Multiple sequence alignment - TraesCS2D01G189400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G189400 chr2D 100.000 4054 0 0 1 4054 133049541 133053594 0.000000e+00 7487.0
1 TraesCS2D01G189400 chr2D 96.894 161 3 2 1 159 79513341 79513181 6.680000e-68 268.0
2 TraesCS2D01G189400 chr2D 90.000 70 7 0 3312 3381 332335129 332335198 1.550000e-14 91.6
3 TraesCS2D01G189400 chr2D 96.000 50 2 0 490 539 133050079 133050030 9.340000e-12 82.4
4 TraesCS2D01G189400 chr2A 94.085 2671 94 26 583 3218 140555751 140558392 0.000000e+00 3999.0
5 TraesCS2D01G189400 chr2A 93.235 1153 57 6 2063 3213 139923221 139922088 0.000000e+00 1677.0
6 TraesCS2D01G189400 chr2A 92.690 725 32 8 789 1506 139937335 139936625 0.000000e+00 1026.0
7 TraesCS2D01G189400 chr2A 96.190 315 12 0 1494 1808 139932104 139931790 2.160000e-142 516.0
8 TraesCS2D01G189400 chr2A 96.313 217 8 0 1804 2020 139923432 139923216 1.390000e-94 357.0
9 TraesCS2D01G189400 chr2A 93.392 227 11 4 586 809 139937571 139937346 2.340000e-87 333.0
10 TraesCS2D01G189400 chr2A 94.737 57 3 0 3260 3316 139891052 139890996 5.580000e-14 89.8
11 TraesCS2D01G189400 chr2A 90.909 66 3 2 3206 3268 139903775 139903710 7.220000e-13 86.1
12 TraesCS2D01G189400 chr2A 100.000 30 0 0 571 600 140555713 140555742 5.660000e-04 56.5
13 TraesCS2D01G189400 chr2B 94.291 2610 87 31 671 3245 188811914 188814496 0.000000e+00 3938.0
14 TraesCS2D01G189400 chr2B 79.245 106 18 4 439 542 782045417 782045314 2.020000e-08 71.3
15 TraesCS2D01G189400 chr3D 97.477 436 11 0 3619 4054 24172338 24172773 0.000000e+00 745.0
16 TraesCS2D01G189400 chr3D 93.103 58 4 0 3324 3381 24172282 24172339 7.220000e-13 86.1
17 TraesCS2D01G189400 chr3D 100.000 35 0 0 450 484 488243676 488243710 9.410000e-07 65.8
18 TraesCS2D01G189400 chr5D 94.761 439 20 3 3619 4054 488189982 488190420 0.000000e+00 680.0
19 TraesCS2D01G189400 chr5D 98.726 157 2 0 1 157 114812306 114812462 3.090000e-71 279.0
20 TraesCS2D01G189400 chr5D 89.706 68 6 1 3311 3378 488189914 488189980 7.220000e-13 86.1
21 TraesCS2D01G189400 chr6D 88.470 451 36 5 3619 4054 436726682 436727131 7.720000e-147 531.0
22 TraesCS2D01G189400 chr6D 100.000 36 0 0 448 483 108554630 108554665 2.620000e-07 67.6
23 TraesCS2D01G189400 chr6D 86.885 61 4 2 488 544 439768390 439768330 9.410000e-07 65.8
24 TraesCS2D01G189400 chr1B 86.918 451 37 9 3619 4054 432211683 432211240 1.690000e-133 486.0
25 TraesCS2D01G189400 chr1B 95.902 244 10 0 3379 3622 101552001 101552244 2.940000e-106 396.0
26 TraesCS2D01G189400 chr1B 87.879 66 7 1 3316 3381 624716497 624716561 4.350000e-10 76.8
27 TraesCS2D01G189400 chr1B 78.788 99 20 1 292 390 486776144 486776241 9.410000e-07 65.8
28 TraesCS2D01G189400 chr6A 86.067 445 44 5 3623 4054 16614603 16614164 2.850000e-126 462.0
29 TraesCS2D01G189400 chr4D 96.311 244 9 0 3379 3622 111717971 111718214 6.310000e-108 401.0
30 TraesCS2D01G189400 chr4D 95.902 244 10 0 3379 3622 32130002 32130245 2.940000e-106 396.0
31 TraesCS2D01G189400 chr4D 95.902 244 10 0 3379 3622 368597787 368598030 2.940000e-106 396.0
32 TraesCS2D01G189400 chr3B 96.311 244 9 0 3379 3622 376972683 376972926 6.310000e-108 401.0
33 TraesCS2D01G189400 chr3B 95.570 158 6 1 1 157 246442654 246442811 6.730000e-63 252.0
34 TraesCS2D01G189400 chr3B 90.141 71 7 0 3311 3381 812616705 812616775 4.310000e-15 93.5
35 TraesCS2D01G189400 chr3B 95.349 43 1 1 446 487 496693226 496693268 2.620000e-07 67.6
36 TraesCS2D01G189400 chr3B 92.500 40 2 1 443 482 664018490 664018452 5.660000e-04 56.5
37 TraesCS2D01G189400 chr1D 95.918 245 10 0 3379 3623 272614898 272615142 8.160000e-107 398.0
38 TraesCS2D01G189400 chr1D 95.000 60 3 0 488 547 326777523 326777464 1.200000e-15 95.3
39 TraesCS2D01G189400 chr1D 94.828 58 3 0 488 545 65902502 65902445 1.550000e-14 91.6
40 TraesCS2D01G189400 chr1D 98.077 52 1 0 488 539 65902449 65902500 1.550000e-14 91.6
41 TraesCS2D01G189400 chr1D 93.333 60 4 0 488 547 326777470 326777529 5.580000e-14 89.8
42 TraesCS2D01G189400 chr1D 89.394 66 6 1 3316 3381 454204666 454204730 9.340000e-12 82.4
43 TraesCS2D01G189400 chr7B 94.531 256 12 2 3368 3621 535229062 535228807 1.060000e-105 394.0
44 TraesCS2D01G189400 chr7B 93.902 164 9 1 1 163 623494228 623494391 3.130000e-61 246.0
45 TraesCS2D01G189400 chr7B 93.750 160 10 0 1 160 623280203 623280362 1.460000e-59 241.0
46 TraesCS2D01G189400 chr7B 93.293 164 10 1 1 163 623385239 623385402 1.460000e-59 241.0
47 TraesCS2D01G189400 chr6B 95.161 248 12 0 3375 3622 582048866 582049113 3.800000e-105 392.0
48 TraesCS2D01G189400 chr6B 80.208 96 9 8 450 544 183717422 183717336 3.380000e-06 63.9
49 TraesCS2D01G189400 chr5A 95.181 249 10 2 3373 3620 641054736 641054489 3.800000e-105 392.0
50 TraesCS2D01G189400 chr5A 81.915 94 7 8 453 545 609875478 609875394 2.020000e-08 71.3
51 TraesCS2D01G189400 chr5A 85.714 56 4 2 488 539 416182709 416182764 5.660000e-04 56.5
52 TraesCS2D01G189400 chrUn 96.744 215 7 0 3619 3833 44705810 44706024 3.850000e-95 359.0
53 TraesCS2D01G189400 chrUn 93.103 58 4 0 3324 3381 44705754 44705811 7.220000e-13 86.1
54 TraesCS2D01G189400 chr7D 98.089 157 3 0 1 157 110095659 110095815 1.440000e-69 274.0
55 TraesCS2D01G189400 chr7D 93.333 45 3 0 443 487 264302336 264302292 2.620000e-07 67.6
56 TraesCS2D01G189400 chr5B 95.625 160 4 1 1 157 311518154 311518313 1.870000e-63 254.0
57 TraesCS2D01G189400 chr5B 93.373 166 9 2 1 164 120933196 120933361 1.130000e-60 244.0
58 TraesCS2D01G189400 chr5B 91.176 68 6 0 3314 3381 669447668 669447735 4.310000e-15 93.5
59 TraesCS2D01G189400 chr5B 92.727 55 2 2 488 542 679146348 679146296 1.210000e-10 78.7
60 TraesCS2D01G189400 chr5B 97.297 37 1 0 488 524 457970998 457971034 3.380000e-06 63.9
61 TraesCS2D01G189400 chr4A 86.864 236 17 3 3832 4054 237100312 237100546 6.730000e-63 252.0
62 TraesCS2D01G189400 chr4A 80.734 109 19 2 3749 3856 546013715 546013822 2.600000e-12 84.2
63 TraesCS2D01G189400 chr4A 97.143 35 1 0 450 484 626283591 626283625 4.380000e-05 60.2
64 TraesCS2D01G189400 chr7A 90.000 70 7 0 3312 3381 566981630 566981699 1.550000e-14 91.6
65 TraesCS2D01G189400 chr1A 97.222 36 1 0 449 484 331313764 331313729 1.220000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G189400 chr2D 133049541 133053594 4053 False 7487.00 7487 100.0000 1 4054 1 chr2D.!!$F1 4053
1 TraesCS2D01G189400 chr2A 140555713 140558392 2679 False 2027.75 3999 97.0425 571 3218 2 chr2A.!!$F1 2647
2 TraesCS2D01G189400 chr2A 139922088 139923432 1344 True 1017.00 1677 94.7740 1804 3213 2 chr2A.!!$R4 1409
3 TraesCS2D01G189400 chr2A 139936625 139937571 946 True 679.50 1026 93.0410 586 1506 2 chr2A.!!$R5 920
4 TraesCS2D01G189400 chr2B 188811914 188814496 2582 False 3938.00 3938 94.2910 671 3245 1 chr2B.!!$F1 2574
5 TraesCS2D01G189400 chr5D 488189914 488190420 506 False 383.05 680 92.2335 3311 4054 2 chr5D.!!$F2 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 87 0.034896 AGACGGCATTGTTCTCGGTT 59.965 50.0 0.0 0.0 0.00 4.44 F
501 502 0.178973 TGTCAACTCCCTCCGTCTCA 60.179 55.0 0.0 0.0 0.00 3.27 F
545 546 0.257039 TGGGACGGAGGGACTAGTAC 59.743 60.0 0.0 0.0 41.55 2.73 F
569 570 0.451792 CGAGCTCAAGAAAAGCGCAC 60.452 55.0 15.4 0.0 44.59 5.34 F
2292 2393 0.473694 TGCAGGGAAGGACAAGGAGA 60.474 55.0 0.0 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 2082 1.455849 CTTCACCTTGGCCTCCACA 59.544 57.895 3.32 0.0 30.78 4.17 R
2223 2320 1.227999 ACGTCACCAAACATCCAGCG 61.228 55.000 0.00 0.0 0.00 5.18 R
2432 2533 1.366366 CCTGTCCGACACGTCCTTT 59.634 57.895 0.00 0.0 0.00 3.11 R
2852 2953 0.692419 CCTCTGGGCTCAGGTGGTAT 60.692 60.000 15.13 0.0 41.23 2.73 R
3290 3406 0.034670 AGAGGGCTCTTTGTGATGCC 60.035 55.000 0.00 0.0 44.22 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 7.605410 AAAAAGAGACGTGTGTTCTTTTAGA 57.395 32.000 18.81 0.00 45.43 2.10
70 71 6.585389 AAAGAGACGTGTGTTCTTTTAGAC 57.415 37.500 0.00 0.00 37.78 2.59
71 72 4.288531 AGAGACGTGTGTTCTTTTAGACG 58.711 43.478 0.00 0.00 39.19 4.18
72 73 3.378339 AGACGTGTGTTCTTTTAGACGG 58.622 45.455 0.00 0.00 37.82 4.79
73 74 1.862827 ACGTGTGTTCTTTTAGACGGC 59.137 47.619 0.00 0.00 37.82 5.68
74 75 1.862201 CGTGTGTTCTTTTAGACGGCA 59.138 47.619 0.00 0.00 30.96 5.69
75 76 2.478894 CGTGTGTTCTTTTAGACGGCAT 59.521 45.455 0.00 0.00 30.96 4.40
76 77 3.059188 CGTGTGTTCTTTTAGACGGCATT 60.059 43.478 0.00 0.00 30.96 3.56
77 78 4.219033 GTGTGTTCTTTTAGACGGCATTG 58.781 43.478 0.00 0.00 0.00 2.82
78 79 3.880490 TGTGTTCTTTTAGACGGCATTGT 59.120 39.130 0.00 0.00 0.00 2.71
79 80 4.336993 TGTGTTCTTTTAGACGGCATTGTT 59.663 37.500 0.00 0.00 0.00 2.83
80 81 4.909880 GTGTTCTTTTAGACGGCATTGTTC 59.090 41.667 0.00 0.00 0.00 3.18
81 82 4.819630 TGTTCTTTTAGACGGCATTGTTCT 59.180 37.500 0.00 0.00 0.00 3.01
82 83 5.049680 TGTTCTTTTAGACGGCATTGTTCTC 60.050 40.000 0.00 0.00 0.00 2.87
83 84 3.678072 TCTTTTAGACGGCATTGTTCTCG 59.322 43.478 0.00 0.00 0.00 4.04
84 85 2.004583 TTAGACGGCATTGTTCTCGG 57.995 50.000 0.00 0.00 0.00 4.63
85 86 0.892755 TAGACGGCATTGTTCTCGGT 59.107 50.000 0.00 0.00 0.00 4.69
86 87 0.034896 AGACGGCATTGTTCTCGGTT 59.965 50.000 0.00 0.00 0.00 4.44
87 88 1.274167 AGACGGCATTGTTCTCGGTTA 59.726 47.619 0.00 0.00 0.00 2.85
88 89 2.093658 AGACGGCATTGTTCTCGGTTAT 60.094 45.455 0.00 0.00 0.00 1.89
89 90 2.676342 GACGGCATTGTTCTCGGTTATT 59.324 45.455 0.00 0.00 0.00 1.40
90 91 3.078837 ACGGCATTGTTCTCGGTTATTT 58.921 40.909 0.00 0.00 0.00 1.40
91 92 3.504520 ACGGCATTGTTCTCGGTTATTTT 59.495 39.130 0.00 0.00 0.00 1.82
92 93 4.696402 ACGGCATTGTTCTCGGTTATTTTA 59.304 37.500 0.00 0.00 0.00 1.52
93 94 5.163794 ACGGCATTGTTCTCGGTTATTTTAG 60.164 40.000 0.00 0.00 0.00 1.85
94 95 5.034797 GGCATTGTTCTCGGTTATTTTAGC 58.965 41.667 0.00 0.00 0.00 3.09
95 96 5.163652 GGCATTGTTCTCGGTTATTTTAGCT 60.164 40.000 0.00 0.00 0.00 3.32
96 97 6.322491 GCATTGTTCTCGGTTATTTTAGCTT 58.678 36.000 0.00 0.00 0.00 3.74
97 98 6.806739 GCATTGTTCTCGGTTATTTTAGCTTT 59.193 34.615 0.00 0.00 0.00 3.51
98 99 7.966204 GCATTGTTCTCGGTTATTTTAGCTTTA 59.034 33.333 0.00 0.00 0.00 1.85
101 102 8.780846 TGTTCTCGGTTATTTTAGCTTTATGA 57.219 30.769 0.00 0.00 0.00 2.15
102 103 9.221933 TGTTCTCGGTTATTTTAGCTTTATGAA 57.778 29.630 0.00 0.00 0.00 2.57
106 107 8.850454 TCGGTTATTTTAGCTTTATGAATTGC 57.150 30.769 0.00 0.00 0.00 3.56
107 108 8.462811 TCGGTTATTTTAGCTTTATGAATTGCA 58.537 29.630 0.00 0.00 0.00 4.08
108 109 9.248291 CGGTTATTTTAGCTTTATGAATTGCAT 57.752 29.630 0.00 0.00 41.08 3.96
156 157 3.953201 GCACGGGCGTTATACTAGT 57.047 52.632 0.00 0.00 0.00 2.57
157 158 1.763634 GCACGGGCGTTATACTAGTC 58.236 55.000 0.00 0.00 0.00 2.59
158 159 1.066002 GCACGGGCGTTATACTAGTCA 59.934 52.381 0.00 0.00 0.00 3.41
159 160 2.480073 GCACGGGCGTTATACTAGTCAA 60.480 50.000 0.00 0.00 0.00 3.18
