Multiple sequence alignment - TraesCS2D01G185600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G185600 chr2D 100.000 4597 0 0 1 4597 130819926 130824522 0.000000e+00 8490.0
1 TraesCS2D01G185600 chr2D 90.503 179 17 0 1196 1374 125733711 125733533 2.140000e-58 237.0
2 TraesCS2D01G185600 chr2D 89.730 185 19 0 1189 1373 130758493 130758677 2.140000e-58 237.0
3 TraesCS2D01G185600 chr2D 93.407 91 4 2 4507 4597 56430573 56430485 2.890000e-27 134.0
4 TraesCS2D01G185600 chr2D 87.805 82 10 0 997 1078 130758278 130758359 3.790000e-16 97.1
5 TraesCS2D01G185600 chr2D 93.651 63 3 1 1531 1593 582301426 582301487 4.900000e-15 93.5
6 TraesCS2D01G185600 chr2A 87.470 1652 93 48 2289 3900 136930122 136931699 0.000000e+00 1799.0
7 TraesCS2D01G185600 chr2A 89.749 517 32 12 619 1127 136928185 136928688 3.880000e-180 641.0
8 TraesCS2D01G185600 chr2A 93.351 376 20 4 1166 1537 136928773 136929147 6.720000e-153 551.0
9 TraesCS2D01G185600 chr2A 86.609 463 53 7 4061 4520 136931704 136932160 1.910000e-138 503.0
10 TraesCS2D01G185600 chr2A 83.657 361 28 11 1934 2290 136929752 136930085 1.240000e-80 311.0
11 TraesCS2D01G185600 chr2A 92.308 182 14 0 1196 1377 132259893 132259712 4.560000e-65 259.0
12 TraesCS2D01G185600 chr2A 91.892 185 15 0 1189 1373 136639609 136639425 4.560000e-65 259.0
13 TraesCS2D01G185600 chr2A 87.222 180 23 0 1194 1373 136736598 136736777 6.030000e-49 206.0
14 TraesCS2D01G185600 chr2A 82.648 219 38 0 2673 2891 136747203 136747421 1.310000e-45 195.0
15 TraesCS2D01G185600 chr2A 95.349 86 3 1 4513 4597 564587280 564587195 8.020000e-28 135.0
16 TraesCS2D01G185600 chr2A 84.247 146 13 6 1594 1739 136929155 136929290 2.890000e-27 134.0
17 TraesCS2D01G185600 chr2A 86.170 94 9 3 997 1088 136734313 136734404 1.050000e-16 99.0
18 TraesCS2D01G185600 chr2A 85.870 92 9 3 997 1086 136639824 136639735 1.360000e-15 95.3
19 TraesCS2D01G185600 chr2A 78.788 132 21 6 2347 2475 33655429 33655556 1.060000e-11 82.4
20 TraesCS2D01G185600 chr2A 91.525 59 4 1 1535 1593 240480256 240480313 3.810000e-11 80.5
21 TraesCS2D01G185600 chr2A 93.878 49 2 1 1544 1592 753778257 753778210 6.380000e-09 73.1
22 TraesCS2D01G185600 chr2B 90.709 1227 61 24 2631 3824 184369275 184370481 0.000000e+00 1585.0
23 TraesCS2D01G185600 chr2B 88.694 1026 86 15 1591 2602 184367051 184368060 0.000000e+00 1225.0
24 TraesCS2D01G185600 chr2B 88.515 862 64 24 619 1468 184365572 184366410 0.000000e+00 1011.0
25 TraesCS2D01G185600 chr2B 88.153 498 45 6 1 488 105670796 105670303 8.570000e-162 580.0
26 TraesCS2D01G185600 chr2B 83.636 275 38 7 4044 4311 725814679 725814953 7.630000e-63 252.0
27 TraesCS2D01G185600 chr2B 91.061 179 16 0 1196 1374 179139314 179139136 4.600000e-60 243.0
28 TraesCS2D01G185600 chr2B 89.730 185 19 0 1189 1373 184326635 184326819 2.140000e-58 237.0
29 TraesCS2D01G185600 chr2B 82.692 208 32 3 2673 2878 184327761 184327966 1.020000e-41 182.0
30 TraesCS2D01G185600 chr2B 88.172 93 10 1 507 598 184365493 184365585 4.860000e-20 110.0
31 TraesCS2D01G185600 chr2B 91.304 69 3 3 1524 1592 761990783 761990718 1.760000e-14 91.6
32 TraesCS2D01G185600 chr2B 77.215 158 25 10 2323 2475 51882145 51882296 1.060000e-11 82.4
33 TraesCS2D01G185600 chr2B 88.889 63 5 2 1477 1537 184366991 184367053 4.930000e-10 76.8
34 TraesCS2D01G185600 chr5D 87.403 516 57 3 2 509 35674578 35675093 1.840000e-163 586.0
35 TraesCS2D01G185600 chr5D 87.160 514 51 5 1 506 35802037 35802543 1.860000e-158 569.0
36 TraesCS2D01G185600 chr5D 83.480 454 62 11 66 509 340530287 340529837 1.190000e-110 411.0
37 TraesCS2D01G185600 chr5D 87.421 318 35 1 197 509 32248885 32249202 1.220000e-95 361.0
38 TraesCS2D01G185600 chr5D 87.273 55 4 3 1516 1567 395933856 395933910 4.970000e-05 60.2
39 TraesCS2D01G185600 chr5D 97.222 36 0 1 1566 1601 548003537 548003503 4.970000e-05 60.2
40 TraesCS2D01G185600 chr5D 88.000 50 1 5 1566 1614 488862877 488862832 2.000000e-03 54.7
41 TraesCS2D01G185600 chr7D 86.267 517 57 7 1 509 401079403 401078893 2.420000e-152 549.0
42 TraesCS2D01G185600 chr7D 84.540 511 56 12 1 497 566211391 566211892 6.910000e-133 484.0
43 TraesCS2D01G185600 chr7D 86.434 258 32 2 3 257 166209490 166209747 3.500000e-71 279.0
44 TraesCS2D01G185600 chr7D 88.000 75 5 3 1523 1595 416957691 416957619 8.190000e-13 86.1
45 TraesCS2D01G185600 chr7D 89.655 58 5 1 1535 1592 53712336 53712392 6.380000e-09 73.1
46 TraesCS2D01G185600 chr7D 86.567 67 2 1 1540 1599 139819063 139818997 2.970000e-07 67.6
47 TraesCS2D01G185600 chr7D 95.238 42 1 1 1535 1576 159908782 159908742 1.070000e-06 65.8
48 TraesCS2D01G185600 chr7A 86.160 513 59 9 5 508 38029724 38029215 1.120000e-150 544.0
49 TraesCS2D01G185600 chr7A 85.435 460 59 3 58 509 458918527 458918068 5.380000e-129 472.0
50 TraesCS2D01G185600 chr5A 85.880 517 65 3 1 509 475591882 475591366 1.120000e-150 544.0
51 TraesCS2D01G185600 chr5A 85.328 518 58 10 1 509 24352224 24352732 1.900000e-143 520.0
52 TraesCS2D01G185600 chr5A 81.288 652 79 32 2973 3606 706333672 706334298 5.350000e-134 488.0
53 TraesCS2D01G185600 chr5A 82.185 421 46 20 980 1372 706331803 706332222 7.370000e-88 335.0
54 TraesCS2D01G185600 chr5A 92.063 63 5 0 1530 1592 35803792 35803854 6.330000e-14 89.8
55 TraesCS2D01G185600 chr5A 97.143 35 1 0 3655 3689 706334346 706334380 4.970000e-05 60.2
56 TraesCS2D01G185600 chr6B 85.595 479 60 4 1 470 471359553 471359075 1.150000e-135 494.0
57 TraesCS2D01G185600 chr6B 83.630 281 37 8 4039 4311 681223967 681224246 5.900000e-64 255.0
58 TraesCS2D01G185600 chr6B 86.301 73 1 3 1535 1600 594860785 594860715 2.290000e-08 71.3
59 TraesCS2D01G185600 chr1B 84.170 518 72 6 1 509 25220904 25221420 1.150000e-135 494.0
60 TraesCS2D01G185600 chr1B 83.430 519 74 8 1 509 25249823 25250339 5.380000e-129 472.0
61 TraesCS2D01G185600 chr1D 84.988 433 43 5 1 425 52322637 52323055 1.980000e-113 420.0
62 TraesCS2D01G185600 chr1D 84.296 433 45 14 937 1365 412240707 412241120 7.160000e-108 401.0
63 TraesCS2D01G185600 chr1D 84.249 273 30 10 4045 4311 476747316 476747051 2.120000e-63 254.0
64 TraesCS2D01G185600 chr1D 93.548 93 4 2 4505 4597 70331809 70331719 2.230000e-28 137.0
65 TraesCS2D01G185600 chr1D 95.402 87 3 1 4512 4597 464955617 464955703 2.230000e-28 137.0
66 TraesCS2D01G185600 chr1D 84.722 72 4 3 1534 1598 251742228 251742157 1.070000e-06 65.8
67 TraesCS2D01G185600 chr1D 95.122 41 1 1 1531 1571 54972998 54972959 3.840000e-06 63.9
68 TraesCS2D01G185600 chr1D 93.023 43 1 2 1529 1571 355081220 355081180 1.380000e-05 62.1
69 TraesCS2D01G185600 chr1D 89.583 48 4 1 1520 1567 479730259 479730213 4.970000e-05 60.2
70 TraesCS2D01G185600 chr1D 100.000 31 0 0 1567 1597 90208005 90208035 1.790000e-04 58.4
71 TraesCS2D01G185600 chr1D 100.000 30 0 0 1566 1595 154019386 154019415 6.430000e-04 56.5
72 TraesCS2D01G185600 chr1D 94.444 36 2 0 1566 1601 415405116 415405151 6.430000e-04 56.5
73 TraesCS2D01G185600 chr1D 100.000 29 0 0 1567 1595 99458480 99458508 2.000000e-03 54.7
74 TraesCS2D01G185600 chr1D 92.308 39 1 2 1567 1603 355167750 355167712 2.000000e-03 54.7
75 TraesCS2D01G185600 chr7B 84.848 396 49 5 125 509 27477312 27477707 5.580000e-104 388.0
76 TraesCS2D01G185600 chr7B 82.292 288 42 8 4032 4311 583368897 583368611 1.650000e-59 241.0
