Multiple sequence alignment - TraesCS2D01G187200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G187200 chr2D 100.000 2732 0 0 1 2732 131190287 131193018 0.000000e+00 5046.0
1 TraesCS2D01G187200 chr2D 78.906 640 77 29 1285 1873 131271389 131272021 5.520000e-102 381.0
2 TraesCS2D01G187200 chr2D 77.881 538 77 21 974 1479 131271008 131271535 2.060000e-76 296.0
3 TraesCS2D01G187200 chr2D 93.714 175 8 3 14 186 446324633 446324806 2.700000e-65 259.0
4 TraesCS2D01G187200 chr2D 97.987 149 2 1 14 161 446324685 446324833 9.710000e-65 257.0
5 TraesCS2D01G187200 chr2D 95.302 149 6 1 17 164 110662939 110662791 4.550000e-58 235.0
6 TraesCS2D01G187200 chr2D 100.000 44 0 0 1613 1656 131191863 131191906 6.270000e-12 82.4
7 TraesCS2D01G187200 chr2D 100.000 44 0 0 1577 1620 131191899 131191942 6.270000e-12 82.4
8 TraesCS2D01G187200 chr2A 91.519 1073 56 13 783 1822 137277787 137278857 0.000000e+00 1445.0
9 TraesCS2D01G187200 chr2A 94.156 154 8 1 630 783 137277600 137277752 1.640000e-57 233.0
10 TraesCS2D01G187200 chr2A 92.708 96 6 1 1613 1708 137278606 137278700 1.320000e-28 137.0
11 TraesCS2D01G187200 chr2A 100.000 30 0 0 1888 1917 465366922 465366951 3.800000e-04 56.5
12 TraesCS2D01G187200 chr2B 90.481 1040 61 6 782 1810 184666914 184667926 0.000000e+00 1338.0
13 TraesCS2D01G187200 chr2B 78.056 998 121 42 974 1889 184770854 184771835 8.610000e-150 540.0
14 TraesCS2D01G187200 chr2B 93.506 154 9 1 630 783 184666728 184666880 7.610000e-56 228.0
15 TraesCS2D01G187200 chr2B 94.406 143 8 0 2315 2457 184668275 184668417 1.270000e-53 220.0
16 TraesCS2D01G187200 chr2B 90.722 97 9 0 1613 1709 184667687 184667783 2.210000e-26 130.0
17 TraesCS2D01G187200 chr4D 96.825 630 18 2 1 629 483632663 483632035 0.000000e+00 1051.0
18 TraesCS2D01G187200 chr4D 94.118 51 3 0 579 629 440265079 440265129 8.110000e-11 78.7
19 TraesCS2D01G187200 chr7D 94.778 632 12 3 1 630 10879049 10878437 0.000000e+00 965.0
20 TraesCS2D01G187200 chr7D 90.084 595 15 10 40 628 148137301 148137857 0.000000e+00 732.0
21 TraesCS2D01G187200 chr7D 87.234 188 12 10 1 186 148137317 148137494 1.280000e-48 204.0
22 TraesCS2D01G187200 chr7D 80.412 97 9 1 1887 1983 565471768 565471682 6.310000e-07 65.8
23 TraesCS2D01G187200 chr1D 92.773 595 19 6 40 629 309574392 309574967 0.000000e+00 839.0
24 TraesCS2D01G187200 chr1D 91.626 406 23 2 146 540 466352117 466351712 3.980000e-153 551.0
25 TraesCS2D01G187200 chr1D 87.234 188 12 10 1 186 309574408 309574585 1.280000e-48 204.0
26 TraesCS2D01G187200 chr1D 90.722 97 9 0 536 632 466347364 466347268 2.210000e-26 130.0
27 TraesCS2D01G187200 chr1D 89.691 97 9 1 194 290 466352142 466352047 3.690000e-24 122.0
28 TraesCS2D01G187200 chr1D 83.333 84 11 3 217 300 309574500 309574580 1.050000e-09 75.0
29 TraesCS2D01G187200 chr1D 92.157 51 4 0 579 629 389557481 389557531 3.770000e-09 73.1
30 TraesCS2D01G187200 chr1A 76.628 261 54 5 2295 2552 495189391 495189647 1.320000e-28 137.0
31 TraesCS2D01G187200 chr1A 86.458 96 11 2 192 287 561200972 561201065 1.340000e-18 104.0
32 TraesCS2D01G187200 chr1B 86.000 100 12 2 192 291 646925455 646925552 3.720000e-19 106.0
33 TraesCS2D01G187200 chr1B 97.143 35 1 0 1883 1917 382213253 382213219 2.940000e-05 60.2
34 TraesCS2D01G187200 chr5D 82.569 109 8 2 1875 1982 211211325 211211423 4.850000e-13 86.1
35 TraesCS2D01G187200 chr5D 94.231 52 3 0 579 630 310265141 310265192 2.260000e-11 80.5
36 TraesCS2D01G187200 chr7A 89.552 67 6 1 1917 1983 641016154 641016089 1.740000e-12 84.2
37 TraesCS2D01G187200 chr7A 82.828 99 7 1 1881 1979 612025781 612025869 2.260000e-11 80.5
38 TraesCS2D01G187200 chr7B 82.105 95 13 2 1888 1982 119207689 119207599 8.110000e-11 78.7
39 TraesCS2D01G187200 chr7B 79.048 105 9 6 1883 1984 236595979 236596073 2.940000e-05 60.2
40 TraesCS2D01G187200 chr7B 100.000 30 0 0 1888 1917 744092260 744092289 3.800000e-04 56.5
41 TraesCS2D01G187200 chr6A 97.368 38 1 0 1880 1917 187298677 187298640 6.310000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G187200 chr2D 131190287 131193018 2731 False 1736.933333 5046 100.000000 1 2732 3 chr2D.!!$F1 2731
1 TraesCS2D01G187200 chr2D 131271008 131272021 1013 False 338.500000 381 78.393500 974 1873 2 chr2D.!!$F2 899
2 TraesCS2D01G187200 chr2A 137277600 137278857 1257 False 605.000000 1445 92.794333 630 1822 3 chr2A.!!$F2 1192
3 TraesCS2D01G187200 chr2B 184770854 184771835 981 False 540.000000 540 78.056000 974 1889 1 chr2B.!!$F1 915
4 TraesCS2D01G187200 chr2B 184666728 184668417 1689 False 479.000000 1338 92.278750 630 2457 4 chr2B.!!$F2 1827
5 TraesCS2D01G187200 chr4D 483632035 483632663 628 True 1051.000000 1051 96.825000 1 629 1 chr4D.!!$R1 628
6 TraesCS2D01G187200 chr7D 10878437 10879049 612 True 965.000000 965 94.778000 1 630 1 chr7D.!!$R1 629
7 TraesCS2D01G187200 chr7D 148137301 148137857 556 False 468.000000 732 88.659000 1 628 2 chr7D.!!$F1 627
8 TraesCS2D01G187200 chr1D 309574392 309574967 575 False 372.666667 839 87.780000 1 629 3 chr1D.!!$F2 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 418 1.063867 AGTCGGGTGCTACTATGGAGT 60.064 52.381 0.0 0.0 39.92 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 2546 0.037447 GCCCAGAGCTTTTCTCCTGT 59.963 55.0 0.0 0.0 42.9 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
287 306 1.246056 GCTGCAATGGAGCTTCACCA 61.246 55.000 19.55 0.00 41.83 4.17
345 364 3.117171 CTCTCGGTGCTGCAGTGC 61.117 66.667 16.64 8.58 0.00 4.40
383 418 1.063867 AGTCGGGTGCTACTATGGAGT 60.064 52.381 0.00 0.00 39.92 3.85
460 495 2.577911 GATGCGGCGCTGCTTTTC 60.578 61.111 38.42 27.53 35.36 2.29
638 673 2.106332 CAGCGGCCTAAGTACCCG 59.894 66.667 0.00 3.43 44.58 5.28
792 862 2.682893 GCAGTAGTGCCCGATTCTG 58.317 57.895 11.74 0.00 44.72 3.02
798 868 2.031919 TGCCCGATTCTGCAACGT 59.968 55.556 0.00 0.00 33.87 3.99
801 873 1.369091 GCCCGATTCTGCAACGTCAT 61.369 55.000 0.00 0.00 0.00 3.06
829 902 2.964123 CGAGTACGAAAACGTAACACGA 59.036 45.455 5.61 0.00 42.58 4.35
858 934 2.174349 GGAAGAAACGCAGCGCAG 59.826 61.111 16.61 1.31 0.00 5.18
930 1010 1.982395 CCGATGAGCGCCCCCTATA 60.982 63.158 2.29 0.00 39.11 1.31
936 1016 1.493022 TGAGCGCCCCCTATAAAATGT 59.507 47.619 2.29 0.00 0.00 2.71
951 1031 2.579410 AATGTTGTACCCTCGCCTTT 57.421 45.000 0.00 0.00 0.00 3.11
987 1067 1.268899 ACACCGTTCTTGACTAGTCCG 59.731 52.381 20.11 14.72 0.00 4.79
1032 1116 2.191641 GCCAGCATGTCCTCCTCC 59.808 66.667 0.00 0.00 0.00 4.30
1037 1121 0.548682 AGCATGTCCTCCTCCCTTGT 60.549 55.000 0.00 0.00 0.00 3.16
1050 1134 2.348998 CTTGTGGCGCTCCTCCTT 59.651 61.111 7.64 0.00 0.00 3.36
1366 1528 0.944386 CAAACCTGACGTGGAACCAG 59.056 55.000 0.00 0.00 0.00 4.00
1375 1537 3.241530 TGGAACCAGCGCCAGAGT 61.242 61.111 2.29 0.00 0.00 3.24
1384 1546 2.360350 CGCCAGAGTTGCCACCAT 60.360 61.111 0.00 0.00 0.00 3.55
1627 1801 4.020617 CGGAGCTGCCACCCAAGA 62.021 66.667 0.00 0.00 35.94 3.02
1629 1803 2.431683 GAGCTGCCACCCAAGACA 59.568 61.111 0.00 0.00 0.00 3.41
1633 1837 1.002868 CTGCCACCCAAGACAGAGG 60.003 63.158 0.00 0.00 31.67 3.69
1634 1838 1.461268 TGCCACCCAAGACAGAGGA 60.461 57.895 0.00 0.00 0.00 3.71
1805 2015 0.661552 GTCCATGACGAGCTAGCGTA 59.338 55.000 9.55 0.00 45.72 4.42
1822 2032 3.047807 TAGCCTGCCTGCCATCCAC 62.048 63.158 0.00 0.00 0.00 4.02
1838 2054 4.201685 CCATCCACGATTTGTTTCTACGTC 60.202 45.833 0.00 0.00 35.05 4.34
1854 2070 1.208535 ACGTCCCTGTTGAGTTGTTGA 59.791 47.619 0.00 0.00 0.00 3.18
1857 2073 3.541632 GTCCCTGTTGAGTTGTTGAGAA 58.458 45.455 0.00 0.00 0.00 2.87
1873 2089 7.525688 TGTTGAGAATGTTTGAGATCGTATC 57.474 36.000 0.00 0.00 0.00 2.24
1901 2117 9.884814 ATACATATATAATACTCCCTCAGTCCC 57.115 37.037 0.00 0.00 36.43 4.46
1902 2118 7.719424 ACATATATAATACTCCCTCAGTCCCA 58.281 38.462 0.00 0.00 36.43 4.37
1903 2119 8.355256 ACATATATAATACTCCCTCAGTCCCAT 58.645 37.037 0.00 0.00 36.43 4.00
