.000 11.54 12.13 0.00 3.73
5378 6071 0.907704 ACACTATCCCTTGGCCACGA 60.908 55.000 11.54 4.70 0.00 4.35
5379 6072 0.828022 TACACTATCCCTTGGCCACG 59.172 55.000 3.88 2.40 0.00 4.94
5380 6073 1.472728 CGTACACTATCCCTTGGCCAC 60.473 57.143 3.88 0.00 0.00 5.01
5381 6074 0.828022 CGTACACTATCCCTTGGCCA 59.172 55.000 0.00 0.00 0.00 5.36
5382 6075 0.532196 GCGTACACTATCCCTTGGCC 60.532 60.000 0.00 0.00 0.00 5.36
5383 6076 0.874607 CGCGTACACTATCCCTTGGC 60.875 60.000 0.00 0.00 0.00 4.52
5384 6077 0.742505 TCGCGTACACTATCCCTTGG 59.257 55.000 5.77 0.00 0.00 3.61
5385 6078 1.674441 TCTCGCGTACACTATCCCTTG 59.326 52.381 5.77 0.00 0.00 3.61
5386 6079 1.948145 CTCTCGCGTACACTATCCCTT 59.052 52.381 5.77 0.00 0.00 3.95
5387 6080 1.140452 TCTCTCGCGTACACTATCCCT 59.860 52.381 5.77 0.00 0.00 4.20
5388 6081 1.263752 GTCTCTCGCGTACACTATCCC 59.736 57.143 5.77 0.00 0.00 3.85
5389 6082 1.263752 GGTCTCTCGCGTACACTATCC 59.736 57.143 5.77 0.00 0.00 2.59
5390 6083 1.938577 TGGTCTCTCGCGTACACTATC 59.061 52.381 5.77 0.00 0.00 2.08
5391 6084 2.034104 TGGTCTCTCGCGTACACTAT 57.966 50.000 5.77 0.00 0.00 2.12
5392 6085 1.812235 TTGGTCTCTCGCGTACACTA 58.188 50.000 5.77 0.00 0.00 2.74
5393 6086 0.956633 TTTGGTCTCTCGCGTACACT 59.043 50.000 5.77 0.00 0.00 3.55
5394 6087 1.337821 CTTTGGTCTCTCGCGTACAC 58.662 55.000 5.77 0.00 0.00 2.90
5395 6088 0.242825 CCTTTGGTCTCTCGCGTACA 59.757 55.000 5.77 0.00 0.00 2.90
5396 6089 1.077089 GCCTTTGGTCTCTCGCGTAC 61.077 60.000 5.77 0.25 0.00 3.67
5397 6090 1.214589 GCCTTTGGTCTCTCGCGTA 59.785 57.895 5.77 0.00 0.00 4.42
5398 6091 2.048127 GCCTTTGGTCTCTCGCGT 60.048 61.111 5.77 0.00 0.00 6.01
5399 6092 3.181967 CGCCTTTGGTCTCTCGCG 61.182 66.667 0.00 0.00 0.00 5.87
5400 6093 2.815647 CCGCCTTTGGTCTCTCGC 60.816 66.667 0.00 0.00 0.00 5.03
5401 6094 2.815647 GCCGCCTTTGGTCTCTCG 60.816 66.667 0.00 0.00 0.00 4.04
5402 6095 1.301677 CTTGCCGCCTTTGGTCTCTC 61.302 60.000 0.00 0.00 0.00 3.20
5403 6096 1.302832 CTTGCCGCCTTTGGTCTCT 60.303 57.895 0.00 0.00 0.00 3.10
5404 6097 1.600916 ACTTGCCGCCTTTGGTCTC 60.601 57.895 0.00 0.00 0.00 3.36
5405 6098 1.898574 CACTTGCCGCCTTTGGTCT 60.899 57.895 0.00 0.00 0.00 3.85
5406 6099 2.644992 CACTTGCCGCCTTTGGTC 59.355 61.111 0.00 0.00 0.00 4.02
5407 6100 2.912025 CCACTTGCCGCCTTTGGT 60.912 61.111 0.00 0.00 0.00 3.67
5408 6101 4.362476 GCCACTTGCCGCCTTTGG 62.362 66.667 0.00 0.00 0.00 3.28
5417 6110 1.010419 CGCAATCTTTGGCCACTTGC 61.010 55.000 22.45 22.45 38.99 4.01
5418 6111 0.597568 TCGCAATCTTTGGCCACTTG 59.402 50.000 3.88 8.57 0.00 3.16
5419 6112 1.203052 CATCGCAATCTTTGGCCACTT 59.797 47.619 3.88 0.00 0.00 3.16
5420 6113 0.813184 CATCGCAATCTTTGGCCACT 59.187 50.000 3.88 0.00 0.00 4.00
5421 6114 0.179129 CCATCGCAATCTTTGGCCAC 60.179 55.000 3.88 0.00 0.00 5.01
5422 6115 0.323269 TCCATCGCAATCTTTGGCCA 60.323 50.000 0.00 0.00 0.00 5.36
5423 6116 1.035139 ATCCATCGCAATCTTTGGCC 58.965 50.000 0.00 0.00 0.00 5.36
5424 6117 1.269413 CCATCCATCGCAATCTTTGGC 60.269 52.381 0.00 0.00 0.00 4.52
5425 6118 1.269413 GCCATCCATCGCAATCTTTGG 60.269 52.381 0.00 0.00 0.00 3.28
5426 6119 1.269413 GGCCATCCATCGCAATCTTTG 60.269 52.381 0.00 0.00 0.00 2.77
5427 6120 1.035139 GGCCATCCATCGCAATCTTT 58.965 50.000 0.00 0.00 0.00 2.52
5428 6121 1.168407 CGGCCATCCATCGCAATCTT 61.168 55.000 2.24 0.00 0.00 2.40
5429 6122 1.598962 CGGCCATCCATCGCAATCT 60.599 57.895 2.24 0.00 0.00 2.40
5430 6123 1.447317 AACGGCCATCCATCGCAATC 61.447 55.000 2.24 0.00 0.00 2.67
5431 6124 1.037030 AAACGGCCATCCATCGCAAT 61.037 50.000 2.24 0.00 0.00 3.56
5432 6125 1.677300 AAACGGCCATCCATCGCAA 60.677 52.632 2.24 0.00 0.00 4.85
5433 6126 2.045438 AAACGGCCATCCATCGCA 60.045 55.556 2.24 0.00 0.00 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.