Multiple sequence alignment - TraesCS2D01G189000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G189000 chr2D 100.000 4266 0 0 1 4266 132694127 132698392 0.000000e+00 7878.0
1 TraesCS2D01G189000 chr2D 94.847 2193 86 12 985 3163 132293189 132295368 0.000000e+00 3398.0
2 TraesCS2D01G189000 chr2D 100.000 1660 0 0 4721 6380 132698847 132700506 0.000000e+00 3066.0
3 TraesCS2D01G189000 chr2D 98.879 803 9 0 3163 3965 62617359 62616557 0.000000e+00 1434.0
4 TraesCS2D01G189000 chr2D 83.266 1231 184 17 922 2141 131765339 131766558 0.000000e+00 1112.0
5 TraesCS2D01G189000 chr2D 91.328 738 27 14 5672 6374 132296239 132296974 0.000000e+00 974.0
6 TraesCS2D01G189000 chr2D 85.947 797 87 12 4868 5651 132295390 132296174 0.000000e+00 828.0
7 TraesCS2D01G189000 chr2D 98.635 293 4 0 3964 4256 62616466 62616174 2.640000e-143 520.0
8 TraesCS2D01G189000 chr2B 96.285 2261 51 18 922 3163 188460778 188463024 0.000000e+00 3679.0
9 TraesCS2D01G189000 chr2B 83.094 1254 182 21 922 2160 185769811 185771049 0.000000e+00 1114.0
10 TraesCS2D01G189000 chr2B 89.877 731 74 0 1 731 1656437 1657167 0.000000e+00 941.0
11 TraesCS2D01G189000 chr2B 90.108 738 36 10 5672 6374 188463884 188464619 0.000000e+00 924.0
12 TraesCS2D01G189000 chr2B 87.011 793 77 12 4867 5651 188463045 188463819 0.000000e+00 870.0
13 TraesCS2D01G189000 chr2B 90.683 644 51 5 922 1558 186375563 186374922 0.000000e+00 848.0
14 TraesCS2D01G189000 chr2B 87.708 301 37 0 3964 4264 121175743 121176043 1.020000e-92 351.0
15 TraesCS2D01G189000 chr2A 93.938 2194 103 17 981 3161 140358031 140360207 0.000000e+00 3288.0
16 TraesCS2D01G189000 chr2A 84.460 1390 181 27 887 2260 139509067 139510437 0.000000e+00 1338.0
17 TraesCS2D01G189000 chr2A 89.623 742 35 13 5672 6375 140361085 140361822 0.000000e+00 905.0
18 TraesCS2D01G189000 chr2A 90.014 731 24 20 5672 6365 139512329 139513047 0.000000e+00 900.0
19 TraesCS2D01G189000 chr2A 92.212 642 36 8 2529 3161 139510835 139511471 0.000000e+00 896.0
20 TraesCS2D01G189000 chr2A 86.318 804 78 13 4867 5651 140360230 140361020 0.000000e+00 846.0
21 TraesCS2D01G189000 chr2A 86.364 792 80 11 4867 5651 139511494 139512264 0.000000e+00 839.0
22 TraesCS2D01G189000 chr3A 94.645 803 41 2 3163 3965 169844070 169843270 0.000000e+00 1243.0
23 TraesCS2D01G189000 chr3A 88.767 730 79 2 1 730 616767381 616766655 0.000000e+00 891.0
24 TraesCS2D01G189000 chr3A 92.989 271 18 1 3964 4233 169843179 169842909 1.670000e-105 394.0
25 TraesCS2D01G189000 chr3B 94.737 798 42 0 3168 3965 777008735 777009532 0.000000e+00 1242.0
26 TraesCS2D01G189000 chr3B 92.030 803 62 2 3163 3965 598996879 598997679 0.000000e+00 1127.0
27 TraesCS2D01G189000 chr3B 89.330 731 72 4 1 731 33111050 33111774 0.000000e+00 913.0
28 TraesCS2D01G189000 chr3B 91.118 304 23 2 3964 4266 777019763 777020063 5.950000e-110 409.0
29 TraesCS2D01G189000 chr3B 87.889 289 32 1 3964 4252 598997769 598998054 2.850000e-88 337.0
30 TraesCS2D01G189000 chr1B 94.534 805 34 4 3163 3964 21430163 21429366 0.000000e+00 1234.0
31 TraesCS2D01G189000 chr1B 94.719 303 12 2 3964 4266 21429288 21428990 9.690000e-128 468.0
32 TraesCS2D01G189000 chr5D 96.986 730 22 0 1 730 332799297 332798568 0.000000e+00 1227.0
33 TraesCS2D01G189000 chr5D 96.296 729 26 1 3 731 459247622 459248349 0.000000e+00 1195.0
34 TraesCS2D01G189000 chr5D 91.563 806 65 3 3160 3965 158805725 158806527 0.000000e+00 1109.0
35 TraesCS2D01G189000 chr5D 91.418 804 64 4 3163 3965 552794467 552793668 0.000000e+00 1098.0
36 TraesCS2D01G189000 chr5D 87.043 301 31 2 3964 4264 158806618 158806910 3.690000e-87 333.0
37 TraesCS2D01G189000 chr4D 92.450 808 58 3 3158 3965 385713553 385714357 0.000000e+00 1151.0
38 TraesCS2D01G189000 chr1A 94.938 731 36 1 1 731 492265189 492264460 0.000000e+00 1144.0
39 TraesCS2D01G189000 chr7D 92.308 806 58 4 3158 3963 104747084 104746283 0.000000e+00 1142.0
40 TraesCS2D01G189000 chr7D 78.148 1199 206 41 962 2144 89944998 89943840 0.000000e+00 712.0
41 TraesCS2D01G189000 chr7D 82.671 277 45 2 5107 5383 89942243 89941970 6.390000e-60 243.0
42 TraesCS2D01G189000 chr1D 93.128 713 47 2 1 711 354510519 354509807 0.000000e+00 1044.0
43 TraesCS2D01G189000 chr1D 92.691 301 21 1 3964 4264 480956402 480956701 3.530000e-117 433.0
44 TraesCS2D01G189000 chr7B 90.872 734 64 3 1 733 503276298 503275567 0.000000e+00 981.0
45 TraesCS2D01G189000 chr7B 81.751 674 112 8 958 1629 41054516 41053852 2.600000e-153 553.0
46 TraesCS2D01G189000 chr7B 87.097 62 6 2 1489 1549 748342620 748342560 1.150000e-07 69.4
47 TraesCS2D01G189000 chr4B 90.859 733 66 1 1 732 661254121 661254853 0.000000e+00 981.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G189000 chr2D 132694127 132700506 6379 False 5472.000000 7878 100.000000 1 6380 2 chr2D.!!$F3 6379
1 TraesCS2D01G189000 chr2D 132293189 132296974 3785 False 1733.333333 3398 90.707333 985 6374 3 chr2D.!!$F2 5389
2 TraesCS2D01G189000 chr2D 131765339 131766558 1219 False 1112.000000 1112 83.266000 922 2141 1 chr2D.!!$F1 1219
3 TraesCS2D01G189000 chr2D 62616174 62617359 1185 True 977.000000 1434 98.757000 3163 4256 2 chr2D.!!$R1 1093
4 TraesCS2D01G189000 chr2B 188460778 188464619 3841 False 1824.333333 3679 91.134667 922 6374 3 chr2B.!!$F4 5452
5 TraesCS2D01G189000 chr2B 185769811 185771049 1238 False 1114.000000 1114 83.094000 922 2160 1 chr2B.!!$F3 1238
6 TraesCS2D01G189000 chr2B 1656437 1657167 730 False 941.000000 941 89.877000 1 731 1 chr2B.!!$F1 730
7 TraesCS2D01G189000 chr2B 186374922 186375563 641 True 848.000000 848 90.683000 922 1558 1 chr2B.!!$R1 636