77 TraesCS2D01G185600 chr7B 92.632 95 5 1 4505 4597 559173443 559173537 8.020000e-28 135.0
78 TraesCS2D01G185600 chr7B 88.000 75 5 3 1523 1595 432913576 432913504 8.190000e-13 86.1
79 TraesCS2D01G185600 chr7B 90.769 65 1 3 1531 1592 620460737 620460799 1.060000e-11 82.4
80 TraesCS2D01G185600 chr6A 79.737 533 77 16 1 505 100651160 100651689 1.570000e-94 357.0
81 TraesCS2D01G185600 chr6A 94.595 37 2 0 1563 1599 61584677 61584713 1.790000e-04 58.4
82 TraesCS2D01G185600 chr3D 84.364 275 32 9 4045 4311 557919824 557920095 4.560000e-65 259.0
83 TraesCS2D01G185600 chr3D 90.816 98 7 2 4501 4597 106684117 106684213 3.730000e-26 130.0
84 TraesCS2D01G185600 chr3B 83.942 274 34 9 4046 4311 60415218 60415489 2.120000e-63 254.0
85 TraesCS2D01G185600 chr3B 83.154 279 38 9 4040 4311 16081797 16081521 3.550000e-61 246.0
86 TraesCS2D01G185600 chr4A 83.456 272 39 6 4045 4311 648750382 648750652 9.880000e-62 248.0
87 TraesCS2D01G185600 chr5B 97.561 82 2 0 4516 4597 351497409 351497490 1.720000e-29 141.0
88 TraesCS2D01G185600 chr5B 87.692 65 5 3 1531 1593 124768162 124768099 6.380000e-09 73.1
89 TraesCS2D01G185600 chr4B 95.349 86 3 1 4512 4597 122866232 122866316 8.020000e-28 135.0
90 TraesCS2D01G185600 chr6D 87.500 112 11 3 4488 4597 98201818 98201928 4.830000e-25 126.0
91 TraesCS2D01G185600 chr6D 93.220 59 4 0 1535 1593 3455574 3455632 2.280000e-13 87.9
92 TraesCS2D01G185600 chr6D 90.769 65 6 0 1534 1598 52335438 52335502 2.280000e-13 87.9
93 TraesCS2D01G185600 chr6D 80.870 115 14 6 400 509 82905257 82905368 2.950000e-12 84.2
94 TraesCS2D01G185600 chr6D 89.231 65 2 2 1535 1598 309955865 309955925 4.930000e-10 76.8
95 TraesCS2D01G185600 chr6D 97.297 37 1 0 1531 1567 290627176 290627140 3.840000e-06 63.9
96 TraesCS2D01G185600 chr6D 89.583 48 3 1 1520 1567 296865620 296865665 4.970000e-05 60.2
97 TraesCS2D01G185600 chr6D 92.857 42 2 1 1530 1571 340997385 340997425 4.970000e-05 60.2
98 TraesCS2D01G185600 chr6D 97.059 34 1 0 1566 1599 95294963 95294996 1.790000e-04 58.4
99 TraesCS2D01G185600 chr6D 89.362 47 3 2 1531 1576 115771490 115771445 1.790000e-04 58.4
100 TraesCS2D01G185600 chr6D 96.970 33 1 0 1566 1598 363881685 363881653 6.430000e-04 56.5
101 TraesCS2D01G185600 chr6D 96.970 33 0 1 1566 1598 2885134 2885103 2.000000e-03 54.7
102 TraesCS2D01G185600 chr6D 94.286 35 2 0 1567 1601 186542443 186542477 2.000000e-03 54.7
103 TraesCS2D01G185600 chr4D 92.308 65 2 2 1533 1597 405770428 405770489 6.330000e-14 89.8
104 TraesCS2D01G185600 chr4D 95.000 40 2 0 1532 1571 352142605 352142566 3.840000e-06 63.9
105 TraesCS2D01G185600 chr4D 88.372 43 5 0 1566 1608 317189895 317189853 8.000000e-03 52.8
106 TraesCS2D01G185600 chrUn 90.196 51 4 1 1534 1584 17366090 17366041 1.070000e-06 65.8
107 TraesCS2D01G185600 chrUn 91.111 45 3 1 1533 1577 91676008 91675965 4.970000e-05 60.2
108 TraesCS2D01G185600 chrUn 97.143 35 1 0 1534 1568 241641869 241641903 4.970000e-05 60.2
109 TraesCS2D01G185600 chrUn 94.737 38 2 0 1534 1571 297914320 297914283 4.970000e-05 60.2
110 TraesCS2D01G185600 chrUn 94.872 39 1 1 1533 1571 441250197 441250234 4.970000e-05 60.2
111 TraesCS2D01G185600 chrUn 97.059 34 1 0 1534 1567 257127028 257127061 1.790000e-04 58.4
112 TraesCS2D01G185600 chrUn 97.059 34 1 0 1534 1567 266754791 266754824 1.790000e-04 58.4
113 TraesCS2D01G185600 chrUn 91.111 45 1 3 1523 1567 273925265 273925306 1.790000e-04 58.4
114 TraesCS2D01G185600 chrUn 96.970 33 1 0 1535 1567 65138839 65138871 6.430000e-04 56.5
115 TraesCS2D01G185600 chrUn 90.698 43 3 1 1535 1577 76787434 76787393 6.430000e-04 56.5
116 TraesCS2D01G185600 chrUn 94.595 37 1 1 1535 1571 208649054 208649089 6.430000e-04 56.5
117 TraesCS2D01G185600 chrUn 94.595 37 1 1 1535 1571 226179886 226179921 6.430000e-04 56.5
118 TraesCS2D01G185600 chrUn 94.286 35 2 0 1565 1599 36643959 36643993 2.000000e-03 54.7
119 TraesCS2D01G185600 chrUn 96.970 33 0 1 1566 1597 75308411 75308379 2.000000e-03 54.7
120 TraesCS2D01G185600 chrUn 96.970 33 0 1 1566 1597 242405269 242405301 2.000000e-03 54.7
121 TraesCS2D01G185600 chrUn 100.000 28 0 0 1566 1593 6371211 6371184 8.000000e-03 52.8
122 TraesCS2D01G185600 chrUn 96.774 31 1 0 1563 1593 12375944 12375974 8.000000e-03 52.8
123 TraesCS2D01G185600 chrUn 100.000 28 0 0 1566 1593 19962093 19962120 8.000000e-03 52.8
124 TraesCS2D01G185600 chrUn 100.000 28 0 0 1566 1593 26327478 26327451 8.000000e-03 52.8
125 TraesCS2D01G185600 chrUn 94.118 34 2 0 1566 1599 100547494 100547461 8.000000e-03 52.8
126 TraesCS2D01G185600 chrUn 96.774 31 1 0 1563 1593 110002960 110002990 8.000000e-03 52.8
127 TraesCS2D01G185600 chrUn 96.875 32 0 1 1566 1597 184676498 184676468 8.000000e-03 52.8
128 TraesCS2D01G185600 chrUn 96.875 32 0 1 1566 1597 270741530 270741500 8.000000e-03 52.8
129 TraesCS2D01G185600 chrUn 100.000 28 0 0 470 497 330704423 330704450 8.000000e-03 52.8
130 TraesCS2D01G185600 chrUn 100.000 28 0 0 1566 1593 414586755 414586782 8.000000e-03 52.8
131 TraesCS2D01G185600 chr1A 95.122 41 1 1 1531 1571 477053480 477053441 3.840000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G185600 chr2D 130819926 130824522 4596 False 8490.00 8490 100.000000 1 4597 1 chr2D.!!$F1 4596
1 TraesCS2D01G185600 chr2A 136928185 136932160 3975 False 656.50 1799 87.513833 619 4520 6 chr2A.!!$F5 3901
2 TraesCS2D01G185600 chr2B 184365493 184370481 4988 False 801.56 1585 88.995800 507 3824 5 chr2B.!!$F4 3317
3 TraesCS2D01G185600 chr2B 184326635 184327966 1331 False 209.50 237 86.211000 1189 2878 2 chr2B.!!$F3 1689
4 TraesCS2D01G185600 chr5D 35674578 35675093 515 False 586.00 586 87.403000 2 509 1 chr5D.!!$F2 507
5 TraesCS2D01G185600 chr5D 35802037 35802543 506 False 569.00 569 87.160000 1 506 1 chr5D.!!$F3 505
6 TraesCS2D01G185600 chr7D 401078893 401079403 510 True 549.00 549 86.267000 1 509 1 chr7D.!!$R3 508
7 TraesCS2D01G185600 chr7D 566211391 566211892 501 False 484.00 484 84.540000 1 497 1 chr7D.!!$F3 496
8 TraesCS2D01G185600 chr7A 38029215 38029724 509 True 544.00 544 86.160000 5 508 1 chr7A.!!$R1 503
9 TraesCS2D01G185600 chr5A 475591366 475591882 516 True 544.00 544 85.880000 1 509 1 chr5A.!!$R1 508
10 TraesCS2D01G185600 chr5A 24352224 24352732 508 False 520.00 520 85.328000 1 509 1 chr5A.!!$F1 508
11 TraesCS2D01G185600 chr5A 706331803 706334380 2577 False 294.40 488 86.872000 980 3689 3 chr5A.!!$F3 2709
12 TraesCS2D01G185600 chr1B 25220904 25221420 516 False 494.00 494 84.170000 1 509 1 chr1B.!!$F1 508
13 TraesCS2D01G185600 chr1B 25249823 25250339 516 False 472.00 472 83.430000 1 509 1 chr1B.!!$F2 508
14 TraesCS2D01G185600 chr6A 100651160 100651689 529 False 357.00 357 79.737000 1 505 1 chr6A.!!$F2 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
586 619 0.098200 CGCTGACACCATTGCTGATG 59.902 55.0 0.00 0.00 35.42 3.07 F
594 627 0.245266 CCATTGCTGATGTGCTTGCA 59.755 50.0 0.00 0.00 33.71 4.08 F
733 766 0.245539 GCTGGTGTGCCTCGTAGTAA 59.754 55.0 0.00 0.00 35.27 2.24 F
2025 3767 0.250234 CAATTCCTCCCACTCGCTGA 59.750 55.0 0.00 0.00 0.00 4.26 F
2189 3954 0.377203 GGACGTGATTGGAATTCCGC 59.623 55.0 19.57 11.74 39.43 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1574 2284 0.186873 GGTACTCCCTCCGTCCCATA 59.813 60.0 0.0 0.0 0.0 2.74 R