160 161 3.369385 CACGGGCGTTATACTAGTCAAG 58.631 50.000 0.00 0.00 0.00 3.02
161 162 3.019564 ACGGGCGTTATACTAGTCAAGT 58.980 45.455 0.00 0.00 42.62 3.16
162 163 4.035558 CACGGGCGTTATACTAGTCAAGTA 59.964 45.833 0.00 0.00 44.76 2.24
163 164 4.274459 ACGGGCGTTATACTAGTCAAGTAG 59.726 45.833 0.00 0.00 43.90 2.57
164 165 4.274459 CGGGCGTTATACTAGTCAAGTAGT 59.726 45.833 0.00 3.20 43.90 2.73
165 166 5.466728 CGGGCGTTATACTAGTCAAGTAGTA 59.533 44.000 0.00 7.09 43.90 1.82
166 167 6.564873 CGGGCGTTATACTAGTCAAGTAGTAC 60.565 46.154 0.00 0.00 43.90 2.73
167 168 6.484977 GGGCGTTATACTAGTCAAGTAGTACT 59.515 42.308 0.00 0.00 43.90 2.73
168 169 7.657761 GGGCGTTATACTAGTCAAGTAGTACTA 59.342 40.741 2.50 0.00 43.90 1.82
169 170 9.213799 GGCGTTATACTAGTCAAGTAGTACTAT 57.786 37.037 5.75 0.00 43.90 2.12
197 198 9.817809 TGTGTAGATTTGGTATTAGAGATTCAC 57.182 33.333 0.00 0.00 0.00 3.18
207 208 9.987272 TGGTATTAGAGATTCACTATGTGATTG 57.013 33.333 1.05 0.00 42.40 2.67
212 213 9.770097 TTAGAGATTCACTATGTGATTGATTCC 57.230 33.333 1.05 0.00 42.40 3.01
213 214 8.032045 AGAGATTCACTATGTGATTGATTCCT 57.968 34.615 1.05 0.00 42.40 3.36
214 215 8.492782 AGAGATTCACTATGTGATTGATTCCTT 58.507 33.333 1.05 0.00 42.40 3.36
215 216 8.674263 AGATTCACTATGTGATTGATTCCTTC 57.326 34.615 1.05 0.00 42.40 3.46
216 217 7.718753 AGATTCACTATGTGATTGATTCCTTCC 59.281 37.037 1.05 0.00 42.40 3.46
217 218 5.684704 TCACTATGTGATTGATTCCTTCCC 58.315 41.667 0.00 0.00 37.67 3.97
218 219 5.191522 TCACTATGTGATTGATTCCTTCCCA 59.808 40.000 0.00 0.00 37.67 4.37
219 220 6.066690 CACTATGTGATTGATTCCTTCCCAT 58.933 40.000 0.00 0.00 35.23 4.00
220 221 7.072328 TCACTATGTGATTGATTCCTTCCCATA 59.928 37.037 0.00 0.00 37.67 2.74
221 222 7.720957 CACTATGTGATTGATTCCTTCCCATAA 59.279 37.037 0.00 0.00 35.23 1.90
222 223 8.281531 ACTATGTGATTGATTCCTTCCCATAAA 58.718 33.333 0.00 0.00 0.00 1.40
223 224 9.305555 CTATGTGATTGATTCCTTCCCATAAAT 57.694 33.333 0.00 0.00 0.00 1.40
225 226 8.463930 TGTGATTGATTCCTTCCCATAAATAC 57.536 34.615 0.00 0.00 0.00 1.89
226 227 8.058235 TGTGATTGATTCCTTCCCATAAATACA 58.942 33.333 0.00 0.00 0.00 2.29
227 228 9.082313 GTGATTGATTCCTTCCCATAAATACAT 57.918 33.333 0.00 0.00 0.00 2.29
228 229 9.659135 TGATTGATTCCTTCCCATAAATACATT 57.341 29.630 0.00 0.00 0.00 2.71
255 256 9.717942 ACTAAATATACTGAAGATTGATCTGCC 57.282 33.333 0.00 0.00 37.19 4.85
256 257 9.941325 CTAAATATACTGAAGATTGATCTGCCT 57.059 33.333 0.00 0.00 37.19 4.75
257 258 8.618702 AAATATACTGAAGATTGATCTGCCTG 57.381 34.615 0.00 0.00 37.19 4.85
258 259 5.883685 ATACTGAAGATTGATCTGCCTGA 57.116 39.130 0.00 0.00 37.19 3.86
259 260 4.774660 ACTGAAGATTGATCTGCCTGAT 57.225 40.909 0.00 0.00 37.19 2.90
260 261 5.113446 ACTGAAGATTGATCTGCCTGATT 57.887 39.130 0.00 0.00 37.19 2.57
261 262 5.507637 ACTGAAGATTGATCTGCCTGATTT 58.492 37.500 0.00 0.00 37.19 2.17
262 263 5.950549 ACTGAAGATTGATCTGCCTGATTTT 59.049 36.000 0.00 0.00 37.19 1.82
263 264 7.114754 ACTGAAGATTGATCTGCCTGATTTTA 58.885 34.615 0.00 0.00 37.19 1.52
264 265 7.778853 ACTGAAGATTGATCTGCCTGATTTTAT 59.221 33.333 0.00 0.00 37.19 1.40
265 266 7.937649 TGAAGATTGATCTGCCTGATTTTATG 58.062 34.615 0.00 0.00 37.19 1.90
266 267 7.558807 TGAAGATTGATCTGCCTGATTTTATGT 59.441 33.333 0.00 0.00 37.19 2.29
267 268 8.985315 AAGATTGATCTGCCTGATTTTATGTA 57.015 30.769 0.00 0.00 37.19 2.29
268 269 8.618702 AGATTGATCTGCCTGATTTTATGTAG 57.381 34.615 0.00 0.00 35.42 2.74
269 270 8.435187 AGATTGATCTGCCTGATTTTATGTAGA 58.565 33.333 0.00 0.00 35.42 2.59
270 271 9.228949 GATTGATCTGCCTGATTTTATGTAGAT 57.771 33.333 0.00 0.00 35.14 1.98
271 272 8.985315 TTGATCTGCCTGATTTTATGTAGATT 57.015 30.769 0.00 0.00 35.14 2.40
272 273 8.985315 TGATCTGCCTGATTTTATGTAGATTT 57.015 30.769 0.00 0.00 35.14 2.17
273 274 8.843262 TGATCTGCCTGATTTTATGTAGATTTG 58.157 33.333 0.00 0.00 35.14 2.32
274 275 7.572523 TCTGCCTGATTTTATGTAGATTTGG 57.427 36.000 0.00 0.00 0.00 3.28
275 276 6.039717 TCTGCCTGATTTTATGTAGATTTGGC 59.960 38.462 0.00 0.00 36.38 4.52
276 277 5.655974 TGCCTGATTTTATGTAGATTTGGCA 59.344 36.000 0.00 0.00 42.38 4.92
277 278 6.183360 TGCCTGATTTTATGTAGATTTGGCAG 60.183 38.462 0.00 0.00 40.20 4.85
278 279 6.039717 GCCTGATTTTATGTAGATTTGGCAGA 59.960 38.462 0.00 0.00 35.94 4.26
279 280 7.255730 GCCTGATTTTATGTAGATTTGGCAGAT 60.256 37.037 0.00 0.00 35.94 2.90
280 281 9.288576 CCTGATTTTATGTAGATTTGGCAGATA 57.711 33.333 0.00 0.00 0.00 1.98
288 289 7.994425 TGTAGATTTGGCAGATAAAAACTGA 57.006 32.000 0.00 0.00 37.54 3.41
289 290 8.402798 TGTAGATTTGGCAGATAAAAACTGAA 57.597 30.769 0.00 0.00 37.54 3.02
290 291 9.023962 TGTAGATTTGGCAGATAAAAACTGAAT 57.976 29.630 0.00 0.00 37.54 2.57
291 292 9.860898 GTAGATTTGGCAGATAAAAACTGAATT 57.139 29.630 0.00 0.00 37.54 2.17
307 308 7.573968 AACTGAATTAAATAGATCTGTGGGC 57.426 36.000 5.18 0.00 0.00 5.36
308 309 6.904626 ACTGAATTAAATAGATCTGTGGGCT 58.095 36.000 5.18 0.00 0.00 5.19
309 310 8.034313 ACTGAATTAAATAGATCTGTGGGCTA 57.966 34.615 5.18 0.00 0.00 3.93
310 311 8.494433 ACTGAATTAAATAGATCTGTGGGCTAA 58.506 33.333 5.18 0.00 0.00 3.09
311 312 9.342308 CTGAATTAAATAGATCTGTGGGCTAAA 57.658 33.333 5.18 0.00 0.00 1.85
312 313 9.693739 TGAATTAAATAGATCTGTGGGCTAAAA 57.306 29.630 5.18 0.00 0.00 1.52
315 316 6.775594 AAATAGATCTGTGGGCTAAAAACC 57.224 37.500 5.18 0.00 0.00 3.27
316 317 3.806949 AGATCTGTGGGCTAAAAACCA 57.193 42.857 0.00 0.00 0.00 3.67
317 318 3.690460 AGATCTGTGGGCTAAAAACCAG 58.310 45.455 0.00 0.00 37.45 4.00
318 319 3.074538 AGATCTGTGGGCTAAAAACCAGT 59.925 43.478 0.00 0.00 37.45 4.00
319 320 3.306472 TCTGTGGGCTAAAAACCAGTT 57.694 42.857 0.00 0.00 37.45 3.16
320 321 3.637769 TCTGTGGGCTAAAAACCAGTTT 58.362 40.909 0.00 0.00 37.45 2.66
321 322 4.794334 TCTGTGGGCTAAAAACCAGTTTA 58.206 39.130 0.00 0.00 37.45 2.01
322 323 5.202004 TCTGTGGGCTAAAAACCAGTTTAA 58.798 37.500 0.00 0.00 37.45 1.52
323 324 5.300792 TCTGTGGGCTAAAAACCAGTTTAAG 59.699 40.000 0.00 0.00 37.45 1.85
324 325 4.957327 TGTGGGCTAAAAACCAGTTTAAGT 59.043 37.500 0.00 0.00 37.45 2.24
325 326 6.127793 TGTGGGCTAAAAACCAGTTTAAGTA 58.872 36.000 0.00 0.00 37.45 2.24
326 327 6.606395 TGTGGGCTAAAAACCAGTTTAAGTAA 59.394 34.615 0.00 0.00 37.45 2.24
327 328 7.123847 TGTGGGCTAAAAACCAGTTTAAGTAAA 59.876 33.333 0.00 0.00 37.45 2.01
328 329 8.145767 GTGGGCTAAAAACCAGTTTAAGTAAAT 58.854 33.333 0.00 0.00 37.45 1.40
329 330 8.706521 TGGGCTAAAAACCAGTTTAAGTAAATT 58.293 29.630 0.00 0.00 31.92 1.82
330 331 8.984764 GGGCTAAAAACCAGTTTAAGTAAATTG 58.015 33.333 0.00 0.61 34.07 2.32
331 332 9.752961 GGCTAAAAACCAGTTTAAGTAAATTGA 57.247 29.630 7.63 0.00 35.65 2.57
367 368 9.757227 AAAAATTGATGAGAACGGTTTTATTGA 57.243 25.926 0.00 0.00 0.00 2.57
368 369 9.757227 AAAATTGATGAGAACGGTTTTATTGAA 57.243 25.926 0.00 0.00 0.00 2.69
369 370 8.970691 AATTGATGAGAACGGTTTTATTGAAG 57.029 30.769 0.00 0.00 0.00 3.02
370 371 7.504924 TTGATGAGAACGGTTTTATTGAAGT 57.495 32.000 0.00 0.00 0.00 3.01
371 372 6.898041 TGATGAGAACGGTTTTATTGAAGTG 58.102 36.000 0.00 0.00 0.00 3.16
372 373 5.682943 TGAGAACGGTTTTATTGAAGTGG 57.317 39.130 0.00 0.00 0.00 4.00
373 374 5.369833 TGAGAACGGTTTTATTGAAGTGGA 58.630 37.500 0.00 0.00 0.00 4.02
374 375 5.468746 TGAGAACGGTTTTATTGAAGTGGAG 59.531 40.000 0.00 0.00 0.00 3.86
375 376 4.760204 AGAACGGTTTTATTGAAGTGGAGG 59.240 41.667 0.00 0.00 0.00 4.30
376 377 2.817844 ACGGTTTTATTGAAGTGGAGGC 59.182 45.455 0.00 0.00 0.00 4.70
377 378 2.159572 CGGTTTTATTGAAGTGGAGGCG 60.160 50.000 0.00 0.00 0.00 5.52
378 379 3.078837 GGTTTTATTGAAGTGGAGGCGA 58.921 45.455 0.00 0.00 0.00 5.54
379 380 3.694566 GGTTTTATTGAAGTGGAGGCGAT 59.305 43.478 0.00 0.00 0.00 4.58
380 381 4.201920 GGTTTTATTGAAGTGGAGGCGATC 60.202 45.833 0.00 0.00 0.00 3.69
381 382 4.487714 TTTATTGAAGTGGAGGCGATCT 57.512 40.909 0.00 0.00 0.00 2.75
382 383 4.487714 TTATTGAAGTGGAGGCGATCTT 57.512 40.909 0.00 0.00 0.00 2.40
383 384 5.607939 TTATTGAAGTGGAGGCGATCTTA 57.392 39.130 0.00 0.00 0.00 2.10
384 385 2.961526 TGAAGTGGAGGCGATCTTAC 57.038 50.000 0.00 0.00 0.00 2.34
385 386 1.480954 TGAAGTGGAGGCGATCTTACC 59.519 52.381 0.00 0.00 0.00 2.85
386 387 1.480954 GAAGTGGAGGCGATCTTACCA 59.519 52.381 0.00 0.00 0.00 3.25
387 388 1.568504 AGTGGAGGCGATCTTACCAA 58.431 50.000 0.00 0.00 32.32 3.67
388 389 1.207329 AGTGGAGGCGATCTTACCAAC 59.793 52.381 0.00 0.00 32.32 3.77
389 390 1.207329 GTGGAGGCGATCTTACCAACT 59.793 52.381 0.00 0.00 32.32 3.16
390 391 1.906574 TGGAGGCGATCTTACCAACTT 59.093 47.619 0.00 0.00 0.00 2.66
391 392 2.093658 TGGAGGCGATCTTACCAACTTC 60.094 50.000 0.00 0.00 0.00 3.01
392 393 2.168728 GGAGGCGATCTTACCAACTTCT 59.831 50.000 0.00 0.00 0.00 2.85
393 394 3.369576 GGAGGCGATCTTACCAACTTCTT 60.370 47.826 0.00 0.00 0.00 2.52
394 395 4.254492 GAGGCGATCTTACCAACTTCTTT 58.746 43.478 0.00 0.00 0.00 2.52
395 396 4.652822 AGGCGATCTTACCAACTTCTTTT 58.347 39.130 0.00 0.00 0.00 2.27
396 397 5.070685 AGGCGATCTTACCAACTTCTTTTT 58.929 37.500 0.00 0.00 0.00 1.94
418 419 7.914427 TTTTAGAGTAGAGATTATCAGGGCA 57.086 36.000 0.00 0.00 0.00 5.36
419 420 6.902771 TTAGAGTAGAGATTATCAGGGCAC 57.097 41.667 0.00 0.00 0.00 5.01
420 421 4.809193 AGAGTAGAGATTATCAGGGCACA 58.191 43.478 0.00 0.00 0.00 4.57
421 422 5.401750 AGAGTAGAGATTATCAGGGCACAT 58.598 41.667 0.00 0.00 0.00 3.21
422 423 5.843421 AGAGTAGAGATTATCAGGGCACATT 59.157 40.000 0.00 0.00 0.00 2.71
423 424 5.862845 AGTAGAGATTATCAGGGCACATTG 58.137 41.667 0.00 0.00 0.00 2.82
424 425 4.785346 AGAGATTATCAGGGCACATTGT 57.215 40.909 0.00 0.00 0.00 2.71
425 426 5.894298 AGAGATTATCAGGGCACATTGTA 57.106 39.130 0.00 0.00 0.00 2.41
426 427 5.615289 AGAGATTATCAGGGCACATTGTAC 58.385 41.667 0.00 0.00 0.00 2.90
427 428 5.130975 AGAGATTATCAGGGCACATTGTACA 59.869 40.000 0.00 0.00 0.00 2.90
428 429 5.754782 AGATTATCAGGGCACATTGTACAA 58.245 37.500 11.41 11.41 0.00 2.41
429 430 5.824624 AGATTATCAGGGCACATTGTACAAG 59.175 40.000 14.65 8.70 0.00 3.16
430 431 1.533625 TCAGGGCACATTGTACAAGC 58.466 50.000 14.65 11.68 0.00 4.01
431 432 1.202867 TCAGGGCACATTGTACAAGCA 60.203 47.619 14.65 0.00 0.00 3.91
432 433 1.612950 CAGGGCACATTGTACAAGCAA 59.387 47.619 14.65 0.00 0.00 3.91
433 434 2.231964 CAGGGCACATTGTACAAGCAAT 59.768 45.455 14.65 2.13 39.42 3.56
434 435 2.493278 AGGGCACATTGTACAAGCAATC 59.507 45.455 14.65 6.08 37.00 2.67
435 436 2.230992 GGGCACATTGTACAAGCAATCA 59.769 45.455 14.65 0.00 37.00 2.57
436 437 3.504863 GGCACATTGTACAAGCAATCAG 58.495 45.455 14.65 1.23 37.00 2.90
437 438 2.919229 GCACATTGTACAAGCAATCAGC 59.081 45.455 14.65 7.21 46.19 4.26
453 454 7.357951 GCAATCAGCCTCAAATATAGTACTC 57.642 40.000 0.00 0.00 37.23 2.59
454 455 6.370166 GCAATCAGCCTCAAATATAGTACTCC 59.630 42.308 0.00 0.00 37.23 3.85
455 456 6.613153 ATCAGCCTCAAATATAGTACTCCC 57.387 41.667 0.00 0.00 0.00 4.30