8 TraesCS2D01G189000 chr2A 140358031 140361822 3791 False 1679.666667 3288 89.959667 981 6375 3 chr2A.!!$F2 5394
9 TraesCS2D01G189000 chr2A 139509067 139513047 3980 False 993.250000 1338 88.262500 887 6365 4 chr2A.!!$F1 5478
10 TraesCS2D01G189000 chr3A 616766655 616767381 726 True 891.000000 891 88.767000 1 730 1 chr3A.!!$R1 729
11 TraesCS2D01G189000 chr3A 169842909 169844070 1161 True 818.500000 1243 93.817000 3163 4233 2 chr3A.!!$R2 1070
12 TraesCS2D01G189000 chr3B 777008735 777009532 797 False 1242.000000 1242 94.737000 3168 3965 1 chr3B.!!$F2 797
13 TraesCS2D01G189000 chr3B 33111050 33111774 724 False 913.000000 913 89.330000 1 731 1 chr3B.!!$F1 730
14 TraesCS2D01G189000 chr3B 598996879 598998054 1175 False 732.000000 1127 89.959500 3163 4252 2 chr3B.!!$F4 1089
15 TraesCS2D01G189000 chr1B 21428990 21430163 1173 True 851.000000 1234 94.626500 3163 4266 2 chr1B.!!$R1 1103
16 TraesCS2D01G189000 chr5D 332798568 332799297 729 True 1227.000000 1227 96.986000 1 730 1 chr5D.!!$R1 729
17 TraesCS2D01G189000 chr5D 459247622 459248349 727 False 1195.000000 1195 96.296000 3 731 1 chr5D.!!$F1 728
18 TraesCS2D01G189000 chr5D 552793668 552794467 799 True 1098.000000 1098 91.418000 3163 3965 1 chr5D.!!$R2 802
19 TraesCS2D01G189000 chr5D 158805725 158806910 1185 False 721.000000 1109 89.303000 3160 4264 2 chr5D.!!$F2 1104
20 TraesCS2D01G189000 chr4D 385713553 385714357 804 False 1151.000000 1151 92.450000 3158 3965 1 chr4D.!!$F1 807
21 TraesCS2D01G189000 chr1A 492264460 492265189 729 True 1144.000000 1144 94.938000 1 731 1 chr1A.!!$R1 730
22 TraesCS2D01G189000 chr7D 104746283 104747084 801 True 1142.000000 1142 92.308000 3158 3963 1 chr7D.!!$R1 805
23 TraesCS2D01G189000 chr7D 89941970 89944998 3028 True 477.500000 712 80.409500 962 5383 2 chr7D.!!$R2 4421
24 TraesCS2D01G189000 chr1D 354509807 354510519 712 True 1044.000000 1044 93.128000 1 711 1 chr1D.!!$R1 710
25 TraesCS2D01G189000 chr7B 503275567 503276298 731 True 981.000000 981 90.872000 1 733 1 chr7B.!!$R2 732
26 TraesCS2D01G189000 chr7B 41053852 41054516 664 True 553.000000 553 81.751000 958 1629 1 chr7B.!!$R1 671
27 TraesCS2D01G189000 chr4B 661254121 661254853 732 False 981.000000 981 90.859000 1 732 1 chr4B.!!$F1 731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
740 741 0.118346 GGGGGAAAAACTGGGGGAAT 59.882 55.0 0.00 0.0 0.00 3.01 F
864 865 0.251916 TTTACCATCCCTGCACTCCG 59.748 55.0 0.00 0.0 0.00 4.63 F
881 882 0.393267 CCGAACGGGCCCTGAAATTA 60.393 55.0 22.43 0.0 0.00 1.40 F
979 983 0.400815 ACTACTCCACACCCCCACAA 60.401 55.0 0.00 0.0 0.00 3.33 F
992 997 0.955428 CCCACAACACATCCAGTCGG 60.955 60.0 0.00 0.0 0.00 4.79 F
1917 1954 0.998928 ATGGTGTTGCTGGATGGGTA 59.001 50.0 0.00 0.0 0.00 3.69 F
4978 5642 0.530288 AACAGGTTTGTGTGTGCCAC 59.470 50.0 0.00 0.0 44.78 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2366 2415 0.606096 ATTTTGCCAAGGCCCGTAAC 59.394 50.000 8.89 0.0 41.09 2.50 R
2752 3217 4.500477 GTCGCACAGAAAATGATAAATGGC 59.500 41.667 0.00 0.0 0.00 4.40 R
3097 3647 7.939039 CCAATGTATAACAGATTACAGACCCAT 59.061 37.037 0.00 0.0 32.24 4.00 R
3218 3771 5.353400 TGTGTTGTACTCCTATCTGTACTCG 59.647 44.000 0.00 0.0 39.57 4.18 R
4811 5465 1.087771 CATAGCGACACGGGGGAAAC 61.088 60.000 0.00 0.0 0.00 2.78 R
4997 5661 0.460722 TGCATTCCAAATCCGCATGG 59.539 50.000 0.00 0.0 38.09 3.66 R
6110 6846 0.673333 ATGACTCCGCGCAATGTTGA 60.673 50.000 8.75 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 4.359706 GTTTGTCCACATCAACTGAAACC 58.640 43.478 0.00 0.00 0.00 3.27
251 252 2.098607 CCGCATGCATTCATCAAACTCT 59.901 45.455 19.57 0.00 0.00 3.24
264 265 2.356695 TCAAACTCTGACAAGACGACGA 59.643 45.455 0.00 0.00 0.00 4.20
547 548 1.914108 GTCCAGTTTACCTAGGGCCTT 59.086 52.381 13.45 0.00 0.00 4.35
636 637 0.961753 CATCCTCGGGATCACGATCA 59.038 55.000 22.36 10.80 40.98 2.92
733 734 1.265905 CGAGTTTCGGGGGAAAAACTG 59.734 52.381 5.31 0.00 43.76 3.16
734 735 1.611977 GAGTTTCGGGGGAAAAACTGG 59.388 52.381 5.31 0.00 43.76 4.00
735 736 0.677288 GTTTCGGGGGAAAAACTGGG 59.323 55.000 0.00 0.00 33.57 4.45
736 737 0.470268 TTTCGGGGGAAAAACTGGGG 60.470 55.000 0.00 0.00 0.00 4.96
737 738 2.283604 CGGGGGAAAAACTGGGGG 60.284 66.667 0.00 0.00 0.00 5.40
738 739 2.847650 CGGGGGAAAAACTGGGGGA 61.848 63.158 0.00 0.00 0.00 4.81
739 740 1.549812 GGGGGAAAAACTGGGGGAA 59.450 57.895 0.00 0.00 0.00 3.97
740 741 0.118346 GGGGGAAAAACTGGGGGAAT 59.882 55.000 0.00 0.00 0.00 3.01
741 742 1.486170 GGGGGAAAAACTGGGGGAATT 60.486 52.381 0.00 0.00 0.00 2.17
742 743 2.225675 GGGGGAAAAACTGGGGGAATTA 60.226 50.000 0.00 0.00 0.00 1.40
743 744 3.522759 GGGGAAAAACTGGGGGAATTAA 58.477 45.455 0.00 0.00 0.00 1.40
744 745 4.108570 GGGGAAAAACTGGGGGAATTAAT 58.891 43.478 0.00 0.00 0.00 1.40
745 746 4.538490 GGGGAAAAACTGGGGGAATTAATT 59.462 41.667 0.00 0.00 0.00 1.40
746 747 5.727279 GGGGAAAAACTGGGGGAATTAATTA 59.273 40.000 0.00 0.00 0.00 1.40
747 748 6.215841 GGGGAAAAACTGGGGGAATTAATTAA 59.784 38.462 0.00 0.00 0.00 1.40
748 749 7.257089 GGGGAAAAACTGGGGGAATTAATTAAA 60.257 37.037 1.21 0.00 0.00 1.52
749 750 8.333235 GGGAAAAACTGGGGGAATTAATTAAAT 58.667 33.333 1.21 0.00 0.00 1.40
750 751 9.391006 GGAAAAACTGGGGGAATTAATTAAATC 57.609 33.333 1.21 3.29 0.00 2.17
751 752 9.952030 GAAAAACTGGGGGAATTAATTAAATCA 57.048 29.630 13.85 0.00 0.00 2.57
752 753 9.958180 AAAAACTGGGGGAATTAATTAAATCAG 57.042 29.630 13.85 9.42 0.00 2.90
753 754 8.909423 AAACTGGGGGAATTAATTAAATCAGA 57.091 30.769 19.19 0.00 0.00 3.27