1904 2120 9.883293 CATATATAATACTCCCTCAGTCCCATA 57.117 37.037 0.00 0.00 36.43 2.74
1907 2123 5.832539 AATACTCCCTCAGTCCCATAATG 57.167 43.478 0.00 0.00 36.43 1.90
1908 2124 3.136641 ACTCCCTCAGTCCCATAATGT 57.863 47.619 0.00 0.00 0.00 2.71
1909 2125 4.280789 ACTCCCTCAGTCCCATAATGTA 57.719 45.455 0.00 0.00 0.00 2.29
1910 2126 4.631234 ACTCCCTCAGTCCCATAATGTAA 58.369 43.478 0.00 0.00 0.00 2.41
1911 2127 4.656112 ACTCCCTCAGTCCCATAATGTAAG 59.344 45.833 0.00 0.00 0.00 2.34
1912 2128 4.890988 TCCCTCAGTCCCATAATGTAAGA 58.109 43.478 0.00 0.00 0.00 2.10
1913 2129 4.654262 TCCCTCAGTCCCATAATGTAAGAC 59.346 45.833 0.00 0.00 0.00 3.01
1914 2130 4.501571 CCCTCAGTCCCATAATGTAAGACG 60.502 50.000 0.00 0.00 32.70 4.18
1915 2131 4.099573 CCTCAGTCCCATAATGTAAGACGT 59.900 45.833 0.00 0.00 32.70 4.34
1916 2132 5.395324 CCTCAGTCCCATAATGTAAGACGTT 60.395 44.000 0.00 0.00 32.70 3.99
1917 2133 5.416083 TCAGTCCCATAATGTAAGACGTTG 58.584 41.667 0.00 0.00 32.70 4.10
1918 2134 5.046878 TCAGTCCCATAATGTAAGACGTTGT 60.047 40.000 0.00 0.00 32.70 3.32
1919 2135 6.153170 TCAGTCCCATAATGTAAGACGTTGTA 59.847 38.462 0.00 0.00 32.70 2.41
1920 2136 6.814644 CAGTCCCATAATGTAAGACGTTGTAA 59.185 38.462 0.00 0.00 32.70 2.41
1921 2137 7.332430 CAGTCCCATAATGTAAGACGTTGTAAA 59.668 37.037 0.00 0.00 32.70 2.01
1922 2138 7.879160 AGTCCCATAATGTAAGACGTTGTAAAA 59.121 33.333 0.00 0.00 32.70 1.52
1923 2139 7.959109 GTCCCATAATGTAAGACGTTGTAAAAC 59.041 37.037 0.00 0.00 0.00 2.43
1974 2190 5.598416 AATGTCTGACATTATGAGACGGA 57.402 39.130 29.22 0.00 46.11 4.69
1975 2191 4.639135 TGTCTGACATTATGAGACGGAG 57.361 45.455 6.36 0.00 39.23 4.63
1976 2192 3.381590 TGTCTGACATTATGAGACGGAGG 59.618 47.826 6.36 0.00 39.23 4.30
1977 2193 2.959030 TCTGACATTATGAGACGGAGGG 59.041 50.000 0.00 0.00 0.00 4.30
1978 2194 2.959030 CTGACATTATGAGACGGAGGGA 59.041 50.000 0.00 0.00 0.00 4.20
1979 2195 2.959030 TGACATTATGAGACGGAGGGAG 59.041 50.000 0.00 0.00 0.00 4.30
1980 2196 2.959707 GACATTATGAGACGGAGGGAGT 59.040 50.000 0.00 0.00 0.00 3.85
1981 2197 4.142790 GACATTATGAGACGGAGGGAGTA 58.857 47.826 0.00 0.00 0.00 2.59
1991 2207 7.520798 TGAGACGGAGGGAGTATACTAATTAA 58.479 38.462 5.09 0.00 0.00 1.40
1993 2209 8.175925 AGACGGAGGGAGTATACTAATTAAAC 57.824 38.462 5.09 0.00 0.00 2.01
1994 2210 7.232330 AGACGGAGGGAGTATACTAATTAAACC 59.768 40.741 5.09 0.55 0.00 3.27
1995 2211 6.015940 ACGGAGGGAGTATACTAATTAAACCG 60.016 42.308 20.13 20.13 39.13 4.44
1996 2212 6.015940 CGGAGGGAGTATACTAATTAAACCGT 60.016 42.308 5.09 2.48 0.00 4.83
1997 2213 7.374272 GGAGGGAGTATACTAATTAAACCGTC 58.626 42.308 5.09 11.18 0.00 4.79
1998 2214 7.014615 GGAGGGAGTATACTAATTAAACCGTCA 59.985 40.741 20.14 0.00 33.39 4.35
1999 2215 8.488308 AGGGAGTATACTAATTAAACCGTCAT 57.512 34.615 5.09 0.00 0.00 3.06
2000 2216 8.583296 AGGGAGTATACTAATTAAACCGTCATC 58.417 37.037 5.09 0.00 0.00 2.92
2001 2217 8.362639 GGGAGTATACTAATTAAACCGTCATCA 58.637 37.037 5.09 0.00 0.00 3.07
2002 2218 9.189723 GGAGTATACTAATTAAACCGTCATCAC 57.810 37.037 5.09 0.00 0.00 3.06
2003 2219 8.792831 AGTATACTAATTAAACCGTCATCACG 57.207 34.615 2.75 0.00 46.29 4.35
2004 2220 8.408601 AGTATACTAATTAAACCGTCATCACGT 58.591 33.333 2.75 0.00 45.17 4.49
2019 2241 5.034797 TCATCACGTGTAAGATCGATTCAC 58.965 41.667 16.51 6.63 0.00 3.18
2027 2249 3.543680 AAGATCGATTCACCGGATGTT 57.456 42.857 9.46 0.00 0.00 2.71
2029 2251 4.665833 AGATCGATTCACCGGATGTTTA 57.334 40.909 9.46 0.00 0.00 2.01
2041 2263 3.687698 CCGGATGTTTATTTCAAGTCGGT 59.312 43.478 0.00 0.00 0.00 4.69
2042 2264 4.201783 CCGGATGTTTATTTCAAGTCGGTC 60.202 45.833 0.00 0.00 0.00 4.79
2043 2265 4.630069 CGGATGTTTATTTCAAGTCGGTCT 59.370 41.667 0.00 0.00 0.00 3.85
2044 2266 5.121768 CGGATGTTTATTTCAAGTCGGTCTT 59.878 40.000 0.00 0.00 36.75 3.01
2048 2270 9.887406 GATGTTTATTTCAAGTCGGTCTTAAAA 57.113 29.630 0.00 0.00 34.66 1.52
2053 2275 9.887406 TTATTTCAAGTCGGTCTTAAAATTGTC 57.113 29.630 2.25 0.00 36.01 3.18
2054 2276 6.928979 TTCAAGTCGGTCTTAAAATTGTCA 57.071 33.333 0.00 0.00 34.66 3.58
2055 2277 6.928979 TCAAGTCGGTCTTAAAATTGTCAA 57.071 33.333 0.00 0.00 34.66 3.18
2056 2278 6.954944 TCAAGTCGGTCTTAAAATTGTCAAG 58.045 36.000 0.00 0.00 34.66 3.02
2077 2299 7.272731 GTCAAGTTAATTATTGGAAAACCGAGC 59.727 37.037 0.21 0.00 0.00 5.03
2084 2306 1.670791 TGGAAAACCGAGCGAAAACT 58.329 45.000 0.00 0.00 0.00 2.66
2085 2307 2.836262 TGGAAAACCGAGCGAAAACTA 58.164 42.857 0.00 0.00 0.00 2.24
2094 2316 3.804325 CCGAGCGAAAACTATCACATCAT 59.196 43.478 0.00 0.00 0.00 2.45
2098 2320 4.576463 AGCGAAAACTATCACATCATTCCC 59.424 41.667 0.00 0.00 0.00 3.97
2100 2322 4.024893 CGAAAACTATCACATCATTCCCGG 60.025 45.833 0.00 0.00 0.00 5.73
2107 2334 3.491342 TCACATCATTCCCGGAAAAACA 58.509 40.909 0.73 0.00 0.00 2.83
2117 2344 1.342819 CCGGAAAAACAGGGCAATCAA 59.657 47.619 0.00 0.00 0.00 2.57
2119 2346 2.295909 CGGAAAAACAGGGCAATCAAGA 59.704 45.455 0.00 0.00 0.00 3.02
2123 2350 1.523758 AACAGGGCAATCAAGACGAC 58.476 50.000 0.00 0.00 0.00 4.34
2126 2353 0.250513 AGGGCAATCAAGACGACCTC 59.749 55.000 0.00 0.00 0.00 3.85
2131 2358 0.456312 AATCAAGACGACCTCGCGAC 60.456 55.000 3.71 0.00 44.43 5.19
2138 2365 2.264794 GACCTCGCGACCCACAAT 59.735 61.111 3.71 0.00 0.00 2.71
2139 2366 2.047274 ACCTCGCGACCCACAATG 60.047 61.111 3.71 0.00 0.00 2.82
2143 2370 4.444024 CGCGACCCACAATGCACG 62.444 66.667 0.00 0.00 0.00 5.34
2163 2390 1.666553 ACGCCGTCGAGATTGCAAA 60.667 52.632 1.71 0.00 39.41 3.68
2165 2392 1.225745 GCCGTCGAGATTGCAAACG 60.226 57.895 12.50 12.50 0.00 3.60
2174 2401 1.812571 AGATTGCAAACGGGTGTCATC 59.187 47.619 1.71 0.00 0.00 2.92
2178 2405 1.225376 GCAAACGGGTGTCATCGTCA 61.225 55.000 4.97 0.00 38.78 4.35
2187 2414 2.268298 GTGTCATCGTCATACACCACC 58.732 52.381 0.00 0.00 38.02 4.61
2205 2432 2.544726 CGCAAGGGAAACTCAGACC 58.455 57.895 0.00 0.00 0.00 3.85
2208 2435 0.771127 CAAGGGAAACTCAGACCCCA 59.229 55.000 0.00 0.00 44.21 4.96
2209 2436 1.355720 CAAGGGAAACTCAGACCCCAT 59.644 52.381 0.00 0.00 44.21 4.00
2212 2439 1.566231 GGGAAACTCAGACCCCATCAT 59.434 52.381 0.00 0.00 38.69 2.45
2235 2462 2.304092 ACGACCATCGATGTAGCCTTA 58.696 47.619 23.27 0.00 43.74 2.69
2236 2463 2.891580 ACGACCATCGATGTAGCCTTAT 59.108 45.455 23.27 0.00 43.74 1.73
2240 2467 3.006967 ACCATCGATGTAGCCTTATCCAC 59.993 47.826 23.27 0.00 0.00 4.02
2245 2472 3.245284 CGATGTAGCCTTATCCACAAACG 59.755 47.826 0.00 0.00 0.00 3.60
2247 2474 3.592059 TGTAGCCTTATCCACAAACGAC 58.408 45.455 0.00 0.00 0.00 4.34
2248 2475 1.722011 AGCCTTATCCACAAACGACG 58.278 50.000 0.00 0.00 0.00 5.12
2249 2476 1.001633 AGCCTTATCCACAAACGACGT 59.998 47.619 0.00 0.00 0.00 4.34
2250 2477 1.127951 GCCTTATCCACAAACGACGTG 59.872 52.381 0.00 0.00 0.00 4.49
2251 2478 1.127951 CCTTATCCACAAACGACGTGC 59.872 52.381 0.00 0.00 32.85 5.34
2252 2479 1.795872 CTTATCCACAAACGACGTGCA 59.204 47.619 0.00 0.00 32.85 4.57
2253 2480 1.141645 TATCCACAAACGACGTGCAC 58.858 50.000 6.82 6.82 32.85 4.57
2254 2481 1.827315 ATCCACAAACGACGTGCACG 61.827 55.000 35.99 35.99 46.33 5.34
2255 2482 2.518312 CCACAAACGACGTGCACGA 61.518 57.895 42.94 0.00 43.02 4.35
2256 2483 1.562691 CACAAACGACGTGCACGAT 59.437 52.632 42.94 27.40 43.02 3.73
2257 2484 0.717896 CACAAACGACGTGCACGATG 60.718 55.000 42.94 33.18 43.02 3.84
2268 2495 2.584064 CACGATGTGCCTAGGCCA 59.416 61.111 30.81 25.97 41.09 5.36
2271 2498 2.203266 GATGTGCCTAGGCCAGCC 60.203 66.667 30.81 18.00 41.09 4.85
2272 2499 3.016971 ATGTGCCTAGGCCAGCCA 61.017 61.111 30.81 20.75 41.09 4.75
2275 2502 2.123428 GTGCCTAGGCCAGCCAATG 61.123 63.158 30.81 0.00 41.09 2.82
2276 2503 3.222121 GCCTAGGCCAGCCAATGC 61.222 66.667 24.19 6.02 38.92 3.56
2282 2509 2.742403 GCCAGCCAATGCCAAACA 59.258 55.556 0.00 0.00 38.69 2.83
2283 2510 1.375013 GCCAGCCAATGCCAAACAG 60.375 57.895 0.00 0.00 38.69 3.16
2284 2511 1.375013 CCAGCCAATGCCAAACAGC 60.375 57.895 0.00 0.00 38.69 4.40