2025 3767 0.247736 GTCATCTGTCCGCCAAGAGT 59.752 55.0 0.0 0.0 0.0 3.24 R
2234 3999 0.323178 AATCTGGGGCAGCTTGAGTG 60.323 55.0 0.0 0.0 0.0 3.51 R
3509 6646 0.324943 ACTTGAACCCCAGATCCACG 59.675 55.0 0.0 0.0 0.0 4.94 R
3627 6787 0.872388 CCTGGGTTTCTTTTCGACGG 59.128 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 2.656002 CCTAGATCTCGTGGACTTCCA 58.344 52.381 0.00 0.00 45.30 3.53
135 137 0.318360 CGACACCGCCGCATATTCTA 60.318 55.000 0.00 0.00 0.00 2.10
175 182 2.932614 GTCATGGACTCTTTGGATGACG 59.067 50.000 0.00 0.00 35.10 4.35
179 186 3.099905 TGGACTCTTTGGATGACGAGAT 58.900 45.455 0.00 0.00 0.00 2.75
183 193 6.106673 GGACTCTTTGGATGACGAGATAAAA 58.893 40.000 0.00 0.00 0.00 1.52
235 258 5.273944 GCGTCTGACTCTTTGTTCAAATTT 58.726 37.500 6.21 0.00 0.00 1.82
288 311 2.956439 GCAGCACGATCGCGATCA 60.956 61.111 39.26 9.34 41.64 2.92
295 318 1.197949 CACGATCGCGATCATCTAGGT 59.802 52.381 39.26 27.72 41.64 3.08
306 329 4.159321 CGATCATCTAGGTATCATGCTGGT 59.841 45.833 0.00 0.00 0.00 4.00
350 373 4.318332 CCGGCATTCATCATCTTAGCTTA 58.682 43.478 0.00 0.00 0.00 3.09
414 446 5.538053 TGTTTCTCTTTGGGCATTATTGTGA 59.462 36.000 0.00 0.00 0.00 3.58
459 491 2.777114 TGGCTTATCTGGATGCTGGTTA 59.223 45.455 0.00 0.00 0.00 2.85
490 522 9.174166 GACTTTTGCTTTATCTATAAAGTGGGA 57.826 33.333 18.85 7.15 46.78 4.37
500 532 2.467566 TAAAGTGGGACGAAAGCCTC 57.532 50.000 0.00 0.00 0.00 4.70
515 547 0.318762 GCCTCTTTCGAGACACCACT 59.681 55.000 0.00 0.00 39.74 4.00
516 548 1.670380 GCCTCTTTCGAGACACCACTC 60.670 57.143 0.00 0.00 39.74 3.51
520 552 3.858877 CTCTTTCGAGACACCACTCTTGG 60.859 52.174 0.00 0.00 43.50 3.61
536 568 7.162082 CCACTCTTGGTAGTTTTGATTAGAGT 58.838 38.462 0.00 0.00 41.11 3.24
537 569 7.661847 CCACTCTTGGTAGTTTTGATTAGAGTT 59.338 37.037 0.00 0.00 39.10 3.01
538 570 9.706691 CACTCTTGGTAGTTTTGATTAGAGTTA 57.293 33.333 0.00 0.00 39.10 2.24
566 599 2.023673 CAAAGACACAACCTTGCTCCA 58.976 47.619 0.00 0.00 0.00 3.86
584 617 1.071299 ACGCTGACACCATTGCTGA 59.929 52.632 0.00 0.00 0.00 4.26
585 618 0.321919 ACGCTGACACCATTGCTGAT 60.322 50.000 0.00 0.00 0.00 2.90
586 619 0.098200 CGCTGACACCATTGCTGATG 59.902 55.000 0.00 0.00 35.42 3.07
587 620 1.171308 GCTGACACCATTGCTGATGT 58.829 50.000 0.00 0.00 33.71 3.06
588 621 1.135489 GCTGACACCATTGCTGATGTG 60.135 52.381 0.00 0.00 33.71 3.21
589 622 0.883153 TGACACCATTGCTGATGTGC 59.117 50.000 0.00 0.00 33.71 4.57
590 623 1.171308 GACACCATTGCTGATGTGCT 58.829 50.000 0.00 0.00 33.71 4.40
591 624 1.542915 GACACCATTGCTGATGTGCTT 59.457 47.619 0.00 0.00 33.71 3.91
592 625 1.271379 ACACCATTGCTGATGTGCTTG 59.729 47.619 0.00 0.00 33.71 4.01
593 626 0.245539 ACCATTGCTGATGTGCTTGC 59.754 50.000 0.00 0.00 33.71 4.01
594 627 0.245266 CCATTGCTGATGTGCTTGCA 59.755 50.000 0.00 0.00 33.71 4.08
595 628 1.134818 CCATTGCTGATGTGCTTGCAT 60.135 47.619 0.00 0.00 35.27 3.96
596 629 2.616960 CATTGCTGATGTGCTTGCATT 58.383 42.857 0.00 0.00 35.27 3.56
597 630 2.823924 TTGCTGATGTGCTTGCATTT 57.176 40.000 0.00 0.00 35.27 2.32
598 631 2.823924 TGCTGATGTGCTTGCATTTT 57.176 40.000 0.00 0.00 0.00 1.82
599 632 3.114668 TGCTGATGTGCTTGCATTTTT 57.885 38.095 0.00 0.00 0.00 1.94
657 690 2.934553 ACTTGATCTCGTCACATGCATG 59.065 45.455 25.09 25.09 36.32 4.06
665 698 5.281727 TCTCGTCACATGCATGTATAGTTC 58.718 41.667 30.92 15.77 39.39 3.01
666 699 4.041723 TCGTCACATGCATGTATAGTTCG 58.958 43.478 30.92 24.28 39.39 3.95
733 766 0.245539 GCTGGTGTGCCTCGTAGTAA 59.754 55.000 0.00 0.00 35.27 2.24
743 776 3.449377 TGCCTCGTAGTAAACATCATCCA 59.551 43.478 0.00 0.00 0.00 3.41
750 783 8.867112 TCGTAGTAAACATCATCCAGAAATAC 57.133 34.615 0.00 0.00 0.00 1.89
751 784 7.924412 TCGTAGTAAACATCATCCAGAAATACC 59.076 37.037 0.00 0.00 0.00 2.73
752 785 7.170998 CGTAGTAAACATCATCCAGAAATACCC 59.829 40.741 0.00 0.00 0.00 3.69
755 788 2.154462 CATCATCCAGAAATACCCGCC 58.846 52.381 0.00 0.00 0.00 6.13
765 798 6.012858 TCCAGAAATACCCGCCATTCTTATAT 60.013 38.462 0.00 0.00 30.01 0.86
766 799 7.181305 TCCAGAAATACCCGCCATTCTTATATA 59.819 37.037 0.00 0.00 30.01 0.86
767 800 7.280205 CCAGAAATACCCGCCATTCTTATATAC 59.720 40.741 0.00 0.00 30.01 1.47
768 801 8.041323 CAGAAATACCCGCCATTCTTATATACT 58.959 37.037 0.00 0.00 30.01 2.12
769 802 9.263446 AGAAATACCCGCCATTCTTATATACTA 57.737 33.333 0.00 0.00 0.00 1.82
770 803 9.310716 GAAATACCCGCCATTCTTATATACTAC 57.689 37.037 0.00 0.00 0.00 2.73
771 804 5.320549 ACCCGCCATTCTTATATACTACG 57.679 43.478 0.00 0.00 0.00 3.51
791 824 8.403606 ACTACGTACAATTTGTCTGTTATAGC 57.596 34.615 5.07 0.00 0.00 2.97
905 946 1.257750 TAAAGCGGCTGCCAGAGAGA 61.258 55.000 20.29 0.00 44.31 3.10
907 948 3.768922 GCGGCTGCCAGAGAGAGT 61.769 66.667 20.29 0.00 33.98 3.24
989 1036 1.976112 GGGAGTCCGAGAAGCTTGT 59.024 57.895 2.10 0.00 0.00 3.16
1112 1160 2.362717 CCTTGAGATCCCTCCGTAAGTC 59.637 54.545 0.00 0.00 38.66 3.01
1127 1175 3.181489 CGTAAGTCCACCTAGCTTGTAGG 60.181 52.174 0.00 0.00 40.49 3.18
1129 1177 2.741145 AGTCCACCTAGCTTGTAGGAG 58.259 52.381 8.06 0.00 38.09 3.69
1138 1186 6.659668 CACCTAGCTTGTAGGAGCAGTATATA 59.340 42.308 8.06 0.00 45.12 0.86
1226 1324 1.768684 AAGAAGACGGGGCTGCTGAA 61.769 55.000 0.00 0.00 0.00 3.02
1236 1334 3.485431 CTGCTGAAGTCGCTGCCG 61.485 66.667 0.00 0.00 32.49 5.69
1269 1367 2.345244 CTGGTGCTGTTCGAGGCT 59.655 61.111 0.00 0.00 0.00 4.58
1413 1513 1.227205 GAGCTCGATCTGGCTGGTG 60.227 63.158 12.81 0.00 39.05 4.17
1414 1514 2.202987 GCTCGATCTGGCTGGTGG 60.203 66.667 0.00 0.00 0.00 4.61
1544 2254 7.047271 ACTACTAGAGTAAACTACTTCCTCCG 58.953 42.308 0.00 0.00 39.59 4.63
1548 2258 3.095332 AGTAAACTACTTCCTCCGTCCC 58.905 50.000 0.00 0.00 34.86 4.46
1550 2260 2.249309 AACTACTTCCTCCGTCCCAT 57.751 50.000 0.00 0.00 0.00 4.00
1551 2261 3.393426 AACTACTTCCTCCGTCCCATA 57.607 47.619 0.00 0.00 0.00 2.74
1557 2267 7.243824 ACTACTTCCTCCGTCCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
1560 2270 6.437793 ACTTCCTCCGTCCCATAATATAAGAG 59.562 42.308 0.00 0.00 0.00 2.85
1561 2271 4.710375 TCCTCCGTCCCATAATATAAGAGC 59.290 45.833 0.00 0.00 0.00 4.09
1567 2277 7.606456 TCCGTCCCATAATATAAGAGCATTTTC 59.394 37.037 0.00 0.00 0.00 2.29
1582 2292 8.553459 AGAGCATTTTCTTATATTATGGGACG 57.447 34.615 0.00 0.00 0.00 4.79
1583 2293 7.607991 AGAGCATTTTCTTATATTATGGGACGG 59.392 37.037 0.00 0.00 0.00 4.79
1584 2294 7.458397 AGCATTTTCTTATATTATGGGACGGA 58.542 34.615 0.00 0.00 0.00 4.69
1585 2295 7.607991 AGCATTTTCTTATATTATGGGACGGAG 59.392 37.037 0.00 0.00 0.00 4.63
1586 2296 7.148239 GCATTTTCTTATATTATGGGACGGAGG 60.148 40.741 0.00 0.00 0.00 4.30
1587 2297 6.368779 TTTCTTATATTATGGGACGGAGGG 57.631 41.667 0.00 0.00 0.00 4.30
1589 2299 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
1610 2320 5.046288 AGTACCTATTACTCCAGCTACGT 57.954 43.478 0.00 0.00 36.09 3.57
1611 2321 6.179906 AGTACCTATTACTCCAGCTACGTA 57.820 41.667 0.00 0.00 36.09 3.57
1626 2341 1.590932 ACGTAGTACCGATGCGATCT 58.409 50.000 0.00 0.00 41.94 2.75
1627 2342 2.759191 ACGTAGTACCGATGCGATCTA 58.241 47.619 0.00 0.00 41.94 1.98
1628 2343 3.332919 ACGTAGTACCGATGCGATCTAT 58.667 45.455 0.00 0.00 41.94 1.98
1646 2361 4.422057 TCTATACTCCAACTTCCACCACA 58.578 43.478 0.00 0.00 0.00 4.17
1656 2371 5.466393 CCAACTTCCACCACAAAATTGATTC 59.534 40.000 0.00 0.00 0.00 2.52
1769 2529 6.647067 GCTGACTTTCTATGTTGTCTTGTAGT 59.353 38.462 0.00 0.00 0.00 2.73