754 755 9.506042 AAACTGGGGGAATTAATTAAATCAGAT 57.494 29.630 19.19 10.58 0.00 2.90
755 756 9.506042 AACTGGGGGAATTAATTAAATCAGATT 57.494 29.630 19.19 0.00 0.00 2.40
756 757 8.927411 ACTGGGGGAATTAATTAAATCAGATTG 58.073 33.333 19.19 5.04 0.00 2.67
757 758 7.734942 TGGGGGAATTAATTAAATCAGATTGC 58.265 34.615 13.85 3.49 0.00 3.56
758 759 7.346698 TGGGGGAATTAATTAAATCAGATTGCA 59.653 33.333 13.85 0.00 0.00 4.08
759 760 8.377799 GGGGGAATTAATTAAATCAGATTGCAT 58.622 33.333 13.85 0.00 0.00 3.96
760 761 9.428097 GGGGAATTAATTAAATCAGATTGCATC 57.572 33.333 13.85 0.00 0.00 3.91
774 775 9.664332 ATCAGATTGCATCTAAGTATACATTCC 57.336 33.333 5.50 0.00 37.58 3.01
775 776 8.874156 TCAGATTGCATCTAAGTATACATTCCT 58.126 33.333 5.50 0.00 37.58 3.36
776 777 9.499479 CAGATTGCATCTAAGTATACATTCCTT 57.501 33.333 5.50 0.00 37.58 3.36
789 790 9.588096 AGTATACATTCCTTTATTTCCCATTCC 57.412 33.333 5.50 0.00 0.00 3.01
790 791 9.362151 GTATACATTCCTTTATTTCCCATTCCA 57.638 33.333 0.00 0.00 0.00 3.53
791 792 8.852671 ATACATTCCTTTATTTCCCATTCCAA 57.147 30.769 0.00 0.00 0.00 3.53
792 793 7.566658 ACATTCCTTTATTTCCCATTCCAAA 57.433 32.000 0.00 0.00 0.00 3.28
793 794 7.623630 ACATTCCTTTATTTCCCATTCCAAAG 58.376 34.615 0.00 0.00 0.00 2.77
794 795 7.457535 ACATTCCTTTATTTCCCATTCCAAAGA 59.542 33.333 0.00 0.00 0.00 2.52
795 796 8.488668 CATTCCTTTATTTCCCATTCCAAAGAT 58.511 33.333 0.00 0.00 0.00 2.40
796 797 8.448068 TTCCTTTATTTCCCATTCCAAAGATT 57.552 30.769 0.00 0.00 0.00 2.40
797 798 8.078060 TCCTTTATTTCCCATTCCAAAGATTC 57.922 34.615 0.00 0.00 0.00 2.52
798 799 7.125659 TCCTTTATTTCCCATTCCAAAGATTCC 59.874 37.037 0.00 0.00 0.00 3.01
799 800 7.092935 CCTTTATTTCCCATTCCAAAGATTCCA 60.093 37.037 0.00 0.00 0.00 3.53
800 801 5.682234 ATTTCCCATTCCAAAGATTCCAC 57.318 39.130 0.00 0.00 0.00 4.02
801 802 4.402616 TTCCCATTCCAAAGATTCCACT 57.597 40.909 0.00 0.00 0.00 4.00
802 803 5.528600 TTCCCATTCCAAAGATTCCACTA 57.471 39.130 0.00 0.00 0.00 2.74
803 804 5.116084 TCCCATTCCAAAGATTCCACTAG 57.884 43.478 0.00 0.00 0.00 2.57
804 805 4.540099 TCCCATTCCAAAGATTCCACTAGT 59.460 41.667 0.00 0.00 0.00 2.57
805 806 4.884164 CCCATTCCAAAGATTCCACTAGTC 59.116 45.833 0.00 0.00 0.00 2.59
806 807 5.339530 CCCATTCCAAAGATTCCACTAGTCT 60.340 44.000 0.00 0.00 0.00 3.24
807 808 6.126768 CCCATTCCAAAGATTCCACTAGTCTA 60.127 42.308 0.00 0.00 0.00 2.59
808 809 7.338710 CCATTCCAAAGATTCCACTAGTCTAA 58.661 38.462 0.00 0.00 0.00 2.10
809 810 7.497249 CCATTCCAAAGATTCCACTAGTCTAAG 59.503 40.741 0.00 0.00 0.00 2.18
810 811 7.554959 TTCCAAAGATTCCACTAGTCTAAGT 57.445 36.000 0.00 0.00 0.00 2.24
811 812 8.660295 TTCCAAAGATTCCACTAGTCTAAGTA 57.340 34.615 0.00 0.00 0.00 2.24
812 813 8.660295 TCCAAAGATTCCACTAGTCTAAGTAA 57.340 34.615 0.00 0.00 0.00 2.24
813 814 9.096823 TCCAAAGATTCCACTAGTCTAAGTAAA 57.903 33.333 0.00 0.00 0.00 2.01
814 815 9.892130 CCAAAGATTCCACTAGTCTAAGTAAAT 57.108 33.333 0.00 0.00 0.00 1.40
816 817 9.804758 AAAGATTCCACTAGTCTAAGTAAATCG 57.195 33.333 0.00 0.00 36.68 3.34
817 818 8.522542 AGATTCCACTAGTCTAAGTAAATCGT 57.477 34.615 0.00 0.00 36.68 3.73
818 819 9.624373 AGATTCCACTAGTCTAAGTAAATCGTA 57.376 33.333 0.00 0.00 36.68 3.43
822 823 8.844244 TCCACTAGTCTAAGTAAATCGTATTCC 58.156 37.037 0.00 0.00 0.00 3.01
823 824 8.848182 CCACTAGTCTAAGTAAATCGTATTCCT 58.152 37.037 0.00 0.00 0.00 3.36
832 833 8.713737 AAGTAAATCGTATTCCTACAAAGTCC 57.286 34.615 0.00 0.00 0.00 3.85
833 834 7.270779 AGTAAATCGTATTCCTACAAAGTCCC 58.729 38.462 0.00 0.00 0.00 4.46
834 835 4.684484 ATCGTATTCCTACAAAGTCCCC 57.316 45.455 0.00 0.00 0.00 4.81
835 836 3.716431 TCGTATTCCTACAAAGTCCCCT 58.284 45.455 0.00 0.00 0.00 4.79
836 837 4.870636 TCGTATTCCTACAAAGTCCCCTA 58.129 43.478 0.00 0.00 0.00 3.53
837 838 5.461327 TCGTATTCCTACAAAGTCCCCTAT 58.539 41.667 0.00 0.00 0.00 2.57
838 839 5.901276 TCGTATTCCTACAAAGTCCCCTATT 59.099 40.000 0.00 0.00 0.00 1.73
839 840 6.041296 TCGTATTCCTACAAAGTCCCCTATTC 59.959 42.308 0.00 0.00 0.00 1.75
840 841 5.648330 ATTCCTACAAAGTCCCCTATTCC 57.352 43.478 0.00 0.00 0.00 3.01
841 842 4.083080 TCCTACAAAGTCCCCTATTCCA 57.917 45.455 0.00 0.00 0.00 3.53
842 843 4.641868 TCCTACAAAGTCCCCTATTCCAT 58.358 43.478 0.00 0.00 0.00 3.41
843 844 5.043762 TCCTACAAAGTCCCCTATTCCATT 58.956 41.667 0.00 0.00 0.00 3.16
844 845 5.104109 TCCTACAAAGTCCCCTATTCCATTG 60.104 44.000 0.00 0.00 0.00 2.82
845 846 4.675063 ACAAAGTCCCCTATTCCATTGT 57.325 40.909 0.00 0.00 0.00 2.71
846 847 5.010708 ACAAAGTCCCCTATTCCATTGTT 57.989 39.130 0.00 0.00 0.00 2.83
847 848 5.402630 ACAAAGTCCCCTATTCCATTGTTT 58.597 37.500 0.00 0.00 0.00 2.83
848 849 6.557568 ACAAAGTCCCCTATTCCATTGTTTA 58.442 36.000 0.00 0.00 0.00 2.01
849 850 6.436218 ACAAAGTCCCCTATTCCATTGTTTAC 59.564 38.462 0.00 0.00 0.00 2.01
850 851 5.125367 AGTCCCCTATTCCATTGTTTACC 57.875 43.478 0.00 0.00 0.00 2.85
851 852 4.542525 AGTCCCCTATTCCATTGTTTACCA 59.457 41.667 0.00 0.00 0.00 3.25
852 853 5.195756 AGTCCCCTATTCCATTGTTTACCAT 59.804 40.000 0.00 0.00 0.00 3.55
853 854 5.535030 GTCCCCTATTCCATTGTTTACCATC 59.465 44.000 0.00 0.00 0.00 3.51
854 855 4.832823 CCCCTATTCCATTGTTTACCATCC 59.167 45.833 0.00 0.00 0.00 3.51
855 856 4.832823 CCCTATTCCATTGTTTACCATCCC 59.167 45.833 0.00 0.00 0.00 3.85
856 857 5.400189 CCCTATTCCATTGTTTACCATCCCT 60.400 44.000 0.00 0.00 0.00 4.20
857 858 5.536161 CCTATTCCATTGTTTACCATCCCTG 59.464 44.000 0.00 0.00 0.00 4.45
858 859 2.733956 TCCATTGTTTACCATCCCTGC 58.266 47.619 0.00 0.00 0.00 4.85
859 860 2.042297 TCCATTGTTTACCATCCCTGCA 59.958 45.455 0.00 0.00 0.00 4.41
860 861 2.166254 CCATTGTTTACCATCCCTGCAC 59.834 50.000 0.00 0.00 0.00 4.57