456 457 5.716979 TCAGCCTCAAATATAGTACTCCCT 58.283 41.667 0.00 0.00 0.00 4.20
457 458 5.775701 TCAGCCTCAAATATAGTACTCCCTC 59.224 44.000 0.00 0.00 0.00 4.30
458 459 5.777732 CAGCCTCAAATATAGTACTCCCTCT 59.222 44.000 0.00 0.00 0.00 3.69
459 460 5.777732 AGCCTCAAATATAGTACTCCCTCTG 59.222 44.000 0.00 0.00 0.00 3.35
460 461 5.540719 GCCTCAAATATAGTACTCCCTCTGT 59.459 44.000 0.00 0.00 0.00 3.41
461 462 6.294843 GCCTCAAATATAGTACTCCCTCTGTC 60.295 46.154 0.00 0.00 0.00 3.51
462 463 7.007723 CCTCAAATATAGTACTCCCTCTGTCT 58.992 42.308 0.00 0.00 0.00 3.41
463 464 7.175990 CCTCAAATATAGTACTCCCTCTGTCTC 59.824 44.444 0.00 0.00 0.00 3.36
464 465 7.583625 TCAAATATAGTACTCCCTCTGTCTCA 58.416 38.462 0.00 0.00 0.00 3.27
465 466 8.228206 TCAAATATAGTACTCCCTCTGTCTCAT 58.772 37.037 0.00 0.00 0.00 2.90
466 467 9.521841 CAAATATAGTACTCCCTCTGTCTCATA 57.478 37.037 0.00 0.00 0.00 2.15
477 478 9.197694 CTCCCTCTGTCTCATAATATAAAAACG 57.802 37.037 0.00 0.00 0.00 3.60
478 479 8.701895 TCCCTCTGTCTCATAATATAAAAACGT 58.298 33.333 0.00 0.00 0.00 3.99
479 480 9.326413 CCCTCTGTCTCATAATATAAAAACGTT 57.674 33.333 0.00 0.00 0.00 3.99
492 493 8.806177 ATATAAAAACGTTTTTGTCAACTCCC 57.194 30.769 36.92 0.00 40.33 4.30
493 494 4.794278 AAAACGTTTTTGTCAACTCCCT 57.206 36.364 20.26 0.00 0.00 4.20
494 495 4.365899 AAACGTTTTTGTCAACTCCCTC 57.634 40.909 7.96 0.00 0.00 4.30
495 496 2.294979 ACGTTTTTGTCAACTCCCTCC 58.705 47.619 0.00 0.00 0.00 4.30
496 497 1.263217 CGTTTTTGTCAACTCCCTCCG 59.737 52.381 0.00 0.00 0.00 4.63
497 498 2.294979 GTTTTTGTCAACTCCCTCCGT 58.705 47.619 0.00 0.00 0.00 4.69
498 499 2.249844 TTTTGTCAACTCCCTCCGTC 57.750 50.000 0.00 0.00 0.00 4.79
499 500 1.420430 TTTGTCAACTCCCTCCGTCT 58.580 50.000 0.00 0.00 0.00 4.18
500 501 0.966920 TTGTCAACTCCCTCCGTCTC 59.033 55.000 0.00 0.00 0.00 3.36
501 502 0.178973 TGTCAACTCCCTCCGTCTCA 60.179 55.000 0.00 0.00 0.00 3.27
502 503 1.187087 GTCAACTCCCTCCGTCTCAT 58.813 55.000 0.00 0.00 0.00 2.90
503 504 2.291346 TGTCAACTCCCTCCGTCTCATA 60.291 50.000 0.00 0.00 0.00 2.15
504 505 2.758979 GTCAACTCCCTCCGTCTCATAA 59.241 50.000 0.00 0.00 0.00 1.90
505 506 3.385111 GTCAACTCCCTCCGTCTCATAAT 59.615 47.826 0.00 0.00 0.00 1.28
506 507 4.583489 GTCAACTCCCTCCGTCTCATAATA 59.417 45.833 0.00 0.00 0.00 0.98
507 508 5.244178 GTCAACTCCCTCCGTCTCATAATAT 59.756 44.000 0.00 0.00 0.00 1.28
508 509 6.433404 GTCAACTCCCTCCGTCTCATAATATA 59.567 42.308 0.00 0.00 0.00 0.86
509 510 7.008332 TCAACTCCCTCCGTCTCATAATATAA 58.992 38.462 0.00 0.00 0.00 0.98
510 511 7.176865 TCAACTCCCTCCGTCTCATAATATAAG 59.823 40.741 0.00 0.00 0.00 1.73
511 512 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
512 513 6.887545 ACTCCCTCCGTCTCATAATATAAGAG 59.112 42.308 0.00 0.00 0.00 2.85
513 514 5.652891 TCCCTCCGTCTCATAATATAAGAGC 59.347 44.000 0.00 0.00 0.00 4.09
514 515 5.449314 CCCTCCGTCTCATAATATAAGAGCG 60.449 48.000 0.00 0.00 0.00 5.03
515 516 4.982999 TCCGTCTCATAATATAAGAGCGC 58.017 43.478 0.00 0.00 32.01 5.92
516 517 4.700692 TCCGTCTCATAATATAAGAGCGCT 59.299 41.667 11.27 11.27 32.01 5.92
517 518 5.031578 CCGTCTCATAATATAAGAGCGCTC 58.968 45.833 30.01 30.01 32.01 5.03
518 519 5.163703 CCGTCTCATAATATAAGAGCGCTCT 60.164 44.000 33.83 33.83 42.75 4.09
531 532 5.331876 AGAGCGCTCTTATATTATGGGAC 57.668 43.478 33.83 3.60 36.31 4.46
532 533 4.106197 GAGCGCTCTTATATTATGGGACG 58.894 47.826 29.88 0.00 0.00 4.79
533 534 3.119101 AGCGCTCTTATATTATGGGACGG 60.119 47.826 2.64 0.00 0.00 4.79
534 535 3.119245 GCGCTCTTATATTATGGGACGGA 60.119 47.826 0.00 0.00 0.00 4.69
535 536 4.673441 CGCTCTTATATTATGGGACGGAG 58.327 47.826 0.00 0.00 0.00 4.63
536 537 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
537 538 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
538 539 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
539 540 5.021458 TCTTATATTATGGGACGGAGGGAC 58.979 45.833 0.00 0.00 0.00 4.46
541 542 4.687262 ATATTATGGGACGGAGGGACTA 57.313 45.455 0.00 0.00 41.55 2.59
542 543 2.376695 TTATGGGACGGAGGGACTAG 57.623 55.000 0.00 0.00 41.55 2.57
543 544 1.229131 TATGGGACGGAGGGACTAGT 58.771 55.000 0.00 0.00 41.55 2.57
544 545 1.229131 ATGGGACGGAGGGACTAGTA 58.771 55.000 0.00 0.00 41.55 1.82
545 546 0.257039 TGGGACGGAGGGACTAGTAC 59.743 60.000 0.00 0.00 41.55 2.73
546 547 0.550432 GGGACGGAGGGACTAGTACT 59.450 60.000 4.77 0.00 41.55 2.73
547 548 1.771255 GGGACGGAGGGACTAGTACTA 59.229 57.143 4.77 1.89 41.55 1.82
548 549 2.224499 GGGACGGAGGGACTAGTACTAG 60.224 59.091 25.30 25.30 41.55 2.57
549 550 2.224499 GGACGGAGGGACTAGTACTAGG 60.224 59.091 29.05 14.58 41.55 3.02
550 551 1.142667 ACGGAGGGACTAGTACTAGGC 59.857 57.143 29.05 27.33 41.55 3.93
551 552 1.877258 CGGAGGGACTAGTACTAGGCG 60.877 61.905 29.05 12.90 42.13 5.52
552 553 1.419387 GGAGGGACTAGTACTAGGCGA 59.581 57.143 29.05 0.00 42.13 5.54
553 554 2.550639 GGAGGGACTAGTACTAGGCGAG 60.551 59.091 29.05 10.99 42.13 5.03
554 555 1.202794 AGGGACTAGTACTAGGCGAGC 60.203 57.143 29.05 16.25 42.13 5.03
555 556 1.202794 GGGACTAGTACTAGGCGAGCT 60.203 57.143 29.05 10.92 42.13 4.09
556 557 2.145536 GGACTAGTACTAGGCGAGCTC 58.854 57.143 29.05 17.75 42.13 4.09
557 558 2.485124 GGACTAGTACTAGGCGAGCTCA 60.485 54.545 29.05 0.00 42.13 4.26
558 559 3.204526 GACTAGTACTAGGCGAGCTCAA 58.795 50.000 29.05 0.00 37.49 3.02
559 560 3.207778 ACTAGTACTAGGCGAGCTCAAG 58.792 50.000 29.05 7.61 37.49 3.02
560 561 2.421751 AGTACTAGGCGAGCTCAAGA 57.578 50.000 15.40 0.00 0.00 3.02
561 562 2.724454 AGTACTAGGCGAGCTCAAGAA 58.276 47.619 15.40 0.00 0.00 2.52
562 563 3.090037 AGTACTAGGCGAGCTCAAGAAA 58.910 45.455 15.40 0.00 0.00 2.52
563 564 3.510360 AGTACTAGGCGAGCTCAAGAAAA 59.490 43.478 15.40 0.00 0.00 2.29
564 565 2.966050 ACTAGGCGAGCTCAAGAAAAG 58.034 47.619 15.40 5.47 0.00 2.27
565 566 1.663135 CTAGGCGAGCTCAAGAAAAGC 59.337 52.381 15.40 6.75 40.14 3.51
566 567 1.133458 GGCGAGCTCAAGAAAAGCG 59.867 57.895 15.40 0.00 44.59 4.68
567 568 1.510833 GCGAGCTCAAGAAAAGCGC 60.511 57.895 15.40 0.00 44.59 5.92
568 569 1.862123 CGAGCTCAAGAAAAGCGCA 59.138 52.632 15.40 0.00 44.59 6.09
569 570 0.451792 CGAGCTCAAGAAAAGCGCAC 60.452 55.000 15.40 0.00 44.59 5.34
608 635 4.227300 ACCCTGTAAATCATTGGTCAGCTA 59.773 41.667 0.00 0.00 0.00 3.32
647 675 5.264395 ACTACTCTTATGCAAAGGCCAATT 58.736 37.500 5.01 0.00 40.13 2.32
649 677 5.077134 ACTCTTATGCAAAGGCCAATTTC 57.923 39.130 5.01 0.00 40.13 2.17
654 682 1.347378 TGCAAAGGCCAATTTCTTCCC 59.653 47.619 5.01 0.00 40.13 3.97
655 683 1.625315 GCAAAGGCCAATTTCTTCCCT 59.375 47.619 5.01 0.00 0.00 4.20
656 684 2.831526 GCAAAGGCCAATTTCTTCCCTA 59.168 45.455 5.01 0.00 0.00 3.53
815 876 3.187637 ACACACACACACACACTAACAAC 59.812 43.478 0.00 0.00 0.00 3.32
833 894 2.279851 CCGTCCTGTTCGTGTGCA 60.280 61.111 0.00 0.00 0.00 4.57
852 913 4.209288 GTGCAACGTAGTGCTTATCCATAG 59.791 45.833 13.05 0.00 45.00 2.23
910 972 1.446966 GGCTGACTTCACTCCGAGC 60.447 63.158 0.00 0.00 0.00 5.03
1051 1133 0.953003 CCTCCTCGTCTTATCCGGTC 59.047 60.000 0.00 0.00 0.00 4.79
1246 1329 5.777850 AACTTAATTAGCCCAACGTGTTT 57.222 34.783 0.00 0.00 0.00 2.83
1302 1388 6.821665 GCACACACCTTTAATCCTACTGATTA 59.178 38.462 0.00 0.00 41.96 1.75
1305 1391 8.548877 ACACACCTTTAATCCTACTGATTATGT 58.451 33.333 0.00 0.00 43.66 2.29
1473 1560 5.160699 CATGCATCCACATGTTGTAGTAC 57.839 43.478 0.00 0.00 42.05 2.73
1474 1561 4.551702 TGCATCCACATGTTGTAGTACT 57.448 40.909 0.00 0.00 31.86 2.73
1475 1562 5.669164 TGCATCCACATGTTGTAGTACTA 57.331 39.130 0.00 0.00 31.86 1.82
1700 1794 1.663135 GAGCTCAACATCTTCTTCCGC 59.337 52.381 9.40 0.00 0.00 5.54
1751 1848 3.021695 CCACATCTCTGATGCAACCATT 58.978 45.455 7.39 0.00 0.00 3.16
1752 1849 4.201657 CCACATCTCTGATGCAACCATTA 58.798 43.478 7.39 0.00 0.00 1.90
1756 1853 6.916387 CACATCTCTGATGCAACCATTAATTC 59.084 38.462 7.39 0.00 0.00 2.17
1759 1856 7.034685 TCTCTGATGCAACCATTAATTCATG 57.965 36.000 0.00 0.00 0.00 3.07
1801 1898 2.285977 TCACATCTGATCTGCATGCAC 58.714 47.619 18.46 8.19 0.00 4.57
1964 2061 2.680352 GAGTCGTGGGAGCTGGGA 60.680 66.667 0.00 0.00 0.00 4.37
2201 2298 2.683933 AACCTCGGCTCCGGTGAT 60.684 61.111 7.92 0.00 40.25 3.06
2292 2393 0.473694 TGCAGGGAAGGACAAGGAGA 60.474 55.000 0.00 0.00 0.00 3.71
2699 2800 2.838360 TGCTCCAAGAAGCAGCCA 59.162 55.556 0.00 0.00 47.00 4.75
2867 2968 0.253160 AGGAATACCACCTGAGCCCA 60.253 55.000 0.00 0.00 38.94 5.36
3082 3195 4.330620 GCGACGAGGTTCCATTTGTATTTA 59.669 41.667 0.00 0.00 0.00 1.40
3084 3197 6.457799 GCGACGAGGTTCCATTTGTATTTATT 60.458 38.462 0.00 0.00 0.00 1.40
3087 3200 9.931210 GACGAGGTTCCATTTGTATTTATTAAG 57.069 33.333 0.00 0.00 0.00 1.85
3121 3236 2.202703 TTAGGACGCGCGTGACATGA 62.203 55.000 42.90 18.77 0.00 3.07
3132 3247 2.930887 GCGTGACATGAAGAAGGCACTA 60.931 50.000 0.00 0.00 38.49 2.74
3133 3248 2.926200 CGTGACATGAAGAAGGCACTAG 59.074 50.000 0.00 0.00 38.49 2.57
3134 3249 2.675348 GTGACATGAAGAAGGCACTAGC 59.325 50.000 0.00 0.00 38.49 3.42
3188 3303 1.847328 TCTGAGCTGTCCACCGATAA 58.153 50.000 0.00 0.00 0.00 1.75
3192 3307 1.751924 GAGCTGTCCACCGATAACTCT 59.248 52.381 0.00 0.00 0.00 3.24
3245 3361 4.122776 CGTGAGCAAGAATTAGCAGGTAT 58.877 43.478 0.00 0.00 0.00 2.73
3246 3362 4.210120 CGTGAGCAAGAATTAGCAGGTATC 59.790 45.833 0.00 0.00 0.00 2.24
3247 3363 5.118990 GTGAGCAAGAATTAGCAGGTATCA 58.881 41.667 0.00 0.00 0.00 2.15
3248 3364 5.586243 GTGAGCAAGAATTAGCAGGTATCAA 59.414 40.000 0.00 0.00 0.00 2.57
3249 3365 5.819379 TGAGCAAGAATTAGCAGGTATCAAG 59.181 40.000 0.00 0.00 0.00 3.02
3250 3366 5.994250 AGCAAGAATTAGCAGGTATCAAGA 58.006 37.500 0.00 0.00 0.00 3.02
3251 3367 6.418101 AGCAAGAATTAGCAGGTATCAAGAA 58.582 36.000 0.00 0.00 0.00 2.52
3252 3368 6.541641 AGCAAGAATTAGCAGGTATCAAGAAG 59.458 38.462 0.00 0.00 0.00 2.85
3253 3369 6.540189 GCAAGAATTAGCAGGTATCAAGAAGA 59.460 38.462 0.00 0.00 0.00 2.87
3254 3370 7.254727 GCAAGAATTAGCAGGTATCAAGAAGAG 60.255 40.741 0.00 0.00 0.00 2.85
3255 3371 7.430760 AGAATTAGCAGGTATCAAGAAGAGT 57.569 36.000 0.00 0.00 0.00 3.24
3256 3372 7.856415 AGAATTAGCAGGTATCAAGAAGAGTT 58.144 34.615 0.00 0.00 0.00 3.01
3257 3373 8.982723 AGAATTAGCAGGTATCAAGAAGAGTTA 58.017 33.333 0.00 0.00 0.00 2.24
3258 3374 9.601217 GAATTAGCAGGTATCAAGAAGAGTTAA 57.399 33.333 0.00 0.00 0.00 2.01
3259 3375 8.950208 ATTAGCAGGTATCAAGAAGAGTTAAC 57.050 34.615 0.00 0.00 0.00 2.01
3260 3376 6.360370 AGCAGGTATCAAGAAGAGTTAACA 57.640 37.500 8.61 0.00 0.00 2.41
3261 3377 6.951971 AGCAGGTATCAAGAAGAGTTAACAT 58.048 36.000 8.61 0.00 0.00 2.71
3262 3378 7.398024 AGCAGGTATCAAGAAGAGTTAACATT 58.602 34.615 8.61 1.93 0.00 2.71
3263 3379 8.540388 AGCAGGTATCAAGAAGAGTTAACATTA 58.460 33.333 8.61 0.00 0.00 1.90
3264 3380 9.331282 GCAGGTATCAAGAAGAGTTAACATTAT 57.669 33.333 8.61 0.00 0.00 1.28
3286 3402 8.691661 TTATTAAGTCAGATAATTTGGAGGCC 57.308 34.615 0.00 0.00 0.00 5.19