1770 2530 7.813148 GCTGACTTTCTATGTTGTCTTGTAGTA 59.187 37.037 0.00 0.00 0.00 1.82
2025 3767 0.250234 CAATTCCTCCCACTCGCTGA 59.750 55.000 0.00 0.00 0.00 4.26
2069 3830 4.357918 AGCTTTGCACGGGATAAGATAT 57.642 40.909 3.67 0.00 0.00 1.63
2094 3855 2.642154 TTAGAAAAACTCCGGGCACA 57.358 45.000 0.00 0.00 0.00 4.57
2111 3872 0.532862 ACAGAACGACCTTGGCTGTG 60.533 55.000 0.00 0.00 38.30 3.66
2189 3954 0.377203 GGACGTGATTGGAATTCCGC 59.623 55.000 19.57 11.74 39.43 5.54
2190 3955 1.369625 GACGTGATTGGAATTCCGCT 58.630 50.000 19.57 9.10 39.43 5.52
2234 3999 1.466855 GTGCAAGCGTTTGACAAGAC 58.533 50.000 16.78 0.00 36.36 3.01
2239 4004 2.309528 AGCGTTTGACAAGACACTCA 57.690 45.000 0.00 0.00 0.00 3.41
2383 4186 7.425577 AAAGCTGCCAAAAGTTGATAATTTC 57.574 32.000 0.00 0.00 0.00 2.17
2414 4217 8.312564 AGGTTAGTAAGAAAAGTTGGTAGCTAG 58.687 37.037 0.00 0.00 0.00 3.42
2422 4225 8.549338 AGAAAAGTTGGTAGCTAGTCAATTAC 57.451 34.615 11.24 2.40 0.00 1.89
2423 4226 8.376270 AGAAAAGTTGGTAGCTAGTCAATTACT 58.624 33.333 11.24 4.23 42.62 2.24
2424 4227 7.907214 AAAGTTGGTAGCTAGTCAATTACTG 57.093 36.000 11.24 0.00 39.39 2.74
2481 4284 3.216147 CCAACTTTTGGCATAGAACCG 57.784 47.619 4.38 0.00 45.17 4.44
2485 4288 2.936498 ACTTTTGGCATAGAACCGATCG 59.064 45.455 8.51 8.51 0.00 3.69
2508 4311 8.861033 TCGTACTTTATATGTCACATACCAAC 57.139 34.615 0.00 0.00 0.00 3.77
2604 4411 6.846325 AACTTTTTCTAGCACAGTACAGTC 57.154 37.500 0.00 0.00 0.00 3.51
2605 4412 5.914033 ACTTTTTCTAGCACAGTACAGTCA 58.086 37.500 0.00 0.00 0.00 3.41
2606 4413 5.753921 ACTTTTTCTAGCACAGTACAGTCAC 59.246 40.000 0.00 0.00 0.00 3.67
2607 4414 4.929819 TTTCTAGCACAGTACAGTCACA 57.070 40.909 0.00 0.00 0.00 3.58
2608 4415 3.917329 TCTAGCACAGTACAGTCACAC 57.083 47.619 0.00 0.00 0.00 3.82
2609 4416 3.219281 TCTAGCACAGTACAGTCACACA 58.781 45.455 0.00 0.00 0.00 3.72
2611 4418 3.032017 AGCACAGTACAGTCACACATC 57.968 47.619 0.00 0.00 0.00 3.06
2612 4419 2.630098 AGCACAGTACAGTCACACATCT 59.370 45.455 0.00 0.00 0.00 2.90
2614 4421 3.809832 GCACAGTACAGTCACACATCTTT 59.190 43.478 0.00 0.00 0.00 2.52
2616 4423 5.465390 GCACAGTACAGTCACACATCTTTTA 59.535 40.000 0.00 0.00 0.00 1.52
2618 4425 7.330946 GCACAGTACAGTCACACATCTTTTATA 59.669 37.037 0.00 0.00 0.00 0.98
2619 4426 8.648097 CACAGTACAGTCACACATCTTTTATAC 58.352 37.037 0.00 0.00 0.00 1.47
2690 5695 5.003160 TGCATGCAGTACAAGAACATAACT 58.997 37.500 18.46 0.00 0.00 2.24
2697 5702 4.929808 AGTACAAGAACATAACTGAAGCGG 59.070 41.667 0.00 0.00 0.00 5.52
2895 5900 1.153881 GTCCACCTCGACGTAAGCC 60.154 63.158 0.00 0.00 45.62 4.35
2904 5909 6.261603 CCACCTCGACGTAAGCCATATATATA 59.738 42.308 0.00 0.00 45.62 0.86
3001 6108 1.112916 TGTCGTCCAAGAGGCTGTCA 61.113 55.000 0.00 0.00 33.74 3.58
3322 6441 2.126189 GACTACGTCGCCCGCTTT 60.126 61.111 0.00 0.00 41.42 3.51
3390 6519 1.653609 TGCAATCGATCGTCTTTCGTG 59.346 47.619 15.94 5.23 40.80 4.35
3450 6584 2.292103 TGTGCTTGTTTTTCTGTGGC 57.708 45.000 0.00 0.00 0.00 5.01
3461 6598 3.964875 CTGTGGCGGTGGTGTTGC 61.965 66.667 0.00 0.00 0.00 4.17
3509 6646 0.250513 AGGGTGATTCGACCAAGCTC 59.749 55.000 0.00 0.00 37.80 4.09
3526 6663 0.613260 CTCGTGGATCTGGGGTTCAA 59.387 55.000 0.00 0.00 0.00 2.69
3636 6796 4.897025 AAAAACCATGTACCGTCGAAAA 57.103 36.364 0.00 0.00 0.00 2.29
3637 6797 4.477302 AAAACCATGTACCGTCGAAAAG 57.523 40.909 0.00 0.00 0.00 2.27
3734 6918 6.894339 TTGAAGTATGGTCTTCTTTTTCCC 57.106 37.500 7.72 0.00 42.76 3.97
3769 6959 7.101054 TGTGTAATGTGTCCCTGTTATTAGTC 58.899 38.462 0.00 0.00 0.00 2.59
3824 7015 8.981724 CCTTCTTTTTGGTTTATAAGGCTTAC 57.018 34.615 9.55 0.00 0.00 2.34
3835 7029 7.816031 GGTTTATAAGGCTTACGCATATCACTA 59.184 37.037 9.55 0.00 38.10 2.74
3839 7033 5.317733 AGGCTTACGCATATCACTAGATC 57.682 43.478 0.00 0.00 38.10 2.75
3875 7069 9.920946 ATCAACATAAAATGGGTTGTATAGTCT 57.079 29.630 0.00 0.00 41.87 3.24
3876 7070 9.173021 TCAACATAAAATGGGTTGTATAGTCTG 57.827 33.333 0.00 0.00 41.87 3.51
3888 7082 7.364408 GGGTTGTATAGTCTGAAACTCATACCA 60.364 40.741 0.00 0.00 39.55 3.25
3900 7094 9.653287 CTGAAACTCATACCATTAGAAAGTACA 57.347 33.333 0.00 0.00 0.00 2.90
3903 7097 7.400599 ACTCATACCATTAGAAAGTACACGA 57.599 36.000 0.00 0.00 0.00 4.35
3904 7098 8.008513 ACTCATACCATTAGAAAGTACACGAT 57.991 34.615 0.00 0.00 0.00 3.73
3905 7099 8.475639 ACTCATACCATTAGAAAGTACACGATT 58.524 33.333 0.00 0.00 0.00 3.34
3906 7100 9.314321 CTCATACCATTAGAAAGTACACGATTT 57.686 33.333 0.00 0.00 0.00 2.17
3907 7101 9.093970 TCATACCATTAGAAAGTACACGATTTG 57.906 33.333 0.00 0.00 0.00 2.32
3908 7102 9.093970 CATACCATTAGAAAGTACACGATTTGA 57.906 33.333 0.00 0.00 0.00 2.69
3909 7103 7.972832 ACCATTAGAAAGTACACGATTTGAA 57.027 32.000 0.00 0.00 0.00 2.69
3910 7104 8.029642 ACCATTAGAAAGTACACGATTTGAAG 57.970 34.615 0.00 0.00 0.00 3.02
3911 7105 7.660208 ACCATTAGAAAGTACACGATTTGAAGT 59.340 33.333 0.00 0.00 0.00 3.01
3912 7106 8.504005 CCATTAGAAAGTACACGATTTGAAGTT 58.496 33.333 0.00 0.00 0.00 2.66
3913 7107 9.878599 CATTAGAAAGTACACGATTTGAAGTTT 57.121 29.630 0.00 0.00 0.00 2.66
3915 7109 7.787725 AGAAAGTACACGATTTGAAGTTTCT 57.212 32.000 0.00 0.00 31.57 2.52
3916 7110 8.882415 AGAAAGTACACGATTTGAAGTTTCTA 57.118 30.769 0.00 0.00 33.16 2.10
3917 7111 9.321562 AGAAAGTACACGATTTGAAGTTTCTAA 57.678 29.630 0.00 0.00 33.16 2.10
3919 7113 9.878599 AAAGTACACGATTTGAAGTTTCTAATG 57.121 29.630 6.33 3.12 33.83 1.90
3920 7114 8.827177 AGTACACGATTTGAAGTTTCTAATGA 57.173 30.769 6.33 0.00 33.83 2.57
3921 7115 9.436957 AGTACACGATTTGAAGTTTCTAATGAT 57.563 29.630 6.33 0.00 33.83 2.45
3969 7163 9.701098 TGTATTATGTCGGTCTATTTATCAACC 57.299 33.333 0.00 0.00 0.00 3.77
3970 7164 9.924650 GTATTATGTCGGTCTATTTATCAACCT 57.075 33.333 0.00 0.00 0.00 3.50
3974 7168 8.888579 ATGTCGGTCTATTTATCAACCTAAAG 57.111 34.615 0.00 0.00 0.00 1.85
3975 7169 8.070034 TGTCGGTCTATTTATCAACCTAAAGA 57.930 34.615 0.00 0.00 0.00 2.52
3976 7170 8.701895 TGTCGGTCTATTTATCAACCTAAAGAT 58.298 33.333 0.00 0.00 0.00 2.40
3979 7173 9.125906 CGGTCTATTTATCAACCTAAAGATACG 57.874 37.037 0.00 0.00 0.00 3.06
3980 7174 8.923683 GGTCTATTTATCAACCTAAAGATACGC 58.076 37.037 0.00 0.00 0.00 4.42
3981 7175 9.472361 GTCTATTTATCAACCTAAAGATACGCA 57.528 33.333 0.00 0.00 0.00 5.24
3982 7176 9.472361 TCTATTTATCAACCTAAAGATACGCAC 57.528 33.333 0.00 0.00 0.00 5.34
3983 7177 9.256477 CTATTTATCAACCTAAAGATACGCACA 57.744 33.333 0.00 0.00 0.00 4.57
3984 7178 7.908827 TTTATCAACCTAAAGATACGCACAA 57.091 32.000 0.00 0.00 0.00 3.33
3985 7179 5.796350 ATCAACCTAAAGATACGCACAAC 57.204 39.130 0.00 0.00 0.00 3.32
3986 7180 3.998341 TCAACCTAAAGATACGCACAACC 59.002 43.478 0.00 0.00 0.00 3.77
3987 7181 2.981898 ACCTAAAGATACGCACAACCC 58.018 47.619 0.00 0.00 0.00 4.11
3988 7182 2.570302 ACCTAAAGATACGCACAACCCT 59.430 45.455 0.00 0.00 0.00 4.34
3989 7183 3.008704 ACCTAAAGATACGCACAACCCTT 59.991 43.478 0.00 0.00 0.00 3.95
3990 7184 4.223477 ACCTAAAGATACGCACAACCCTTA 59.777 41.667 0.00 0.00 0.00 2.69
3991 7185 5.104652 ACCTAAAGATACGCACAACCCTTAT 60.105 40.000 0.00 0.00 0.00 1.73
3992 7186 6.098695 ACCTAAAGATACGCACAACCCTTATA 59.901 38.462 0.00 0.00 0.00 0.98
3993 7187 6.987992 CCTAAAGATACGCACAACCCTTATAA 59.012 38.462 0.00 0.00 0.00 0.98
3994 7188 7.496591 CCTAAAGATACGCACAACCCTTATAAA 59.503 37.037 0.00 0.00 0.00 1.40
3995 7189 7.875327 AAAGATACGCACAACCCTTATAAAT 57.125 32.000 0.00 0.00 0.00 1.40