861 862 2.969821 TTGTTTACCATCCCTGCACT 57.030 45.000 0.00 0.00 0.00 4.40
862 863 2.489938 TGTTTACCATCCCTGCACTC 57.510 50.000 0.00 0.00 0.00 3.51
863 864 1.004277 TGTTTACCATCCCTGCACTCC 59.996 52.381 0.00 0.00 0.00 3.85
864 865 0.251916 TTTACCATCCCTGCACTCCG 59.748 55.000 0.00 0.00 0.00 4.63
865 866 0.616395 TTACCATCCCTGCACTCCGA 60.616 55.000 0.00 0.00 0.00 4.55
866 867 0.616395 TACCATCCCTGCACTCCGAA 60.616 55.000 0.00 0.00 0.00 4.30
867 868 1.450312 CCATCCCTGCACTCCGAAC 60.450 63.158 0.00 0.00 0.00 3.95
868 869 1.811266 CATCCCTGCACTCCGAACG 60.811 63.158 0.00 0.00 0.00 3.95
869 870 3.019003 ATCCCTGCACTCCGAACGG 62.019 63.158 6.94 6.94 0.00 4.44
870 871 4.760047 CCCTGCACTCCGAACGGG 62.760 72.222 13.29 6.77 35.59 5.28
875 876 4.760047 CACTCCGAACGGGCCCTG 62.760 72.222 22.43 16.23 34.94 4.45
877 878 3.702048 CTCCGAACGGGCCCTGAA 61.702 66.667 22.43 0.00 34.94 3.02
878 879 3.243053 TCCGAACGGGCCCTGAAA 61.243 61.111 22.43 0.00 34.94 2.69
879 880 2.045340 CCGAACGGGCCCTGAAAT 60.045 61.111 22.43 0.00 0.00 2.17
880 881 1.677633 CCGAACGGGCCCTGAAATT 60.678 57.895 22.43 5.99 0.00 1.82
881 882 0.393267 CCGAACGGGCCCTGAAATTA 60.393 55.000 22.43 0.00 0.00 1.40
882 883 1.675552 CGAACGGGCCCTGAAATTAT 58.324 50.000 22.43 0.00 0.00 1.28
883 884 2.021457 CGAACGGGCCCTGAAATTATT 58.979 47.619 22.43 2.47 0.00 1.40
884 885 2.425668 CGAACGGGCCCTGAAATTATTT 59.574 45.455 22.43 1.74 0.00 1.40
885 886 3.628487 CGAACGGGCCCTGAAATTATTTA 59.372 43.478 22.43 0.00 0.00 1.40
886 887 4.277423 CGAACGGGCCCTGAAATTATTTAT 59.723 41.667 22.43 0.00 0.00 1.40
887 888 5.470777 CGAACGGGCCCTGAAATTATTTATA 59.529 40.000 22.43 0.00 0.00 0.98
888 889 6.348213 CGAACGGGCCCTGAAATTATTTATAG 60.348 42.308 22.43 0.00 0.00 1.31
889 890 5.948842 ACGGGCCCTGAAATTATTTATAGT 58.051 37.500 22.43 0.37 0.00 2.12
890 891 6.002082 ACGGGCCCTGAAATTATTTATAGTC 58.998 40.000 22.43 0.00 0.00 2.59
891 892 6.001460 CGGGCCCTGAAATTATTTATAGTCA 58.999 40.000 22.43 0.00 0.00 3.41
892 893 6.659242 CGGGCCCTGAAATTATTTATAGTCAT 59.341 38.462 22.43 0.00 0.00 3.06
893 894 7.148239 CGGGCCCTGAAATTATTTATAGTCATC 60.148 40.741 22.43 0.00 0.00 2.92
894 895 7.890655 GGGCCCTGAAATTATTTATAGTCATCT 59.109 37.037 17.04 0.00 0.00 2.90
895 896 8.951243 GGCCCTGAAATTATTTATAGTCATCTC 58.049 37.037 0.00 0.00 0.00 2.75
896 897 9.507329 GCCCTGAAATTATTTATAGTCATCTCA 57.493 33.333 0.00 0.00 0.00 3.27
918 919 3.068881 CTGGTTCTTCGGCCCTGA 58.931 61.111 0.00 0.00 0.00 3.86
948 952 3.853597 GACGGACCGGACCACACAC 62.854 68.421 22.85 5.13 0.00 3.82
949 953 3.918977 CGGACCGGACCACACACA 61.919 66.667 22.85 0.00 0.00 3.72
950 954 2.030562 GGACCGGACCACACACAG 59.969 66.667 18.62 0.00 0.00 3.66
951 955 2.803817 GGACCGGACCACACACAGT 61.804 63.158 18.62 0.00 0.00 3.55
952 956 1.300697 GACCGGACCACACACAGTC 60.301 63.158 9.46 0.00 0.00 3.51
953 957 2.355837 CCGGACCACACACAGTCG 60.356 66.667 0.00 0.00 33.66 4.18
954 958 2.725641 CGGACCACACACAGTCGA 59.274 61.111 0.00 0.00 33.66 4.20
955 959 1.660575 CGGACCACACACAGTCGAC 60.661 63.158 7.70 7.70 33.66 4.20
979 983 0.400815 ACTACTCCACACCCCCACAA 60.401 55.000 0.00 0.00 0.00 3.33
992 997 0.955428 CCCACAACACATCCAGTCGG 60.955 60.000 0.00 0.00 0.00 4.79
1224 1235 4.517934 CCCCTCCTCGGCCTCGTA 62.518 72.222 0.00 0.00 37.69 3.43
1571 1591 2.623416 TGGGCATCAGTGACGACTATAG 59.377 50.000 0.00 0.00 32.55 1.31
1712 1738 2.443255 ACTGGTTGTTTCCTGGAGATGT 59.557 45.455 0.00 0.00 0.00 3.06
1917 1954 0.998928 ATGGTGTTGCTGGATGGGTA 59.001 50.000 0.00 0.00 0.00 3.69
2366 2415 5.820423 TCCATGACTGGATGTAATAAAACCG 59.180 40.000 0.00 0.00 46.95 4.44
2606 3058 6.097270 TGGTTACTGACTAGTTAGTGTGTGTT 59.903 38.462 26.01 4.11 38.36 3.32
2752 3217 6.522625 TTAACCACAATATCACACCAATGG 57.477 37.500 0.00 0.00 0.00 3.16
3829 4387 1.103398 CGAAGCAAGCCATAAGGGGG 61.103 60.000 0.00 0.00 37.04 5.40
4827 5481 4.324991 GGTTTCCCCCGTGTCGCT 62.325 66.667 0.00 0.00 0.00 4.93
4828 5482 2.658422 GTTTCCCCCGTGTCGCTA 59.342 61.111 0.00 0.00 0.00 4.26
4829 5483 1.219935 GTTTCCCCCGTGTCGCTAT 59.780 57.895 0.00 0.00 0.00 2.97
4830 5484 1.087771 GTTTCCCCCGTGTCGCTATG 61.088 60.000 0.00 0.00 0.00 2.23
4831 5485 2.246761 TTTCCCCCGTGTCGCTATGG 62.247 60.000 0.00 0.00 0.00 2.74
4832 5486 3.151710 CCCCCGTGTCGCTATGGA 61.152 66.667 0.00 0.00 0.00 3.41
4833 5487 2.417516 CCCCGTGTCGCTATGGAG 59.582 66.667 0.00 0.00 0.00 3.86
4834 5488 2.417516 CCCGTGTCGCTATGGAGG 59.582 66.667 0.00 0.00 0.00 4.30
4835 5489 2.417516 CCGTGTCGCTATGGAGGG 59.582 66.667 0.00 0.00 36.97 4.30
4836 5490 2.279517 CGTGTCGCTATGGAGGGC 60.280 66.667 0.00 0.00 35.61 5.19
4843 5497 4.647615 CTATGGAGGGCGACGCGG 62.648 72.222 14.61 0.00 0.00 6.46
4863 5517 3.145551 GCGGGCTCGAGAGGGTTA 61.146 66.667 18.75 0.00 39.00 2.85
4864 5518 2.806237 CGGGCTCGAGAGGGTTAC 59.194 66.667 18.75 0.00 39.00 2.50
4865 5519 1.753463 CGGGCTCGAGAGGGTTACT 60.753 63.158 18.75 0.00 39.00 2.24
4913 5567 3.801594 GCTGCTCTGCTAGTTAGTGATTC 59.198 47.826 0.00 0.00 0.00 2.52
4914 5568 4.441356 GCTGCTCTGCTAGTTAGTGATTCT 60.441 45.833 0.00 0.00 0.00 2.40
4917 5571 6.467677 TGCTCTGCTAGTTAGTGATTCTTTT 58.532 36.000 0.00 0.00 0.00 2.27
4936 5590 4.320608 TTTTTGCCTCATTCCTGTCAAC 57.679 40.909 0.00 0.00 0.00 3.18
4945 5599 6.672147 CCTCATTCCTGTCAACTTTTTACAG 58.328 40.000 0.00 0.00 40.24 2.74
4946 5600 6.263168 CCTCATTCCTGTCAACTTTTTACAGT 59.737 38.462 0.00 0.00 39.17 3.55
4978 5642 0.530288 AACAGGTTTGTGTGTGCCAC 59.470 50.000 0.00 0.00 44.78 5.01
4997 5661 4.017126 CCACTTTCCTTACCAAGATTCCC 58.983 47.826 0.00 0.00 0.00 3.97