2285 2512 1.375013 CAGCCAATGCCAAACAGCC 60.375 57.895 0.00 0.00 38.69 4.85
2286 2513 1.837947 AGCCAATGCCAAACAGCCA 60.838 52.632 0.00 0.00 38.69 4.75
2287 2514 1.375013 GCCAATGCCAAACAGCCAG 60.375 57.895 0.00 0.00 0.00 4.85
2288 2515 1.375013 CCAATGCCAAACAGCCAGC 60.375 57.895 0.00 0.00 0.00 4.85
2289 2516 1.375013 CAATGCCAAACAGCCAGCC 60.375 57.895 0.00 0.00 0.00 4.85
2290 2517 2.934570 AATGCCAAACAGCCAGCCG 61.935 57.895 0.00 0.00 0.00 5.52
2308 2535 2.202544 CGCAGCTCCGACTCTGTC 60.203 66.667 0.00 0.00 33.09 3.51
2318 2545 3.228085 GACTCTGTCGACGAGCATC 57.772 57.895 26.39 18.05 31.71 3.91
2319 2546 0.448197 GACTCTGTCGACGAGCATCA 59.552 55.000 26.39 3.86 33.17 3.07
2355 2582 3.044059 GCTTGCACCGATCCAGCAC 62.044 63.158 0.00 0.00 38.11 4.40
2402 2629 1.695114 TATCACCGCATGGGACCCTG 61.695 60.000 13.00 8.76 40.75 4.45
2420 2647 0.671472 TGCACAGCAGATCCGACTTG 60.671 55.000 0.00 0.00 33.32 3.16
2426 2653 1.480137 AGCAGATCCGACTTGAGGAAG 59.520 52.381 0.00 0.00 41.69 3.46
2441 2668 0.875059 GGAAGACAAAGTGAAGCCCG 59.125 55.000 0.00 0.00 0.00 6.13
2461 2688 4.329545 GACCCCTTGAGCACGCCA 62.330 66.667 0.00 0.00 0.00 5.69
2462 2689 3.628646 GACCCCTTGAGCACGCCAT 62.629 63.158 0.00 0.00 0.00 4.40
2463 2690 2.252072 GACCCCTTGAGCACGCCATA 62.252 60.000 0.00 0.00 0.00 2.74
2464 2691 1.149174 CCCCTTGAGCACGCCATAT 59.851 57.895 0.00 0.00 0.00 1.78
2465 2692 1.168407 CCCCTTGAGCACGCCATATG 61.168 60.000 0.00 0.00 0.00 1.78
2466 2693 0.179048 CCCTTGAGCACGCCATATGA 60.179 55.000 3.65 0.00 0.00 2.15
2467 2694 1.667236 CCTTGAGCACGCCATATGAA 58.333 50.000 3.65 0.00 0.00 2.57
2468 2695 1.600957 CCTTGAGCACGCCATATGAAG 59.399 52.381 3.65 0.00 0.00 3.02
2469 2696 1.003116 CTTGAGCACGCCATATGAAGC 60.003 52.381 3.65 0.00 0.00 3.86
2470 2697 0.815213 TGAGCACGCCATATGAAGCC 60.815 55.000 3.65 0.00 0.00 4.35
2471 2698 1.835483 GAGCACGCCATATGAAGCCG 61.835 60.000 3.65 4.09 0.00 5.52
2472 2699 2.896801 GCACGCCATATGAAGCCGG 61.897 63.158 3.65 0.00 0.00 6.13
2473 2700 2.591715 ACGCCATATGAAGCCGGC 60.592 61.111 21.89 21.89 41.30 6.13
2474 2701 2.281070 CGCCATATGAAGCCGGCT 60.281 61.111 27.08 27.08 42.59 5.52
2475 2702 1.005037 CGCCATATGAAGCCGGCTA 60.005 57.895 33.07 16.93 42.59 3.93
2476 2703 1.291877 CGCCATATGAAGCCGGCTAC 61.292 60.000 33.07 10.70 42.59 3.58
2477 2704 0.955919 GCCATATGAAGCCGGCTACC 60.956 60.000 33.07 24.57 41.50 3.18
2478 2705 0.396435 CCATATGAAGCCGGCTACCA 59.604 55.000 33.07 29.36 0.00 3.25
2479 2706 1.202758 CCATATGAAGCCGGCTACCAA 60.203 52.381 33.07 16.78 0.00 3.67
2480 2707 2.571212 CATATGAAGCCGGCTACCAAA 58.429 47.619 33.07 15.19 0.00 3.28
2481 2708 2.791347 TATGAAGCCGGCTACCAAAA 57.209 45.000 33.07 19.01 0.00 2.44
2482 2709 1.173913 ATGAAGCCGGCTACCAAAAC 58.826 50.000 33.07 15.00 0.00 2.43
2483 2710 0.179015 TGAAGCCGGCTACCAAAACA 60.179 50.000 33.07 17.33 0.00 2.83
2484 2711 0.240145 GAAGCCGGCTACCAAAACAC 59.760 55.000 33.07 8.87 0.00 3.32
2485 2712 0.466555 AAGCCGGCTACCAAAACACA 60.467 50.000 33.07 0.00 0.00 3.72
2486 2713 0.466555 AGCCGGCTACCAAAACACAA 60.467 50.000 31.86 0.00 0.00 3.33
2487 2714 0.318360 GCCGGCTACCAAAACACAAC 60.318 55.000 22.15 0.00 0.00 3.32
2488 2715 1.314730 CCGGCTACCAAAACACAACT 58.685 50.000 0.00 0.00 0.00 3.16
2489 2716 2.496111 CCGGCTACCAAAACACAACTA 58.504 47.619 0.00 0.00 0.00 2.24
2490 2717 2.224784 CCGGCTACCAAAACACAACTAC 59.775 50.000 0.00 0.00 0.00 2.73
2491 2718 2.873472 CGGCTACCAAAACACAACTACA 59.127 45.455 0.00 0.00 0.00 2.74
2492 2719 3.312973 CGGCTACCAAAACACAACTACAA 59.687 43.478 0.00 0.00 0.00 2.41
2493 2720 4.201930 CGGCTACCAAAACACAACTACAAA 60.202 41.667 0.00 0.00 0.00 2.83
2494 2721 5.038683 GGCTACCAAAACACAACTACAAAC 58.961 41.667 0.00 0.00 0.00 2.93
2495 2722 5.163591 GGCTACCAAAACACAACTACAAACT 60.164 40.000 0.00 0.00 0.00 2.66
2496 2723 6.038492 GGCTACCAAAACACAACTACAAACTA 59.962 38.462 0.00 0.00 0.00 2.24
2497 2724 7.130269 GCTACCAAAACACAACTACAAACTAG 58.870 38.462 0.00 0.00 0.00 2.57
2498 2725 5.886992 ACCAAAACACAACTACAAACTAGC 58.113 37.500 0.00 0.00 0.00 3.42
2499 2726 5.650703 ACCAAAACACAACTACAAACTAGCT 59.349 36.000 0.00 0.00 0.00 3.32
2500 2727 6.183360 ACCAAAACACAACTACAAACTAGCTC 60.183 38.462 0.00 0.00 0.00 4.09
2501 2728 6.038271 CCAAAACACAACTACAAACTAGCTCT 59.962 38.462 0.00 0.00 0.00 4.09
2502 2729 6.604735 AAACACAACTACAAACTAGCTCTG 57.395 37.500 0.00 0.00 0.00 3.35
2503 2730 4.058817 ACACAACTACAAACTAGCTCTGC 58.941 43.478 0.00 0.00 0.00 4.26
2504 2731 3.433615 CACAACTACAAACTAGCTCTGCC 59.566 47.826 0.00 0.00 0.00 4.85
2505 2732 3.003480 CAACTACAAACTAGCTCTGCCC 58.997 50.000 0.00 0.00 0.00 5.36
2506 2733 2.257207 ACTACAAACTAGCTCTGCCCA 58.743 47.619 0.00 0.00 0.00 5.36
2507 2734 2.637872 ACTACAAACTAGCTCTGCCCAA 59.362 45.455 0.00 0.00 0.00 4.12
2508 2735 2.656947 ACAAACTAGCTCTGCCCAAA 57.343 45.000 0.00 0.00 0.00 3.28
2509 2736 2.508526 ACAAACTAGCTCTGCCCAAAG 58.491 47.619 0.00 0.00 0.00 2.77
2510 2737 2.158608 ACAAACTAGCTCTGCCCAAAGT 60.159 45.455 0.00 0.00 0.00 2.66
2511 2738 2.481289 AACTAGCTCTGCCCAAAGTC 57.519 50.000 0.00 0.00 0.00 3.01
2512 2739 0.247736 ACTAGCTCTGCCCAAAGTCG 59.752 55.000 0.00 0.00 0.00 4.18
2513 2740 1.079127 TAGCTCTGCCCAAAGTCGC 60.079 57.895 0.00 0.00 0.00 5.19
2514 2741 2.521958 TAGCTCTGCCCAAAGTCGCC 62.522 60.000 0.00 0.00 0.00 5.54
2515 2742 2.032528 CTCTGCCCAAAGTCGCCA 59.967 61.111 0.00 0.00 0.00 5.69
2516 2743 2.032528 TCTGCCCAAAGTCGCCAG 59.967 61.111 0.00 0.00 0.00 4.85
2517 2744 3.741476 CTGCCCAAAGTCGCCAGC 61.741 66.667 0.00 0.00 0.00 4.85
2518 2745 4.577677 TGCCCAAAGTCGCCAGCA 62.578 61.111 0.00 0.00 0.00 4.41
2519 2746 3.064324 GCCCAAAGTCGCCAGCAT 61.064 61.111 0.00 0.00 0.00 3.79
2520 2747 2.639327 GCCCAAAGTCGCCAGCATT 61.639 57.895 0.00 0.00 0.00 3.56
2521 2748 1.312371 GCCCAAAGTCGCCAGCATTA 61.312 55.000 0.00 0.00 0.00 1.90
2522 2749 0.451783 CCCAAAGTCGCCAGCATTAC 59.548 55.000 0.00 0.00 0.00 1.89
2523 2750 0.451783 CCAAAGTCGCCAGCATTACC 59.548 55.000 0.00 0.00 0.00 2.85
2524 2751 1.453155 CAAAGTCGCCAGCATTACCT 58.547 50.000 0.00 0.00 0.00 3.08
2525 2752 1.398390 CAAAGTCGCCAGCATTACCTC 59.602 52.381 0.00 0.00 0.00 3.85
2526 2753 0.613260 AAGTCGCCAGCATTACCTCA 59.387 50.000 0.00 0.00 0.00 3.86
2527 2754 0.108138 AGTCGCCAGCATTACCTCAC 60.108 55.000 0.00 0.00 0.00 3.51
2528 2755 0.391130 GTCGCCAGCATTACCTCACA 60.391 55.000 0.00 0.00 0.00 3.58
2529 2756 0.323302 TCGCCAGCATTACCTCACAA 59.677 50.000 0.00 0.00 0.00 3.33
2530 2757 0.729116 CGCCAGCATTACCTCACAAG 59.271 55.000 0.00 0.00 0.00 3.16
2531 2758 1.675714 CGCCAGCATTACCTCACAAGA 60.676 52.381 0.00 0.00 0.00 3.02
2532 2759 2.436417 GCCAGCATTACCTCACAAGAA 58.564 47.619 0.00 0.00 0.00 2.52
2533 2760 2.421424 GCCAGCATTACCTCACAAGAAG 59.579 50.000 0.00 0.00 0.00 2.85
2534 2761 2.421424 CCAGCATTACCTCACAAGAAGC 59.579 50.000 0.00 0.00 0.00 3.86
2535 2762 3.076621 CAGCATTACCTCACAAGAAGCA 58.923 45.455 0.00 0.00 0.00 3.91
2536 2763 3.126514 CAGCATTACCTCACAAGAAGCAG 59.873 47.826 0.00 0.00 0.00 4.24
2537 2764 3.008375 AGCATTACCTCACAAGAAGCAGA 59.992 43.478 0.00 0.00 0.00 4.26
2538 2765 3.373439 GCATTACCTCACAAGAAGCAGAG 59.627 47.826 0.00 0.00 0.00 3.35
2539 2766 4.573900 CATTACCTCACAAGAAGCAGAGT 58.426 43.478 0.00 0.00 0.00 3.24
2540 2767 5.724328 CATTACCTCACAAGAAGCAGAGTA 58.276 41.667 0.00 0.00 0.00 2.59
2541 2768 5.801531 TTACCTCACAAGAAGCAGAGTAA 57.198 39.130 0.00 0.00 0.00 2.24
2542 2769 4.689612 ACCTCACAAGAAGCAGAGTAAA 57.310 40.909 0.00 0.00 0.00 2.01
2543 2770 4.381411 ACCTCACAAGAAGCAGAGTAAAC 58.619 43.478 0.00 0.00 0.00 2.01
2544 2771 4.141711 ACCTCACAAGAAGCAGAGTAAACA 60.142 41.667 0.00 0.00 0.00 2.83
2545 2772 4.999950 CCTCACAAGAAGCAGAGTAAACAT 59.000 41.667 0.00 0.00 0.00 2.71
2546 2773 5.121454 CCTCACAAGAAGCAGAGTAAACATC 59.879 44.000 0.00 0.00 0.00 3.06
2547 2774 4.997395 TCACAAGAAGCAGAGTAAACATCC 59.003 41.667 0.00 0.00 0.00 3.51