3996 7190 7.492352 AAGATACGCACAACCCTTATAAATC 57.508 36.000 0.00 0.00 0.00 2.17
3997 7191 5.694910 AGATACGCACAACCCTTATAAATCG 59.305 40.000 0.00 0.00 0.00 3.34
3998 7192 2.940410 ACGCACAACCCTTATAAATCGG 59.060 45.455 0.00 0.00 0.00 4.18
3999 7193 3.199677 CGCACAACCCTTATAAATCGGA 58.800 45.455 1.00 0.00 0.00 4.55
4000 7194 3.623960 CGCACAACCCTTATAAATCGGAA 59.376 43.478 1.00 0.00 0.00 4.30
4001 7195 4.095185 CGCACAACCCTTATAAATCGGAAA 59.905 41.667 1.00 0.00 0.00 3.13
4002 7196 5.220970 CGCACAACCCTTATAAATCGGAAAT 60.221 40.000 1.00 0.00 0.00 2.17
4003 7197 6.017770 CGCACAACCCTTATAAATCGGAAATA 60.018 38.462 1.00 0.00 0.00 1.40
4004 7198 7.467539 CGCACAACCCTTATAAATCGGAAATAA 60.468 37.037 1.00 0.00 0.00 1.40
4005 7199 7.860872 GCACAACCCTTATAAATCGGAAATAAG 59.139 37.037 9.46 9.46 34.42 1.73
4006 7200 8.349983 CACAACCCTTATAAATCGGAAATAAGG 58.650 37.037 19.95 19.95 46.31 2.69
4007 7201 8.057011 ACAACCCTTATAAATCGGAAATAAGGT 58.943 33.333 22.48 14.44 45.73 3.50
4008 7202 9.563748 CAACCCTTATAAATCGGAAATAAGGTA 57.436 33.333 22.48 0.00 45.73 3.08
4009 7203 9.788889 AACCCTTATAAATCGGAAATAAGGTAG 57.211 33.333 22.48 15.92 45.73 3.18
4010 7204 8.942033 ACCCTTATAAATCGGAAATAAGGTAGT 58.058 33.333 22.48 16.30 45.73 2.73
4022 7216 9.017669 CGGAAATAAGGTAGTATCGTATATTGC 57.982 37.037 0.00 0.00 0.00 3.56
4023 7217 9.017669 GGAAATAAGGTAGTATCGTATATTGCG 57.982 37.037 0.00 0.00 0.00 4.85
4024 7218 9.565213 GAAATAAGGTAGTATCGTATATTGCGT 57.435 33.333 0.00 0.00 0.00 5.24
4025 7219 8.906636 AATAAGGTAGTATCGTATATTGCGTG 57.093 34.615 0.00 0.00 0.00 5.34
4026 7220 5.954296 AGGTAGTATCGTATATTGCGTGT 57.046 39.130 0.00 0.00 0.00 4.49
4027 7221 6.323203 AGGTAGTATCGTATATTGCGTGTT 57.677 37.500 0.00 0.00 0.00 3.32
4028 7222 6.742109 AGGTAGTATCGTATATTGCGTGTTT 58.258 36.000 0.00 0.00 0.00 2.83
4029 7223 7.205297 AGGTAGTATCGTATATTGCGTGTTTT 58.795 34.615 0.00 0.00 0.00 2.43
4030 7224 8.352201 AGGTAGTATCGTATATTGCGTGTTTTA 58.648 33.333 0.00 0.00 0.00 1.52
4031 7225 8.633408 GGTAGTATCGTATATTGCGTGTTTTAG 58.367 37.037 0.00 0.00 0.00 1.85
4032 7226 9.173939 GTAGTATCGTATATTGCGTGTTTTAGT 57.826 33.333 0.00 0.00 0.00 2.24
4034 7228 9.390795 AGTATCGTATATTGCGTGTTTTAGTAG 57.609 33.333 0.00 0.00 0.00 2.57
4035 7229 9.173939 GTATCGTATATTGCGTGTTTTAGTAGT 57.826 33.333 0.00 0.00 0.00 2.73
4036 7230 8.638685 ATCGTATATTGCGTGTTTTAGTAGTT 57.361 30.769 0.00 0.00 0.00 2.24
4037 7231 8.464770 TCGTATATTGCGTGTTTTAGTAGTTT 57.535 30.769 0.00 0.00 0.00 2.66
4038 7232 8.374728 TCGTATATTGCGTGTTTTAGTAGTTTG 58.625 33.333 0.00 0.00 0.00 2.93
4039 7233 8.374728 CGTATATTGCGTGTTTTAGTAGTTTGA 58.625 33.333 0.00 0.00 0.00 2.69
4042 7236 9.953697 ATATTGCGTGTTTTAGTAGTTTGAAAA 57.046 25.926 0.00 0.00 0.00 2.29
4043 7237 7.728580 TTGCGTGTTTTAGTAGTTTGAAAAG 57.271 32.000 0.00 0.00 0.00 2.27
4044 7238 5.740099 TGCGTGTTTTAGTAGTTTGAAAAGC 59.260 36.000 0.00 0.00 0.00 3.51
4045 7239 5.108891 GCGTGTTTTAGTAGTTTGAAAAGCG 60.109 40.000 0.00 0.00 29.71 4.68
4046 7240 6.186785 CGTGTTTTAGTAGTTTGAAAAGCGA 58.813 36.000 0.00 0.00 29.71 4.93
4047 7241 6.683708 CGTGTTTTAGTAGTTTGAAAAGCGAA 59.316 34.615 0.00 0.00 29.71 4.70
4048 7242 7.216693 CGTGTTTTAGTAGTTTGAAAAGCGAAA 59.783 33.333 0.00 0.00 29.71 3.46
4049 7243 9.016623 GTGTTTTAGTAGTTTGAAAAGCGAAAT 57.983 29.630 0.00 0.00 29.71 2.17
4050 7244 9.228636 TGTTTTAGTAGTTTGAAAAGCGAAATC 57.771 29.630 0.00 0.00 29.71 2.17
4051 7245 9.228636 GTTTTAGTAGTTTGAAAAGCGAAATCA 57.771 29.630 0.00 0.00 29.71 2.57
4052 7246 8.776680 TTTAGTAGTTTGAAAAGCGAAATCAC 57.223 30.769 0.00 0.00 29.71 3.06
4053 7247 6.371809 AGTAGTTTGAAAAGCGAAATCACA 57.628 33.333 0.00 0.00 29.71 3.58
4054 7248 6.791303 AGTAGTTTGAAAAGCGAAATCACAA 58.209 32.000 0.00 0.00 29.71 3.33
4055 7249 6.912591 AGTAGTTTGAAAAGCGAAATCACAAG 59.087 34.615 0.00 0.00 29.71 3.16
4056 7250 5.650543 AGTTTGAAAAGCGAAATCACAAGT 58.349 33.333 0.00 0.00 29.71 3.16
4057 7251 6.099341 AGTTTGAAAAGCGAAATCACAAGTT 58.901 32.000 0.00 0.00 29.71 2.66
4058 7252 7.254852 AGTTTGAAAAGCGAAATCACAAGTTA 58.745 30.769 0.00 0.00 29.71 2.24
4059 7253 7.757624 AGTTTGAAAAGCGAAATCACAAGTTAA 59.242 29.630 0.00 0.00 29.71 2.01
4086 7280 2.107204 ACTCCTTGCAAACATCACTCCT 59.893 45.455 0.00 0.00 0.00 3.69
4093 7287 3.691118 TGCAAACATCACTCCTATCTTGC 59.309 43.478 0.00 0.00 38.66 4.01
4094 7288 3.242543 GCAAACATCACTCCTATCTTGCG 60.243 47.826 0.00 0.00 0.00 4.85
4098 7292 0.747255 TCACTCCTATCTTGCGAGGC 59.253 55.000 0.00 0.00 32.40 4.70
4100 7294 1.006805 CTCCTATCTTGCGAGGCCG 60.007 63.158 0.00 0.00 39.16 6.13
4112 7306 1.944676 GAGGCCGCGATAAGTGACG 60.945 63.158 8.23 0.00 0.00 4.35
4134 7328 3.165890 CGCTTTATGTGCATCACTTGTG 58.834 45.455 0.00 0.00 35.11 3.33
4139 7333 1.330234 TGTGCATCACTTGTGGCAAT 58.670 45.000 6.33 0.00 38.10 3.56
4140 7334 1.270274 TGTGCATCACTTGTGGCAATC 59.730 47.619 6.33 0.00 38.10 2.67
4141 7335 1.542915 GTGCATCACTTGTGGCAATCT 59.457 47.619 6.33 0.00 38.10 2.40
4142 7336 1.542472 TGCATCACTTGTGGCAATCTG 59.458 47.619 0.00 0.00 32.54 2.90
4143 7337 1.814394 GCATCACTTGTGGCAATCTGA 59.186 47.619 0.00 0.00 0.00 3.27
4152 7346 4.090761 TGTGGCAATCTGAGAGTTTTCT 57.909 40.909 0.00 0.00 36.01 2.52
4201 7395 8.515473 AAAATGTTTTATCTCTTAAACCGTGC 57.485 30.769 0.00 0.00 34.21 5.34
4212 7406 2.961522 AAACCGTGCGTACAAATCTG 57.038 45.000 4.09 0.00 0.00 2.90
4213 7407 2.157834 AACCGTGCGTACAAATCTGA 57.842 45.000 4.09 0.00 0.00 3.27
4216 7410 2.222445 ACCGTGCGTACAAATCTGAAAC 59.778 45.455 4.09 0.00 0.00 2.78
4217 7411 2.412325 CCGTGCGTACAAATCTGAAACC 60.412 50.000 4.09 0.00 0.00 3.27
4223 7417 4.377738 GCGTACAAATCTGAAACCGTTTTC 59.622 41.667 0.00 0.00 41.49 2.29
4239 7433 5.030295 CCGTTTTCATCATTGGATTCTTCG 58.970 41.667 0.00 0.00 0.00 3.79
4240 7434 4.496895 CGTTTTCATCATTGGATTCTTCGC 59.503 41.667 0.00 0.00 0.00 4.70
4249 7443 1.268589 TGGATTCTTCGCGTCGAGATC 60.269 52.381 5.77 4.95 37.14 2.75
4284 7479 8.725148 AGATCTGTGTTGATAGATTTGACAAAC 58.275 33.333 1.94 0.00 33.97 2.93
4320 7515 4.922719 AGATAGGACGAAATCACGAGAAC 58.077 43.478 0.00 0.00 37.03 3.01
4328 7523 5.475719 ACGAAATCACGAGAACTAAATCCA 58.524 37.500 0.00 0.00 37.03 3.41
4334 7529 3.557595 CACGAGAACTAAATCCATGCCTC 59.442 47.826 0.00 0.00 0.00 4.70
4338 7533 3.950395 AGAACTAAATCCATGCCTCTTGC 59.050 43.478 0.00 0.00 41.77 4.01
4340 7535 1.605710 CTAAATCCATGCCTCTTGCGG 59.394 52.381 0.00 0.00 45.60 5.69
4414 7609 1.272781 CGGAAGCGAATCTGTGTCTC 58.727 55.000 0.00 0.00 0.00 3.36
4423 7618 3.611766 CGAATCTGTGTCTCCACGAGAAA 60.612 47.826 0.00 0.00 44.92 2.52
4428 7623 5.227908 TCTGTGTCTCCACGAGAAATAAAC 58.772 41.667 0.00 0.00 44.92 2.01
4492 7689 4.479993 GAGAGGCATGCCCGTGCT 62.480 66.667 33.14 23.59 44.45 4.40
4493 7690 3.984193 GAGAGGCATGCCCGTGCTT 62.984 63.158 33.14 13.92 44.45 3.91
4499 7696 3.965258 ATGCCCGTGCTTCCCACA 61.965 61.111 0.00 0.00 44.91 4.17
4520 7717 0.328258 AAGCAAATCCGTGCCTACCT 59.672 50.000 0.00 0.00 46.14 3.08
4521 7718 0.392998 AGCAAATCCGTGCCTACCTG 60.393 55.000 0.00 0.00 46.14 4.00
4522 7719 0.392461 GCAAATCCGTGCCTACCTGA 60.392 55.000 0.00 0.00 38.66 3.86
4523 7720 1.948611 GCAAATCCGTGCCTACCTGAA 60.949 52.381 0.00 0.00 38.66 3.02
4524 7721 2.009774 CAAATCCGTGCCTACCTGAAG 58.990 52.381 0.00 0.00 0.00 3.02
4525 7722 0.541863 AATCCGTGCCTACCTGAAGG 59.458 55.000 0.00 0.00 39.87 3.46
4526 7723 0.325296 ATCCGTGCCTACCTGAAGGA 60.325 55.000 2.62 0.00 39.15 3.36