3287 3403 4.591321 AAGTCAGATAATTTGGAGGCCA 57.409 40.909 5.01 0.00 0.00 5.36
3288 3404 4.803329 AGTCAGATAATTTGGAGGCCAT 57.197 40.909 5.01 0.00 31.53 4.40
3289 3405 5.134725 AGTCAGATAATTTGGAGGCCATT 57.865 39.130 5.01 0.00 31.53 3.16
3290 3406 4.891756 AGTCAGATAATTTGGAGGCCATTG 59.108 41.667 5.01 0.00 31.53 2.82
3291 3407 4.038402 GTCAGATAATTTGGAGGCCATTGG 59.962 45.833 5.01 0.00 31.53 3.16
3304 3420 2.288961 CCATTGGCATCACAAAGAGC 57.711 50.000 0.00 0.00 33.48 4.09
3306 3422 1.134907 CATTGGCATCACAAAGAGCCC 60.135 52.381 0.00 0.00 46.45 5.19
3307 3423 0.112995 TTGGCATCACAAAGAGCCCT 59.887 50.000 0.00 0.00 46.45 5.19
3308 3424 0.322816 TGGCATCACAAAGAGCCCTC 60.323 55.000 0.00 0.00 46.45 4.30
3309 3425 0.034670 GGCATCACAAAGAGCCCTCT 60.035 55.000 0.00 0.00 41.25 3.69
3310 3426 1.377536 GCATCACAAAGAGCCCTCTC 58.622 55.000 0.00 0.00 39.39 3.20
3311 3427 1.339438 GCATCACAAAGAGCCCTCTCA 60.339 52.381 0.00 0.00 41.81 3.27
3312 3428 2.354259 CATCACAAAGAGCCCTCTCAC 58.646 52.381 0.00 0.00 41.81 3.51
3313 3429 1.722034 TCACAAAGAGCCCTCTCACT 58.278 50.000 0.00 0.00 41.81 3.41
3314 3430 2.889512 TCACAAAGAGCCCTCTCACTA 58.110 47.619 0.00 0.00 41.81 2.74
3315 3431 3.239449 TCACAAAGAGCCCTCTCACTAA 58.761 45.455 0.00 0.00 41.81 2.24
3316 3432 3.259374 TCACAAAGAGCCCTCTCACTAAG 59.741 47.826 0.00 0.00 41.81 2.18
3317 3433 2.569404 ACAAAGAGCCCTCTCACTAAGG 59.431 50.000 0.00 0.00 41.81 2.69
3318 3434 1.199615 AAGAGCCCTCTCACTAAGGC 58.800 55.000 0.00 0.00 46.13 4.35
3393 3509 7.817910 TTTAAAATACTACTCCCTCCTTCCA 57.182 36.000 0.00 0.00 0.00 3.53
3394 3510 8.401955 TTTAAAATACTACTCCCTCCTTCCAT 57.598 34.615 0.00 0.00 0.00 3.41
3395 3511 6.502074 AAAATACTACTCCCTCCTTCCATC 57.498 41.667 0.00 0.00 0.00 3.51
3396 3512 5.426325 AATACTACTCCCTCCTTCCATCT 57.574 43.478 0.00 0.00 0.00 2.90
3397 3513 6.547396 AATACTACTCCCTCCTTCCATCTA 57.453 41.667 0.00 0.00 0.00 1.98
3398 3514 6.744802 ATACTACTCCCTCCTTCCATCTAT 57.255 41.667 0.00 0.00 0.00 1.98
3399 3515 7.848821 ATACTACTCCCTCCTTCCATCTATA 57.151 40.000 0.00 0.00 0.00 1.31
3400 3516 6.744802 ACTACTCCCTCCTTCCATCTATAT 57.255 41.667 0.00 0.00 0.00 0.86
3401 3517 7.848821 ACTACTCCCTCCTTCCATCTATATA 57.151 40.000 0.00 0.00 0.00 0.86
3402 3518 7.878495 ACTACTCCCTCCTTCCATCTATATAG 58.122 42.308 3.10 3.10 0.00 1.31
3403 3519 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
3404 3520 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
3405 3521 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
3406 3522 4.327332 CCCTCCTTCCATCTATATAGGGCT 60.327 50.000 9.89 0.00 36.30 5.19
3407 3523 5.284582 CCTCCTTCCATCTATATAGGGCTT 58.715 45.833 9.89 0.00 0.00 4.35
3408 3524 6.444704 CCTCCTTCCATCTATATAGGGCTTA 58.555 44.000 9.89 0.00 0.00 3.09
3409 3525 6.903534 CCTCCTTCCATCTATATAGGGCTTAA 59.096 42.308 9.89 0.00 0.00 1.85
3410 3526 7.570607 CCTCCTTCCATCTATATAGGGCTTAAT 59.429 40.741 9.89 0.00 0.00 1.40
3411 3527 8.324191 TCCTTCCATCTATATAGGGCTTAATG 57.676 38.462 9.89 5.15 0.00 1.90
3412 3528 6.995091 CCTTCCATCTATATAGGGCTTAATGC 59.005 42.308 9.89 0.00 41.94 3.56
3413 3529 6.161855 TCCATCTATATAGGGCTTAATGCG 57.838 41.667 9.89 1.15 44.05 4.73
3414 3530 5.661312 TCCATCTATATAGGGCTTAATGCGT 59.339 40.000 9.89 0.00 44.05 5.24
3415 3531 6.156256 TCCATCTATATAGGGCTTAATGCGTT 59.844 38.462 9.89 0.00 44.05 4.84
3416 3532 6.823689 CCATCTATATAGGGCTTAATGCGTTT 59.176 38.462 9.89 0.00 44.05 3.60
3417 3533 7.336931 CCATCTATATAGGGCTTAATGCGTTTT 59.663 37.037 9.89 0.00 44.05 2.43
3418 3534 8.730680 CATCTATATAGGGCTTAATGCGTTTTT 58.269 33.333 9.89 0.00 44.05 1.94
3419 3535 8.319143 TCTATATAGGGCTTAATGCGTTTTTC 57.681 34.615 9.89 0.00 44.05 2.29
3420 3536 2.629639 AGGGCTTAATGCGTTTTTCG 57.370 45.000 0.00 0.00 44.05 3.46
3421 3537 2.156098 AGGGCTTAATGCGTTTTTCGA 58.844 42.857 0.00 0.00 44.05 3.71
3422 3538 2.161609 AGGGCTTAATGCGTTTTTCGAG 59.838 45.455 0.00 0.00 44.05 4.04
3423 3539 2.515912 GGCTTAATGCGTTTTTCGAGG 58.484 47.619 0.00 0.00 44.05 4.63
3424 3540 1.911464 GCTTAATGCGTTTTTCGAGGC 59.089 47.619 0.00 0.00 42.86 4.70
3425 3541 2.414161 GCTTAATGCGTTTTTCGAGGCT 60.414 45.455 0.00 0.00 42.86 4.58
3426 3542 3.181514 GCTTAATGCGTTTTTCGAGGCTA 60.182 43.478 0.00 0.00 42.86 3.93
3427 3543 4.670735 GCTTAATGCGTTTTTCGAGGCTAA 60.671 41.667 0.00 0.00 42.86 3.09
3428 3544 2.894307 ATGCGTTTTTCGAGGCTAAC 57.106 45.000 0.00 0.00 42.86 2.34
3429 3545 1.873698 TGCGTTTTTCGAGGCTAACT 58.126 45.000 0.00 0.00 42.86 2.24
3430 3546 2.215196 TGCGTTTTTCGAGGCTAACTT 58.785 42.857 0.00 0.00 42.86 2.66
3431 3547 2.614983 TGCGTTTTTCGAGGCTAACTTT 59.385 40.909 0.00 0.00 42.86 2.66
3432 3548 2.971261 GCGTTTTTCGAGGCTAACTTTG 59.029 45.455 0.00 0.00 42.86 2.77
3433 3549 3.303526 GCGTTTTTCGAGGCTAACTTTGA 60.304 43.478 0.00 0.00 42.86 2.69
3434 3550 4.612939 GCGTTTTTCGAGGCTAACTTTGAT 60.613 41.667 0.00 0.00 42.86 2.57
3435 3551 5.080068 CGTTTTTCGAGGCTAACTTTGATC 58.920 41.667 0.00 0.00 42.86 2.92
3436 3552 5.333798 CGTTTTTCGAGGCTAACTTTGATCA 60.334 40.000 0.00 0.00 42.86 2.92
3437 3553 6.435428 GTTTTTCGAGGCTAACTTTGATCAA 58.565 36.000 3.38 3.38 0.00 2.57
3438 3554 6.627395 TTTTCGAGGCTAACTTTGATCAAA 57.373 33.333 19.45 19.45 0.00 2.69
3439 3555 6.817765 TTTCGAGGCTAACTTTGATCAAAT 57.182 33.333 20.76 10.14 0.00 2.32
3440 3556 7.915293 TTTCGAGGCTAACTTTGATCAAATA 57.085 32.000 20.76 10.73 0.00 1.40
3441 3557 8.506168 TTTCGAGGCTAACTTTGATCAAATAT 57.494 30.769 20.76 14.55 0.00 1.28
3442 3558 8.506168 TTCGAGGCTAACTTTGATCAAATATT 57.494 30.769 20.76 18.70 0.00 1.28
3443 3559 9.607988 TTCGAGGCTAACTTTGATCAAATATTA 57.392 29.630 20.76 18.80 0.00 0.98
3444 3560 9.607988 TCGAGGCTAACTTTGATCAAATATTAA 57.392 29.630 20.76 5.27 0.00 1.40
3448 3564 9.801873 GGCTAACTTTGATCAAATATTAAAGCA 57.198 29.630 20.76 3.68 32.97 3.91
3479 3595 5.956068 TGATATGCAACTTACACAAAGCA 57.044 34.783 0.00 0.00 38.93 3.91
3480 3596 5.698832 TGATATGCAACTTACACAAAGCAC 58.301 37.500 0.00 0.00 38.93 4.40
3481 3597 5.240403 TGATATGCAACTTACACAAAGCACA 59.760 36.000 0.00 0.00 38.93 4.57
3482 3598 3.143807 TGCAACTTACACAAAGCACAC 57.856 42.857 0.00 0.00 38.93 3.82
3483 3599 2.159310 TGCAACTTACACAAAGCACACC 60.159 45.455 0.00 0.00 38.93 4.16
3484 3600 2.715268 CAACTTACACAAAGCACACCG 58.285 47.619 0.00 0.00 38.93 4.94
3485 3601 2.032680 ACTTACACAAAGCACACCGT 57.967 45.000 0.00 0.00 38.93 4.83
3486 3602 2.361789 ACTTACACAAAGCACACCGTT 58.638 42.857 0.00 0.00 38.93 4.44
3487 3603 3.533547 ACTTACACAAAGCACACCGTTA 58.466 40.909 0.00 0.00 38.93 3.18
3488 3604 3.940221 ACTTACACAAAGCACACCGTTAA 59.060 39.130 0.00 0.00 38.93 2.01
3489 3605 4.395542 ACTTACACAAAGCACACCGTTAAA 59.604 37.500 0.00 0.00 38.93 1.52
3490 3606 5.066764 ACTTACACAAAGCACACCGTTAAAT 59.933 36.000 0.00 0.00 38.93 1.40
3491 3607 4.379339 ACACAAAGCACACCGTTAAATT 57.621 36.364 0.00 0.00 0.00 1.82
3492 3608 4.356289 ACACAAAGCACACCGTTAAATTC 58.644 39.130 0.00 0.00 0.00 2.17
3493 3609 3.420576 CACAAAGCACACCGTTAAATTCG 59.579 43.478 0.00 0.00 0.00 3.34
3494 3610 3.065648 ACAAAGCACACCGTTAAATTCGT 59.934 39.130 0.00 0.00 0.00 3.85
3495 3611 2.961522 AGCACACCGTTAAATTCGTG 57.038 45.000 0.00 0.00 0.00 4.35
3496 3612 2.215196 AGCACACCGTTAAATTCGTGT 58.785 42.857 0.00 0.00 0.00 4.49
3497 3613 2.032377 AGCACACCGTTAAATTCGTGTG 60.032 45.455 13.39 13.39 40.02 3.82
3498 3614 2.286536 GCACACCGTTAAATTCGTGTGT 60.287 45.455 17.54 12.66 40.37 3.72
3499 3615 3.284914 CACACCGTTAAATTCGTGTGTG 58.715 45.455 17.05 17.05 44.50 3.82
3500 3616 3.196463 ACACCGTTAAATTCGTGTGTGA 58.804 40.909 9.71 0.00 39.31 3.58
3501 3617 3.622163 ACACCGTTAAATTCGTGTGTGAA 59.378 39.130 9.71 0.00 39.31 3.18
3502 3618 4.094590 ACACCGTTAAATTCGTGTGTGAAA 59.905 37.500 9.71 0.00 39.31 2.69
3503 3619 4.668837 CACCGTTAAATTCGTGTGTGAAAG 59.331 41.667 0.00 0.00 0.00 2.62
3504 3620 4.215965 CCGTTAAATTCGTGTGTGAAAGG 58.784 43.478 0.00 0.00 0.00 3.11
3505 3621 4.024725 CCGTTAAATTCGTGTGTGAAAGGA 60.025 41.667 0.00 0.00 0.00 3.36
3506 3622 5.137403 CGTTAAATTCGTGTGTGAAAGGAG 58.863 41.667 0.00 0.00 0.00 3.69
3507 3623 3.626028 AAATTCGTGTGTGAAAGGAGC 57.374 42.857 0.00 0.00 0.00 4.70
3508 3624 2.550830 ATTCGTGTGTGAAAGGAGCT 57.449 45.000 0.00 0.00 0.00 4.09
3509 3625 2.325583 TTCGTGTGTGAAAGGAGCTT 57.674 45.000 0.00 0.00 0.00 3.74
3510 3626 2.325583 TCGTGTGTGAAAGGAGCTTT 57.674 45.000 0.00 0.00 36.29 3.51
3511 3627 2.210116 TCGTGTGTGAAAGGAGCTTTC 58.790 47.619 0.00 0.00 46.88 2.62
3558 3674 8.962884 TGCATGTCATGTACTATTAATCTTGT 57.037 30.769 14.26 0.00 0.00 3.16
3559 3675 9.045223 TGCATGTCATGTACTATTAATCTTGTC 57.955 33.333 14.26 0.00 0.00 3.18
3560 3676 9.045223 GCATGTCATGTACTATTAATCTTGTCA 57.955 33.333 14.26 0.00 0.00 3.58
3573 3689 5.551760 AATCTTGTCAATAGTCAAAGGCG 57.448 39.130 0.00 0.00 0.00 5.52
3574 3690 3.334691 TCTTGTCAATAGTCAAAGGCGG 58.665 45.455 0.00 0.00 0.00 6.13
3575 3691 2.851263 TGTCAATAGTCAAAGGCGGT 57.149 45.000 0.00 0.00 0.00 5.68
3576 3692 2.695359 TGTCAATAGTCAAAGGCGGTC 58.305 47.619 0.00 0.00 0.00 4.79
3577 3693 2.301870 TGTCAATAGTCAAAGGCGGTCT 59.698 45.455 0.00 0.00 0.00 3.85
3578 3694 3.244422 TGTCAATAGTCAAAGGCGGTCTT 60.244 43.478 0.00 0.00 37.28 3.01
3579 3695 4.020928 TGTCAATAGTCAAAGGCGGTCTTA 60.021 41.667 0.00 0.00 34.78 2.10
3580 3696 4.933400 GTCAATAGTCAAAGGCGGTCTTAA 59.067 41.667 0.00 0.00 34.78 1.85
3581 3697 5.410439 GTCAATAGTCAAAGGCGGTCTTAAA 59.590 40.000 0.00 0.00 34.78 1.52
3582 3698 5.998981 TCAATAGTCAAAGGCGGTCTTAAAA 59.001 36.000 0.00 0.00 34.78 1.52
3583 3699 6.487331 TCAATAGTCAAAGGCGGTCTTAAAAA 59.513 34.615 0.00 0.00 34.78 1.94
3607 3723 8.650143 AAACACATTAGGCCCTATATAAATGG 57.350 34.615 0.00 1.05 0.00 3.16
3608 3724 7.582909 ACACATTAGGCCCTATATAAATGGA 57.417 36.000 0.00 0.00 0.00 3.41
3609 3725 7.995663 ACACATTAGGCCCTATATAAATGGAA 58.004 34.615 0.00 0.00 0.00 3.53
3610 3726 8.109634 ACACATTAGGCCCTATATAAATGGAAG 58.890 37.037 0.00 1.42 0.00 3.46
3611 3727 7.557719 CACATTAGGCCCTATATAAATGGAAGG 59.442 40.741 0.00 0.00 0.00 3.46
3612 3728 7.464265 ACATTAGGCCCTATATAAATGGAAGGA 59.536 37.037 0.00 0.00 0.00 3.36
3613 3729 7.510675 TTAGGCCCTATATAAATGGAAGGAG 57.489 40.000 0.00 0.00 0.00 3.69
3614 3730 4.790790 AGGCCCTATATAAATGGAAGGAGG 59.209 45.833 0.00 0.00 0.00 4.30
3615 3731 4.079730 GGCCCTATATAAATGGAAGGAGGG 60.080 50.000 0.00 0.00 44.52 4.30
3616 3732 4.788617 GCCCTATATAAATGGAAGGAGGGA 59.211 45.833 7.83 0.00 44.48 4.20
3617 3733 5.104318 GCCCTATATAAATGGAAGGAGGGAG 60.104 48.000 7.83 0.00 44.48 4.30
3618 3734 6.032693 CCCTATATAAATGGAAGGAGGGAGT 58.967 44.000 0.00 0.00 44.48 3.85
3619 3735 7.196901 CCCTATATAAATGGAAGGAGGGAGTA 58.803 42.308 0.00 0.00 44.48 2.59
3620 3736 7.851968 CCCTATATAAATGGAAGGAGGGAGTAT 59.148 40.741 0.00 0.00 44.48 2.12
3621 3737 8.709308 CCTATATAAATGGAAGGAGGGAGTATG 58.291 40.741 0.00 0.00 0.00 2.39