2548 2775 4.756642 CACAAGAAGCAGAGTAAACATCCA 59.243 41.667 0.00 0.00 0.00 3.41
2549 2776 4.757149 ACAAGAAGCAGAGTAAACATCCAC 59.243 41.667 0.00 0.00 0.00 4.02
2550 2777 4.623932 AGAAGCAGAGTAAACATCCACA 57.376 40.909 0.00 0.00 0.00 4.17
2551 2778 5.171339 AGAAGCAGAGTAAACATCCACAT 57.829 39.130 0.00 0.00 0.00 3.21
2552 2779 5.181748 AGAAGCAGAGTAAACATCCACATC 58.818 41.667 0.00 0.00 0.00 3.06
2553 2780 3.525537 AGCAGAGTAAACATCCACATCG 58.474 45.455 0.00 0.00 0.00 3.84
2554 2781 3.055819 AGCAGAGTAAACATCCACATCGT 60.056 43.478 0.00 0.00 0.00 3.73
2555 2782 3.684788 GCAGAGTAAACATCCACATCGTT 59.315 43.478 0.00 0.00 0.00 3.85
2556 2783 4.436050 GCAGAGTAAACATCCACATCGTTG 60.436 45.833 0.00 0.00 0.00 4.10
2557 2784 4.093408 CAGAGTAAACATCCACATCGTTGG 59.907 45.833 0.00 0.00 38.10 3.77
2574 2801 3.855950 CGTTGGACGAACACTTATAGACC 59.144 47.826 1.13 0.00 46.05 3.85
2575 2802 3.770263 TGGACGAACACTTATAGACCG 57.230 47.619 0.00 0.00 0.00 4.79
2576 2803 2.159338 TGGACGAACACTTATAGACCGC 60.159 50.000 0.00 0.00 0.00 5.68
2577 2804 2.107178 GACGAACACTTATAGACCGCG 58.893 52.381 0.00 0.00 0.00 6.46
2578 2805 1.739466 ACGAACACTTATAGACCGCGA 59.261 47.619 8.23 0.00 0.00 5.87
2579 2806 2.357009 ACGAACACTTATAGACCGCGAT 59.643 45.455 8.23 0.00 0.00 4.58
2580 2807 2.719556 CGAACACTTATAGACCGCGATG 59.280 50.000 8.23 0.00 0.00 3.84
2581 2808 3.703420 GAACACTTATAGACCGCGATGT 58.297 45.455 8.23 0.00 0.00 3.06
2582 2809 3.351020 ACACTTATAGACCGCGATGTC 57.649 47.619 8.23 7.68 35.43 3.06
2583 2810 2.286831 ACACTTATAGACCGCGATGTCG 60.287 50.000 8.23 0.00 40.26 4.35
2584 2811 1.945394 ACTTATAGACCGCGATGTCGT 59.055 47.619 8.23 4.75 40.26 4.34
2597 2824 2.024176 ATGTCGTGCACATCTAACCC 57.976 50.000 18.64 0.00 42.62 4.11
2598 2825 0.389296 TGTCGTGCACATCTAACCCG 60.389 55.000 18.64 0.00 0.00 5.28
2599 2826 0.389426 GTCGTGCACATCTAACCCGT 60.389 55.000 18.64 0.00 0.00 5.28
2600 2827 0.108992 TCGTGCACATCTAACCCGTC 60.109 55.000 18.64 0.00 0.00 4.79
2601 2828 1.410737 CGTGCACATCTAACCCGTCG 61.411 60.000 18.64 0.00 0.00 5.12
2602 2829 0.108992 GTGCACATCTAACCCGTCGA 60.109 55.000 13.17 0.00 0.00 4.20
2603 2830 0.604073 TGCACATCTAACCCGTCGAA 59.396 50.000 0.00 0.00 0.00 3.71
2604 2831 1.001068 TGCACATCTAACCCGTCGAAA 59.999 47.619 0.00 0.00 0.00 3.46
2605 2832 1.659098 GCACATCTAACCCGTCGAAAG 59.341 52.381 0.00 0.00 0.00 2.62
2606 2833 1.659098 CACATCTAACCCGTCGAAAGC 59.341 52.381 0.00 0.00 0.00 3.51
2607 2834 1.274167 ACATCTAACCCGTCGAAAGCA 59.726 47.619 0.00 0.00 0.00 3.91
2608 2835 1.659098 CATCTAACCCGTCGAAAGCAC 59.341 52.381 0.00 0.00 0.00 4.40
2609 2836 0.675083 TCTAACCCGTCGAAAGCACA 59.325 50.000 0.00 0.00 0.00 4.57
2610 2837 1.068895 TCTAACCCGTCGAAAGCACAA 59.931 47.619 0.00 0.00 0.00 3.33
2611 2838 1.193874 CTAACCCGTCGAAAGCACAAC 59.806 52.381 0.00 0.00 0.00 3.32
2612 2839 1.441732 AACCCGTCGAAAGCACAACC 61.442 55.000 0.00 0.00 0.00 3.77
2613 2840 2.549282 CCGTCGAAAGCACAACCG 59.451 61.111 0.00 0.00 0.00 4.44
2614 2841 2.549282 CGTCGAAAGCACAACCGG 59.451 61.111 0.00 0.00 0.00 5.28
2615 2842 2.943653 GTCGAAAGCACAACCGGG 59.056 61.111 6.32 0.00 0.00 5.73
2616 2843 2.281208 TCGAAAGCACAACCGGGG 60.281 61.111 6.32 0.00 0.00 5.73
2617 2844 4.038080 CGAAAGCACAACCGGGGC 62.038 66.667 6.32 3.68 0.00 5.80
2618 2845 3.680786 GAAAGCACAACCGGGGCC 61.681 66.667 6.32 0.00 0.00 5.80
2619 2846 4.531426 AAAGCACAACCGGGGCCA 62.531 61.111 6.32 0.00 0.00 5.36
2620 2847 4.531426 AAGCACAACCGGGGCCAA 62.531 61.111 6.32 0.00 0.00 4.52
2621 2848 4.974721 AGCACAACCGGGGCCAAG 62.975 66.667 6.32 0.00 0.00 3.61
2623 2850 4.278513 CACAACCGGGGCCAAGGA 62.279 66.667 21.92 0.00 0.00 3.36
2624 2851 4.280019 ACAACCGGGGCCAAGGAC 62.280 66.667 21.92 0.00 0.00 3.85
2625 2852 3.966543 CAACCGGGGCCAAGGACT 61.967 66.667 21.92 7.40 0.00 3.85
2626 2853 3.647771 AACCGGGGCCAAGGACTC 61.648 66.667 21.92 0.00 0.00 3.36
2629 2856 3.646715 CGGGGCCAAGGACTCCAA 61.647 66.667 4.39 0.00 0.00 3.53
2630 2857 2.851045 GGGGCCAAGGACTCCAAA 59.149 61.111 4.39 0.00 0.00 3.28
2631 2858 1.155155 GGGGCCAAGGACTCCAAAA 59.845 57.895 4.39 0.00 0.00 2.44
2632 2859 1.185618 GGGGCCAAGGACTCCAAAAC 61.186 60.000 4.39 0.00 0.00 2.43
2633 2860 1.524008 GGGCCAAGGACTCCAAAACG 61.524 60.000 4.39 0.00 0.00 3.60
2634 2861 1.524008 GGCCAAGGACTCCAAAACGG 61.524 60.000 0.00 0.00 0.00 4.44
2635 2862 0.536460 GCCAAGGACTCCAAAACGGA 60.536 55.000 0.00 0.00 43.61 4.69
2636 2863 1.886655 GCCAAGGACTCCAAAACGGAT 60.887 52.381 0.00 0.00 45.19 4.18
2637 2864 2.084546 CCAAGGACTCCAAAACGGATC 58.915 52.381 0.00 0.00 45.19 3.36
2638 2865 2.084546 CAAGGACTCCAAAACGGATCC 58.915 52.381 0.00 0.00 45.19 3.36
2639 2866 1.657804 AGGACTCCAAAACGGATCCT 58.342 50.000 10.75 0.00 45.19 3.24
2640 2867 1.985895 AGGACTCCAAAACGGATCCTT 59.014 47.619 10.75 0.00 43.66 3.36
2641 2868 2.084546 GGACTCCAAAACGGATCCTTG 58.915 52.381 10.75 7.70 45.19 3.61
2642 2869 2.290071 GGACTCCAAAACGGATCCTTGA 60.290 50.000 10.75 0.00 45.19 3.02
2643 2870 3.408634 GACTCCAAAACGGATCCTTGAA 58.591 45.455 10.75 0.00 45.19 2.69
2644 2871 3.412386 ACTCCAAAACGGATCCTTGAAG 58.588 45.455 10.75 3.49 45.19 3.02
2645 2872 3.072476 ACTCCAAAACGGATCCTTGAAGA 59.928 43.478 10.75 1.26 45.19 2.87
2646 2873 3.674997 TCCAAAACGGATCCTTGAAGAG 58.325 45.455 10.75 0.00 39.64 2.85
2647 2874 2.749621 CCAAAACGGATCCTTGAAGAGG 59.250 50.000 10.75 0.00 41.92 3.69
2648 2875 2.749621 CAAAACGGATCCTTGAAGAGGG 59.250 50.000 10.75 0.00 46.31 4.30
2649 2876 1.952621 AACGGATCCTTGAAGAGGGA 58.047 50.000 10.75 0.00 46.31 4.20
2650 2877 1.952621 ACGGATCCTTGAAGAGGGAA 58.047 50.000 10.75 0.00 46.31 3.97
2651 2878 2.482494 ACGGATCCTTGAAGAGGGAAT 58.518 47.619 10.75 0.00 46.31 3.01
2652 2879 3.654273 ACGGATCCTTGAAGAGGGAATA 58.346 45.455 10.75 0.00 46.31 1.75
2653 2880 3.388350 ACGGATCCTTGAAGAGGGAATAC 59.612 47.826 10.75 0.00 46.31 1.89
2654 2881 3.553096 CGGATCCTTGAAGAGGGAATACG 60.553 52.174 10.75 0.00 46.31 3.06
2655 2882 3.244249 GGATCCTTGAAGAGGGAATACGG 60.244 52.174 3.84 0.00 46.31 4.02
2656 2883 1.485066 TCCTTGAAGAGGGAATACGGC 59.515 52.381 0.00 0.00 46.31 5.68
2657 2884 1.475213 CCTTGAAGAGGGAATACGGCC 60.475 57.143 0.00 0.00 42.26 6.13
2658 2885 1.209504 CTTGAAGAGGGAATACGGCCA 59.790 52.381 2.24 0.00 0.00 5.36
2659 2886 0.539986 TGAAGAGGGAATACGGCCAC 59.460 55.000 2.24 0.00 0.00 5.01
2660 2887 0.831307 GAAGAGGGAATACGGCCACT 59.169 55.000 2.24 0.00 0.00 4.00
2661 2888 2.037144 GAAGAGGGAATACGGCCACTA 58.963 52.381 2.24 0.00 0.00 2.74
2662 2889 2.170012 AGAGGGAATACGGCCACTAA 57.830 50.000 2.24 0.00 0.00 2.24
2663 2890 2.474112 AGAGGGAATACGGCCACTAAA 58.526 47.619 2.24 0.00 0.00 1.85
2664 2891 2.841881 AGAGGGAATACGGCCACTAAAA 59.158 45.455 2.24 0.00 0.00 1.52
2665 2892 3.264964 AGAGGGAATACGGCCACTAAAAA 59.735 43.478 2.24 0.00 0.00 1.94
2666 2893 3.617284 AGGGAATACGGCCACTAAAAAG 58.383 45.455 2.24 0.00 0.00 2.27
2667 2894 2.686405 GGGAATACGGCCACTAAAAAGG 59.314 50.000 2.24 0.00 0.00 3.11
2668 2895 2.686405 GGAATACGGCCACTAAAAAGGG 59.314 50.000 2.24 0.00 0.00 3.95
2669 2896 1.758936 ATACGGCCACTAAAAAGGGC 58.241 50.000 2.24 0.00 46.99 5.19
2677 2904 4.641396 GCCACTAAAAAGGGCAAAAATCT 58.359 39.130 0.00 0.00 46.92 2.40
2678 2905 5.789521 GCCACTAAAAAGGGCAAAAATCTA 58.210 37.500 0.00 0.00 46.92 1.98
2679 2906 6.406370 GCCACTAAAAAGGGCAAAAATCTAT 58.594 36.000 0.00 0.00 46.92 1.98
2680 2907 7.552459 GCCACTAAAAAGGGCAAAAATCTATA 58.448 34.615 0.00 0.00 46.92 1.31
2681 2908 8.038351 GCCACTAAAAAGGGCAAAAATCTATAA 58.962 33.333 0.00 0.00 46.92 0.98
2682 2909 9.586435 CCACTAAAAAGGGCAAAAATCTATAAG 57.414 33.333 0.00 0.00 0.00 1.73
2686 2913 8.831715 AAAAAGGGCAAAAATCTATAAGTGTG 57.168 30.769 0.00 0.00 0.00 3.82
2687 2914 5.582689 AGGGCAAAAATCTATAAGTGTGC 57.417 39.130 0.00 0.00 0.00 4.57
2688 2915 5.016173 AGGGCAAAAATCTATAAGTGTGCA 58.984 37.500 0.00 0.00 32.41 4.57