4998 5662 4.017126 CACTTTCCTTACCAAGATTCCCC 58.983 47.826 0.00 0.00 0.00 4.81
4999 5663 3.660669 ACTTTCCTTACCAAGATTCCCCA 59.339 43.478 0.00 0.00 0.00 4.96
5000 5664 4.294970 ACTTTCCTTACCAAGATTCCCCAT 59.705 41.667 0.00 0.00 0.00 4.00
5002 5666 2.091885 TCCTTACCAAGATTCCCCATGC 60.092 50.000 0.00 0.00 0.00 4.06
5051 5715 0.329596 GGTCTGACTTGGGGCTTGAT 59.670 55.000 7.85 0.00 0.00 2.57
5092 5756 2.556287 CAGGAACGTTCGGCAAGC 59.444 61.111 21.34 7.01 0.00 4.01
5101 5765 3.192954 TTCGGCAAGCCAAAGCACG 62.193 57.895 12.19 0.00 43.56 5.34
5102 5766 3.659092 CGGCAAGCCAAAGCACGA 61.659 61.111 12.19 0.00 43.56 4.35
5145 5809 1.610554 TTGTGCCTAGCCGGGTACTC 61.611 60.000 9.87 4.90 41.50 2.59
5148 5812 1.327690 TGCCTAGCCGGGTACTCAAG 61.328 60.000 9.87 0.67 0.00 3.02
5163 5827 5.122396 GGTACTCAAGCAAACTCGAATTGAT 59.878 40.000 13.24 5.35 30.13 2.57
5169 5833 4.978186 AGCAAACTCGAATTGATGTGATG 58.022 39.130 13.24 0.00 0.00 3.07
5296 5960 1.537202 GTGCCTTGAAGCTAACACAGG 59.463 52.381 0.00 2.67 0.00 4.00
5347 6011 2.787723 CAACGAAATAGACGGTGCAG 57.212 50.000 0.00 0.00 41.30 4.41
5384 6048 7.989741 CAGTGATGAAGAACTTCCATAGGTATT 59.010 37.037 11.30 0.00 38.77 1.89
5386 6050 8.616076 GTGATGAAGAACTTCCATAGGTATTTG 58.384 37.037 11.30 0.00 38.77 2.32
5393 6057 4.871871 TTCCATAGGTATTTGGAAGGCA 57.128 40.909 0.37 0.00 44.92 4.75
5394 6058 4.437682 TCCATAGGTATTTGGAAGGCAG 57.562 45.455 0.00 0.00 39.05 4.85
5416 6080 3.118531 ACTGCTTGAGGATATGGGAAGT 58.881 45.455 0.00 0.00 0.00 3.01
5417 6081 3.525199 ACTGCTTGAGGATATGGGAAGTT 59.475 43.478 0.00 0.00 0.00 2.66
5424 6088 7.442666 GCTTGAGGATATGGGAAGTTTAACTAG 59.557 40.741 0.00 0.00 0.00 2.57
5456 6120 8.830201 TCATATTTTGGACAAACAGATTTTGG 57.170 30.769 0.00 0.00 33.92 3.28
5510 6180 3.102204 GGGTGTAGGGCTAGTTGAGTAA 58.898 50.000 0.00 0.00 0.00 2.24
5522 6192 6.094048 GGCTAGTTGAGTAATGCTTCATGAAA 59.906 38.462 9.88 0.00 0.00 2.69
5529 6199 7.161404 TGAGTAATGCTTCATGAAAGTGTACT 58.839 34.615 9.88 13.68 37.31 2.73
5533 6203 4.318332 TGCTTCATGAAAGTGTACTGAGG 58.682 43.478 9.88 0.00 37.31 3.86
5554 6224 1.880027 CCTTTTGACCCTTGTTCCTCG 59.120 52.381 0.00 0.00 0.00 4.63
5564 6234 1.734465 CTTGTTCCTCGTGAAGATGCC 59.266 52.381 0.00 0.00 32.37 4.40
5578 6248 1.160137 GATGCCAGCTCGTTTCTGTT 58.840 50.000 0.00 0.00 0.00 3.16
5579 6249 2.028112 AGATGCCAGCTCGTTTCTGTTA 60.028 45.455 0.00 0.00 0.00 2.41
5580 6250 2.472695 TGCCAGCTCGTTTCTGTTAT 57.527 45.000 0.00 0.00 0.00 1.89
5581 6251 2.778299 TGCCAGCTCGTTTCTGTTATT 58.222 42.857 0.00 0.00 0.00 1.40
5582 6252 3.146066 TGCCAGCTCGTTTCTGTTATTT 58.854 40.909 0.00 0.00 0.00 1.40
5583 6253 3.568007 TGCCAGCTCGTTTCTGTTATTTT 59.432 39.130 0.00 0.00 0.00 1.82
5586 6256 5.562890 GCCAGCTCGTTTCTGTTATTTTCTT 60.563 40.000 0.00 0.00 0.00 2.52
5726 6446 7.773224 ACAGCTAGTAATGCAACATGGTTTATA 59.227 33.333 0.00 0.00 0.00 0.98
5800 6524 7.502226 TGATTTTAGAAAGCTTCTTCCTGTTCA 59.498 33.333 0.00 0.00 41.14 3.18
5833 6559 7.654520 ACACATGAAAATCTTCAATTTCTGTGG 59.345 33.333 14.01 1.33 44.64 4.17
5902 6630 3.726607 GACAAGAGATCGATGGCTGATT 58.273 45.455 0.54 0.00 0.00 2.57
6012 6744 0.602905 GCCTGGCCGGTGTGATATAC 60.603 60.000 11.58 0.00 34.25 1.47
6033 6765 1.427368 TGCCCACTAACCAATCAACCT 59.573 47.619 0.00 0.00 0.00 3.50
6090 6826 4.327680 ACAGTGGAATCTACCTTTGCTTC 58.672 43.478 0.00 0.00 0.00 3.86
6092 6828 3.589288 AGTGGAATCTACCTTTGCTTCCT 59.411 43.478 0.00 0.00 37.00 3.36
6110 6846 2.104170 CCTCTACTCCGCCTTCTCTTT 58.896 52.381 0.00 0.00 0.00 2.52
6150 6888 1.668151 GCGCCTTTCGACACCTCTT 60.668 57.895 0.00 0.00 41.67 2.85
6151 6889 0.389426 GCGCCTTTCGACACCTCTTA 60.389 55.000 0.00 0.00 41.67 2.10
6152 6890 1.739371 GCGCCTTTCGACACCTCTTAT 60.739 52.381 0.00 0.00 41.67 1.73
6153 6891 2.194271 CGCCTTTCGACACCTCTTATC 58.806 52.381 0.00 0.00 41.67 1.75
6154 6892 2.416836 CGCCTTTCGACACCTCTTATCA 60.417 50.000 0.00 0.00 41.67 2.15
6155 6893 3.738281 CGCCTTTCGACACCTCTTATCAT 60.738 47.826 0.00 0.00 41.67 2.45
6202 6940 4.384547 CACACTTTATGGCCGTTTTTAAGC 59.615 41.667 0.77 0.00 0.00 3.09
6375 7145 2.044555 GCATGCAGCAGAGAAGCCA 61.045 57.895 14.21 0.00 44.79 4.75
6376 7146 1.592400 GCATGCAGCAGAGAAGCCAA 61.592 55.000 14.21 0.00 44.79 4.52
6377 7147 1.103803 CATGCAGCAGAGAAGCCAAT 58.896 50.000 0.00 0.00 34.23 3.16
6378 7148 1.103803 ATGCAGCAGAGAAGCCAATG 58.896 50.000 0.00 0.00 34.23 2.82
6379 7149 0.963856 TGCAGCAGAGAAGCCAATGG 60.964 55.000 0.00 0.00 34.23 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.194640 GCTGGATCTTAATTGAGTCAGCA 58.805 43.478 23.39 7.63 41.30 4.41
68 69 6.291377 TGTTAATGGCTATCTCAAAGCTAGG 58.709 40.000 0.00 0.00 39.97 3.02
264 265 4.557895 GCCTTGGCATGTAAGTAAAAACGT 60.558 41.667 6.79 0.00 0.00 3.99
315 316 1.080501 CTGAGTTCGCGAGCAGGAA 60.081 57.895 24.99 6.26 0.00 3.36
404 405 7.410120 TCTACACATACAGACAATCATCAGT 57.590 36.000 0.00 0.00 0.00 3.41
440 441 3.827302 GGATGATAGCGAGGAAGGTTCTA 59.173 47.826 0.00 0.00 0.00 2.10
451 452 1.609072 CGGAGAAGTGGATGATAGCGA 59.391 52.381 0.00 0.00 0.00 4.93
713 714 1.265905 CAGTTTTTCCCCCGAAACTCG 59.734 52.381 0.00 0.00 42.47 4.18
733 734 7.734942 TGCAATCTGATTTAATTAATTCCCCC 58.265 34.615 3.39 0.00 0.00 5.40
734 735 9.428097 GATGCAATCTGATTTAATTAATTCCCC 57.572 33.333 3.39 0.00 41.17 4.81
763 764 9.588096 GGAATGGGAAATAAAGGAATGTATACT 57.412 33.333 4.17 0.00 0.00 2.12
764 765 9.362151 TGGAATGGGAAATAAAGGAATGTATAC 57.638 33.333 0.00 0.00 0.00 1.47
765 766 9.944079 TTGGAATGGGAAATAAAGGAATGTATA 57.056 29.630 0.00 0.00 0.00 1.47
766 767 8.852671 TTGGAATGGGAAATAAAGGAATGTAT 57.147 30.769 0.00 0.00 0.00 2.29