3622 3738 5.850046 ATAAATGGAAGGAGGGAGTATGG 57.150 43.478 0.00 0.00 0.00 2.74
3623 3739 2.897823 ATGGAAGGAGGGAGTATGGT 57.102 50.000 0.00 0.00 0.00 3.55
3624 3740 2.661176 TGGAAGGAGGGAGTATGGTT 57.339 50.000 0.00 0.00 0.00 3.67
3625 3741 2.929301 TGGAAGGAGGGAGTATGGTTT 58.071 47.619 0.00 0.00 0.00 3.27
3649 3765 9.616156 TTTTAATTACTGTGAGGTGTTTGACTA 57.384 29.630 0.00 0.00 0.00 2.59
3665 3781 3.815809 TGACTACCCAGAAAAACTGTGG 58.184 45.455 0.00 0.00 44.40 4.17
3696 3812 2.946785 ACGGTATTCCCAAAACCACAA 58.053 42.857 0.00 0.00 32.55 3.33
3707 3823 6.991938 TCCCAAAACCACAATATTTTCTCTG 58.008 36.000 0.00 0.00 0.00 3.35
3709 3825 6.868339 CCCAAAACCACAATATTTTCTCTGTC 59.132 38.462 0.00 0.00 0.00 3.51
3764 3882 0.794605 GAGCATGCGAAAGAAACGGC 60.795 55.000 13.01 0.00 0.00 5.68
3792 3910 2.011122 TCTTCTTCCTCGGTCCAAGT 57.989 50.000 0.00 0.00 0.00 3.16
3800 3919 0.961358 CTCGGTCCAAGTCGTCTCCT 60.961 60.000 0.00 0.00 0.00 3.69
3867 3986 5.993748 ACCAAGAGACAACAAAGGAAAAA 57.006 34.783 0.00 0.00 0.00 1.94
3934 4053 1.289109 CGCCCGTGTTCACCTACAAG 61.289 60.000 0.00 0.00 0.00 3.16
3962 4081 2.998316 AGAAGCTAGCACAAGGGATC 57.002 50.000 18.83 2.02 0.00 3.36
4041 4160 4.317671 ACCTACGTGATATGTACCTTGC 57.682 45.455 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 7.461918 GTCTAAAAGAACACACGTCTCTTTTT 58.538 34.615 20.43 11.01 43.48 1.94
46 47 6.237755 CGTCTAAAAGAACACACGTCTCTTTT 60.238 38.462 19.69 19.69 46.16 2.27
47 48 5.231568 CGTCTAAAAGAACACACGTCTCTTT 59.768 40.000 5.91 5.91 40.31 2.52
48 49 4.738740 CGTCTAAAAGAACACACGTCTCTT 59.261 41.667 0.00 0.00 0.00 2.85
49 50 4.288531 CGTCTAAAAGAACACACGTCTCT 58.711 43.478 0.00 0.00 0.00 3.10
50 51 3.424529 CCGTCTAAAAGAACACACGTCTC 59.575 47.826 0.00 0.00 0.00 3.36
51 52 3.378339 CCGTCTAAAAGAACACACGTCT 58.622 45.455 0.00 0.00 0.00 4.18
52 53 2.097056 GCCGTCTAAAAGAACACACGTC 60.097 50.000 0.00 0.00 0.00 4.34
53 54 1.862827 GCCGTCTAAAAGAACACACGT 59.137 47.619 0.00 0.00 0.00 4.49
54 55 1.862201 TGCCGTCTAAAAGAACACACG 59.138 47.619 0.00 0.00 0.00 4.49
55 56 4.219033 CAATGCCGTCTAAAAGAACACAC 58.781 43.478 0.00 0.00 0.00 3.82
56 57 3.880490 ACAATGCCGTCTAAAAGAACACA 59.120 39.130 0.00 0.00 0.00 3.72
57 58 4.483476 ACAATGCCGTCTAAAAGAACAC 57.517 40.909 0.00 0.00 0.00 3.32
58 59 4.819630 AGAACAATGCCGTCTAAAAGAACA 59.180 37.500 0.00 0.00 0.00 3.18
59 60 5.358298 AGAACAATGCCGTCTAAAAGAAC 57.642 39.130 0.00 0.00 0.00 3.01
60 61 4.151689 CGAGAACAATGCCGTCTAAAAGAA 59.848 41.667 0.00 0.00 0.00 2.52
61 62 3.678072 CGAGAACAATGCCGTCTAAAAGA 59.322 43.478 0.00 0.00 0.00 2.52
62 63 3.181520 CCGAGAACAATGCCGTCTAAAAG 60.182 47.826 0.00 0.00 0.00 2.27
63 64 2.739913 CCGAGAACAATGCCGTCTAAAA 59.260 45.455 0.00 0.00 0.00 1.52
64 65 2.289195 ACCGAGAACAATGCCGTCTAAA 60.289 45.455 0.00 0.00 0.00 1.85
65 66 1.274167 ACCGAGAACAATGCCGTCTAA 59.726 47.619 0.00 0.00 0.00 2.10
66 67 0.892755 ACCGAGAACAATGCCGTCTA 59.107 50.000 0.00 0.00 0.00 2.59
67 68 0.034896 AACCGAGAACAATGCCGTCT 59.965 50.000 0.00 0.00 0.00 4.18
68 69 1.717194 TAACCGAGAACAATGCCGTC 58.283 50.000 0.00 0.00 0.00 4.79
69 70 2.396590 ATAACCGAGAACAATGCCGT 57.603 45.000 0.00 0.00 0.00 5.68
70 71 3.757745 AAATAACCGAGAACAATGCCG 57.242 42.857 0.00 0.00 0.00 5.69
71 72 5.034797 GCTAAAATAACCGAGAACAATGCC 58.965 41.667 0.00 0.00 0.00 4.40
72 73 5.880341 AGCTAAAATAACCGAGAACAATGC 58.120 37.500 0.00 0.00 0.00 3.56
75 76 9.221933 TCATAAAGCTAAAATAACCGAGAACAA 57.778 29.630 0.00 0.00 0.00 2.83
76 77 8.780846 TCATAAAGCTAAAATAACCGAGAACA 57.219 30.769 0.00 0.00 0.00 3.18
80 81 8.958043 GCAATTCATAAAGCTAAAATAACCGAG 58.042 33.333 0.00 0.00 0.00 4.63
81 82 8.462811 TGCAATTCATAAAGCTAAAATAACCGA 58.537 29.630 0.00 0.00 0.00 4.69
82 83 8.627487 TGCAATTCATAAAGCTAAAATAACCG 57.373 30.769 0.00 0.00 0.00 4.44
138 139 1.066002 TGACTAGTATAACGCCCGTGC 59.934 52.381 0.00 0.00 0.00 5.34
139 140 3.181493 ACTTGACTAGTATAACGCCCGTG 60.181 47.826 0.00 0.00 34.56 4.94
140 141 3.019564 ACTTGACTAGTATAACGCCCGT 58.980 45.455 0.00 0.00 34.56 5.28
141 142 3.705043 ACTTGACTAGTATAACGCCCG 57.295 47.619 0.00 0.00 34.56 6.13
142 143 5.764487 ACTACTTGACTAGTATAACGCCC 57.236 43.478 0.00 0.00 38.63 6.13
143 144 7.489574 AGTACTACTTGACTAGTATAACGCC 57.510 40.000 0.00 0.00 38.63 5.68
171 172 9.817809 GTGAATCTCTAATACCAAATCTACACA 57.182 33.333 0.00 0.00 0.00 3.72
181 182 9.987272 CAATCACATAGTGAATCTCTAATACCA 57.013 33.333 3.74 0.00 45.96 3.25
186 187 9.770097 GGAATCAATCACATAGTGAATCTCTAA 57.230 33.333 3.74 0.00 45.96 2.10
187 188 9.152327 AGGAATCAATCACATAGTGAATCTCTA 57.848 33.333 3.74 0.00 45.96 2.43
188 189 8.032045 AGGAATCAATCACATAGTGAATCTCT 57.968 34.615 3.74 0.00 45.96 3.10
189 190 8.674263 AAGGAATCAATCACATAGTGAATCTC 57.326 34.615 3.74 0.00 45.96 2.75
190 191 7.718753 GGAAGGAATCAATCACATAGTGAATCT 59.281 37.037 3.74 0.00 45.96 2.40
191 192 7.040823 GGGAAGGAATCAATCACATAGTGAATC 60.041 40.741 3.74 0.00 45.96 2.52
192 193 6.774656 GGGAAGGAATCAATCACATAGTGAAT 59.225 38.462 3.74 0.00 45.96 2.57
193 194 6.122277 GGGAAGGAATCAATCACATAGTGAA 58.878 40.000 3.74 0.00 45.96 3.18
194 195 5.191522 TGGGAAGGAATCAATCACATAGTGA 59.808 40.000 1.95 1.95 46.90 3.41
195 196 5.439721 TGGGAAGGAATCAATCACATAGTG 58.560 41.667 0.00 0.00 34.45 2.74
196 197 5.715439 TGGGAAGGAATCAATCACATAGT 57.285 39.130 0.00 0.00 0.00 2.12
197 198 8.696043 TTTATGGGAAGGAATCAATCACATAG 57.304 34.615 8.69 0.00 39.77 2.23
199 200 9.082313 GTATTTATGGGAAGGAATCAATCACAT 57.918 33.333 7.30 7.30 40.22 3.21
200 201 8.058235 TGTATTTATGGGAAGGAATCAATCACA 58.942 33.333 0.00 0.00 0.00 3.58
201 202 8.463930 TGTATTTATGGGAAGGAATCAATCAC 57.536 34.615 0.00 0.00 0.00 3.06
202 203 9.659135 AATGTATTTATGGGAAGGAATCAATCA 57.341 29.630 0.00 0.00 0.00 2.57
229 230 9.717942 GGCAGATCAATCTTCAGTATATTTAGT 57.282 33.333 0.00 0.00 34.22 2.24
230 231 9.941325 AGGCAGATCAATCTTCAGTATATTTAG 57.059 33.333 0.00 0.00 34.22 1.85
231 232 9.716531 CAGGCAGATCAATCTTCAGTATATTTA 57.283 33.333 0.00 0.00 34.22 1.40
232 233 8.435187 TCAGGCAGATCAATCTTCAGTATATTT 58.565 33.333 0.00 0.00 34.22 1.40
233 234 7.971201 TCAGGCAGATCAATCTTCAGTATATT 58.029 34.615 0.00 0.00 34.22 1.28
234 235 7.550597 TCAGGCAGATCAATCTTCAGTATAT 57.449 36.000 0.00 0.00 34.22 0.86
235 236 6.983906 TCAGGCAGATCAATCTTCAGTATA 57.016 37.500 0.00 0.00 34.22 1.47
236 237 5.883685 TCAGGCAGATCAATCTTCAGTAT 57.116 39.130 0.00 0.00 34.22 2.12
237 238 5.883685 ATCAGGCAGATCAATCTTCAGTA 57.116 39.130 0.00 0.00 34.22 2.74
238 239 4.774660 ATCAGGCAGATCAATCTTCAGT 57.225 40.909 0.00 0.00 34.22 3.41
239 240 6.452494 AAAATCAGGCAGATCAATCTTCAG 57.548 37.500 0.00 0.00 35.39 3.02
240 241 7.558807 ACATAAAATCAGGCAGATCAATCTTCA 59.441 33.333 0.00 0.00 35.39 3.02
241 242 7.938715 ACATAAAATCAGGCAGATCAATCTTC 58.061 34.615 0.00 0.00 35.39 2.87
242 243 7.893124 ACATAAAATCAGGCAGATCAATCTT 57.107 32.000 0.00 0.00 35.39 2.40
243 244 8.435187 TCTACATAAAATCAGGCAGATCAATCT 58.565 33.333 0.00 0.00 35.39 2.40
244 245 8.613060 TCTACATAAAATCAGGCAGATCAATC 57.387 34.615 0.00 0.00 35.39 2.67
245 246 9.584008 AATCTACATAAAATCAGGCAGATCAAT 57.416 29.630 0.00 0.00 35.39 2.57
246 247 8.985315 AATCTACATAAAATCAGGCAGATCAA 57.015 30.769 0.00 0.00 35.39 2.57
247 248 8.843262 CAAATCTACATAAAATCAGGCAGATCA 58.157 33.333 0.00 0.00 35.39 2.92
248 249 8.295288 CCAAATCTACATAAAATCAGGCAGATC 58.705 37.037 0.00 0.00 35.39 2.75
249 250 7.255730 GCCAAATCTACATAAAATCAGGCAGAT 60.256 37.037 0.00 0.00 39.09 2.90
250 251 6.039717 GCCAAATCTACATAAAATCAGGCAGA 59.960 38.462 0.00 0.00 37.23 4.26
251 252 6.183360 TGCCAAATCTACATAAAATCAGGCAG 60.183 38.462 0.00 0.00 41.79 4.85
252 253 5.655974 TGCCAAATCTACATAAAATCAGGCA 59.344 36.000 0.00 0.00 44.13 4.75
253 254 6.039717 TCTGCCAAATCTACATAAAATCAGGC 59.960 38.462 0.00 0.00 37.75 4.85
254 255 7.572523 TCTGCCAAATCTACATAAAATCAGG 57.427 36.000 0.00 0.00 0.00 3.86
262 263 9.679661 TCAGTTTTTATCTGCCAAATCTACATA 57.320 29.630 0.00 0.00 33.48 2.29
263 264 8.579850 TCAGTTTTTATCTGCCAAATCTACAT 57.420 30.769 0.00 0.00 33.48 2.29
264 265 7.994425 TCAGTTTTTATCTGCCAAATCTACA 57.006 32.000 0.00 0.00 33.48 2.74
265 266 9.860898 AATTCAGTTTTTATCTGCCAAATCTAC 57.139 29.630 0.00 0.00 33.48 2.59
281 282 8.470002 GCCCACAGATCTATTTAATTCAGTTTT 58.530 33.333 0.00 0.00 0.00 2.43
282 283 7.836183 AGCCCACAGATCTATTTAATTCAGTTT 59.164 33.333 0.00 0.00 0.00 2.66
283 284 7.349598 AGCCCACAGATCTATTTAATTCAGTT 58.650 34.615 0.00 0.00 0.00 3.16
284 285 6.904626 AGCCCACAGATCTATTTAATTCAGT 58.095 36.000 0.00 0.00 0.00 3.41
285 286 8.908786 TTAGCCCACAGATCTATTTAATTCAG 57.091 34.615 0.00 0.00 0.00 3.02
286 287 9.693739 TTTTAGCCCACAGATCTATTTAATTCA 57.306 29.630 0.00 0.00 0.00 2.57
289 290 8.914011 GGTTTTTAGCCCACAGATCTATTTAAT 58.086 33.333 0.00 0.00 0.00 1.40
290 291 7.891183 TGGTTTTTAGCCCACAGATCTATTTAA 59.109 33.333 0.00 0.00 0.00 1.52
291 292 7.406916 TGGTTTTTAGCCCACAGATCTATTTA 58.593 34.615 0.00 0.00 0.00 1.40
292 293 6.252995 TGGTTTTTAGCCCACAGATCTATTT 58.747 36.000 0.00 0.00 0.00 1.40
293 294 5.826643 TGGTTTTTAGCCCACAGATCTATT 58.173 37.500 0.00 0.00 0.00 1.73
294 295 5.044846 ACTGGTTTTTAGCCCACAGATCTAT 60.045 40.000 0.00 0.00 0.00 1.98
295 296 4.288626 ACTGGTTTTTAGCCCACAGATCTA 59.711 41.667 0.00 0.00 0.00 1.98
296 297 3.074538 ACTGGTTTTTAGCCCACAGATCT 59.925 43.478 0.00 0.00 0.00 2.75
297 298 3.421844 ACTGGTTTTTAGCCCACAGATC 58.578 45.455 0.00 0.00 0.00 2.75
298 299 3.525800 ACTGGTTTTTAGCCCACAGAT 57.474 42.857 0.00 0.00 0.00 2.90
299 300 3.306472 AACTGGTTTTTAGCCCACAGA 57.694 42.857 0.00 0.00 0.00 3.41
300 301 5.068591 ACTTAAACTGGTTTTTAGCCCACAG 59.931 40.000 4.01 0.00 34.23 3.66
301 302 4.957327 ACTTAAACTGGTTTTTAGCCCACA 59.043 37.500 4.01 0.00 34.23 4.17
302 303 5.524971 ACTTAAACTGGTTTTTAGCCCAC 57.475 39.130 4.01 0.00 34.23 4.61
303 304 7.657023 TTTACTTAAACTGGTTTTTAGCCCA 57.343 32.000 4.01 0.00 34.23 5.36
304 305 8.984764 CAATTTACTTAAACTGGTTTTTAGCCC 58.015 33.333 4.01 0.00 34.23 5.19
305 306 9.752961 TCAATTTACTTAAACTGGTTTTTAGCC 57.247 29.630 4.01 0.00 34.23 3.93
341 342 9.757227 TCAATAAAACCGTTCTCATCAATTTTT 57.243 25.926 0.00 0.00 0.00 1.94
342 343 9.757227 TTCAATAAAACCGTTCTCATCAATTTT 57.243 25.926 0.00 0.00 0.00 1.82
343 344 9.410556 CTTCAATAAAACCGTTCTCATCAATTT 57.589 29.630 0.00 0.00 0.00 1.82
344 345 8.576442 ACTTCAATAAAACCGTTCTCATCAATT 58.424 29.630 0.00 0.00 0.00 2.32
345 346 8.023128 CACTTCAATAAAACCGTTCTCATCAAT 58.977 33.333 0.00 0.00 0.00 2.57
346 347 7.359595 CACTTCAATAAAACCGTTCTCATCAA 58.640 34.615 0.00 0.00 0.00 2.57
347 348 6.072728 CCACTTCAATAAAACCGTTCTCATCA 60.073 38.462 0.00 0.00 0.00 3.07
348 349 6.148811 TCCACTTCAATAAAACCGTTCTCATC 59.851 38.462 0.00 0.00 0.00 2.92
349 350 6.001460 TCCACTTCAATAAAACCGTTCTCAT 58.999 36.000 0.00 0.00 0.00 2.90