2689 2916 5.480073 AGGGCAAAAATCTATAAGTGTGCAA 59.520 36.000 0.00 0.00 32.41 4.08
2690 2917 6.014669 AGGGCAAAAATCTATAAGTGTGCAAA 60.015 34.615 0.00 0.00 32.41 3.68
2691 2918 6.090763 GGGCAAAAATCTATAAGTGTGCAAAC 59.909 38.462 0.00 0.00 32.41 2.93
2692 2919 6.183359 GGCAAAAATCTATAAGTGTGCAAACG 60.183 38.462 0.16 0.00 32.41 3.60
2693 2920 6.580791 GCAAAAATCTATAAGTGTGCAAACGA 59.419 34.615 0.16 0.00 0.00 3.85
2694 2921 7.201266 GCAAAAATCTATAAGTGTGCAAACGAG 60.201 37.037 0.16 0.00 0.00 4.18
2695 2922 5.470845 AATCTATAAGTGTGCAAACGAGC 57.529 39.130 0.16 0.00 0.00 5.03
2696 2923 4.188247 TCTATAAGTGTGCAAACGAGCT 57.812 40.909 0.16 0.00 34.99 4.09
2697 2924 4.174009 TCTATAAGTGTGCAAACGAGCTC 58.826 43.478 2.73 2.73 34.99 4.09
2698 2925 1.136690 TAAGTGTGCAAACGAGCTCG 58.863 50.000 33.45 33.45 46.33 5.03
2699 2926 0.529773 AAGTGTGCAAACGAGCTCGA 60.530 50.000 40.58 17.00 43.02 4.04
2700 2927 0.529773 AGTGTGCAAACGAGCTCGAA 60.530 50.000 40.58 17.87 43.02 3.71
2701 2928 0.303493 GTGTGCAAACGAGCTCGAAA 59.697 50.000 40.58 18.21 43.02 3.46
2702 2929 0.303493 TGTGCAAACGAGCTCGAAAC 59.697 50.000 40.58 26.90 43.02 2.78
2703 2930 0.582005 GTGCAAACGAGCTCGAAACT 59.418 50.000 40.58 17.41 43.02 2.66
2704 2931 0.581529 TGCAAACGAGCTCGAAACTG 59.418 50.000 40.58 28.09 43.02 3.16
2705 2932 0.110644 GCAAACGAGCTCGAAACTGG 60.111 55.000 40.58 22.65 43.02 4.00
2706 2933 1.497991 CAAACGAGCTCGAAACTGGA 58.502 50.000 40.58 0.00 43.02 3.86
2707 2934 2.069273 CAAACGAGCTCGAAACTGGAT 58.931 47.619 40.58 14.59 43.02 3.41
2708 2935 1.714794 AACGAGCTCGAAACTGGATG 58.285 50.000 40.58 9.75 43.02 3.51
2709 2936 0.888619 ACGAGCTCGAAACTGGATGA 59.111 50.000 40.58 0.00 43.02 2.92
2710 2937 1.272490 ACGAGCTCGAAACTGGATGAA 59.728 47.619 40.58 0.00 43.02 2.57
2711 2938 2.288825 ACGAGCTCGAAACTGGATGAAA 60.289 45.455 40.58 0.00 43.02 2.69
2712 2939 2.092838 CGAGCTCGAAACTGGATGAAAC 59.907 50.000 32.06 0.00 43.02 2.78
2713 2940 3.330267 GAGCTCGAAACTGGATGAAACT 58.670 45.455 0.00 0.00 0.00 2.66
2714 2941 3.744660 AGCTCGAAACTGGATGAAACTT 58.255 40.909 0.00 0.00 0.00 2.66
2715 2942 3.499918 AGCTCGAAACTGGATGAAACTTG 59.500 43.478 0.00 0.00 0.00 3.16
2716 2943 3.365364 GCTCGAAACTGGATGAAACTTGG 60.365 47.826 0.00 0.00 0.00 3.61
2717 2944 4.065088 CTCGAAACTGGATGAAACTTGGA 58.935 43.478 0.00 0.00 0.00 3.53
2718 2945 4.456535 TCGAAACTGGATGAAACTTGGAA 58.543 39.130 0.00 0.00 0.00 3.53
2719 2946 4.274950 TCGAAACTGGATGAAACTTGGAAC 59.725 41.667 0.00 0.00 0.00 3.62
2720 2947 4.537015 GAAACTGGATGAAACTTGGAACG 58.463 43.478 0.00 0.00 0.00 3.95
2721 2948 2.504367 ACTGGATGAAACTTGGAACGG 58.496 47.619 0.00 0.00 0.00 4.44
2722 2949 2.158667 ACTGGATGAAACTTGGAACGGT 60.159 45.455 0.00 0.00 0.00 4.83
2723 2950 2.226330 TGGATGAAACTTGGAACGGTG 58.774 47.619 0.00 0.00 0.00 4.94
2724 2951 2.227194 GGATGAAACTTGGAACGGTGT 58.773 47.619 0.00 0.00 0.00 4.16
2725 2952 2.225727 GGATGAAACTTGGAACGGTGTC 59.774 50.000 0.00 0.00 0.00 3.67
2726 2953 2.702592 TGAAACTTGGAACGGTGTCT 57.297 45.000 0.00 0.00 0.00 3.41
2727 2954 2.993937 TGAAACTTGGAACGGTGTCTT 58.006 42.857 0.00 0.00 0.00 3.01
2728 2955 2.940410 TGAAACTTGGAACGGTGTCTTC 59.060 45.455 0.00 0.00 0.00 2.87
2729 2956 2.702592 AACTTGGAACGGTGTCTTCA 57.297 45.000 0.00 0.00 0.00 3.02
2730 2957 2.930826 ACTTGGAACGGTGTCTTCAT 57.069 45.000 0.00 0.00 0.00 2.57
2731 2958 4.345859 AACTTGGAACGGTGTCTTCATA 57.654 40.909 0.00 0.00 0.00 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
287 306 1.067985 CATCGCATATCTCAGGTCGCT 60.068 52.381 0.00 0.00 0.00 4.93
460 495 1.545614 CGAAAGTGTGTCGTCGTGGG 61.546 60.000 0.00 0.00 33.80 4.61
500 535 0.688087 GGTCGTCCCCTCCTCTCAAT 60.688 60.000 0.00 0.00 0.00 2.57
638 673 1.869690 GTTCCAAGCGTCAAGAGGC 59.130 57.895 6.64 6.64 42.05 4.70
798 868 2.022764 TTCGTACTCGTCCCGTATGA 57.977 50.000 0.00 0.00 38.33 2.15
801 873 1.136085 CGTTTTCGTACTCGTCCCGTA 60.136 52.381 0.00 0.00 38.65 4.02
817 889 4.272991 TGGCACTTAATTCGTGTTACGTTT 59.727 37.500 0.00 0.51 43.14 3.60
829 902 3.057526 GCGTTTCTTCCTGGCACTTAATT 60.058 43.478 0.00 0.00 0.00 1.40
858 934 0.317938 AGATCGATCGCCTGCGTAAC 60.318 55.000 19.33 3.77 40.74 2.50
916 996 1.493022 ACATTTTATAGGGGGCGCTCA 59.507 47.619 10.74 0.00 0.00 4.26
924 1004 4.514066 GCGAGGGTACAACATTTTATAGGG 59.486 45.833 0.00 0.00 0.00 3.53
925 1005 4.514066 GGCGAGGGTACAACATTTTATAGG 59.486 45.833 0.00 0.00 0.00 2.57
930 1010 2.579410 AGGCGAGGGTACAACATTTT 57.421 45.000 0.00 0.00 0.00 1.82
936 1016 2.158726 AGAAACAAAGGCGAGGGTACAA 60.159 45.455 0.00 0.00 0.00 2.41
951 1031 1.133915 GGTGTGGGGTGAAGAGAAACA 60.134 52.381 0.00 0.00 0.00 2.83
1032 1116 3.259633 AAGGAGGAGCGCCACAAGG 62.260 63.158 9.88 0.00 36.29 3.61
1172 1265 4.980805 TTGGCAGCACGTCGGGTC 62.981 66.667 0.00 0.00 0.00 4.46
1384 1546 3.170362 CTCCTCACCCTTGGGCAA 58.830 61.111 5.46 0.00 0.00 4.52
1531 1705 3.319198 GGTCGGGAGTGGAGGCAA 61.319 66.667 0.00 0.00 0.00 4.52
1620 1794 1.152030 TGGCTCCTCTGTCTTGGGT 60.152 57.895 0.00 0.00 0.00 4.51
1623 1797 1.079543 CGGTGGCTCCTCTGTCTTG 60.080 63.158 3.83 0.00 0.00 3.02
1624 1798 0.832135 TTCGGTGGCTCCTCTGTCTT 60.832 55.000 3.83 0.00 0.00 3.01
1625 1799 1.228894 TTCGGTGGCTCCTCTGTCT 60.229 57.895 3.83 0.00 0.00 3.41
1626 1800 1.216710 CTTCGGTGGCTCCTCTGTC 59.783 63.158 3.83 0.00 0.00 3.51
1627 1801 2.948720 GCTTCGGTGGCTCCTCTGT 61.949 63.158 3.83 0.00 0.00 3.41
1629 1803 3.394836 GGCTTCGGTGGCTCCTCT 61.395 66.667 3.83 0.00 0.00 3.69
1663 1867 1.004918 GTGCAAGCTCACCGGTAGT 60.005 57.895 6.87 0.00 0.00 2.73
1805 2015 4.437587 GTGGATGGCAGGCAGGCT 62.438 66.667 1.89 0.00 44.55 4.58
1815 2025 3.682858 ACGTAGAAACAAATCGTGGATGG 59.317 43.478 0.00 0.00 33.55 3.51
1822 2032 3.323243 ACAGGGACGTAGAAACAAATCG 58.677 45.455 0.00 0.00 0.00 3.34
1838 2054 3.885297 ACATTCTCAACAACTCAACAGGG 59.115 43.478 0.00 0.00 0.00 4.45
1854 2070 7.726216 TGTATGGATACGATCTCAAACATTCT 58.274 34.615 0.00 0.00 42.51 2.40
1889 2105 4.901849 TCTTACATTATGGGACTGAGGGAG 59.098 45.833 0.00 0.00 0.00 4.30
1890 2106 4.654262 GTCTTACATTATGGGACTGAGGGA 59.346 45.833 0.00 0.00 0.00 4.20
1891 2107 4.501571 CGTCTTACATTATGGGACTGAGGG 60.502 50.000 0.00 0.00 0.00 4.30
1892 2108 4.099573 ACGTCTTACATTATGGGACTGAGG 59.900 45.833 0.00 0.00 0.00 3.86
1893 2109 5.263968 ACGTCTTACATTATGGGACTGAG 57.736 43.478 0.00 0.00 0.00 3.35
1894 2110 5.046878 ACAACGTCTTACATTATGGGACTGA 60.047 40.000 0.00 0.00 0.00 3.41
1895 2111 5.175859 ACAACGTCTTACATTATGGGACTG 58.824 41.667 0.00 1.38 0.00 3.51
1896 2112 5.416271 ACAACGTCTTACATTATGGGACT 57.584 39.130 0.00 0.00 0.00 3.85
1897 2113 7.599630 TTTACAACGTCTTACATTATGGGAC 57.400 36.000 0.00 1.75 0.00 4.46
1898 2114 8.031848 GTTTTACAACGTCTTACATTATGGGA 57.968 34.615 0.00 0.00 0.00 4.37
1949 2165 6.878923 TCCGTCTCATAATGTCAGACATTTTT 59.121 34.615 29.55 17.01 45.80 1.94
1950 2166 6.406370 TCCGTCTCATAATGTCAGACATTTT 58.594 36.000 29.55 20.75 45.80 1.82
1951 2167 5.977635 TCCGTCTCATAATGTCAGACATTT 58.022 37.500 29.55 16.55 45.80 2.32
1953 2169 4.038522 CCTCCGTCTCATAATGTCAGACAT 59.961 45.833 10.53 10.53 41.31 3.06
1954 2170 3.381590 CCTCCGTCTCATAATGTCAGACA 59.618 47.826 5.50 5.50 37.05 3.41
1955 2171 3.243569 CCCTCCGTCTCATAATGTCAGAC 60.244 52.174 0.00 0.00 34.36 3.51
1956 2172 2.959030 CCCTCCGTCTCATAATGTCAGA 59.041 50.000 0.00 0.00 0.00 3.27
1957 2173 2.959030 TCCCTCCGTCTCATAATGTCAG 59.041 50.000 0.00 0.00 0.00 3.51
1958 2174 2.959030 CTCCCTCCGTCTCATAATGTCA 59.041 50.000 0.00 0.00 0.00 3.58
1959 2175 2.959707 ACTCCCTCCGTCTCATAATGTC 59.040 50.000 0.00 0.00 0.00 3.06
1960 2176 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
1961 2177 5.946972 AGTATACTCCCTCCGTCTCATAATG 59.053 44.000 0.00 0.00 0.00 1.90
1962 2178 6.142259 AGTATACTCCCTCCGTCTCATAAT 57.858 41.667 0.00 0.00 0.00 1.28
1963 2179 5.579753 AGTATACTCCCTCCGTCTCATAA 57.420 43.478 0.00 0.00 0.00 1.90