767 768 8.671987 TTTGGAATGGGAAATAAAGGAATGTA 57.328 30.769 0.00 0.00 0.00 2.29
768 769 7.457535 TCTTTGGAATGGGAAATAAAGGAATGT 59.542 33.333 0.00 0.00 0.00 2.71
769 770 7.850193 TCTTTGGAATGGGAAATAAAGGAATG 58.150 34.615 0.00 0.00 0.00 2.67
770 771 8.628368 ATCTTTGGAATGGGAAATAAAGGAAT 57.372 30.769 0.00 0.00 0.00 3.01
771 772 8.448068 AATCTTTGGAATGGGAAATAAAGGAA 57.552 30.769 0.00 0.00 0.00 3.36
772 773 7.125659 GGAATCTTTGGAATGGGAAATAAAGGA 59.874 37.037 0.00 0.00 0.00 3.36
773 774 7.092935 TGGAATCTTTGGAATGGGAAATAAAGG 60.093 37.037 0.00 0.00 0.00 3.11
774 775 7.765819 GTGGAATCTTTGGAATGGGAAATAAAG 59.234 37.037 0.00 0.00 0.00 1.85
775 776 7.457535 AGTGGAATCTTTGGAATGGGAAATAAA 59.542 33.333 0.00 0.00 0.00 1.40
776 777 6.959366 AGTGGAATCTTTGGAATGGGAAATAA 59.041 34.615 0.00 0.00 0.00 1.40
777 778 6.502138 AGTGGAATCTTTGGAATGGGAAATA 58.498 36.000 0.00 0.00 0.00 1.40
778 779 5.344566 AGTGGAATCTTTGGAATGGGAAAT 58.655 37.500 0.00 0.00 0.00 2.17
779 780 4.750941 AGTGGAATCTTTGGAATGGGAAA 58.249 39.130 0.00 0.00 0.00 3.13
780 781 4.402616 AGTGGAATCTTTGGAATGGGAA 57.597 40.909 0.00 0.00 0.00 3.97
781 782 4.540099 ACTAGTGGAATCTTTGGAATGGGA 59.460 41.667 0.00 0.00 0.00 4.37
782 783 4.860022 ACTAGTGGAATCTTTGGAATGGG 58.140 43.478 0.00 0.00 0.00 4.00
783 784 5.749462 AGACTAGTGGAATCTTTGGAATGG 58.251 41.667 0.00 0.00 0.00 3.16
784 785 8.043710 ACTTAGACTAGTGGAATCTTTGGAATG 58.956 37.037 0.00 0.00 0.00 2.67
785 786 8.152023 ACTTAGACTAGTGGAATCTTTGGAAT 57.848 34.615 0.00 0.00 0.00 3.01
786 787 7.554959 ACTTAGACTAGTGGAATCTTTGGAA 57.445 36.000 0.00 0.00 0.00 3.53
787 788 8.660295 TTACTTAGACTAGTGGAATCTTTGGA 57.340 34.615 0.00 0.00 0.00 3.53
788 789 9.892130 ATTTACTTAGACTAGTGGAATCTTTGG 57.108 33.333 0.00 0.00 0.00 3.28
790 791 9.804758 CGATTTACTTAGACTAGTGGAATCTTT 57.195 33.333 0.00 0.00 33.96 2.52
791 792 8.968969 ACGATTTACTTAGACTAGTGGAATCTT 58.031 33.333 0.00 0.00 33.96 2.40
792 793 8.522542 ACGATTTACTTAGACTAGTGGAATCT 57.477 34.615 0.00 0.00 33.96 2.40
796 797 8.844244 GGAATACGATTTACTTAGACTAGTGGA 58.156 37.037 0.00 0.00 0.00 4.02
797 798 8.848182 AGGAATACGATTTACTTAGACTAGTGG 58.152 37.037 0.00 0.00 0.00 4.00
806 807 9.807649 GGACTTTGTAGGAATACGATTTACTTA 57.192 33.333 0.00 0.00 0.00 2.24
807 808 7.767659 GGGACTTTGTAGGAATACGATTTACTT 59.232 37.037 0.00 0.00 0.00 2.24
808 809 7.270779 GGGACTTTGTAGGAATACGATTTACT 58.729 38.462 0.00 0.00 0.00 2.24
809 810 6.481313 GGGGACTTTGTAGGAATACGATTTAC 59.519 42.308 0.00 0.00 0.00 2.01
810 811 6.384886 AGGGGACTTTGTAGGAATACGATTTA 59.615 38.462 0.00 0.00 37.44 1.40
811 812 5.191124 AGGGGACTTTGTAGGAATACGATTT 59.809 40.000 0.00 0.00 37.44 2.17
812 813 4.720273 AGGGGACTTTGTAGGAATACGATT 59.280 41.667 0.00 0.00 37.44 3.34
813 814 4.296056 AGGGGACTTTGTAGGAATACGAT 58.704 43.478 0.00 0.00 37.44 3.73
814 815 3.716431 AGGGGACTTTGTAGGAATACGA 58.284 45.455 0.00 0.00 37.44 3.43
815 816 5.803237 ATAGGGGACTTTGTAGGAATACG 57.197 43.478 0.00 0.00 43.67 3.06
816 817 6.100714 TGGAATAGGGGACTTTGTAGGAATAC 59.899 42.308 0.00 0.00 43.67 1.89
817 818 6.214278 TGGAATAGGGGACTTTGTAGGAATA 58.786 40.000 0.00 0.00 43.67 1.75
818 819 5.043762 TGGAATAGGGGACTTTGTAGGAAT 58.956 41.667 0.00 0.00 43.67 3.01
819 820 4.440808 TGGAATAGGGGACTTTGTAGGAA 58.559 43.478 0.00 0.00 43.67 3.36
820 821 4.083080 TGGAATAGGGGACTTTGTAGGA 57.917 45.455 0.00 0.00 43.67 2.94
821 822 5.133221 CAATGGAATAGGGGACTTTGTAGG 58.867 45.833 0.00 0.00 43.67 3.18
822 823 5.755849 ACAATGGAATAGGGGACTTTGTAG 58.244 41.667 0.00 0.00 43.67 2.74
823 824 5.789574 ACAATGGAATAGGGGACTTTGTA 57.210 39.130 0.00 0.00 43.67 2.41
824 825 4.675063 ACAATGGAATAGGGGACTTTGT 57.325 40.909 0.00 0.00 43.67 2.83
825 826 6.127451 GGTAAACAATGGAATAGGGGACTTTG 60.127 42.308 0.00 0.00 43.67 2.77
826 827 5.955959 GGTAAACAATGGAATAGGGGACTTT 59.044 40.000 0.00 0.00 43.67 2.66
827 828 5.015817 TGGTAAACAATGGAATAGGGGACTT 59.984 40.000 0.00 0.00 43.67 3.01
829 830 4.862371 TGGTAAACAATGGAATAGGGGAC 58.138 43.478 0.00 0.00 0.00 4.46
830 831 5.399727 GGATGGTAAACAATGGAATAGGGGA 60.400 44.000 0.00 0.00 0.00 4.81
831 832 4.832823 GGATGGTAAACAATGGAATAGGGG 59.167 45.833 0.00 0.00 0.00 4.79
832 833 4.832823 GGGATGGTAAACAATGGAATAGGG 59.167 45.833 0.00 0.00 0.00 3.53
833 834 5.536161 CAGGGATGGTAAACAATGGAATAGG 59.464 44.000 0.00 0.00 0.00 2.57
834 835 5.010012 GCAGGGATGGTAAACAATGGAATAG 59.990 44.000 0.00 0.00 0.00 1.73
835 836 4.892934 GCAGGGATGGTAAACAATGGAATA 59.107 41.667 0.00 0.00 0.00 1.75
836 837 3.706086 GCAGGGATGGTAAACAATGGAAT 59.294 43.478 0.00 0.00 0.00 3.01
837 838 3.096092 GCAGGGATGGTAAACAATGGAA 58.904 45.455 0.00 0.00 0.00 3.53
838 839 2.042297 TGCAGGGATGGTAAACAATGGA 59.958 45.455 0.00 0.00 0.00 3.41
839 840 2.166254 GTGCAGGGATGGTAAACAATGG 59.834 50.000 0.00 0.00 0.00 3.16
840 841 3.091545 AGTGCAGGGATGGTAAACAATG 58.908 45.455 0.00 0.00 0.00 2.82
841 842 3.356290 GAGTGCAGGGATGGTAAACAAT 58.644 45.455 0.00 0.00 0.00 2.71
842 843 2.554344 GGAGTGCAGGGATGGTAAACAA 60.554 50.000 0.00 0.00 0.00 2.83
843 844 1.004277 GGAGTGCAGGGATGGTAAACA 59.996 52.381 0.00 0.00 0.00 2.83
844 845 1.751437 GGAGTGCAGGGATGGTAAAC 58.249 55.000 0.00 0.00 0.00 2.01
845 846 0.251916 CGGAGTGCAGGGATGGTAAA 59.748 55.000 0.00 0.00 0.00 2.01
846 847 0.616395 TCGGAGTGCAGGGATGGTAA 60.616 55.000 0.00 0.00 0.00 2.85
847 848 0.616395 TTCGGAGTGCAGGGATGGTA 60.616 55.000 0.00 0.00 0.00 3.25
848 849 1.918293 TTCGGAGTGCAGGGATGGT 60.918 57.895 0.00 0.00 0.00 3.55
849 850 1.450312 GTTCGGAGTGCAGGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