350 351 5.369833 TCCACTTCAATAAAACCGTTCTCA 58.630 37.500 0.00 0.00 0.00 3.27
351 352 5.106673 CCTCCACTTCAATAAAACCGTTCTC 60.107 44.000 0.00 0.00 0.00 2.87
352 353 4.760204 CCTCCACTTCAATAAAACCGTTCT 59.240 41.667 0.00 0.00 0.00 3.01
353 354 4.615223 GCCTCCACTTCAATAAAACCGTTC 60.615 45.833 0.00 0.00 0.00 3.95
354 355 3.254903 GCCTCCACTTCAATAAAACCGTT 59.745 43.478 0.00 0.00 0.00 4.44
355 356 2.817844 GCCTCCACTTCAATAAAACCGT 59.182 45.455 0.00 0.00 0.00 4.83
356 357 2.159572 CGCCTCCACTTCAATAAAACCG 60.160 50.000 0.00 0.00 0.00 4.44
357 358 3.078837 TCGCCTCCACTTCAATAAAACC 58.921 45.455 0.00 0.00 0.00 3.27
358 359 4.636206 AGATCGCCTCCACTTCAATAAAAC 59.364 41.667 0.00 0.00 0.00 2.43
359 360 4.843728 AGATCGCCTCCACTTCAATAAAA 58.156 39.130 0.00 0.00 0.00 1.52
360 361 4.487714 AGATCGCCTCCACTTCAATAAA 57.512 40.909 0.00 0.00 0.00 1.40
361 362 4.487714 AAGATCGCCTCCACTTCAATAA 57.512 40.909 0.00 0.00 0.00 1.40
362 363 4.202223 GGTAAGATCGCCTCCACTTCAATA 60.202 45.833 0.00 0.00 0.00 1.90
363 364 3.432326 GGTAAGATCGCCTCCACTTCAAT 60.432 47.826 0.00 0.00 0.00 2.57
364 365 2.093658 GGTAAGATCGCCTCCACTTCAA 60.094 50.000 0.00 0.00 0.00 2.69
365 366 1.480954 GGTAAGATCGCCTCCACTTCA 59.519 52.381 0.00 0.00 0.00 3.02
366 367 1.480954 TGGTAAGATCGCCTCCACTTC 59.519 52.381 5.79 0.00 0.00 3.01
367 368 1.568504 TGGTAAGATCGCCTCCACTT 58.431 50.000 5.79 0.00 0.00 3.16
368 369 1.207329 GTTGGTAAGATCGCCTCCACT 59.793 52.381 5.79 0.00 0.00 4.00
369 370 1.207329 AGTTGGTAAGATCGCCTCCAC 59.793 52.381 5.79 1.62 0.00 4.02
370 371 1.568504 AGTTGGTAAGATCGCCTCCA 58.431 50.000 5.79 2.68 0.00 3.86
371 372 2.168728 AGAAGTTGGTAAGATCGCCTCC 59.831 50.000 5.79 0.40 0.00 4.30
372 373 3.528597 AGAAGTTGGTAAGATCGCCTC 57.471 47.619 5.79 0.90 0.00 4.70
373 374 3.983044 AAGAAGTTGGTAAGATCGCCT 57.017 42.857 5.79 0.00 0.00 5.52
374 375 5.372547 AAAAAGAAGTTGGTAAGATCGCC 57.627 39.130 0.00 0.00 0.00 5.54
393 394 8.204836 GTGCCCTGATAATCTCTACTCTAAAAA 58.795 37.037 0.00 0.00 0.00 1.94
394 395 7.344612 TGTGCCCTGATAATCTCTACTCTAAAA 59.655 37.037 0.00 0.00 0.00 1.52
395 396 6.839134 TGTGCCCTGATAATCTCTACTCTAAA 59.161 38.462 0.00 0.00 0.00 1.85
396 397 6.373759 TGTGCCCTGATAATCTCTACTCTAA 58.626 40.000 0.00 0.00 0.00 2.10
397 398 5.953571 TGTGCCCTGATAATCTCTACTCTA 58.046 41.667 0.00 0.00 0.00 2.43
398 399 4.809193 TGTGCCCTGATAATCTCTACTCT 58.191 43.478 0.00 0.00 0.00 3.24
399 400 5.736951 ATGTGCCCTGATAATCTCTACTC 57.263 43.478 0.00 0.00 0.00 2.59
400 401 5.367937 ACAATGTGCCCTGATAATCTCTACT 59.632 40.000 0.00 0.00 0.00 2.57
401 402 5.615289 ACAATGTGCCCTGATAATCTCTAC 58.385 41.667 0.00 0.00 0.00 2.59
402 403 5.894298 ACAATGTGCCCTGATAATCTCTA 57.106 39.130 0.00 0.00 0.00 2.43
403 404 4.785346 ACAATGTGCCCTGATAATCTCT 57.215 40.909 0.00 0.00 0.00 3.10
404 405 5.368145 TGTACAATGTGCCCTGATAATCTC 58.632 41.667 0.00 0.00 0.00 2.75
405 406 5.372343 TGTACAATGTGCCCTGATAATCT 57.628 39.130 0.00 0.00 0.00 2.40
406 407 5.506317 GCTTGTACAATGTGCCCTGATAATC 60.506 44.000 9.13 0.00 0.00 1.75
407 408 4.339247 GCTTGTACAATGTGCCCTGATAAT 59.661 41.667 9.13 0.00 0.00 1.28
408 409 3.694072 GCTTGTACAATGTGCCCTGATAA 59.306 43.478 9.13 0.00 0.00 1.75
409 410 3.278574 GCTTGTACAATGTGCCCTGATA 58.721 45.455 9.13 0.00 0.00 2.15
410 411 2.094675 GCTTGTACAATGTGCCCTGAT 58.905 47.619 9.13 0.00 0.00 2.90
411 412 1.202867 TGCTTGTACAATGTGCCCTGA 60.203 47.619 9.13 0.00 0.00 3.86
412 413 1.246649 TGCTTGTACAATGTGCCCTG 58.753 50.000 9.13 0.00 0.00 4.45
413 414 1.993956 TTGCTTGTACAATGTGCCCT 58.006 45.000 9.13 0.00 0.00 5.19
414 415 2.230992 TGATTGCTTGTACAATGTGCCC 59.769 45.455 9.13 2.84 40.31 5.36
415 416 3.504863 CTGATTGCTTGTACAATGTGCC 58.495 45.455 9.13 0.07 40.31 5.01
416 417 2.919229 GCTGATTGCTTGTACAATGTGC 59.081 45.455 9.13 9.94 40.31 4.57
417 418 3.192001 AGGCTGATTGCTTGTACAATGTG 59.808 43.478 9.13 0.00 40.31 3.21
418 419 3.424703 AGGCTGATTGCTTGTACAATGT 58.575 40.909 9.13 0.00 40.31 2.71
419 420 3.441222 TGAGGCTGATTGCTTGTACAATG 59.559 43.478 9.13 4.83 40.31 2.82
420 421 3.689347 TGAGGCTGATTGCTTGTACAAT 58.311 40.909 9.13 0.00 42.88 2.71
421 422 3.138884 TGAGGCTGATTGCTTGTACAA 57.861 42.857 8.28 8.28 42.39 2.41
422 423 2.857186 TGAGGCTGATTGCTTGTACA 57.143 45.000 0.00 0.00 42.39 2.90
423 424 4.708726 ATTTGAGGCTGATTGCTTGTAC 57.291 40.909 0.00 0.00 42.39 2.90
424 425 7.282585 ACTATATTTGAGGCTGATTGCTTGTA 58.717 34.615 0.00 0.00 42.39 2.41
425 426 6.125029 ACTATATTTGAGGCTGATTGCTTGT 58.875 36.000 0.00 0.00 42.39 3.16
426 427 6.630444 ACTATATTTGAGGCTGATTGCTTG 57.370 37.500 0.00 0.00 42.39 4.01
427 428 7.512992 AGTACTATATTTGAGGCTGATTGCTT 58.487 34.615 0.00 0.00 42.39 3.91
428 429 7.072263 AGTACTATATTTGAGGCTGATTGCT 57.928 36.000 0.00 0.00 42.39 3.91
429 430 6.370166 GGAGTACTATATTTGAGGCTGATTGC 59.630 42.308 0.00 0.00 41.94 3.56
430 431 6.876257 GGGAGTACTATATTTGAGGCTGATTG 59.124 42.308 0.00 0.00 0.00 2.67
431 432 6.789959 AGGGAGTACTATATTTGAGGCTGATT 59.210 38.462 0.00 0.00 0.00 2.57
432 433 6.326970 AGGGAGTACTATATTTGAGGCTGAT 58.673 40.000 0.00 0.00 0.00 2.90
433 434 5.716979 AGGGAGTACTATATTTGAGGCTGA 58.283 41.667 0.00 0.00 0.00 4.26
434 435 5.777732 AGAGGGAGTACTATATTTGAGGCTG 59.222 44.000 0.00 0.00 0.00 4.85
435 436 5.777732 CAGAGGGAGTACTATATTTGAGGCT 59.222 44.000 0.00 0.00 0.00 4.58
436 437 5.540719 ACAGAGGGAGTACTATATTTGAGGC 59.459 44.000 0.00 0.00 0.00 4.70
437 438 7.007723 AGACAGAGGGAGTACTATATTTGAGG 58.992 42.308 0.00 0.00 0.00 3.86
438 439 7.721842 TGAGACAGAGGGAGTACTATATTTGAG 59.278 40.741 0.00 0.00 0.00 3.02
439 440 7.583625 TGAGACAGAGGGAGTACTATATTTGA 58.416 38.462 0.00 0.00 0.00 2.69
440 441 7.825331 TGAGACAGAGGGAGTACTATATTTG 57.175 40.000 0.00 0.00 0.00 2.32
451 452 9.197694 CGTTTTTATATTATGAGACAGAGGGAG 57.802 37.037 0.00 0.00 0.00 4.30
452 453 8.701895 ACGTTTTTATATTATGAGACAGAGGGA 58.298 33.333 0.00 0.00 0.00 4.20
453 454 8.888579 ACGTTTTTATATTATGAGACAGAGGG 57.111 34.615 0.00 0.00 0.00 4.30
466 467 9.251792 GGGAGTTGACAAAAACGTTTTTATATT 57.748 29.630 32.12 19.39 38.23 1.28
467 468 8.635328 AGGGAGTTGACAAAAACGTTTTTATAT 58.365 29.630 32.12 22.38 38.23 0.86
468 469 7.998580 AGGGAGTTGACAAAAACGTTTTTATA 58.001 30.769 32.12 20.50 38.23 0.98
469 470 6.869695 AGGGAGTTGACAAAAACGTTTTTAT 58.130 32.000 32.12 25.13 38.23 1.40
470 471 6.270156 AGGGAGTTGACAAAAACGTTTTTA 57.730 33.333 32.12 18.43 38.23 1.52
471 472 5.142061 AGGGAGTTGACAAAAACGTTTTT 57.858 34.783 28.62 28.62 40.75 1.94
472 473 4.381185 GGAGGGAGTTGACAAAAACGTTTT 60.381 41.667 20.26 20.26 35.13 2.43
473 474 3.129813 GGAGGGAGTTGACAAAAACGTTT 59.870 43.478 7.96 7.96 35.13 3.60
474 475 2.686405 GGAGGGAGTTGACAAAAACGTT 59.314 45.455 0.00 0.00 35.13 3.99
475 476 2.294979 GGAGGGAGTTGACAAAAACGT 58.705 47.619 0.00 0.00 35.13 3.99
476 477 1.263217 CGGAGGGAGTTGACAAAAACG 59.737 52.381 0.00 0.00 35.13 3.60
477 478 2.289820 GACGGAGGGAGTTGACAAAAAC 59.710 50.000 0.00 0.00 0.00 2.43
478 479 2.171870 AGACGGAGGGAGTTGACAAAAA 59.828 45.455 0.00 0.00 0.00 1.94
479 480 1.766496 AGACGGAGGGAGTTGACAAAA 59.234 47.619 0.00 0.00 0.00 2.44
480 481 1.343465 GAGACGGAGGGAGTTGACAAA 59.657 52.381 0.00 0.00 0.00 2.83
481 482 0.966920 GAGACGGAGGGAGTTGACAA 59.033 55.000 0.00 0.00 0.00 3.18
482 483 0.178973 TGAGACGGAGGGAGTTGACA 60.179 55.000 0.00 0.00 0.00 3.58
483 484 1.187087 ATGAGACGGAGGGAGTTGAC 58.813 55.000 0.00 0.00 0.00 3.18
484 485 2.820728 TATGAGACGGAGGGAGTTGA 57.179 50.000 0.00 0.00 0.00 3.18
485 486 5.730296 ATATTATGAGACGGAGGGAGTTG 57.270 43.478 0.00 0.00 0.00 3.16
486 487 7.239438 TCTTATATTATGAGACGGAGGGAGTT 58.761 38.462 0.00 0.00 0.00 3.01
487 488 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
488 489 6.183360 GCTCTTATATTATGAGACGGAGGGAG 60.183 46.154 0.00 0.00 33.20 4.30
489 490 5.652891 GCTCTTATATTATGAGACGGAGGGA 59.347 44.000 0.00 0.00 33.20 4.20
490 491 5.449314 CGCTCTTATATTATGAGACGGAGGG 60.449 48.000 0.00 0.00 33.20 4.30
491 492 5.574082 CGCTCTTATATTATGAGACGGAGG 58.426 45.833 0.00 0.00 33.20 4.30
492 493 5.031578 GCGCTCTTATATTATGAGACGGAG 58.968 45.833 0.00 0.00 34.00 4.63
493 494 4.700692 AGCGCTCTTATATTATGAGACGGA 59.299 41.667 2.64 0.00 34.00 4.69
494 495 4.987832 AGCGCTCTTATATTATGAGACGG 58.012 43.478 2.64 5.37 34.00 4.79
495 496 5.874831 AGAGCGCTCTTATATTATGAGACG 58.125 41.667 33.83 12.06 36.31 4.18
509 510 4.142359 CGTCCCATAATATAAGAGCGCTCT 60.142 45.833 33.83 33.83 42.75 4.09
510 511 4.106197 CGTCCCATAATATAAGAGCGCTC 58.894 47.826 30.01 30.01 0.00 5.03
511 512 3.119101 CCGTCCCATAATATAAGAGCGCT 60.119 47.826 11.27 11.27 0.00 5.92
512 513 3.119245 TCCGTCCCATAATATAAGAGCGC 60.119 47.826 0.00 0.00 0.00 5.92
513 514 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
514 515 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
515 516 5.127356 GTCCCTCCGTCCCATAATATAAGAG 59.873 48.000 0.00 0.00 0.00 2.85
516 517 5.021458 GTCCCTCCGTCCCATAATATAAGA 58.979 45.833 0.00 0.00 0.00 2.10
517 518 5.024118 AGTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
518 519 5.019657 AGTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
519 520 4.687262 AGTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
520 521 3.562108 AGTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
521 522 3.400322 ACTAGTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
522 523 2.179424 ACTAGTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
523 524 1.572415 ACTAGTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
524 525 1.229131 ACTAGTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
525 526 1.133544 GTACTAGTCCCTCCGTCCCAT 60.134 57.143 0.00 0.00 0.00 4.00
526 527 0.257039 GTACTAGTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
527 528 0.550432 AGTACTAGTCCCTCCGTCCC 59.450 60.000 0.00 0.00 0.00 4.46
528 529 2.224499 CCTAGTACTAGTCCCTCCGTCC 60.224 59.091 24.84 0.00 0.00 4.79
529 530 2.810032 GCCTAGTACTAGTCCCTCCGTC 60.810 59.091 24.84 4.63 0.00 4.79
530 531 1.142667 GCCTAGTACTAGTCCCTCCGT 59.857 57.143 24.84 0.00 0.00 4.69
531 532 1.877258 CGCCTAGTACTAGTCCCTCCG 60.877 61.905 24.84 14.37 0.00 4.63
532 533 1.419387 TCGCCTAGTACTAGTCCCTCC 59.581 57.143 24.84 8.02 0.00 4.30
533 534 2.769893 CTCGCCTAGTACTAGTCCCTC 58.230 57.143 24.84 10.03 0.00 4.30
534 535 1.202794 GCTCGCCTAGTACTAGTCCCT 60.203 57.143 24.84 0.00 0.00 4.20
535 536 1.202794 AGCTCGCCTAGTACTAGTCCC 60.203 57.143 24.84 13.57 0.00 4.46
536 537 2.145536 GAGCTCGCCTAGTACTAGTCC 58.854 57.143 24.84 15.67 0.00 3.85
537 538 2.836262 TGAGCTCGCCTAGTACTAGTC 58.164 52.381 24.84 14.25 0.00 2.59
538 539 3.118334 TCTTGAGCTCGCCTAGTACTAGT 60.118 47.826 24.84 8.43 0.00 2.57
539 540 3.468770 TCTTGAGCTCGCCTAGTACTAG 58.531 50.000 21.11 21.11 0.00 2.57
540 541 3.555527 TCTTGAGCTCGCCTAGTACTA 57.444 47.619 9.64 1.89 0.00 1.82