1964 2180 6.692849 TTAGTATACTCCCTCCGTCTCATA 57.307 41.667 9.12 0.00 0.00 2.15
1965 2181 5.579753 TTAGTATACTCCCTCCGTCTCAT 57.420 43.478 9.12 0.00 0.00 2.90
1966 2182 5.579753 ATTAGTATACTCCCTCCGTCTCA 57.420 43.478 9.12 0.00 0.00 3.27
1967 2183 7.992754 TTAATTAGTATACTCCCTCCGTCTC 57.007 40.000 9.12 0.00 0.00 3.36
1968 2184 7.232330 GGTTTAATTAGTATACTCCCTCCGTCT 59.768 40.741 9.12 0.00 0.00 4.18
1969 2185 7.374272 GGTTTAATTAGTATACTCCCTCCGTC 58.626 42.308 9.12 0.00 0.00 4.79
1970 2186 6.015940 CGGTTTAATTAGTATACTCCCTCCGT 60.016 42.308 9.12 0.00 0.00 4.69
1971 2187 6.015940 ACGGTTTAATTAGTATACTCCCTCCG 60.016 42.308 9.12 16.07 37.26 4.63
1972 2188 7.014615 TGACGGTTTAATTAGTATACTCCCTCC 59.985 40.741 9.12 3.90 0.00 4.30
1973 2189 7.945134 TGACGGTTTAATTAGTATACTCCCTC 58.055 38.462 9.12 3.12 0.00 4.30
1974 2190 7.902920 TGACGGTTTAATTAGTATACTCCCT 57.097 36.000 9.12 0.00 0.00 4.20
1975 2191 8.362639 TGATGACGGTTTAATTAGTATACTCCC 58.637 37.037 9.12 0.00 0.00 4.30
1976 2192 9.189723 GTGATGACGGTTTAATTAGTATACTCC 57.810 37.037 9.12 1.48 0.00 3.85
1977 2193 8.899776 CGTGATGACGGTTTAATTAGTATACTC 58.100 37.037 9.12 0.00 42.18 2.59
1978 2194 8.792831 CGTGATGACGGTTTAATTAGTATACT 57.207 34.615 10.87 10.87 42.18 2.12
1995 2211 5.034797 TGAATCGATCTTACACGTGATGAC 58.965 41.667 25.01 7.29 0.00 3.06
1996 2212 5.034797 GTGAATCGATCTTACACGTGATGA 58.965 41.667 25.01 16.42 0.00 2.92
1997 2213 4.207224 GGTGAATCGATCTTACACGTGATG 59.793 45.833 25.01 11.46 33.08 3.07
1998 2214 4.360563 GGTGAATCGATCTTACACGTGAT 58.639 43.478 25.01 4.58 33.08 3.06
1999 2215 3.729762 CGGTGAATCGATCTTACACGTGA 60.730 47.826 25.01 2.68 33.08 4.35
2000 2216 2.530297 CGGTGAATCGATCTTACACGTG 59.470 50.000 15.48 15.48 33.08 4.49
2001 2217 2.479049 CCGGTGAATCGATCTTACACGT 60.479 50.000 0.00 0.00 33.08 4.49
2002 2218 2.117137 CCGGTGAATCGATCTTACACG 58.883 52.381 0.00 4.84 33.08 4.49
2003 2219 3.431922 TCCGGTGAATCGATCTTACAC 57.568 47.619 0.00 7.33 0.00 2.90
2004 2220 3.383505 ACATCCGGTGAATCGATCTTACA 59.616 43.478 0.00 0.00 0.00 2.41
2019 2241 3.687698 ACCGACTTGAAATAAACATCCGG 59.312 43.478 0.00 0.00 39.14 5.14
2027 2249 9.887406 GACAATTTTAAGACCGACTTGAAATAA 57.113 29.630 17.67 0.63 46.58 1.40
2048 2270 9.418045 CGGTTTTCCAATAATTAACTTGACAAT 57.582 29.630 1.17 0.00 40.70 2.71
2053 2275 6.250527 CGCTCGGTTTTCCAATAATTAACTTG 59.749 38.462 0.00 0.00 40.70 3.16
2054 2276 6.149807 TCGCTCGGTTTTCCAATAATTAACTT 59.850 34.615 0.00 0.00 40.70 2.66
2055 2277 5.644636 TCGCTCGGTTTTCCAATAATTAACT 59.355 36.000 0.00 0.00 40.70 2.24
2056 2278 5.871539 TCGCTCGGTTTTCCAATAATTAAC 58.128 37.500 0.00 0.00 40.70 2.01
2064 2286 2.018515 AGTTTTCGCTCGGTTTTCCAA 58.981 42.857 0.00 0.00 40.70 3.53
2065 2287 1.670791 AGTTTTCGCTCGGTTTTCCA 58.329 45.000 0.00 0.00 40.70 3.53
2067 2289 4.084223 TGTGATAGTTTTCGCTCGGTTTTC 60.084 41.667 0.00 0.00 0.00 2.29
2077 2299 4.024893 CCGGGAATGATGTGATAGTTTTCG 60.025 45.833 0.00 0.00 0.00 3.46
2084 2306 5.257262 TGTTTTTCCGGGAATGATGTGATA 58.743 37.500 10.86 0.00 0.00 2.15
2085 2307 4.085733 TGTTTTTCCGGGAATGATGTGAT 58.914 39.130 10.86 0.00 0.00 3.06
2094 2316 0.397254 TTGCCCTGTTTTTCCGGGAA 60.397 50.000 5.09 5.09 42.27 3.97
2098 2320 2.295909 TCTTGATTGCCCTGTTTTTCCG 59.704 45.455 0.00 0.00 0.00 4.30
2100 2322 3.004315 TCGTCTTGATTGCCCTGTTTTTC 59.996 43.478 0.00 0.00 0.00 2.29
2107 2334 0.250513 GAGGTCGTCTTGATTGCCCT 59.749 55.000 0.00 0.00 0.00 5.19
2123 2350 3.499737 GCATTGTGGGTCGCGAGG 61.500 66.667 10.24 0.00 0.00 4.63
2126 2353 4.444024 CGTGCATTGTGGGTCGCG 62.444 66.667 0.00 0.00 0.00 5.87
2143 2370 4.210304 GCAATCTCGACGGCGTGC 62.210 66.667 21.19 9.91 38.98 5.34
2150 2377 0.165944 CACCCGTTTGCAATCTCGAC 59.834 55.000 16.68 4.78 0.00 4.20
2153 2380 1.234821 TGACACCCGTTTGCAATCTC 58.765 50.000 0.00 0.00 0.00 2.75
2163 2390 1.135199 GTGTATGACGATGACACCCGT 60.135 52.381 4.62 4.62 42.17 5.28
2174 2401 1.358725 CCTTGCGGTGGTGTATGACG 61.359 60.000 0.00 0.00 0.00 4.35
2178 2405 0.402504 TTTCCCTTGCGGTGGTGTAT 59.597 50.000 0.00 0.00 0.00 2.29
2186 2413 0.955919 GGTCTGAGTTTCCCTTGCGG 60.956 60.000 0.00 0.00 0.00 5.69
2187 2414 0.955919 GGGTCTGAGTTTCCCTTGCG 60.956 60.000 0.00 0.00 38.29 4.85
2195 2422 4.019681 TCGTAAATGATGGGGTCTGAGTTT 60.020 41.667 0.00 0.00 0.00 2.66
2201 2428 2.193127 TGGTCGTAAATGATGGGGTCT 58.807 47.619 0.00 0.00 0.00 3.85
2205 2432 3.106242 TCGATGGTCGTAAATGATGGG 57.894 47.619 0.00 0.00 41.35 4.00
2208 2435 4.923871 GCTACATCGATGGTCGTAAATGAT 59.076 41.667 28.09 6.20 41.35 2.45
2209 2436 4.295870 GCTACATCGATGGTCGTAAATGA 58.704 43.478 28.09 1.05 41.35 2.57
2212 2439 2.691526 AGGCTACATCGATGGTCGTAAA 59.308 45.455 28.09 4.91 41.35 2.01
2235 2462 1.827315 CGTGCACGTCGTTTGTGGAT 61.827 55.000 30.50 0.00 39.88 3.41
2236 2463 2.518312 CGTGCACGTCGTTTGTGGA 61.518 57.895 30.50 1.57 37.80 4.02
2240 2467 0.717896 CACATCGTGCACGTCGTTTG 60.718 55.000 35.74 25.87 40.80 2.93
2251 2478 1.522355 CTGGCCTAGGCACATCGTG 60.522 63.158 34.09 13.89 44.11 4.35
2252 2479 2.903357 CTGGCCTAGGCACATCGT 59.097 61.111 34.09 0.00 44.11 3.73
2253 2480 2.590007 GCTGGCCTAGGCACATCG 60.590 66.667 34.09 18.42 44.11 3.84
2268 2495 1.837947 TGGCTGTTTGGCATTGGCT 60.838 52.632 11.84 0.00 46.76 4.75
2290 2517 4.427661 ACAGAGTCGGAGCTGCGC 62.428 66.667 24.03 17.56 35.57 6.09
2291 2518 2.202544 GACAGAGTCGGAGCTGCG 60.203 66.667 22.84 22.84 35.57 5.18
2300 2527 0.448197 TGATGCTCGTCGACAGAGTC 59.552 55.000 26.57 20.55 37.99 3.36
2301 2528 0.169230 GTGATGCTCGTCGACAGAGT 59.831 55.000 26.57 15.30 37.99 3.24
2302 2529 0.169009 TGTGATGCTCGTCGACAGAG 59.831 55.000 23.94 23.94 38.68 3.35
2303 2530 0.169009 CTGTGATGCTCGTCGACAGA 59.831 55.000 17.16 12.55 36.89 3.41
2304 2531 0.799917 CCTGTGATGCTCGTCGACAG 60.800 60.000 17.16 12.82 34.95 3.51
2305 2532 1.212751 CCTGTGATGCTCGTCGACA 59.787 57.895 17.16 1.87 0.00 4.35
2306 2533 0.524392 CTCCTGTGATGCTCGTCGAC 60.524 60.000 5.18 5.18 0.00 4.20
2307 2534 0.676782 TCTCCTGTGATGCTCGTCGA 60.677 55.000 0.00 0.00 0.00 4.20
2308 2535 0.171231 TTCTCCTGTGATGCTCGTCG 59.829 55.000 0.00 0.00 0.00 5.12
2309 2536 2.370281 TTTCTCCTGTGATGCTCGTC 57.630 50.000 0.00 0.00 0.00 4.20
2310 2537 2.693069 CTTTTCTCCTGTGATGCTCGT 58.307 47.619 0.00 0.00 0.00 4.18
2311 2538 1.396301 GCTTTTCTCCTGTGATGCTCG 59.604 52.381 0.00 0.00 0.00 5.03
2312 2539 2.677337 GAGCTTTTCTCCTGTGATGCTC 59.323 50.000 0.00 0.00 38.77 4.26
2313 2540 2.305343 AGAGCTTTTCTCCTGTGATGCT 59.695 45.455 0.00 0.00 42.90 3.79
2314 2541 2.419324 CAGAGCTTTTCTCCTGTGATGC 59.581 50.000 0.00 0.00 42.90 3.91
2315 2542 3.008330 CCAGAGCTTTTCTCCTGTGATG 58.992 50.000 0.00 0.00 42.90 3.07
2316 2543 2.026449 CCCAGAGCTTTTCTCCTGTGAT 60.026 50.000 0.00 0.00 42.90 3.06
2317 2544 1.349026 CCCAGAGCTTTTCTCCTGTGA 59.651 52.381 0.00 0.00 42.90 3.58
2318 2545 1.818642 CCCAGAGCTTTTCTCCTGTG 58.181 55.000 0.00 0.00 42.90 3.66
2319 2546 0.037447 GCCCAGAGCTTTTCTCCTGT 59.963 55.000 0.00 0.00 42.90 4.00
2355 2582 2.111460 TTGGGTGGTCGGTTTCGG 59.889 61.111 0.00 0.00 36.95 4.30
2402 2629 0.390340 TCAAGTCGGATCTGCTGTGC 60.390 55.000 0.00 0.00 0.00 4.57
2405 2632 0.820226 TCCTCAAGTCGGATCTGCTG 59.180 55.000 0.00 0.00 0.00 4.41
2420 2647 2.155279 GGGCTTCACTTTGTCTTCCTC 58.845 52.381 0.00 0.00 0.00 3.71
2426 2653 2.954611 GCCGGGCTTCACTTTGTC 59.045 61.111 12.87 0.00 0.00 3.18
2459 2686 0.396435 TGGTAGCCGGCTTCATATGG 59.604 55.000 37.74 0.00 0.00 2.74
2460 2687 2.254546 TTGGTAGCCGGCTTCATATG 57.745 50.000 37.74 0.00 0.00 1.78
2461 2688 2.949644 GTTTTGGTAGCCGGCTTCATAT 59.050 45.455 37.74 12.35 0.00 1.78
2462 2689 2.290387 TGTTTTGGTAGCCGGCTTCATA 60.290 45.455 37.74 23.71 0.00 2.15
2463 2690 1.173913 GTTTTGGTAGCCGGCTTCAT 58.826 50.000 37.74 13.72 0.00 2.57
2464 2691 0.179015 TGTTTTGGTAGCCGGCTTCA 60.179 50.000 37.74 28.89 0.00 3.02
2465 2692 0.240145 GTGTTTTGGTAGCCGGCTTC 59.760 55.000 37.74 30.15 0.00 3.86