850 851 1.811266 CGTTCGGAGTGCAGGGATG 60.811 63.158 0.00 0.00 0.00 3.51
851 852 2.579201 CGTTCGGAGTGCAGGGAT 59.421 61.111 0.00 0.00 0.00 3.85
852 853 3.691342 CCGTTCGGAGTGCAGGGA 61.691 66.667 5.19 0.00 0.00 4.20
853 854 4.760047 CCCGTTCGGAGTGCAGGG 62.760 72.222 13.08 0.00 0.00 4.45
858 859 4.760047 CAGGGCCCGTTCGGAGTG 62.760 72.222 18.44 1.82 0.00 3.51
860 861 2.536997 ATTTCAGGGCCCGTTCGGAG 62.537 60.000 18.44 1.53 0.00 4.63
861 862 2.132089 AATTTCAGGGCCCGTTCGGA 62.132 55.000 18.44 7.62 0.00 4.55
862 863 0.393267 TAATTTCAGGGCCCGTTCGG 60.393 55.000 18.44 5.04 0.00 4.30
863 864 1.675552 ATAATTTCAGGGCCCGTTCG 58.324 50.000 18.44 6.68 0.00 3.95
864 865 5.784578 ATAAATAATTTCAGGGCCCGTTC 57.215 39.130 18.44 0.00 0.00 3.95
865 866 6.370453 ACTATAAATAATTTCAGGGCCCGTT 58.630 36.000 18.44 10.19 0.00 4.44
866 867 5.948842 ACTATAAATAATTTCAGGGCCCGT 58.051 37.500 18.44 1.13 0.00 5.28
867 868 6.001460 TGACTATAAATAATTTCAGGGCCCG 58.999 40.000 18.44 12.05 0.00 6.13
868 869 7.890655 AGATGACTATAAATAATTTCAGGGCCC 59.109 37.037 16.46 16.46 0.00 5.80
869 870 8.870075 AGATGACTATAAATAATTTCAGGGCC 57.130 34.615 0.00 0.00 0.00 5.80
870 871 9.507329 TGAGATGACTATAAATAATTTCAGGGC 57.493 33.333 0.00 0.00 0.00 5.19
874 875 9.489084 CCCGTGAGATGACTATAAATAATTTCA 57.511 33.333 0.00 0.00 0.00 2.69
875 876 8.443937 GCCCGTGAGATGACTATAAATAATTTC 58.556 37.037 0.00 0.00 0.00 2.17
876 877 8.157476 AGCCCGTGAGATGACTATAAATAATTT 58.843 33.333 0.00 0.00 0.00 1.82
877 878 7.604164 CAGCCCGTGAGATGACTATAAATAATT 59.396 37.037 0.00 0.00 0.00 1.40
878 879 7.099764 CAGCCCGTGAGATGACTATAAATAAT 58.900 38.462 0.00 0.00 0.00 1.28
879 880 6.455647 CAGCCCGTGAGATGACTATAAATAA 58.544 40.000 0.00 0.00 0.00 1.40
880 881 5.047306 CCAGCCCGTGAGATGACTATAAATA 60.047 44.000 0.00 0.00 0.00 1.40
881 882 4.262635 CCAGCCCGTGAGATGACTATAAAT 60.263 45.833 0.00 0.00 0.00 1.40
882 883 3.069586 CCAGCCCGTGAGATGACTATAAA 59.930 47.826 0.00 0.00 0.00 1.40
883 884 2.628178 CCAGCCCGTGAGATGACTATAA 59.372 50.000 0.00 0.00 0.00 0.98
884 885 2.239400 CCAGCCCGTGAGATGACTATA 58.761 52.381 0.00 0.00 0.00 1.31
885 886 1.043816 CCAGCCCGTGAGATGACTAT 58.956 55.000 0.00 0.00 0.00 2.12
886 887 0.324368 ACCAGCCCGTGAGATGACTA 60.324 55.000 0.00 0.00 0.00 2.59
887 888 1.194781 AACCAGCCCGTGAGATGACT 61.195 55.000 0.00 0.00 0.00 3.41
888 889 0.741221 GAACCAGCCCGTGAGATGAC 60.741 60.000 0.00 0.00 0.00 3.06
889 890 0.904865 AGAACCAGCCCGTGAGATGA 60.905 55.000 0.00 0.00 0.00 2.92
890 891 0.036010 AAGAACCAGCCCGTGAGATG 60.036 55.000 0.00 0.00 0.00 2.90
891 892 0.250513 GAAGAACCAGCCCGTGAGAT 59.749 55.000 0.00 0.00 0.00 2.75
892 893 1.671742 GAAGAACCAGCCCGTGAGA 59.328 57.895 0.00 0.00 0.00 3.27
893 894 1.738099 CGAAGAACCAGCCCGTGAG 60.738 63.158 0.00 0.00 0.00 3.51
894 895 2.342279 CGAAGAACCAGCCCGTGA 59.658 61.111 0.00 0.00 0.00 4.35
895 896 2.742372 CCGAAGAACCAGCCCGTG 60.742 66.667 0.00 0.00 0.00 4.94
896 897 4.699522 GCCGAAGAACCAGCCCGT 62.700 66.667 0.00 0.00 0.00 5.28
927 928 4.410743 GTGGTCCGGTCCGTCGAC 62.411 72.222 13.27 11.09 38.38 4.20
940 941 0.033504 GGATGTCGACTGTGTGTGGT 59.966 55.000 17.92 0.00 0.00 4.16
948 952 2.092323 TGGAGTAGTGGATGTCGACTG 58.908 52.381 17.92 0.00 35.67 3.51
949 953 2.093106 GTGGAGTAGTGGATGTCGACT 58.907 52.381 17.92 1.84 38.48 4.18
950 954 1.816835 TGTGGAGTAGTGGATGTCGAC 59.183 52.381 9.11 9.11 0.00 4.20
951 955 1.816835 GTGTGGAGTAGTGGATGTCGA 59.183 52.381 0.00 0.00 0.00 4.20
952 956 1.135083 GGTGTGGAGTAGTGGATGTCG 60.135 57.143 0.00 0.00 0.00 4.35
953 957 1.207329 GGGTGTGGAGTAGTGGATGTC 59.793 57.143 0.00 0.00 0.00 3.06
954 958 1.276622 GGGTGTGGAGTAGTGGATGT 58.723 55.000 0.00 0.00 0.00 3.06
955 959 0.541863 GGGGTGTGGAGTAGTGGATG 59.458 60.000 0.00 0.00 0.00 3.51
979 983 2.261671 GTCGCCGACTGGATGTGT 59.738 61.111 10.56 0.00 37.49 3.72
1244 1255 1.002251 CGAGATCGGACCTGAAGTAGC 60.002 57.143 0.00 0.00 35.37 3.58
1712 1738 0.918983 CTCCAGTATGCCTTCCCCAA 59.081 55.000 0.00 0.00 31.97 4.12
1917 1954 4.401022 TCAGTTGAATGGTCTTCTGCAAT 58.599 39.130 0.00 0.00 0.00 3.56
1984 2021 7.581814 TGATCAACTTCATCATACCCCATTAA 58.418 34.615 0.00 0.00 0.00 1.40
2366 2415 0.606096 ATTTTGCCAAGGCCCGTAAC 59.394 50.000 8.89 0.00 41.09 2.50
2606 3058 4.735822 CACGTTTTTACATTTTCTCGGCAA 59.264 37.500 0.00 0.00 0.00 4.52
2752 3217 4.500477 GTCGCACAGAAAATGATAAATGGC 59.500 41.667 0.00 0.00 0.00 4.40
3097 3647 7.939039 CCAATGTATAACAGATTACAGACCCAT 59.061 37.037 0.00 0.00 32.24 4.00
3218 3771 5.353400 TGTGTTGTACTCCTATCTGTACTCG 59.647 44.000 0.00 0.00 39.57 4.18
4811 5465 1.087771 CATAGCGACACGGGGGAAAC 61.088 60.000 0.00 0.00 0.00 2.78
4812 5466 1.219664 CATAGCGACACGGGGGAAA 59.780 57.895 0.00 0.00 0.00 3.13
4813 5467 2.727392 CCATAGCGACACGGGGGAA 61.727 63.158 0.00 0.00 0.00 3.97
4814 5468 3.151710 CCATAGCGACACGGGGGA 61.152 66.667 0.00 0.00 0.00 4.81
4815 5469 3.151710 TCCATAGCGACACGGGGG 61.152 66.667 0.00 0.00 0.00 5.40
4816 5470 2.417516 CTCCATAGCGACACGGGG 59.582 66.667 0.00 0.00 0.00 5.73
4817 5471 2.417516 CCTCCATAGCGACACGGG 59.582 66.667 0.00 0.00 0.00 5.28
4818 5472 2.417516 CCCTCCATAGCGACACGG 59.582 66.667 0.00 0.00 0.00 4.94
4819 5473 2.279517 GCCCTCCATAGCGACACG 60.280 66.667 0.00 0.00 0.00 4.49
4826 5480 4.647615 CCGCGTCGCCCTCCATAG 62.648 72.222 12.44 0.00 0.00 2.23
4846 5500 3.145551 TAACCCTCTCGAGCCCGC 61.146 66.667 7.81 0.00 35.37 6.13
4847 5501 1.753463 AGTAACCCTCTCGAGCCCG 60.753 63.158 7.81 0.00 37.07 6.13
4848 5502 0.971447 ACAGTAACCCTCTCGAGCCC 60.971 60.000 7.81 0.00 0.00 5.19
4849 5503 0.896226 AACAGTAACCCTCTCGAGCC 59.104 55.000 7.81 0.00 0.00 4.70