4527 7724 0.543410 TCCGTGCCTACCTGAAGGAA 60.543 55.000 2.62 0.00 39.15 3.36
4528 7725 0.323629 CCGTGCCTACCTGAAGGAAA 59.676 55.000 2.62 0.00 39.15 3.13
4529 7726 1.065418 CCGTGCCTACCTGAAGGAAAT 60.065 52.381 2.62 0.00 39.15 2.17
4530 7727 2.169769 CCGTGCCTACCTGAAGGAAATA 59.830 50.000 2.62 0.00 39.15 1.40
4531 7728 3.181454 CCGTGCCTACCTGAAGGAAATAT 60.181 47.826 2.62 0.00 39.15 1.28
4532 7729 3.809832 CGTGCCTACCTGAAGGAAATATG 59.190 47.826 2.62 0.00 39.15 1.78
4533 7730 3.565902 GTGCCTACCTGAAGGAAATATGC 59.434 47.826 2.62 0.00 39.15 3.14
4534 7731 3.149981 GCCTACCTGAAGGAAATATGCC 58.850 50.000 2.62 0.00 39.15 4.40
4535 7732 3.756117 CCTACCTGAAGGAAATATGCCC 58.244 50.000 2.62 0.00 39.15 5.36
4536 7733 3.395941 CCTACCTGAAGGAAATATGCCCT 59.604 47.826 2.62 0.00 39.15 5.19
4537 7734 4.597507 CCTACCTGAAGGAAATATGCCCTA 59.402 45.833 2.62 0.00 39.15 3.53
4538 7735 4.713792 ACCTGAAGGAAATATGCCCTAG 57.286 45.455 2.62 0.00 38.94 3.02
4539 7736 4.307259 ACCTGAAGGAAATATGCCCTAGA 58.693 43.478 2.62 0.00 38.94 2.43
4540 7737 4.349342 ACCTGAAGGAAATATGCCCTAGAG 59.651 45.833 2.62 0.00 38.94 2.43
4541 7738 4.594920 CCTGAAGGAAATATGCCCTAGAGA 59.405 45.833 0.00 0.00 37.39 3.10
4542 7739 5.512232 CCTGAAGGAAATATGCCCTAGAGAC 60.512 48.000 0.00 0.00 37.39 3.36
4543 7740 4.968719 TGAAGGAAATATGCCCTAGAGACA 59.031 41.667 0.00 0.00 31.36 3.41
4544 7741 5.070981 TGAAGGAAATATGCCCTAGAGACAG 59.929 44.000 0.00 0.00 31.36 3.51
4545 7742 4.561752 AGGAAATATGCCCTAGAGACAGT 58.438 43.478 0.00 0.00 0.00 3.55
4546 7743 5.716979 AGGAAATATGCCCTAGAGACAGTA 58.283 41.667 0.00 0.00 0.00 2.74
4547 7744 6.143915 AGGAAATATGCCCTAGAGACAGTAA 58.856 40.000 0.00 0.00 0.00 2.24
4548 7745 6.789959 AGGAAATATGCCCTAGAGACAGTAAT 59.210 38.462 0.00 0.00 0.00 1.89
4549 7746 7.956315 AGGAAATATGCCCTAGAGACAGTAATA 59.044 37.037 0.00 0.00 0.00 0.98
4550 7747 8.594550 GGAAATATGCCCTAGAGACAGTAATAA 58.405 37.037 0.00 0.00 0.00 1.40
4551 7748 9.998106 GAAATATGCCCTAGAGACAGTAATAAA 57.002 33.333 0.00 0.00 0.00 1.40
4553 7750 8.728596 ATATGCCCTAGAGACAGTAATAAAGT 57.271 34.615 0.00 0.00 0.00 2.66
4554 7751 6.869206 TGCCCTAGAGACAGTAATAAAGTT 57.131 37.500 0.00 0.00 0.00 2.66
4555 7752 6.640518 TGCCCTAGAGACAGTAATAAAGTTG 58.359 40.000 0.00 0.00 0.00 3.16
4556 7753 6.212791 TGCCCTAGAGACAGTAATAAAGTTGT 59.787 38.462 0.00 0.00 0.00 3.32
4557 7754 7.104290 GCCCTAGAGACAGTAATAAAGTTGTT 58.896 38.462 0.00 0.00 0.00 2.83
4558 7755 8.255905 GCCCTAGAGACAGTAATAAAGTTGTTA 58.744 37.037 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.661020 ACGAACGAACTGCCAAAAGG 59.339 50.000 0.14 0.00 0.00 3.11
26 27 1.329292 CTCACGAACGAACTGCCAAAA 59.671 47.619 0.14 0.00 0.00 2.44
90 91 0.184451 CATGGTAGCCTTGGCCTGAT 59.816 55.000 3.32 0.00 0.00 2.90
135 137 1.077212 ATGGCCGCAAAGATCAGCT 60.077 52.632 0.00 0.00 0.00 4.24
175 182 5.819901 CACCCTCTCAATCACCTTTTATCTC 59.180 44.000 0.00 0.00 0.00 2.75
179 186 4.993705 ACACCCTCTCAATCACCTTTTA 57.006 40.909 0.00 0.00 0.00 1.52
183 193 1.630878 GGAACACCCTCTCAATCACCT 59.369 52.381 0.00 0.00 0.00 4.00
235 258 5.181245 GTGCCATTACTGCAGAAAAGTAAGA 59.819 40.000 23.35 0.00 41.95 2.10
288 311 3.555795 CGCAACCAGCATGATACCTAGAT 60.556 47.826 0.00 0.00 46.13 1.98
295 318 1.153597 CGAGCGCAACCAGCATGATA 61.154 55.000 11.47 0.00 46.13 2.15
306 329 2.813474 CCGAATCCACGAGCGCAA 60.813 61.111 11.47 0.00 35.09 4.85
328 351 2.775890 AGCTAAGATGATGAATGCCGG 58.224 47.619 0.00 0.00 0.00 6.13
333 356 6.709846 GGACAAGCTAAGCTAAGATGATGAAT 59.290 38.462 0.00 0.00 38.25 2.57
372 400 8.797438 AGAGAAACACAAGAGAAAAGAAAAACT 58.203 29.630 0.00 0.00 0.00 2.66
414 446 2.990967 CAACGGCTGGGGCAACAT 60.991 61.111 0.00 0.00 40.87 2.71
453 485 9.125026 AGATAAAGCAAAAGTCCATATAACCAG 57.875 33.333 0.00 0.00 0.00 4.00
486 518 0.320421 CGAAAGAGGCTTTCGTCCCA 60.320 55.000 25.65 0.00 44.25 4.37
500 532 2.408050 CCAAGAGTGGTGTCTCGAAAG 58.592 52.381 0.00 0.00 40.42 2.62
531 563 7.329588 TGTGTCTTTGCTCGATATAACTCTA 57.670 36.000 0.00 0.00 0.00 2.43
533 565 6.237861 GGTTGTGTCTTTGCTCGATATAACTC 60.238 42.308 0.00 0.00 0.00 3.01
534 566 5.581085 GGTTGTGTCTTTGCTCGATATAACT 59.419 40.000 0.00 0.00 0.00 2.24
536 568 5.730550 AGGTTGTGTCTTTGCTCGATATAA 58.269 37.500 0.00 0.00 0.00 0.98
537 569 5.339008 AGGTTGTGTCTTTGCTCGATATA 57.661 39.130 0.00 0.00 0.00 0.86
538 570 4.207891 AGGTTGTGTCTTTGCTCGATAT 57.792 40.909 0.00 0.00 0.00 1.63
539 571 3.678056 AGGTTGTGTCTTTGCTCGATA 57.322 42.857 0.00 0.00 0.00 2.92
540 572 2.549754 CAAGGTTGTGTCTTTGCTCGAT 59.450 45.455 0.00 0.00 0.00 3.59
541 573 1.939934 CAAGGTTGTGTCTTTGCTCGA 59.060 47.619 0.00 0.00 0.00 4.04
542 574 1.597937 GCAAGGTTGTGTCTTTGCTCG 60.598 52.381 6.34 0.00 43.66 5.03
549 582 0.532862 CGTGGAGCAAGGTTGTGTCT 60.533 55.000 0.00 0.00 0.00 3.41
566 599 0.321919 ATCAGCAATGGTGTCAGCGT 60.322 50.000 12.41 0.00 32.43 5.07
613 646 9.703892 AAGTATGTAAATGCAAGCACATAAAAA 57.296 25.926 15.24 0.00 36.06 1.94
614 647 9.138062 CAAGTATGTAAATGCAAGCACATAAAA 57.862 29.630 15.24 0.00 36.06 1.52
615 648 8.518702 TCAAGTATGTAAATGCAAGCACATAAA 58.481 29.630 15.24 0.00 36.06 1.40
616 649 8.049655 TCAAGTATGTAAATGCAAGCACATAA 57.950 30.769 15.24 2.74 36.06 1.90
617 650 7.622893 TCAAGTATGTAAATGCAAGCACATA 57.377 32.000 11.48 11.48 33.78 2.29
638 671 2.976589 ACATGCATGTGACGAGATCAA 58.023 42.857 30.92 0.00 39.72 2.57
657 690 4.745649 ACAGCAGTTTCTCCGAACTATAC 58.254 43.478 0.00 0.00 37.76 1.47
665 698 1.656095 GATCGAACAGCAGTTTCTCCG 59.344 52.381 0.00 0.00 38.30 4.63
666 699 2.966050 AGATCGAACAGCAGTTTCTCC 58.034 47.619 0.00 0.00 38.30 3.71
716 749 1.687660 TGTTTACTACGAGGCACACCA 59.312 47.619 0.00 0.00 39.06 4.17
733 766 3.214328 GCGGGTATTTCTGGATGATGTT 58.786 45.455 0.00 0.00 0.00 2.71
743 776 8.147244 AGTATATAAGAATGGCGGGTATTTCT 57.853 34.615 0.00 0.00 0.00 2.52
750 783 5.320549 ACGTAGTATATAAGAATGGCGGG 57.679 43.478 0.00 0.00 41.94 6.13
765 798 9.507280 GCTATAACAGACAAATTGTACGTAGTA 57.493 33.333 0.00 0.00 45.11 1.82
766 799 7.490402 GGCTATAACAGACAAATTGTACGTAGT 59.510 37.037 0.00 0.00 36.94 2.73
767 800 7.490079 TGGCTATAACAGACAAATTGTACGTAG 59.510 37.037 0.00 0.00 40.29 3.51
768 801 7.321908 TGGCTATAACAGACAAATTGTACGTA 58.678 34.615 0.00 0.00 40.29 3.57
769 802 6.167685 TGGCTATAACAGACAAATTGTACGT 58.832 36.000 0.00 0.00 40.29 3.57
770 803 6.533723 TCTGGCTATAACAGACAAATTGTACG 59.466 38.462 0.00 0.00 43.63 3.67
771 804 7.466050 GCTCTGGCTATAACAGACAAATTGTAC 60.466 40.741 0.00 0.00 43.63 2.90
788 821 3.402681 GCCCACCTGCTCTGGCTA 61.403 66.667 0.00 0.00 40.77 3.93
791 824 3.618780 GACTGCCCACCTGCTCTGG 62.619 68.421 0.00 0.00 0.00 3.86
905 946 1.270826 CTGACTGTGTCGTCCATGACT 59.729 52.381 0.00 0.00 39.64 3.41
907 948 1.328279 ACTGACTGTGTCGTCCATGA 58.672 50.000 0.00 0.00 34.95 3.07
989 1036 1.280133 CCCTGCTCATCTTCCTCACAA 59.720 52.381 0.00 0.00 0.00 3.33
1112 1160 1.137872 CTGCTCCTACAAGCTAGGTGG 59.862 57.143 0.00 0.00 42.94 4.61
1127 1175 8.385111 GTTGACGAGAGAGTATATATACTGCTC 58.615 40.741 26.51 25.86 43.27 4.26
1129 1177 8.259049 AGTTGACGAGAGAGTATATATACTGC 57.741 38.462 26.51 18.23 43.27 4.40
1138 1186 3.547746 GGAGGAGTTGACGAGAGAGTAT 58.452 50.000 0.00 0.00 0.00 2.12
1269 1367 1.167781 TGGCGGCGTCGTAGATATCA 61.168 55.000 12.58 0.00 40.67 2.15
1382 1480 0.784778 CGAGCTCAAGTTTGTCCGAC 59.215 55.000 15.40 0.00 0.00 4.79