541 542 2.421751 TCTTGAGCTCGCCTAGTACT 57.578 50.000 9.64 0.00 0.00 2.73
542 543 3.505464 TTTCTTGAGCTCGCCTAGTAC 57.495 47.619 9.64 0.00 0.00 2.73
543 544 3.676324 GCTTTTCTTGAGCTCGCCTAGTA 60.676 47.826 9.64 0.00 37.18 1.82
544 545 2.933056 GCTTTTCTTGAGCTCGCCTAGT 60.933 50.000 9.64 0.00 37.18 2.57
545 546 1.663135 GCTTTTCTTGAGCTCGCCTAG 59.337 52.381 9.64 4.05 37.18 3.02
546 547 1.726853 GCTTTTCTTGAGCTCGCCTA 58.273 50.000 9.64 0.00 37.18 3.93
547 548 1.294659 CGCTTTTCTTGAGCTCGCCT 61.295 55.000 9.64 0.00 37.99 5.52
548 549 1.133458 CGCTTTTCTTGAGCTCGCC 59.867 57.895 9.64 0.00 37.99 5.54
549 550 1.510833 GCGCTTTTCTTGAGCTCGC 60.511 57.895 9.64 1.67 37.99 5.03
550 551 0.451792 GTGCGCTTTTCTTGAGCTCG 60.452 55.000 9.73 0.00 37.99 5.03
551 552 0.110010 GGTGCGCTTTTCTTGAGCTC 60.110 55.000 9.73 6.82 37.99 4.09
552 553 1.845809 CGGTGCGCTTTTCTTGAGCT 61.846 55.000 9.73 0.00 37.99 4.09
553 554 1.441016 CGGTGCGCTTTTCTTGAGC 60.441 57.895 9.73 0.00 36.79 4.26
554 555 0.384725 CACGGTGCGCTTTTCTTGAG 60.385 55.000 9.73 0.00 0.00 3.02
555 556 1.646540 CACGGTGCGCTTTTCTTGA 59.353 52.632 9.73 0.00 0.00 3.02
556 557 2.010817 GCACGGTGCGCTTTTCTTG 61.011 57.895 18.35 0.00 31.71 3.02
557 558 2.331451 GCACGGTGCGCTTTTCTT 59.669 55.556 18.35 0.00 31.71 2.52
558 559 3.660111 GGCACGGTGCGCTTTTCT 61.660 61.111 25.24 0.00 46.21 2.52
559 560 3.660111 AGGCACGGTGCGCTTTTC 61.660 61.111 25.24 11.39 46.21 2.29
560 561 3.964875 CAGGCACGGTGCGCTTTT 61.965 61.111 25.24 6.92 46.21 2.27
561 562 4.927782 TCAGGCACGGTGCGCTTT 62.928 61.111 25.24 9.30 46.21 3.51
562 563 4.927782 TTCAGGCACGGTGCGCTT 62.928 61.111 25.24 11.73 46.21 4.68
563 564 4.927782 TTTCAGGCACGGTGCGCT 62.928 61.111 25.24 19.87 46.21 5.92
564 565 3.267597 ATTTTCAGGCACGGTGCGC 62.268 57.895 25.24 18.08 46.21 6.09
565 566 1.154225 GATTTTCAGGCACGGTGCG 60.154 57.895 25.24 13.68 46.21 5.34
566 567 1.212751 GGATTTTCAGGCACGGTGC 59.787 57.895 24.43 24.43 44.08 5.01
567 568 0.240945 GTGGATTTTCAGGCACGGTG 59.759 55.000 3.15 3.15 0.00 4.94
568 569 0.893727 GGTGGATTTTCAGGCACGGT 60.894 55.000 0.00 0.00 0.00 4.83
569 570 1.595093 GGGTGGATTTTCAGGCACGG 61.595 60.000 0.00 0.00 0.00 4.94
608 635 6.992664 AGAGTAGTCTGATTGCCATAGATT 57.007 37.500 0.00 0.00 0.00 2.40
647 675 2.582436 CCGGCGCTTAGGGAAGAA 59.418 61.111 7.64 0.00 34.25 2.52
654 682 4.856801 ACCATGGCCGGCGCTTAG 62.857 66.667 22.54 10.52 34.44 2.18
655 683 3.929334 AAACCATGGCCGGCGCTTA 62.929 57.895 22.54 7.10 34.44 3.09
789 824 1.535028 AGTGTGTGTGTGTGTGTGTTG 59.465 47.619 0.00 0.00 0.00 3.33
790 825 1.890876 AGTGTGTGTGTGTGTGTGTT 58.109 45.000 0.00 0.00 0.00 3.32
815 876 3.041940 GCACACGAACAGGACGGG 61.042 66.667 0.00 0.00 40.19 5.28
833 894 4.038883 GGGACTATGGATAAGCACTACGTT 59.961 45.833 0.00 0.00 0.00 3.99
837 898 5.540337 CAGAAGGGACTATGGATAAGCACTA 59.460 44.000 0.00 0.00 38.49 2.74
852 913 0.040067 CTTTGCGTTGCAGAAGGGAC 60.040 55.000 0.00 0.00 40.61 4.46
910 972 9.593565 TTATATGGGTGGAGCTATATATGAGAG 57.406 37.037 0.00 0.00 0.00 3.20
929 991 2.993899 GCCTTCGATGACGGTTATATGG 59.006 50.000 0.00 0.00 40.21 2.74
1458 1545 7.872483 TGCATCATATAGTACTACAACATGTGG 59.128 37.037 4.31 0.00 34.79 4.17
1465 1552 9.034800 TGGATCATGCATCATATAGTACTACAA 57.965 33.333 4.31 0.00 32.33 2.41
1466 1553 8.593945 TGGATCATGCATCATATAGTACTACA 57.406 34.615 4.31 0.00 32.33 2.74
1470 1557 9.351570 CGATATGGATCATGCATCATATAGTAC 57.648 37.037 15.07 5.89 32.33 2.73
1471 1558 9.300681 TCGATATGGATCATGCATCATATAGTA 57.699 33.333 15.07 5.21 32.33 1.82
1472 1559 8.087136 GTCGATATGGATCATGCATCATATAGT 58.913 37.037 15.07 0.00 32.33 2.12
1473 1560 8.086522 TGTCGATATGGATCATGCATCATATAG 58.913 37.037 15.07 14.87 32.33 1.31
1474 1561 7.954835 TGTCGATATGGATCATGCATCATATA 58.045 34.615 15.07 0.00 32.33 0.86
1475 1562 6.823497 TGTCGATATGGATCATGCATCATAT 58.177 36.000 15.03 15.03 32.33 1.78
1700 1794 2.004583 TGATCGCTTACTTGGTTCGG 57.995 50.000 0.00 0.00 0.00 4.30
1751 1848 6.016024 GGATTCTTGTAGCCATGCATGAATTA 60.016 38.462 28.31 13.45 42.18 1.40
1752 1849 5.221382 GGATTCTTGTAGCCATGCATGAATT 60.221 40.000 28.31 14.43 42.18 2.17
1756 1853 2.953648 TGGATTCTTGTAGCCATGCATG 59.046 45.455 20.19 20.19 0.00 4.06
1759 1856 3.019564 ACTTGGATTCTTGTAGCCATGC 58.980 45.455 0.00 0.00 0.00 4.06
1801 1898 4.640855 ACGTCACCGTCGTGCTGG 62.641 66.667 0.00 0.00 46.28 4.85
1985 2082 1.455849 CTTCACCTTGGCCTCCACA 59.544 57.895 3.32 0.00 30.78 4.17
2223 2320 1.227999 ACGTCACCAAACATCCAGCG 61.228 55.000 0.00 0.00 0.00 5.18
2292 2393 3.285484 GGTCCTGCATCTTGTTGATCAT 58.715 45.455 0.00 0.00 32.05 2.45
2432 2533 1.366366 CCTGTCCGACACGTCCTTT 59.634 57.895 0.00 0.00 0.00 3.11
2852 2953 0.692419 CCTCTGGGCTCAGGTGGTAT 60.692 60.000 15.13 0.00 41.23 2.73
3052 3153 1.404391 TGGAACCTCGTCGCTTCTATC 59.596 52.381 0.00 0.00 0.00 2.08
3084 3197 7.227512 GCGTCCTAATCCTAACTACTGTACTTA 59.772 40.741 0.00 0.00 0.00 2.24
3087 3200 5.559799 CGCGTCCTAATCCTAACTACTGTAC 60.560 48.000 0.00 0.00 0.00 2.90
3097 3210 1.096967 TCACGCGCGTCCTAATCCTA 61.097 55.000 35.61 6.91 0.00 2.94
3098 3211 2.104331 CACGCGCGTCCTAATCCT 59.896 61.111 35.61 4.90 0.00 3.24
3099 3212 2.103538 TCACGCGCGTCCTAATCC 59.896 61.111 35.61 0.00 0.00 3.01
3101 3214 1.141019 ATGTCACGCGCGTCCTAAT 59.859 52.632 35.61 20.72 0.00 1.73
3223 3338 2.350522 ACCTGCTAATTCTTGCTCACG 58.649 47.619 0.00 0.00 0.00 4.35
3226 3341 6.051717 TCTTGATACCTGCTAATTCTTGCTC 58.948 40.000 0.00 0.00 0.00 4.26
3228 3343 6.540189 TCTTCTTGATACCTGCTAATTCTTGC 59.460 38.462 0.00 0.00 0.00 4.01
3260 3376 9.301897 GGCCTCCAAATTATCTGACTTAATAAT 57.698 33.333 0.00 0.00 31.07 1.28
3261 3377 8.278639 TGGCCTCCAAATTATCTGACTTAATAA 58.721 33.333 3.32 0.00 0.00 1.40
3262 3378 7.811282 TGGCCTCCAAATTATCTGACTTAATA 58.189 34.615 3.32 0.00 0.00 0.98
3263 3379 6.672593 TGGCCTCCAAATTATCTGACTTAAT 58.327 36.000 3.32 0.00 0.00 1.40
3264 3380 6.073447 TGGCCTCCAAATTATCTGACTTAA 57.927 37.500 3.32 0.00 0.00 1.85
3265 3381 5.708736 TGGCCTCCAAATTATCTGACTTA 57.291 39.130 3.32 0.00 0.00 2.24
3266 3382 4.591321 TGGCCTCCAAATTATCTGACTT 57.409 40.909 3.32 0.00 0.00 3.01
3267 3383 4.803329 ATGGCCTCCAAATTATCTGACT 57.197 40.909 3.32 0.00 36.95 3.41
3268 3384 4.038402 CCAATGGCCTCCAAATTATCTGAC 59.962 45.833 3.32 0.00 36.95 3.51
3269 3385 4.217510 CCAATGGCCTCCAAATTATCTGA 58.782 43.478 3.32 0.00 36.95 3.27
3270 3386 3.243975 GCCAATGGCCTCCAAATTATCTG 60.244 47.826 14.47 0.00 44.06 2.90
3271 3387 2.967887 GCCAATGGCCTCCAAATTATCT 59.032 45.455 14.47 0.00 44.06 1.98
3272 3388 3.391506 GCCAATGGCCTCCAAATTATC 57.608 47.619 14.47 0.00 44.06 1.75
3285 3401 1.134907 GGCTCTTTGTGATGCCAATGG 60.135 52.381 0.00 0.00 44.34 3.16
3286 3402 1.134907 GGGCTCTTTGTGATGCCAATG 60.135 52.381 5.21 0.00 46.53 2.82
3287 3403 1.188863 GGGCTCTTTGTGATGCCAAT 58.811 50.000 5.21 0.00 46.53 3.16
3288 3404 0.112995 AGGGCTCTTTGTGATGCCAA 59.887 50.000 5.21 0.00 46.53 4.52
3289 3405 0.322816 GAGGGCTCTTTGTGATGCCA 60.323 55.000 5.21 0.00 46.53 4.92
3290 3406 0.034670 AGAGGGCTCTTTGTGATGCC 60.035 55.000 0.00 0.00 44.22 4.40
3291 3407 1.339438 TGAGAGGGCTCTTTGTGATGC 60.339 52.381 0.00 0.00 40.61 3.91
3292 3408 2.027377 AGTGAGAGGGCTCTTTGTGATG 60.027 50.000 0.00 0.00 40.61 3.07
3293 3409 2.264455 AGTGAGAGGGCTCTTTGTGAT 58.736 47.619 0.00 0.00 40.61 3.06
3294 3410 1.722034 AGTGAGAGGGCTCTTTGTGA 58.278 50.000 0.00 0.00 40.61 3.58
3295 3411 3.594134 CTTAGTGAGAGGGCTCTTTGTG 58.406 50.000 0.00 0.00 40.61 3.33
3296 3412 2.569404 CCTTAGTGAGAGGGCTCTTTGT 59.431 50.000 0.00 0.00 40.61 2.83
3297 3413 2.679349 GCCTTAGTGAGAGGGCTCTTTG 60.679 54.545 0.00 0.00 40.61 2.77
3298 3414 1.557371 GCCTTAGTGAGAGGGCTCTTT 59.443 52.381 0.00 0.00 40.61 2.52
3299 3415 1.199615 GCCTTAGTGAGAGGGCTCTT 58.800 55.000 0.00 0.00 40.61 2.85
3300 3416 2.909140 GCCTTAGTGAGAGGGCTCT 58.091 57.895 0.00 0.00 43.78 4.09
3304 3420 2.435693 CGGGGCCTTAGTGAGAGGG 61.436 68.421 0.84 0.00 34.75 4.30
3305 3421 1.265454 AACGGGGCCTTAGTGAGAGG 61.265 60.000 0.84 0.00 37.35 3.69
3306 3422 0.613777 AAACGGGGCCTTAGTGAGAG 59.386 55.000 0.84 0.00 0.00 3.20
3307 3423 0.323629 CAAACGGGGCCTTAGTGAGA 59.676 55.000 0.84 0.00 0.00 3.27
3308 3424 0.323629 TCAAACGGGGCCTTAGTGAG 59.676 55.000 0.84 0.00 0.00 3.51
3309 3425 0.988832 ATCAAACGGGGCCTTAGTGA 59.011 50.000 0.84 3.11 0.00 3.41
3310 3426 2.561569 CTATCAAACGGGGCCTTAGTG 58.438 52.381 0.84 0.00 0.00 2.74
3311 3427 1.134189 GCTATCAAACGGGGCCTTAGT 60.134 52.381 0.84 0.00 0.00 2.24
3312 3428 1.134220 TGCTATCAAACGGGGCCTTAG 60.134 52.381 0.84 0.00 0.00 2.18
3313 3429 0.913205 TGCTATCAAACGGGGCCTTA 59.087 50.000 0.84 0.00 0.00 2.69
3314 3430 0.039035 TTGCTATCAAACGGGGCCTT 59.961 50.000 0.84 0.00 0.00 4.35
3315 3431 0.039035 TTTGCTATCAAACGGGGCCT 59.961 50.000 0.84 0.00 37.28 5.19
3316 3432 0.455815 CTTTGCTATCAAACGGGGCC 59.544 55.000 0.00 0.00 37.28 5.80
3317 3433 1.173913 ACTTTGCTATCAAACGGGGC 58.826 50.000 0.00 0.00 37.28 5.80
3318 3434 5.576447 AAATACTTTGCTATCAAACGGGG 57.424 39.130 0.00 0.00 37.28 5.73
3370 3486 7.849904 AGATGGAAGGAGGGAGTAGTATTTTAA 59.150 37.037 0.00 0.00 0.00 1.52
3378 3494 7.294584 CCTATATAGATGGAAGGAGGGAGTAG 58.705 46.154 11.53 0.00 0.00 2.57
3381 3497 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
3382 3498 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
3383 3499 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
3384 3500 4.889780 AGCCCTATATAGATGGAAGGAGG 58.110 47.826 11.53 1.87 0.00 4.30
3385 3501 7.979786 TTAAGCCCTATATAGATGGAAGGAG 57.020 40.000 11.53 0.00 0.00 3.69
3386 3502 7.147479 GCATTAAGCCCTATATAGATGGAAGGA 60.147 40.741 11.53 0.00 37.23 3.36
3387 3503 6.995091 GCATTAAGCCCTATATAGATGGAAGG 59.005 42.308 11.53 3.94 37.23 3.46
3388 3504 6.703607 CGCATTAAGCCCTATATAGATGGAAG 59.296 42.308 11.53 0.00 41.38 3.46
3389 3505 6.156256 ACGCATTAAGCCCTATATAGATGGAA 59.844 38.462 11.53 0.00 41.38 3.53
3390 3506 5.661312 ACGCATTAAGCCCTATATAGATGGA 59.339 40.000 11.53 0.00 41.38 3.41
3391 3507 5.918608 ACGCATTAAGCCCTATATAGATGG 58.081 41.667 11.53 6.04 41.38 3.51
3392 3508 7.849804 AAACGCATTAAGCCCTATATAGATG 57.150 36.000 11.53 6.87 41.38 2.90
3393 3509 8.863872 AAAAACGCATTAAGCCCTATATAGAT 57.136 30.769 11.53 0.00 41.38 1.98
3394 3510 7.117236 CGAAAAACGCATTAAGCCCTATATAGA 59.883 37.037 11.53 0.00 41.38 1.98
3395 3511 7.117236 TCGAAAAACGCATTAAGCCCTATATAG 59.883 37.037 2.46 2.46 41.38 1.31
3396 3512 6.930164 TCGAAAAACGCATTAAGCCCTATATA 59.070 34.615 0.00 0.00 41.38 0.86
3397 3513 5.761234 TCGAAAAACGCATTAAGCCCTATAT 59.239 36.000 0.00 0.00 41.38 0.86
3398 3514 5.117584 TCGAAAAACGCATTAAGCCCTATA 58.882 37.500 0.00 0.00 41.38 1.31
3399 3515 3.942748 TCGAAAAACGCATTAAGCCCTAT 59.057 39.130 0.00 0.00 41.38 2.57
3400 3516 3.336468 TCGAAAAACGCATTAAGCCCTA 58.664 40.909 0.00 0.00 41.38 3.53