2466 2693 0.466555 TGTGTTTTGGTAGCCGGCTT 60.467 50.000 37.74 19.11 0.00 4.35
2467 2694 0.466555 TTGTGTTTTGGTAGCCGGCT 60.467 50.000 34.85 34.85 0.00 5.52
2468 2695 0.318360 GTTGTGTTTTGGTAGCCGGC 60.318 55.000 21.89 21.89 0.00 6.13
2469 2696 1.314730 AGTTGTGTTTTGGTAGCCGG 58.685 50.000 0.00 0.00 0.00 6.13
2470 2697 2.873472 TGTAGTTGTGTTTTGGTAGCCG 59.127 45.455 0.00 0.00 0.00 5.52
2471 2698 4.904253 TTGTAGTTGTGTTTTGGTAGCC 57.096 40.909 0.00 0.00 0.00 3.93
2472 2699 5.886992 AGTTTGTAGTTGTGTTTTGGTAGC 58.113 37.500 0.00 0.00 0.00 3.58
2473 2700 7.012044 AGCTAGTTTGTAGTTGTGTTTTGGTAG 59.988 37.037 0.00 0.00 0.00 3.18
2474 2701 6.824704 AGCTAGTTTGTAGTTGTGTTTTGGTA 59.175 34.615 0.00 0.00 0.00 3.25
2475 2702 5.650703 AGCTAGTTTGTAGTTGTGTTTTGGT 59.349 36.000 0.00 0.00 0.00 3.67
2476 2703 6.038271 AGAGCTAGTTTGTAGTTGTGTTTTGG 59.962 38.462 0.00 0.00 0.00 3.28
2477 2704 6.907212 CAGAGCTAGTTTGTAGTTGTGTTTTG 59.093 38.462 0.00 0.00 0.00 2.44
2478 2705 6.458342 GCAGAGCTAGTTTGTAGTTGTGTTTT 60.458 38.462 0.00 0.00 0.00 2.43
2479 2706 5.007724 GCAGAGCTAGTTTGTAGTTGTGTTT 59.992 40.000 0.00 0.00 0.00 2.83
2480 2707 4.511826 GCAGAGCTAGTTTGTAGTTGTGTT 59.488 41.667 0.00 0.00 0.00 3.32
2481 2708 4.058817 GCAGAGCTAGTTTGTAGTTGTGT 58.941 43.478 0.00 0.00 0.00 3.72
2482 2709 3.433615 GGCAGAGCTAGTTTGTAGTTGTG 59.566 47.826 0.00 0.00 0.00 3.33
2483 2710 3.557264 GGGCAGAGCTAGTTTGTAGTTGT 60.557 47.826 0.00 0.00 0.00 3.32
2484 2711 3.003480 GGGCAGAGCTAGTTTGTAGTTG 58.997 50.000 0.00 0.00 0.00 3.16
2485 2712 2.637872 TGGGCAGAGCTAGTTTGTAGTT 59.362 45.455 0.00 0.00 0.00 2.24
2486 2713 2.257207 TGGGCAGAGCTAGTTTGTAGT 58.743 47.619 0.00 0.00 0.00 2.73
2487 2714 3.334583 TTGGGCAGAGCTAGTTTGTAG 57.665 47.619 0.00 0.00 0.00 2.74
2488 2715 3.072476 ACTTTGGGCAGAGCTAGTTTGTA 59.928 43.478 0.00 0.00 0.00 2.41
2489 2716 2.158608 ACTTTGGGCAGAGCTAGTTTGT 60.159 45.455 0.00 0.00 0.00 2.83
2490 2717 2.485814 GACTTTGGGCAGAGCTAGTTTG 59.514 50.000 0.00 0.00 0.00 2.93
2491 2718 2.784347 GACTTTGGGCAGAGCTAGTTT 58.216 47.619 0.00 0.00 0.00 2.66
2492 2719 1.338200 CGACTTTGGGCAGAGCTAGTT 60.338 52.381 0.00 0.00 0.00 2.24
2493 2720 0.247736 CGACTTTGGGCAGAGCTAGT 59.752 55.000 0.00 0.00 0.00 2.57
2494 2721 1.086634 GCGACTTTGGGCAGAGCTAG 61.087 60.000 0.00 0.00 0.00 3.42
2495 2722 1.079127 GCGACTTTGGGCAGAGCTA 60.079 57.895 0.00 0.00 0.00 3.32
2496 2723 2.359230 GCGACTTTGGGCAGAGCT 60.359 61.111 0.00 0.00 0.00 4.09
2497 2724 3.435186 GGCGACTTTGGGCAGAGC 61.435 66.667 0.00 0.00 0.00 4.09
2498 2725 2.032528 TGGCGACTTTGGGCAGAG 59.967 61.111 0.00 0.00 34.77 3.35
2501 2728 3.866379 ATGCTGGCGACTTTGGGCA 62.866 57.895 0.00 0.00 38.36 5.36
2502 2729 1.312371 TAATGCTGGCGACTTTGGGC 61.312 55.000 0.00 0.00 0.00 5.36
2503 2730 0.451783 GTAATGCTGGCGACTTTGGG 59.548 55.000 0.00 0.00 0.00 4.12
2504 2731 0.451783 GGTAATGCTGGCGACTTTGG 59.548 55.000 0.00 0.00 0.00 3.28
2505 2732 1.398390 GAGGTAATGCTGGCGACTTTG 59.602 52.381 0.00 0.00 0.00 2.77
2506 2733 1.003118 TGAGGTAATGCTGGCGACTTT 59.997 47.619 0.00 0.00 0.00 2.66
2507 2734 0.613260 TGAGGTAATGCTGGCGACTT 59.387 50.000 0.00 0.00 0.00 3.01
2508 2735 0.108138 GTGAGGTAATGCTGGCGACT 60.108 55.000 0.00 0.00 0.00 4.18
2509 2736 0.391130 TGTGAGGTAATGCTGGCGAC 60.391 55.000 0.00 0.00 0.00 5.19
2510 2737 0.323302 TTGTGAGGTAATGCTGGCGA 59.677 50.000 0.00 0.00 0.00 5.54
2511 2738 0.729116 CTTGTGAGGTAATGCTGGCG 59.271 55.000 0.00 0.00 0.00 5.69
2512 2739 2.113860 TCTTGTGAGGTAATGCTGGC 57.886 50.000 0.00 0.00 0.00 4.85
2513 2740 2.421424 GCTTCTTGTGAGGTAATGCTGG 59.579 50.000 0.00 0.00 0.00 4.85
2514 2741 3.076621 TGCTTCTTGTGAGGTAATGCTG 58.923 45.455 0.00 0.00 0.00 4.41
2515 2742 3.008375 TCTGCTTCTTGTGAGGTAATGCT 59.992 43.478 0.00 0.00 0.00 3.79
2516 2743 3.338249 TCTGCTTCTTGTGAGGTAATGC 58.662 45.455 0.00 0.00 0.00 3.56
2517 2744 4.573900 ACTCTGCTTCTTGTGAGGTAATG 58.426 43.478 0.00 0.00 0.00 1.90
2518 2745 4.899352 ACTCTGCTTCTTGTGAGGTAAT 57.101 40.909 0.00 0.00 0.00 1.89
2519 2746 5.801531 TTACTCTGCTTCTTGTGAGGTAA 57.198 39.130 0.00 0.00 0.00 2.85
2520 2747 5.069914 TGTTTACTCTGCTTCTTGTGAGGTA 59.930 40.000 0.00 0.00 0.00 3.08
2521 2748 4.141711 TGTTTACTCTGCTTCTTGTGAGGT 60.142 41.667 0.00 0.00 0.00 3.85
2522 2749 4.380531 TGTTTACTCTGCTTCTTGTGAGG 58.619 43.478 0.00 0.00 0.00 3.86
2523 2750 5.121454 GGATGTTTACTCTGCTTCTTGTGAG 59.879 44.000 0.00 0.00 0.00 3.51
2524 2751 4.997395 GGATGTTTACTCTGCTTCTTGTGA 59.003 41.667 0.00 0.00 0.00 3.58
2525 2752 4.756642 TGGATGTTTACTCTGCTTCTTGTG 59.243 41.667 0.00 0.00 0.00 3.33
2526 2753 4.757149 GTGGATGTTTACTCTGCTTCTTGT 59.243 41.667 0.00 0.00 0.00 3.16
2527 2754 4.756642 TGTGGATGTTTACTCTGCTTCTTG 59.243 41.667 0.00 0.00 0.00 3.02
2528 2755 4.973168 TGTGGATGTTTACTCTGCTTCTT 58.027 39.130 0.00 0.00 0.00 2.52
2529 2756 4.623932 TGTGGATGTTTACTCTGCTTCT 57.376 40.909 0.00 0.00 0.00 2.85
2530 2757 4.033358 CGATGTGGATGTTTACTCTGCTTC 59.967 45.833 0.00 0.00 0.00 3.86
2531 2758 3.935203 CGATGTGGATGTTTACTCTGCTT 59.065 43.478 0.00 0.00 0.00 3.91
2532 2759 3.055819 ACGATGTGGATGTTTACTCTGCT 60.056 43.478 0.00 0.00 0.00 4.24
2533 2760 3.262420 ACGATGTGGATGTTTACTCTGC 58.738 45.455 0.00 0.00 0.00 4.26
2534 2761 4.093408 CCAACGATGTGGATGTTTACTCTG 59.907 45.833 0.00 0.00 41.65 3.35
2535 2762 4.020573 TCCAACGATGTGGATGTTTACTCT 60.021 41.667 3.60 0.00 42.97 3.24
2536 2763 4.250464 TCCAACGATGTGGATGTTTACTC 58.750 43.478 3.60 0.00 42.97 2.59
2537 2764 4.280436 TCCAACGATGTGGATGTTTACT 57.720 40.909 3.60 0.00 42.97 2.24
2552 2779 3.855950 GGTCTATAAGTGTTCGTCCAACG 59.144 47.826 0.00 0.00 44.19 4.10
2553 2780 3.855950 CGGTCTATAAGTGTTCGTCCAAC 59.144 47.826 0.00 0.00 35.28 3.77
2554 2781 3.674138 GCGGTCTATAAGTGTTCGTCCAA 60.674 47.826 0.00 0.00 0.00 3.53
2555 2782 2.159338 GCGGTCTATAAGTGTTCGTCCA 60.159 50.000 0.00 0.00 0.00 4.02
2556 2783 2.457970 GCGGTCTATAAGTGTTCGTCC 58.542 52.381 0.00 0.00 0.00 4.79
2557 2784 2.107178 CGCGGTCTATAAGTGTTCGTC 58.893 52.381 0.00 0.00 0.00 4.20
2558 2785 1.739466 TCGCGGTCTATAAGTGTTCGT 59.261 47.619 6.13 0.00 0.00 3.85
2559 2786 2.463553 TCGCGGTCTATAAGTGTTCG 57.536 50.000 6.13 0.00 0.00 3.95
2560 2787 3.703420 ACATCGCGGTCTATAAGTGTTC 58.297 45.455 6.13 0.00 0.00 3.18
2561 2788 3.703420 GACATCGCGGTCTATAAGTGTT 58.297 45.455 6.13 0.00 34.92 3.32
2562 2789 2.286831 CGACATCGCGGTCTATAAGTGT 60.287 50.000 6.13 0.00 35.63 3.55
2563 2790 2.286831 ACGACATCGCGGTCTATAAGTG 60.287 50.000 6.13 0.00 44.43 3.16
2564 2791 1.945394 ACGACATCGCGGTCTATAAGT 59.055 47.619 6.13 0.00 44.43 2.24
2565 2792 2.307929 CACGACATCGCGGTCTATAAG 58.692 52.381 6.13 0.00 44.43 1.73
2566 2793 1.598676 GCACGACATCGCGGTCTATAA 60.599 52.381 6.13 0.00 44.43 0.98
2567 2794 0.040692 GCACGACATCGCGGTCTATA 60.041 55.000 6.13 0.00 44.43 1.31
2568 2795 1.299165 GCACGACATCGCGGTCTAT 60.299 57.895 6.13 0.00 44.43 1.98
2569 2796 2.101575 GCACGACATCGCGGTCTA 59.898 61.111 6.13 0.00 44.43 2.59
2570 2797 4.050934 TGCACGACATCGCGGTCT 62.051 61.111 6.13 0.00 44.43 3.85
2571 2798 3.838795 GTGCACGACATCGCGGTC 61.839 66.667 6.13 5.77 44.43 4.79
2572 2799 3.932580 ATGTGCACGACATCGCGGT 62.933 57.895 13.13 0.00 41.91 5.68
2573 2800 3.188100 ATGTGCACGACATCGCGG 61.188 61.111 13.13 0.00 41.91 6.46
2579 2806 0.389296 CGGGTTAGATGTGCACGACA 60.389 55.000 13.13 0.00 39.53 4.35
2580 2807 0.389426 ACGGGTTAGATGTGCACGAC 60.389 55.000 13.13 8.65 0.00 4.34
2581 2808 0.108992 GACGGGTTAGATGTGCACGA 60.109 55.000 13.13 1.58 0.00 4.35
2582 2809 1.410737 CGACGGGTTAGATGTGCACG 61.411 60.000 13.13 0.00 0.00 5.34
2583 2810 0.108992 TCGACGGGTTAGATGTGCAC 60.109 55.000 10.75 10.75 0.00 4.57
2584 2811 0.604073 TTCGACGGGTTAGATGTGCA 59.396 50.000 0.00 0.00 0.00 4.57
2585 2812 1.659098 CTTTCGACGGGTTAGATGTGC 59.341 52.381 0.00 0.00 0.00 4.57
2586 2813 1.659098 GCTTTCGACGGGTTAGATGTG 59.341 52.381 0.00 0.00 0.00 3.21