1414 1514 4.335584 CTCGATCGAGAGGCGGGC 62.336 72.222 36.13 0.00 44.53 6.13
1539 2249 4.466370 TGCTCTTATATTATGGGACGGAGG 59.534 45.833 0.00 0.00 0.00 4.30
1543 2253 8.553459 AGAAAATGCTCTTATATTATGGGACG 57.447 34.615 0.00 0.00 0.00 4.79
1557 2267 7.607991 CCGTCCCATAATATAAGAAAATGCTCT 59.392 37.037 0.00 0.00 0.00 4.09
1560 2270 7.148239 CCTCCGTCCCATAATATAAGAAAATGC 60.148 40.741 0.00 0.00 0.00 3.56
1561 2271 7.336931 CCCTCCGTCCCATAATATAAGAAAATG 59.663 40.741 0.00 0.00 0.00 2.32
1567 2277 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1570 2280 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1572 2282 2.606378 GTACTCCCTCCGTCCCATAAT 58.394 52.381 0.00 0.00 0.00 1.28
1573 2283 1.412074 GGTACTCCCTCCGTCCCATAA 60.412 57.143 0.00 0.00 0.00 1.90
1574 2284 0.186873 GGTACTCCCTCCGTCCCATA 59.813 60.000 0.00 0.00 0.00 2.74
1575 2285 1.075450 GGTACTCCCTCCGTCCCAT 60.075 63.158 0.00 0.00 0.00 4.00
1577 2287 0.482006 ATAGGTACTCCCTCCGTCCC 59.518 60.000 0.00 0.00 44.81 4.46
1578 2288 2.378378 AATAGGTACTCCCTCCGTCC 57.622 55.000 0.00 0.00 44.81 4.79
1579 2289 4.097551 AGTAATAGGTACTCCCTCCGTC 57.902 50.000 0.00 0.00 44.81 4.79
1589 2299 5.994668 ACTACGTAGCTGGAGTAATAGGTAC 59.005 44.000 22.40 0.00 33.49 3.34
1603 2313 0.585357 CGCATCGGTACTACGTAGCT 59.415 55.000 22.40 11.95 34.78 3.32
1607 2317 1.590932 AGATCGCATCGGTACTACGT 58.409 50.000 0.00 0.00 34.94 3.57
1608 2318 4.565962 AGTATAGATCGCATCGGTACTACG 59.434 45.833 0.00 0.00 34.72 3.51
1610 2320 5.114780 GGAGTATAGATCGCATCGGTACTA 58.885 45.833 0.00 0.00 35.77 1.82
1611 2321 3.940221 GGAGTATAGATCGCATCGGTACT 59.060 47.826 11.94 11.94 37.19 2.73
1626 2341 5.570205 TTTGTGGTGGAAGTTGGAGTATA 57.430 39.130 0.00 0.00 0.00 1.47
1627 2342 4.447138 TTTGTGGTGGAAGTTGGAGTAT 57.553 40.909 0.00 0.00 0.00 2.12
1628 2343 3.935818 TTTGTGGTGGAAGTTGGAGTA 57.064 42.857 0.00 0.00 0.00 2.59
1646 2361 6.335777 GGCTATCTGCACTTGAATCAATTTT 58.664 36.000 0.00 0.00 45.15 1.82
1656 2371 2.528743 CGCCGGCTATCTGCACTTG 61.529 63.158 26.68 0.00 45.15 3.16
1691 2410 1.327764 GACAGCCCGCGAATTAAGAAG 59.672 52.381 8.23 0.00 0.00 2.85
1717 2436 2.348888 ACCGCCTACGAGAACCAGG 61.349 63.158 0.00 0.00 43.93 4.45
1721 2440 2.508663 GCCACCGCCTACGAGAAC 60.509 66.667 0.00 0.00 43.93 3.01
1742 2486 3.589988 AGACAACATAGAAAGTCAGCGG 58.410 45.455 0.00 0.00 33.56 5.52
1769 2529 1.471119 AAGAACTGGCGATCGAGGTA 58.529 50.000 21.57 0.00 0.00 3.08
1770 2530 1.471119 TAAGAACTGGCGATCGAGGT 58.529 50.000 21.57 6.70 0.00 3.85
2025 3767 0.247736 GTCATCTGTCCGCCAAGAGT 59.752 55.000 0.00 0.00 0.00 3.24
2090 3851 1.598130 AGCCAAGGTCGTTCTGTGC 60.598 57.895 0.00 0.00 0.00 4.57
2094 3855 1.071471 CCACAGCCAAGGTCGTTCT 59.929 57.895 0.00 0.00 0.00 3.01
2111 3872 0.461961 ATCGACTTCTAGTGCCAGCC 59.538 55.000 0.00 0.00 0.00 4.85
2208 3973 1.112459 CAAACGCTTGCACGAAGAAC 58.888 50.000 3.48 0.00 36.70 3.01
2234 3999 0.323178 AATCTGGGGCAGCTTGAGTG 60.323 55.000 0.00 0.00 0.00 3.51
2239 4004 2.753043 CGCAATCTGGGGCAGCTT 60.753 61.111 0.00 0.00 0.00 3.74
2297 4100 3.066064 TCCAAACGTTGTCATCAAACCAG 59.934 43.478 0.00 0.00 35.20 4.00
2363 4166 7.951530 ACAAGAAATTATCAACTTTTGGCAG 57.048 32.000 0.00 0.00 0.00 4.85
2383 4186 8.672823 ACCAACTTTTCTTACTAACCTACAAG 57.327 34.615 0.00 0.00 0.00 3.16
2393 4196 7.299246 TGACTAGCTACCAACTTTTCTTACT 57.701 36.000 0.00 0.00 0.00 2.24
2414 4217 3.000727 ACGTTGGCTAGCAGTAATTGAC 58.999 45.455 18.24 2.00 0.00 3.18
2475 4278 7.137426 GTGACATATAAAGTACGATCGGTTCT 58.863 38.462 20.98 11.24 0.00 3.01
2481 4284 9.687210 TTGGTATGTGACATATAAAGTACGATC 57.313 33.333 8.72 0.00 0.00 3.69
2485 4288 7.306983 GCCGTTGGTATGTGACATATAAAGTAC 60.307 40.741 8.72 0.00 0.00 2.73
2508 4311 2.009774 CAGTCCCAAATTGACTAGCCG 58.990 52.381 0.00 0.00 41.02 5.52
2589 4395 3.643159 TGTGTGACTGTACTGTGCTAG 57.357 47.619 10.43 0.00 0.00 3.42
2627 4434 9.490379 CACTTTCTTGTTAACTTATACTCCTGT 57.510 33.333 7.22 0.00 0.00 4.00
2628 4435 9.490379 ACACTTTCTTGTTAACTTATACTCCTG 57.510 33.333 7.22 0.00 0.00 3.86
2904 5909 4.000988 CCGACAGTAGCAAAAATGTAGGT 58.999 43.478 5.66 0.00 34.76 3.08
3001 6108 1.381599 CCTCAGCAGCTCCTCCTCT 60.382 63.158 0.00 0.00 0.00 3.69
3157 6276 3.743521 CATGAACTTGAGGGAGTTGTGA 58.256 45.455 0.00 0.00 39.84 3.58
3390 6519 9.291664 GCTACAGATAATAATATCCGAGAACAC 57.708 37.037 0.00 0.00 39.02 3.32
3414 6543 3.322828 AGCACAAATTGATCAACCAAGCT 59.677 39.130 11.07 13.38 0.00 3.74
3450 6584 3.286751 CACCCTGCAACACCACCG 61.287 66.667 0.00 0.00 0.00 4.94
3479 6616 1.630878 GAATCACCCTTCACCCTCACT 59.369 52.381 0.00 0.00 0.00 3.41
3509 6646 0.324943 ACTTGAACCCCAGATCCACG 59.675 55.000 0.00 0.00 0.00 4.94
3526 6663 3.248024 TCCTCCACACCATACTTGAACT 58.752 45.455 0.00 0.00 0.00 3.01
3618 6778 3.389925 TCTTTTCGACGGTACATGGTT 57.610 42.857 0.00 0.00 0.00 3.67
3619 6779 3.389925 TTCTTTTCGACGGTACATGGT 57.610 42.857 0.00 0.00 0.00 3.55
3620 6780 3.120442 GGTTTCTTTTCGACGGTACATGG 60.120 47.826 0.00 0.00 0.00 3.66
3621 6781 3.120442 GGGTTTCTTTTCGACGGTACATG 60.120 47.826 0.00 0.00 0.00 3.21
3622 6782 3.069289 GGGTTTCTTTTCGACGGTACAT 58.931 45.455 0.00 0.00 0.00 2.29
3623 6783 2.158986 TGGGTTTCTTTTCGACGGTACA 60.159 45.455 0.00 0.00 0.00 2.90
3624 6784 2.477754 CTGGGTTTCTTTTCGACGGTAC 59.522 50.000 0.00 0.00 0.00 3.34
3625 6785 2.548493 CCTGGGTTTCTTTTCGACGGTA 60.548 50.000 0.00 0.00 0.00 4.02
3626 6786 1.589803 CTGGGTTTCTTTTCGACGGT 58.410 50.000 0.00 0.00 0.00 4.83
3627 6787 0.872388 CCTGGGTTTCTTTTCGACGG 59.128 55.000 0.00 0.00 0.00 4.79
3628 6788 0.872388 CCCTGGGTTTCTTTTCGACG 59.128 55.000 3.97 0.00 0.00 5.12
3629 6789 2.265589 TCCCTGGGTTTCTTTTCGAC 57.734 50.000 13.56 0.00 0.00 4.20
3630 6790 3.300239 TTTCCCTGGGTTTCTTTTCGA 57.700 42.857 13.56 0.00 0.00 3.71
3631 6791 3.491964 GGTTTTCCCTGGGTTTCTTTTCG 60.492 47.826 13.56 0.00 0.00 3.46
3632 6792 3.452990 TGGTTTTCCCTGGGTTTCTTTTC 59.547 43.478 13.56 0.00 39.73 2.29
3633 6793 3.455849 TGGTTTTCCCTGGGTTTCTTTT 58.544 40.909 13.56 0.00 39.73 2.27
3634 6794 3.123392 TGGTTTTCCCTGGGTTTCTTT 57.877 42.857 13.56 0.00 39.73 2.52
3635 6795 2.858787 TGGTTTTCCCTGGGTTTCTT 57.141 45.000 13.56 0.00 39.73 2.52
3636 6796 2.769663 GTTTGGTTTTCCCTGGGTTTCT 59.230 45.455 13.56 0.00 39.73 2.52
3637 6797 2.769663 AGTTTGGTTTTCCCTGGGTTTC 59.230 45.455 13.56 2.28 39.73 2.78
3696 6879 1.473677 CTTCAAATTCATGCGGGCTGA 59.526 47.619 0.00 0.00 0.00 4.26
3734 6918 4.909305 GGACACATTACACAATGAACAACG 59.091 41.667 4.46 0.00 43.67 4.10
3769 6959 1.597937 GCAACTGGCGAGAAAACACAG 60.598 52.381 1.44 0.00 35.40 3.66
3850 7044 9.173021 CAGACTATACAACCCATTTTATGTTGA 57.827 33.333 8.44 0.00 41.38 3.18
3863 7057 7.553334 TGGTATGAGTTTCAGACTATACAACC 58.447 38.462 4.14 0.00 38.55 3.77
3875 7069 9.431887 GTGTACTTTCTAATGGTATGAGTTTCA 57.568 33.333 0.00 0.00 0.00 2.69
3876 7070 8.592998 CGTGTACTTTCTAATGGTATGAGTTTC 58.407 37.037 0.00 0.00 0.00 2.78
3943 7137 9.701098 GGTTGATAAATAGACCGACATAATACA 57.299 33.333 0.00 0.00 0.00 2.29
3944 7138 9.924650 AGGTTGATAAATAGACCGACATAATAC 57.075 33.333 0.00 0.00 37.26 1.89
3948 7142 9.976511 CTTTAGGTTGATAAATAGACCGACATA 57.023 33.333 0.00 0.00 37.26 2.29
3949 7143 8.701895 TCTTTAGGTTGATAAATAGACCGACAT 58.298 33.333 0.00 0.00 37.26 3.06
3950 7144 8.070034 TCTTTAGGTTGATAAATAGACCGACA 57.930 34.615 0.00 0.00 37.26 4.35