3401 3517 2.156098 TCGAAAAACGCATTAAGCCCT 58.844 42.857 0.00 0.00 41.38 5.19
3402 3518 2.515912 CTCGAAAAACGCATTAAGCCC 58.484 47.619 0.00 0.00 41.38 5.19
3403 3519 2.515912 CCTCGAAAAACGCATTAAGCC 58.484 47.619 0.00 0.00 41.38 4.35
3404 3520 1.911464 GCCTCGAAAAACGCATTAAGC 59.089 47.619 0.00 0.00 42.26 3.09
3405 3521 3.471495 AGCCTCGAAAAACGCATTAAG 57.529 42.857 0.00 0.00 42.26 1.85
3406 3522 4.453136 AGTTAGCCTCGAAAAACGCATTAA 59.547 37.500 0.00 0.00 42.26 1.40
3407 3523 3.998341 AGTTAGCCTCGAAAAACGCATTA 59.002 39.130 0.00 0.00 42.26 1.90
3408 3524 2.812011 AGTTAGCCTCGAAAAACGCATT 59.188 40.909 0.00 0.00 42.26 3.56
3409 3525 2.423577 AGTTAGCCTCGAAAAACGCAT 58.576 42.857 0.00 0.00 42.26 4.73
3410 3526 1.873698 AGTTAGCCTCGAAAAACGCA 58.126 45.000 0.00 0.00 42.26 5.24
3411 3527 2.963498 AAGTTAGCCTCGAAAAACGC 57.037 45.000 0.00 0.00 42.26 4.84
3412 3528 4.461992 TCAAAGTTAGCCTCGAAAAACG 57.538 40.909 0.00 0.00 44.09 3.60
3413 3529 5.997385 TGATCAAAGTTAGCCTCGAAAAAC 58.003 37.500 0.00 0.00 0.00 2.43
3414 3530 6.627395 TTGATCAAAGTTAGCCTCGAAAAA 57.373 33.333 5.45 0.00 0.00 1.94
3415 3531 6.627395 TTTGATCAAAGTTAGCCTCGAAAA 57.373 33.333 16.91 0.00 0.00 2.29
3416 3532 6.817765 ATTTGATCAAAGTTAGCCTCGAAA 57.182 33.333 24.17 0.00 33.32 3.46
3417 3533 8.506168 AATATTTGATCAAAGTTAGCCTCGAA 57.494 30.769 24.17 0.00 33.32 3.71
3418 3534 9.607988 TTAATATTTGATCAAAGTTAGCCTCGA 57.392 29.630 24.17 8.66 33.32 4.04
3422 3538 9.801873 TGCTTTAATATTTGATCAAAGTTAGCC 57.198 29.630 24.17 15.79 33.32 3.93
3453 3569 9.336171 TGCTTTGTGTAAGTTGCATATCATATA 57.664 29.630 0.00 0.00 36.19 0.86
3454 3570 8.131100 GTGCTTTGTGTAAGTTGCATATCATAT 58.869 33.333 0.00 0.00 36.19 1.78
3455 3571 7.120432 TGTGCTTTGTGTAAGTTGCATATCATA 59.880 33.333 0.00 0.00 36.19 2.15
3456 3572 6.072008 TGTGCTTTGTGTAAGTTGCATATCAT 60.072 34.615 0.00 0.00 36.19 2.45
3457 3573 5.240403 TGTGCTTTGTGTAAGTTGCATATCA 59.760 36.000 0.00 0.00 36.19 2.15
3458 3574 5.569059 GTGTGCTTTGTGTAAGTTGCATATC 59.431 40.000 0.00 0.00 36.19 1.63
3459 3575 5.460646 GTGTGCTTTGTGTAAGTTGCATAT 58.539 37.500 0.00 0.00 36.19 1.78
3460 3576 4.261405 GGTGTGCTTTGTGTAAGTTGCATA 60.261 41.667 0.00 0.00 36.19 3.14
3461 3577 3.490761 GGTGTGCTTTGTGTAAGTTGCAT 60.491 43.478 0.00 0.00 36.19 3.96
3462 3578 2.159310 GGTGTGCTTTGTGTAAGTTGCA 60.159 45.455 0.00 0.00 36.19 4.08
3463 3579 2.459934 GGTGTGCTTTGTGTAAGTTGC 58.540 47.619 0.00 0.00 36.19 4.17
3464 3580 2.096819 ACGGTGTGCTTTGTGTAAGTTG 59.903 45.455 0.00 0.00 36.19 3.16
3465 3581 2.361789 ACGGTGTGCTTTGTGTAAGTT 58.638 42.857 0.00 0.00 36.19 2.66
3466 3582 2.032680 ACGGTGTGCTTTGTGTAAGT 57.967 45.000 0.00 0.00 36.19 2.24
3467 3583 4.539509 TTAACGGTGTGCTTTGTGTAAG 57.460 40.909 0.00 0.00 36.90 2.34
3468 3584 4.959596 TTTAACGGTGTGCTTTGTGTAA 57.040 36.364 0.00 0.00 0.00 2.41
3469 3585 5.502153 AATTTAACGGTGTGCTTTGTGTA 57.498 34.783 0.00 0.00 0.00 2.90
3470 3586 4.356289 GAATTTAACGGTGTGCTTTGTGT 58.644 39.130 0.00 0.00 0.00 3.72
3471 3587 3.420576 CGAATTTAACGGTGTGCTTTGTG 59.579 43.478 0.00 0.00 0.00 3.33
3472 3588 3.065648 ACGAATTTAACGGTGTGCTTTGT 59.934 39.130 0.00 0.00 34.93 2.83
3473 3589 3.420576 CACGAATTTAACGGTGTGCTTTG 59.579 43.478 0.00 0.00 34.93 2.77
3474 3590 3.065648 ACACGAATTTAACGGTGTGCTTT 59.934 39.130 0.00 0.00 34.93 3.51
3475 3591 2.614983 ACACGAATTTAACGGTGTGCTT 59.385 40.909 0.00 0.00 34.93 3.91
3476 3592 2.032377 CACACGAATTTAACGGTGTGCT 60.032 45.455 9.81 0.00 36.70 4.40
3477 3593 2.286536 ACACACGAATTTAACGGTGTGC 60.287 45.455 19.53 0.00 41.40 4.57
3478 3594 3.284914 CACACACGAATTTAACGGTGTG 58.715 45.455 18.39 18.39 45.49 3.82
3479 3595 3.196463 TCACACACGAATTTAACGGTGT 58.804 40.909 0.00 0.00 41.61 4.16
3480 3596 3.863396 TCACACACGAATTTAACGGTG 57.137 42.857 0.00 0.00 37.66 4.94
3481 3597 4.260866 CCTTTCACACACGAATTTAACGGT 60.261 41.667 0.00 0.00 34.93 4.83
3482 3598 4.024725 TCCTTTCACACACGAATTTAACGG 60.025 41.667 0.00 0.00 34.93 4.44
3483 3599 5.085636 TCCTTTCACACACGAATTTAACG 57.914 39.130 0.00 0.00 0.00 3.18
3484 3600 4.909880 GCTCCTTTCACACACGAATTTAAC 59.090 41.667 0.00 0.00 0.00 2.01
3485 3601 4.819630 AGCTCCTTTCACACACGAATTTAA 59.180 37.500 0.00 0.00 0.00 1.52
3486 3602 4.385825 AGCTCCTTTCACACACGAATTTA 58.614 39.130 0.00 0.00 0.00 1.40
3487 3603 3.214328 AGCTCCTTTCACACACGAATTT 58.786 40.909 0.00 0.00 0.00 1.82
3488 3604 2.851195 AGCTCCTTTCACACACGAATT 58.149 42.857 0.00 0.00 0.00 2.17
3489 3605 2.550830 AGCTCCTTTCACACACGAAT 57.449 45.000 0.00 0.00 0.00 3.34
3490 3606 2.325583 AAGCTCCTTTCACACACGAA 57.674 45.000 0.00 0.00 0.00 3.85
3491 3607 2.210116 GAAAGCTCCTTTCACACACGA 58.790 47.619 11.65 0.00 46.23 4.35
3492 3608 2.670401 GAAAGCTCCTTTCACACACG 57.330 50.000 11.65 0.00 46.23 4.49
3532 3648 9.565090 ACAAGATTAATAGTACATGACATGCAT 57.435 29.630 15.49 0.00 37.85 3.96
3533 3649 8.962884 ACAAGATTAATAGTACATGACATGCA 57.037 30.769 15.49 0.00 0.00 3.96
3534 3650 9.045223 TGACAAGATTAATAGTACATGACATGC 57.955 33.333 15.49 0.11 0.00 4.06
3547 3663 8.826710 CGCCTTTGACTATTGACAAGATTAATA 58.173 33.333 0.00 0.00 0.00 0.98
3548 3664 7.201732 CCGCCTTTGACTATTGACAAGATTAAT 60.202 37.037 0.00 0.00 0.00 1.40
3549 3665 6.093495 CCGCCTTTGACTATTGACAAGATTAA 59.907 38.462 0.00 0.00 0.00 1.40
3550 3666 5.584649 CCGCCTTTGACTATTGACAAGATTA 59.415 40.000 0.00 0.00 0.00 1.75
3551 3667 4.396166 CCGCCTTTGACTATTGACAAGATT 59.604 41.667 0.00 0.00 0.00 2.40
3552 3668 3.941483 CCGCCTTTGACTATTGACAAGAT 59.059 43.478 0.00 0.00 0.00 2.40
3553 3669 3.244422 ACCGCCTTTGACTATTGACAAGA 60.244 43.478 0.00 0.00 0.00 3.02
3554 3670 3.074412 ACCGCCTTTGACTATTGACAAG 58.926 45.455 0.00 0.00 0.00 3.16
3555 3671 3.071479 GACCGCCTTTGACTATTGACAA 58.929 45.455 0.00 0.00 0.00 3.18
3556 3672 2.301870 AGACCGCCTTTGACTATTGACA 59.698 45.455 0.00 0.00 0.00 3.58
3557 3673 2.973945 AGACCGCCTTTGACTATTGAC 58.026 47.619 0.00 0.00 0.00 3.18
3558 3674 3.695830 AAGACCGCCTTTGACTATTGA 57.304 42.857 0.00 0.00 0.00 2.57
3559 3675 5.873179 TTTAAGACCGCCTTTGACTATTG 57.127 39.130 0.00 0.00 36.34 1.90
3560 3676 6.887626 TTTTTAAGACCGCCTTTGACTATT 57.112 33.333 0.00 0.00 36.34 1.73
3581 3697 9.088987 CCATTTATATAGGGCCTAATGTGTTTT 57.911 33.333 18.91 0.30 0.00 2.43
3582 3698 8.452868 TCCATTTATATAGGGCCTAATGTGTTT 58.547 33.333 18.91 1.12 0.00 2.83
3583 3699 7.995663 TCCATTTATATAGGGCCTAATGTGTT 58.004 34.615 18.91 1.94 0.00 3.32
3584 3700 7.582909 TCCATTTATATAGGGCCTAATGTGT 57.417 36.000 18.91 2.76 0.00 3.72
3585 3701 7.557719 CCTTCCATTTATATAGGGCCTAATGTG 59.442 40.741 18.91 11.57 0.00 3.21
3586 3702 7.464265 TCCTTCCATTTATATAGGGCCTAATGT 59.536 37.037 18.91 9.02 0.00 2.71
3587 3703 7.872138 TCCTTCCATTTATATAGGGCCTAATG 58.128 38.462 18.91 17.12 0.00 1.90
3588 3704 7.129504 CCTCCTTCCATTTATATAGGGCCTAAT 59.870 40.741 18.91 14.19 0.00 1.73
3589 3705 6.447084 CCTCCTTCCATTTATATAGGGCCTAA 59.553 42.308 18.91 7.61 0.00 2.69
3590 3706 5.970640 CCTCCTTCCATTTATATAGGGCCTA 59.029 44.000 17.16 17.16 0.00 3.93
3591 3707 4.790790 CCTCCTTCCATTTATATAGGGCCT 59.209 45.833 12.58 12.58 0.00 5.19
3592 3708 4.079730 CCCTCCTTCCATTTATATAGGGCC 60.080 50.000 0.00 0.00 36.30 5.80
3593 3709 4.788617 TCCCTCCTTCCATTTATATAGGGC 59.211 45.833 0.00 0.00 41.88 5.19
3594 3710 6.032693 ACTCCCTCCTTCCATTTATATAGGG 58.967 44.000 0.00 0.00 43.23 3.53
3595 3711 8.709308 CATACTCCCTCCTTCCATTTATATAGG 58.291 40.741 0.00 0.00 0.00 2.57
3596 3712 8.709308 CCATACTCCCTCCTTCCATTTATATAG 58.291 40.741 0.00 0.00 0.00 1.31
3597 3713 8.191110 ACCATACTCCCTCCTTCCATTTATATA 58.809 37.037 0.00 0.00 0.00 0.86
3598 3714 7.031917 ACCATACTCCCTCCTTCCATTTATAT 58.968 38.462 0.00 0.00 0.00 0.86
3599 3715 6.399013 ACCATACTCCCTCCTTCCATTTATA 58.601 40.000 0.00 0.00 0.00 0.98
3600 3716 5.235534 ACCATACTCCCTCCTTCCATTTAT 58.764 41.667 0.00 0.00 0.00 1.40
3601 3717 4.641868 ACCATACTCCCTCCTTCCATTTA 58.358 43.478 0.00 0.00 0.00 1.40
3602 3718 3.474920 ACCATACTCCCTCCTTCCATTT 58.525 45.455 0.00 0.00 0.00 2.32
3603 3719 3.151542 ACCATACTCCCTCCTTCCATT 57.848 47.619 0.00 0.00 0.00 3.16
3604 3720 2.897823 ACCATACTCCCTCCTTCCAT 57.102 50.000 0.00 0.00 0.00 3.41
3605 3721 2.661176 AACCATACTCCCTCCTTCCA 57.339 50.000 0.00 0.00 0.00 3.53
3606 3722 5.446260 TTAAAACCATACTCCCTCCTTCC 57.554 43.478 0.00 0.00 0.00 3.46
3607 3723 8.272889 AGTAATTAAAACCATACTCCCTCCTTC 58.727 37.037 0.00 0.00 0.00 3.46
3608 3724 8.053355 CAGTAATTAAAACCATACTCCCTCCTT 58.947 37.037 0.00 0.00 0.00 3.36
3609 3725 7.184022 ACAGTAATTAAAACCATACTCCCTCCT 59.816 37.037 0.00 0.00 0.00 3.69
3610 3726 7.282450 CACAGTAATTAAAACCATACTCCCTCC 59.718 40.741 0.00 0.00 0.00 4.30
3611 3727 8.044908 TCACAGTAATTAAAACCATACTCCCTC 58.955 37.037 0.00 0.00 0.00 4.30
3612 3728 7.924541 TCACAGTAATTAAAACCATACTCCCT 58.075 34.615 0.00 0.00 0.00 4.20
3613 3729 7.282450 CCTCACAGTAATTAAAACCATACTCCC 59.718 40.741 0.00 0.00 0.00 4.30
3614 3730 7.827729 ACCTCACAGTAATTAAAACCATACTCC 59.172 37.037 0.00 0.00 0.00 3.85
3615 3731 8.665685 CACCTCACAGTAATTAAAACCATACTC 58.334 37.037 0.00 0.00 0.00 2.59
3616 3732 8.161425 ACACCTCACAGTAATTAAAACCATACT 58.839 33.333 0.00 0.00 0.00 2.12
3617 3733 8.331730 ACACCTCACAGTAATTAAAACCATAC 57.668 34.615 0.00 0.00 0.00 2.39
3618 3734 8.927675 AACACCTCACAGTAATTAAAACCATA 57.072 30.769 0.00 0.00 0.00 2.74
3619 3735 7.833285 AACACCTCACAGTAATTAAAACCAT 57.167 32.000 0.00 0.00 0.00 3.55
3620 3736 7.339721 TCAAACACCTCACAGTAATTAAAACCA 59.660 33.333 0.00 0.00 0.00 3.67
3621 3737 7.646526 GTCAAACACCTCACAGTAATTAAAACC 59.353 37.037 0.00 0.00 0.00 3.27
3622 3738 8.403236 AGTCAAACACCTCACAGTAATTAAAAC 58.597 33.333 0.00 0.00 0.00 2.43
3623 3739 8.514330 AGTCAAACACCTCACAGTAATTAAAA 57.486 30.769 0.00 0.00 0.00 1.52
3624 3740 9.048446 GTAGTCAAACACCTCACAGTAATTAAA 57.952 33.333 0.00 0.00 0.00 1.52
3625 3741 7.658575 GGTAGTCAAACACCTCACAGTAATTAA 59.341 37.037 0.00 0.00 0.00 1.40
3649 3765 8.168058 AGTATTAATACCACAGTTTTTCTGGGT 58.832 33.333 19.74 10.83 45.43 4.51
3739 3856 3.542712 TTCTTTCGCATGCTCTGTTTC 57.457 42.857 17.13 0.00 0.00 2.78
3750 3867 1.891919 AGCAGCCGTTTCTTTCGCA 60.892 52.632 0.00 0.00 0.00 5.10
3764 3882 3.118956 ACCGAGGAAGAAGATAACAGCAG 60.119 47.826 0.00 0.00 0.00 4.24
3792 3910 0.898789 GGACAACAGGGAGGAGACGA 60.899 60.000 0.00 0.00 0.00 4.20
3800 3919 0.041238 ATCTCGAGGGACAACAGGGA 59.959 55.000 13.56 0.00 0.00 4.20
3880 3999 1.134401 GCGGGAGGATGAAGATCAACA 60.134 52.381 0.00 0.00 0.00 3.33
3882 4001 0.469917 GGCGGGAGGATGAAGATCAA 59.530 55.000 0.00 0.00 0.00 2.57
3934 4053 4.060038 TGTGCTAGCTTCTATTGTAGCC 57.940 45.455 17.23 0.00 37.66 3.93
3962 4081 2.093306 TGCGTGGTGAACTGGATTAG 57.907 50.000 0.00 0.00 0.00 1.73
4010 4129 2.234896 TCACGTAGGTAACCCATGGA 57.765 50.000 15.22 0.00 37.17 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.