4850 5504 3.863142 TTAACAGTAACCCTCTCGAGC 57.137 47.619 7.81 0.00 0.00 5.03
4851 5505 5.581085 CCAAATTAACAGTAACCCTCTCGAG 59.419 44.000 5.93 5.93 0.00 4.04
4852 5506 5.246656 TCCAAATTAACAGTAACCCTCTCGA 59.753 40.000 0.00 0.00 0.00 4.04
4853 5507 5.484715 TCCAAATTAACAGTAACCCTCTCG 58.515 41.667 0.00 0.00 0.00 4.04
4854 5508 7.393515 ACATTCCAAATTAACAGTAACCCTCTC 59.606 37.037 0.00 0.00 0.00 3.20
4855 5509 7.176690 CACATTCCAAATTAACAGTAACCCTCT 59.823 37.037 0.00 0.00 0.00 3.69
4856 5510 7.175990 TCACATTCCAAATTAACAGTAACCCTC 59.824 37.037 0.00 0.00 0.00 4.30
4857 5511 7.007723 TCACATTCCAAATTAACAGTAACCCT 58.992 34.615 0.00 0.00 0.00 4.34
4858 5512 7.222000 TCACATTCCAAATTAACAGTAACCC 57.778 36.000 0.00 0.00 0.00 4.11
4859 5513 9.139174 CAATCACATTCCAAATTAACAGTAACC 57.861 33.333 0.00 0.00 0.00 2.85
4860 5514 8.647226 GCAATCACATTCCAAATTAACAGTAAC 58.353 33.333 0.00 0.00 0.00 2.50
4861 5515 8.363390 TGCAATCACATTCCAAATTAACAGTAA 58.637 29.630 0.00 0.00 0.00 2.24
4862 5516 7.812191 GTGCAATCACATTCCAAATTAACAGTA 59.188 33.333 0.00 0.00 42.66 2.74
4863 5517 6.646240 GTGCAATCACATTCCAAATTAACAGT 59.354 34.615 0.00 0.00 42.66 3.55
4864 5518 6.091169 GGTGCAATCACATTCCAAATTAACAG 59.909 38.462 0.00 0.00 44.87 3.16
4865 5519 5.931146 GGTGCAATCACATTCCAAATTAACA 59.069 36.000 0.00 0.00 44.87 2.41
4917 5571 3.228188 AGTTGACAGGAATGAGGCAAA 57.772 42.857 0.00 0.00 0.00 3.68
4920 5574 4.590850 AAAAAGTTGACAGGAATGAGGC 57.409 40.909 0.00 0.00 0.00 4.70
4978 5642 4.316025 TGGGGAATCTTGGTAAGGAAAG 57.684 45.455 0.00 0.00 0.00 2.62
4997 5661 0.460722 TGCATTCCAAATCCGCATGG 59.539 50.000 0.00 0.00 38.09 3.66
4998 5662 1.537348 CCTGCATTCCAAATCCGCATG 60.537 52.381 0.00 0.00 31.10 4.06
4999 5663 0.748450 CCTGCATTCCAAATCCGCAT 59.252 50.000 0.00 0.00 31.10 4.73
5000 5664 1.321805 CCCTGCATTCCAAATCCGCA 61.322 55.000 0.00 0.00 0.00 5.69
5002 5666 1.696063 ATCCCTGCATTCCAAATCCG 58.304 50.000 0.00 0.00 0.00 4.18
5051 5715 3.261897 AGGGCGAGAAGAGAATGAAAGAA 59.738 43.478 0.00 0.00 0.00 2.52
5092 5756 2.426522 TCCTTGATCTTCGTGCTTTGG 58.573 47.619 0.00 0.00 0.00 3.28
5101 5765 4.458397 TCTGCATCCATTCCTTGATCTTC 58.542 43.478 0.00 0.00 0.00 2.87
5102 5766 4.515028 TCTGCATCCATTCCTTGATCTT 57.485 40.909 0.00 0.00 0.00 2.40
5145 5809 4.786507 TCACATCAATTCGAGTTTGCTTG 58.213 39.130 5.54 7.79 0.00 4.01
5148 5812 4.726416 ACATCACATCAATTCGAGTTTGC 58.274 39.130 5.54 0.00 0.00 3.68
5163 5827 3.554960 CCGTCTCCTTCTTGAACATCACA 60.555 47.826 0.00 0.00 0.00 3.58
5169 5833 2.296471 TGTCTCCGTCTCCTTCTTGAAC 59.704 50.000 0.00 0.00 0.00 3.18
5384 6048 0.473755 TCAAGCAGTCTGCCTTCCAA 59.526 50.000 21.32 0.00 46.52 3.53
5386 6050 0.676151 CCTCAAGCAGTCTGCCTTCC 60.676 60.000 21.32 0.00 46.52 3.46
5393 6057 3.051940 TCCCATATCCTCAAGCAGTCT 57.948 47.619 0.00 0.00 0.00 3.24
5394 6058 3.135530 ACTTCCCATATCCTCAAGCAGTC 59.864 47.826 0.00 0.00 0.00 3.51
5435 6099 5.683681 AGCCAAAATCTGTTTGTCCAAAAT 58.316 33.333 0.00 0.00 31.33 1.82
5436 6100 5.096443 AGCCAAAATCTGTTTGTCCAAAA 57.904 34.783 0.00 0.00 31.33 2.44
5448 6112 6.489361 GGATCATCAGTTCATAGCCAAAATCT 59.511 38.462 0.00 0.00 0.00 2.40
5450 6114 6.131264 TGGATCATCAGTTCATAGCCAAAAT 58.869 36.000 0.00 0.00 0.00 1.82
5453 6117 4.776435 TGGATCATCAGTTCATAGCCAA 57.224 40.909 0.00 0.00 0.00 4.52
5456 6120 4.325119 AGCATGGATCATCAGTTCATAGC 58.675 43.478 0.00 0.00 0.00 2.97
5510 6180 4.940046 CCTCAGTACACTTTCATGAAGCAT 59.060 41.667 8.41 0.00 39.04 3.79
5522 6192 2.224548 GGTCAAAAGGCCTCAGTACACT 60.225 50.000 5.23 0.00 0.00 3.55
5529 6199 0.555769 ACAAGGGTCAAAAGGCCTCA 59.444 50.000 5.23 0.00 0.00 3.86
5533 6203 1.613925 GAGGAACAAGGGTCAAAAGGC 59.386 52.381 0.00 0.00 0.00 4.35
5554 6224 1.129437 GAAACGAGCTGGCATCTTCAC 59.871 52.381 0.00 0.00 0.00 3.18
5564 6234 7.914537 AAAAGAAAATAACAGAAACGAGCTG 57.085 32.000 0.00 0.00 39.26 4.24
5679 6399 6.710597 TGTCATCTACGGAATACTTAGCTT 57.289 37.500 0.00 0.00 0.00 3.74
5726 6446 9.804758 ATGATGCAAAACAATCAAACAAAATTT 57.195 22.222 0.00 0.00 0.00 1.82
5760 6482 7.533289 TTCTAAAATCAAAAGTAAGGGGGTG 57.467 36.000 0.00 0.00 0.00 4.61
5761 6483 7.256190 GCTTTCTAAAATCAAAAGTAAGGGGGT 60.256 37.037 0.00 0.00 33.53 4.95
5800 6524 7.581213 TTGAAGATTTTCATGTGTAGTTGGT 57.419 32.000 0.00 0.00 42.60 3.67
5833 6559 1.068125 GTAAACCGTCATTGGGTTGGC 60.068 52.381 0.00 0.00 46.75 4.52
5902 6630 1.134189 TGTCTCCGGATCTTCGCTCTA 60.134 52.381 3.57 0.00 0.00 2.43
5917 6645 3.118847 TGACAATCATGGAGCTCTGTCTC 60.119 47.826 23.86 6.54 35.36 3.36
5973 6705 2.767505 CTTGGGGTGTACTCTTCACAC 58.232 52.381 0.00 0.00 44.48 3.82
6012 6744 1.818674 GGTTGATTGGTTAGTGGGCAG 59.181 52.381 0.00 0.00 0.00 4.85
6033 6765 6.985653 TTCAAGGGTGTGATTATTGGAAAA 57.014 33.333 0.00 0.00 0.00 2.29
6090 6826 1.770294 AAGAGAAGGCGGAGTAGAGG 58.230 55.000 0.00 0.00 0.00 3.69
6092 6828 2.803956 TGAAAGAGAAGGCGGAGTAGA 58.196 47.619 0.00 0.00 0.00 2.59
6110 6846 0.673333 ATGACTCCGCGCAATGTTGA 60.673 50.000 8.75 0.00 0.00 3.18
6150 6888 8.621532 AAACAACTTGACTTTCTAGCATGATA 57.378 30.769 0.00 0.00 0.00 2.15
6151 6889 7.516198 AAACAACTTGACTTTCTAGCATGAT 57.484 32.000 0.00 0.00 0.00 2.45
6152 6890 6.942532 AAACAACTTGACTTTCTAGCATGA 57.057 33.333 0.00 0.00 0.00 3.07
6153 6891 6.798959 GCTAAACAACTTGACTTTCTAGCATG 59.201 38.462 0.00 0.00 0.00 4.06
6154 6892 6.072452 GGCTAAACAACTTGACTTTCTAGCAT 60.072 38.462 0.00 0.00 0.00 3.79
6155 6893 5.238650 GGCTAAACAACTTGACTTTCTAGCA 59.761 40.000 0.00 0.00 0.00 3.49
6202 6940 2.113774 TGAGCAGGCAACCACCAG 59.886 61.111 0.00 0.00 37.17 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.