2587 2814 1.274167 TGCTTTCGACGGGTTAGATGT 59.726 47.619 0.00 0.00 0.00 3.06
2588 2815 1.659098 GTGCTTTCGACGGGTTAGATG 59.341 52.381 0.00 0.00 0.00 2.90
2589 2816 1.274167 TGTGCTTTCGACGGGTTAGAT 59.726 47.619 0.00 0.00 0.00 1.98
2590 2817 0.675083 TGTGCTTTCGACGGGTTAGA 59.325 50.000 0.00 0.00 0.00 2.10
2591 2818 1.193874 GTTGTGCTTTCGACGGGTTAG 59.806 52.381 0.00 0.00 0.00 2.34
2592 2819 1.219646 GTTGTGCTTTCGACGGGTTA 58.780 50.000 0.00 0.00 0.00 2.85
2593 2820 1.441732 GGTTGTGCTTTCGACGGGTT 61.442 55.000 0.00 0.00 0.00 4.11
2594 2821 1.890510 GGTTGTGCTTTCGACGGGT 60.891 57.895 0.00 0.00 0.00 5.28
2595 2822 2.943653 GGTTGTGCTTTCGACGGG 59.056 61.111 0.00 0.00 0.00 5.28
2596 2823 2.549282 CGGTTGTGCTTTCGACGG 59.451 61.111 0.00 0.00 0.00 4.79
2597 2824 2.549282 CCGGTTGTGCTTTCGACG 59.451 61.111 0.00 0.00 0.00 5.12
2598 2825 2.613506 CCCCGGTTGTGCTTTCGAC 61.614 63.158 0.00 0.00 0.00 4.20
2599 2826 2.281208 CCCCGGTTGTGCTTTCGA 60.281 61.111 0.00 0.00 0.00 3.71
2600 2827 4.038080 GCCCCGGTTGTGCTTTCG 62.038 66.667 0.00 0.00 0.00 3.46
2601 2828 3.680786 GGCCCCGGTTGTGCTTTC 61.681 66.667 0.00 0.00 0.00 2.62
2602 2829 4.531426 TGGCCCCGGTTGTGCTTT 62.531 61.111 0.00 0.00 0.00 3.51
2603 2830 4.531426 TTGGCCCCGGTTGTGCTT 62.531 61.111 0.00 0.00 0.00 3.91
2604 2831 4.974721 CTTGGCCCCGGTTGTGCT 62.975 66.667 0.00 0.00 0.00 4.40
2606 2833 4.278513 TCCTTGGCCCCGGTTGTG 62.279 66.667 0.00 0.00 0.00 3.33
2607 2834 4.280019 GTCCTTGGCCCCGGTTGT 62.280 66.667 0.00 0.00 0.00 3.32
2608 2835 3.920093 GAGTCCTTGGCCCCGGTTG 62.920 68.421 0.00 0.00 0.00 3.77
2609 2836 3.647771 GAGTCCTTGGCCCCGGTT 61.648 66.667 0.00 0.00 0.00 4.44
2612 2839 2.706952 TTTTGGAGTCCTTGGCCCCG 62.707 60.000 11.33 0.00 0.00 5.73
2613 2840 1.155155 TTTTGGAGTCCTTGGCCCC 59.845 57.895 11.33 0.00 0.00 5.80
2614 2841 1.524008 CGTTTTGGAGTCCTTGGCCC 61.524 60.000 11.33 0.00 0.00 5.80
2615 2842 1.524008 CCGTTTTGGAGTCCTTGGCC 61.524 60.000 11.33 0.00 42.00 5.36
2616 2843 0.536460 TCCGTTTTGGAGTCCTTGGC 60.536 55.000 11.33 0.00 43.74 4.52
2617 2844 3.717842 TCCGTTTTGGAGTCCTTGG 57.282 52.632 11.33 5.16 43.74 3.61
2637 2864 1.475213 GGCCGTATTCCCTCTTCAAGG 60.475 57.143 0.00 0.00 45.77 3.61
2638 2865 1.209504 TGGCCGTATTCCCTCTTCAAG 59.790 52.381 0.00 0.00 0.00 3.02
2639 2866 1.065709 GTGGCCGTATTCCCTCTTCAA 60.066 52.381 0.00 0.00 0.00 2.69
2640 2867 0.539986 GTGGCCGTATTCCCTCTTCA 59.460 55.000 0.00 0.00 0.00 3.02
2641 2868 0.831307 AGTGGCCGTATTCCCTCTTC 59.169 55.000 0.00 0.00 0.00 2.87
2642 2869 2.170012 TAGTGGCCGTATTCCCTCTT 57.830 50.000 0.00 0.00 0.00 2.85
2643 2870 2.170012 TTAGTGGCCGTATTCCCTCT 57.830 50.000 0.00 0.00 0.00 3.69
2644 2871 2.994186 TTTAGTGGCCGTATTCCCTC 57.006 50.000 0.00 0.00 0.00 4.30
2645 2872 3.617284 CTTTTTAGTGGCCGTATTCCCT 58.383 45.455 0.00 0.00 0.00 4.20
2646 2873 2.686405 CCTTTTTAGTGGCCGTATTCCC 59.314 50.000 0.00 0.00 0.00 3.97
2647 2874 2.686405 CCCTTTTTAGTGGCCGTATTCC 59.314 50.000 0.00 0.00 0.00 3.01
2648 2875 2.098607 GCCCTTTTTAGTGGCCGTATTC 59.901 50.000 0.00 0.00 39.30 1.75
2649 2876 2.097036 GCCCTTTTTAGTGGCCGTATT 58.903 47.619 0.00 0.00 39.30 1.89
2650 2877 1.004979 TGCCCTTTTTAGTGGCCGTAT 59.995 47.619 0.00 0.00 44.72 3.06
2651 2878 0.400975 TGCCCTTTTTAGTGGCCGTA 59.599 50.000 0.00 0.00 44.72 4.02
2652 2879 0.468400 TTGCCCTTTTTAGTGGCCGT 60.468 50.000 0.00 0.00 44.72 5.68
2653 2880 0.676736 TTTGCCCTTTTTAGTGGCCG 59.323 50.000 0.00 0.00 44.72 6.13
2654 2881 2.920724 TTTTGCCCTTTTTAGTGGCC 57.079 45.000 0.00 0.00 44.72 5.36
2655 2882 4.641396 AGATTTTTGCCCTTTTTAGTGGC 58.359 39.130 0.00 0.00 45.56 5.01
2656 2883 9.586435 CTTATAGATTTTTGCCCTTTTTAGTGG 57.414 33.333 0.00 0.00 0.00 4.00
2660 2887 9.921637 CACACTTATAGATTTTTGCCCTTTTTA 57.078 29.630 0.00 0.00 0.00 1.52
2661 2888 7.387673 GCACACTTATAGATTTTTGCCCTTTTT 59.612 33.333 0.00 0.00 0.00 1.94
2662 2889 6.873605 GCACACTTATAGATTTTTGCCCTTTT 59.126 34.615 0.00 0.00 0.00 2.27
2663 2890 6.014669 TGCACACTTATAGATTTTTGCCCTTT 60.015 34.615 0.00 0.00 0.00 3.11
2664 2891 5.480073 TGCACACTTATAGATTTTTGCCCTT 59.520 36.000 0.00 0.00 0.00 3.95
2665 2892 5.016173 TGCACACTTATAGATTTTTGCCCT 58.984 37.500 0.00 0.00 0.00 5.19
2666 2893 5.323371 TGCACACTTATAGATTTTTGCCC 57.677 39.130 0.00 0.00 0.00 5.36
2667 2894 6.183359 CGTTTGCACACTTATAGATTTTTGCC 60.183 38.462 0.87 0.00 0.00 4.52
2668 2895 6.580791 TCGTTTGCACACTTATAGATTTTTGC 59.419 34.615 0.87 0.00 0.00 3.68
2669 2896 7.201266 GCTCGTTTGCACACTTATAGATTTTTG 60.201 37.037 0.87 0.00 0.00 2.44
2670 2897 6.801862 GCTCGTTTGCACACTTATAGATTTTT 59.198 34.615 0.87 0.00 0.00 1.94
2671 2898 6.149474 AGCTCGTTTGCACACTTATAGATTTT 59.851 34.615 0.87 0.00 34.99 1.82
2672 2899 5.643777 AGCTCGTTTGCACACTTATAGATTT 59.356 36.000 0.87 0.00 34.99 2.17
2673 2900 5.178797 AGCTCGTTTGCACACTTATAGATT 58.821 37.500 0.87 0.00 34.99 2.40
2674 2901 4.759782 AGCTCGTTTGCACACTTATAGAT 58.240 39.130 0.87 0.00 34.99 1.98
2675 2902 4.174009 GAGCTCGTTTGCACACTTATAGA 58.826 43.478 0.00 0.00 34.99 1.98
2676 2903 3.000674 CGAGCTCGTTTGCACACTTATAG 60.001 47.826 27.79 0.00 34.99 1.31
2677 2904 2.921121 CGAGCTCGTTTGCACACTTATA 59.079 45.455 27.79 0.00 34.99 0.98
2678 2905 1.726791 CGAGCTCGTTTGCACACTTAT 59.273 47.619 27.79 0.00 34.99 1.73
2679 2906 1.136690 CGAGCTCGTTTGCACACTTA 58.863 50.000 27.79 0.00 34.99 2.24
2680 2907 0.529773 TCGAGCTCGTTTGCACACTT 60.530 50.000 33.33 0.00 40.80 3.16
2681 2908 0.529773 TTCGAGCTCGTTTGCACACT 60.530 50.000 33.33 0.00 40.80 3.55
2682 2909 0.303493 TTTCGAGCTCGTTTGCACAC 59.697 50.000 33.33 0.00 40.80 3.82
2683 2910 0.303493 GTTTCGAGCTCGTTTGCACA 59.697 50.000 33.33 11.70 40.80 4.57
2684 2911 0.582005 AGTTTCGAGCTCGTTTGCAC 59.418 50.000 33.33 22.08 40.80 4.57
2685 2912 0.581529 CAGTTTCGAGCTCGTTTGCA 59.418 50.000 33.33 13.27 40.80 4.08
2686 2913 0.110644 CCAGTTTCGAGCTCGTTTGC 60.111 55.000 33.33 21.36 40.80 3.68
2687 2914 1.497991 TCCAGTTTCGAGCTCGTTTG 58.502 50.000 33.33 24.30 40.80 2.93
2688 2915 2.069273 CATCCAGTTTCGAGCTCGTTT 58.931 47.619 33.33 15.78 40.80 3.60
2689 2916 1.272490 TCATCCAGTTTCGAGCTCGTT 59.728 47.619 33.33 16.12 40.80 3.85
2690 2917 0.888619 TCATCCAGTTTCGAGCTCGT 59.111 50.000 33.33 13.67 40.80 4.18
2691 2918 1.996292 TTCATCCAGTTTCGAGCTCG 58.004 50.000 30.03 30.03 41.45 5.03
2692 2919 3.330267 AGTTTCATCCAGTTTCGAGCTC 58.670 45.455 2.73 2.73 0.00 4.09
2693 2920 3.409026 AGTTTCATCCAGTTTCGAGCT 57.591 42.857 0.00 0.00 0.00 4.09
2694 2921 3.365364 CCAAGTTTCATCCAGTTTCGAGC 60.365 47.826 0.00 0.00 0.00 5.03
2695 2922 4.065088 TCCAAGTTTCATCCAGTTTCGAG 58.935 43.478 0.00 0.00 0.00 4.04
2696 2923 4.079980 TCCAAGTTTCATCCAGTTTCGA 57.920 40.909 0.00 0.00 0.00 3.71
2697 2924 4.537015 GTTCCAAGTTTCATCCAGTTTCG 58.463 43.478 0.00 0.00 0.00 3.46
2698 2925 4.537015 CGTTCCAAGTTTCATCCAGTTTC 58.463 43.478 0.00 0.00 0.00 2.78
2699 2926 3.317993 CCGTTCCAAGTTTCATCCAGTTT 59.682 43.478 0.00 0.00 0.00 2.66
2700 2927 2.884639 CCGTTCCAAGTTTCATCCAGTT 59.115 45.455 0.00 0.00 0.00 3.16
2701 2928 2.158667 ACCGTTCCAAGTTTCATCCAGT 60.159 45.455 0.00 0.00 0.00 4.00
2702 2929 2.226437 CACCGTTCCAAGTTTCATCCAG 59.774 50.000 0.00 0.00 0.00 3.86
2703 2930 2.226330 CACCGTTCCAAGTTTCATCCA 58.774 47.619 0.00 0.00 0.00 3.41
2704 2931 2.225727 GACACCGTTCCAAGTTTCATCC 59.774 50.000 0.00 0.00 0.00 3.51
2705 2932 3.139077 AGACACCGTTCCAAGTTTCATC 58.861 45.455 0.00 0.00 0.00 2.92
2706 2933 3.208747 AGACACCGTTCCAAGTTTCAT 57.791 42.857 0.00 0.00 0.00 2.57
2707 2934 2.702592 AGACACCGTTCCAAGTTTCA 57.297 45.000 0.00 0.00 0.00 2.69
2708 2935 2.940410 TGAAGACACCGTTCCAAGTTTC 59.060 45.455 0.00 0.00 0.00 2.78
2709 2936 2.993937 TGAAGACACCGTTCCAAGTTT 58.006 42.857 0.00 0.00 0.00 2.66
2710 2937 2.702592 TGAAGACACCGTTCCAAGTT 57.297 45.000 0.00 0.00 0.00 2.66
2711 2938 2.930826 ATGAAGACACCGTTCCAAGT 57.069 45.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.