3953 7147 9.125906 CGTATCTTTAGGTTGATAAATAGACCG 57.874 37.037 0.00 0.00 37.26 4.79
3954 7148 8.923683 GCGTATCTTTAGGTTGATAAATAGACC 58.076 37.037 0.00 0.00 0.00 3.85
3955 7149 9.472361 TGCGTATCTTTAGGTTGATAAATAGAC 57.528 33.333 0.00 0.00 0.00 2.59
3956 7150 9.472361 GTGCGTATCTTTAGGTTGATAAATAGA 57.528 33.333 0.00 0.00 0.00 1.98
3957 7151 9.256477 TGTGCGTATCTTTAGGTTGATAAATAG 57.744 33.333 0.00 0.00 0.00 1.73
3958 7152 9.602568 TTGTGCGTATCTTTAGGTTGATAAATA 57.397 29.630 0.00 0.00 0.00 1.40
3959 7153 8.395633 GTTGTGCGTATCTTTAGGTTGATAAAT 58.604 33.333 0.00 0.00 0.00 1.40
3960 7154 7.148373 GGTTGTGCGTATCTTTAGGTTGATAAA 60.148 37.037 0.00 0.00 0.00 1.40
3961 7155 6.314400 GGTTGTGCGTATCTTTAGGTTGATAA 59.686 38.462 0.00 0.00 0.00 1.75
3962 7156 5.813672 GGTTGTGCGTATCTTTAGGTTGATA 59.186 40.000 0.00 0.00 0.00 2.15
3963 7157 4.634443 GGTTGTGCGTATCTTTAGGTTGAT 59.366 41.667 0.00 0.00 0.00 2.57
3964 7158 3.998341 GGTTGTGCGTATCTTTAGGTTGA 59.002 43.478 0.00 0.00 0.00 3.18
3965 7159 3.126343 GGGTTGTGCGTATCTTTAGGTTG 59.874 47.826 0.00 0.00 0.00 3.77
3966 7160 3.008704 AGGGTTGTGCGTATCTTTAGGTT 59.991 43.478 0.00 0.00 0.00 3.50
3967 7161 2.570302 AGGGTTGTGCGTATCTTTAGGT 59.430 45.455 0.00 0.00 0.00 3.08
3968 7162 3.261981 AGGGTTGTGCGTATCTTTAGG 57.738 47.619 0.00 0.00 0.00 2.69
3969 7163 8.428186 TTTATAAGGGTTGTGCGTATCTTTAG 57.572 34.615 0.00 0.00 0.00 1.85
3970 7164 8.967664 ATTTATAAGGGTTGTGCGTATCTTTA 57.032 30.769 0.00 0.00 0.00 1.85
3971 7165 7.254658 CGATTTATAAGGGTTGTGCGTATCTTT 60.255 37.037 0.00 0.00 0.00 2.52
3972 7166 6.202188 CGATTTATAAGGGTTGTGCGTATCTT 59.798 38.462 0.00 0.00 0.00 2.40
3973 7167 5.694910 CGATTTATAAGGGTTGTGCGTATCT 59.305 40.000 0.00 0.00 0.00 1.98
3974 7168 5.107220 CCGATTTATAAGGGTTGTGCGTATC 60.107 44.000 0.00 0.00 0.00 2.24
3975 7169 4.753107 CCGATTTATAAGGGTTGTGCGTAT 59.247 41.667 0.00 0.00 0.00 3.06
3976 7170 4.121317 CCGATTTATAAGGGTTGTGCGTA 58.879 43.478 0.00 0.00 0.00 4.42
3977 7171 2.940410 CCGATTTATAAGGGTTGTGCGT 59.060 45.455 0.00 0.00 0.00 5.24
3978 7172 3.199677 TCCGATTTATAAGGGTTGTGCG 58.800 45.455 0.00 0.00 0.00 5.34
3979 7173 5.570234 TTTCCGATTTATAAGGGTTGTGC 57.430 39.130 0.00 0.00 0.00 4.57
3980 7174 8.349983 CCTTATTTCCGATTTATAAGGGTTGTG 58.650 37.037 10.78 0.00 43.54 3.33
3981 7175 8.459911 CCTTATTTCCGATTTATAAGGGTTGT 57.540 34.615 10.78 0.00 43.54 3.32
3996 7190 9.017669 GCAATATACGATACTACCTTATTTCCG 57.982 37.037 0.00 0.00 0.00 4.30
3997 7191 9.017669 CGCAATATACGATACTACCTTATTTCC 57.982 37.037 0.00 0.00 0.00 3.13
3998 7192 9.565213 ACGCAATATACGATACTACCTTATTTC 57.435 33.333 5.18 0.00 0.00 2.17
3999 7193 9.350357 CACGCAATATACGATACTACCTTATTT 57.650 33.333 5.18 0.00 0.00 1.40
4000 7194 8.517878 ACACGCAATATACGATACTACCTTATT 58.482 33.333 5.18 0.00 0.00 1.40
4001 7195 8.048534 ACACGCAATATACGATACTACCTTAT 57.951 34.615 5.18 0.00 0.00 1.73
4002 7196 7.439157 ACACGCAATATACGATACTACCTTA 57.561 36.000 5.18 0.00 0.00 2.69
4003 7197 6.323203 ACACGCAATATACGATACTACCTT 57.677 37.500 5.18 0.00 0.00 3.50
4004 7198 5.954296 ACACGCAATATACGATACTACCT 57.046 39.130 5.18 0.00 0.00 3.08
4005 7199 6.998258 AAACACGCAATATACGATACTACC 57.002 37.500 5.18 0.00 0.00 3.18
4006 7200 9.173939 ACTAAAACACGCAATATACGATACTAC 57.826 33.333 5.18 0.00 0.00 2.73
4008 7202 9.390795 CTACTAAAACACGCAATATACGATACT 57.609 33.333 5.18 0.00 0.00 2.12
4009 7203 9.173939 ACTACTAAAACACGCAATATACGATAC 57.826 33.333 5.18 0.00 0.00 2.24
4010 7204 9.734620 AACTACTAAAACACGCAATATACGATA 57.265 29.630 5.18 0.00 0.00 2.92
4011 7205 8.638685 AACTACTAAAACACGCAATATACGAT 57.361 30.769 5.18 0.00 0.00 3.73
4012 7206 8.374728 CAAACTACTAAAACACGCAATATACGA 58.625 33.333 5.18 0.00 0.00 3.43
4013 7207 8.374728 TCAAACTACTAAAACACGCAATATACG 58.625 33.333 0.00 0.00 0.00 3.06
4016 7210 9.953697 TTTTCAAACTACTAAAACACGCAATAT 57.046 25.926 0.00 0.00 0.00 1.28
4017 7211 9.440784 CTTTTCAAACTACTAAAACACGCAATA 57.559 29.630 0.00 0.00 0.00 1.90
4018 7212 7.043656 GCTTTTCAAACTACTAAAACACGCAAT 60.044 33.333 0.00 0.00 0.00 3.56
4019 7213 6.251801 GCTTTTCAAACTACTAAAACACGCAA 59.748 34.615 0.00 0.00 0.00 4.85
4020 7214 5.740099 GCTTTTCAAACTACTAAAACACGCA 59.260 36.000 0.00 0.00 0.00 5.24
4021 7215 5.108891 CGCTTTTCAAACTACTAAAACACGC 60.109 40.000 0.00 0.00 0.00 5.34
4022 7216 6.186785 TCGCTTTTCAAACTACTAAAACACG 58.813 36.000 0.00 0.00 0.00 4.49
4023 7217 7.958112 TTCGCTTTTCAAACTACTAAAACAC 57.042 32.000 0.00 0.00 0.00 3.32
4024 7218 9.228636 GATTTCGCTTTTCAAACTACTAAAACA 57.771 29.630 0.00 0.00 0.00 2.83
4025 7219 9.228636 TGATTTCGCTTTTCAAACTACTAAAAC 57.771 29.630 0.00 0.00 0.00 2.43
4026 7220 9.228636 GTGATTTCGCTTTTCAAACTACTAAAA 57.771 29.630 0.00 0.00 0.00 1.52
4027 7221 8.399425 TGTGATTTCGCTTTTCAAACTACTAAA 58.601 29.630 0.00 0.00 0.00 1.85
4028 7222 7.921787 TGTGATTTCGCTTTTCAAACTACTAA 58.078 30.769 0.00 0.00 0.00 2.24
4029 7223 7.485418 TGTGATTTCGCTTTTCAAACTACTA 57.515 32.000 0.00 0.00 0.00 1.82
4030 7224 6.371809 TGTGATTTCGCTTTTCAAACTACT 57.628 33.333 0.00 0.00 0.00 2.57
4031 7225 6.691388 ACTTGTGATTTCGCTTTTCAAACTAC 59.309 34.615 0.00 0.00 0.00 2.73
4032 7226 6.791303 ACTTGTGATTTCGCTTTTCAAACTA 58.209 32.000 0.00 0.00 0.00 2.24
4033 7227 5.650543 ACTTGTGATTTCGCTTTTCAAACT 58.349 33.333 0.00 0.00 0.00 2.66
4034 7228 5.949233 ACTTGTGATTTCGCTTTTCAAAC 57.051 34.783 0.00 0.00 0.00 2.93
4035 7229 7.221838 CCTTAACTTGTGATTTCGCTTTTCAAA 59.778 33.333 0.00 0.00 0.00 2.69
4036 7230 6.695278 CCTTAACTTGTGATTTCGCTTTTCAA 59.305 34.615 0.00 0.00 0.00 2.69
4037 7231 6.038825 TCCTTAACTTGTGATTTCGCTTTTCA 59.961 34.615 0.00 0.00 0.00 2.69
4038 7232 6.435428 TCCTTAACTTGTGATTTCGCTTTTC 58.565 36.000 0.00 0.00 0.00 2.29
4039 7233 6.039382 ACTCCTTAACTTGTGATTTCGCTTTT 59.961 34.615 0.00 0.00 0.00 2.27
4040 7234 5.531287 ACTCCTTAACTTGTGATTTCGCTTT 59.469 36.000 0.00 0.00 0.00 3.51
4041 7235 5.063880 ACTCCTTAACTTGTGATTTCGCTT 58.936 37.500 0.00 0.00 0.00 4.68
4042 7236 4.642429 ACTCCTTAACTTGTGATTTCGCT 58.358 39.130 0.00 0.00 0.00 4.93
4043 7237 5.638234 AGTACTCCTTAACTTGTGATTTCGC 59.362 40.000 0.00 0.00 0.00 4.70
4044 7238 6.310711 GGAGTACTCCTTAACTTGTGATTTCG 59.689 42.308 31.12 0.00 46.16 3.46
4045 7239 7.598189 GGAGTACTCCTTAACTTGTGATTTC 57.402 40.000 31.12 1.68 46.16 2.17
4072 7266 3.242543 CGCAAGATAGGAGTGATGTTTGC 60.243 47.826 0.00 0.00 43.02 3.68
4093 7287 1.944676 GTCACTTATCGCGGCCTCG 60.945 63.158 9.35 9.35 39.81 4.63
4094 7288 1.944676 CGTCACTTATCGCGGCCTC 60.945 63.158 6.13 0.00 0.00 4.70
4102 7296 3.841372 GCACATAAAGCGCGTCACTTATC 60.841 47.826 8.43 0.00 0.00 1.75
4104 7298 1.392168 GCACATAAAGCGCGTCACTTA 59.608 47.619 8.43 0.79 0.00 2.24
4112 7306 2.179589 CAAGTGATGCACATAAAGCGC 58.820 47.619 0.00 0.00 36.74 5.92
4125 7319 3.008813 ACTCTCAGATTGCCACAAGTGAT 59.991 43.478 0.94 0.00 0.00 3.06
4132 7326 4.322567 AGAGAAAACTCTCAGATTGCCAC 58.677 43.478 5.03 0.00 39.12 5.01
4134 7328 5.956068 AAAGAGAAAACTCTCAGATTGCC 57.044 39.130 5.03 0.00 39.12 4.52
4139 7333 7.713750 TCTACGAAAAAGAGAAAACTCTCAGA 58.286 34.615 5.03 0.00 39.12 3.27
4140 7334 7.932120 TCTACGAAAAAGAGAAAACTCTCAG 57.068 36.000 5.03 0.00 39.12 3.35
4141 7335 8.888579 AATCTACGAAAAAGAGAAAACTCTCA 57.111 30.769 5.03 0.00 39.12 3.27
4142 7336 8.157183 CGAATCTACGAAAAAGAGAAAACTCTC 58.843 37.037 0.00 0.00 34.79 3.20
4143 7337 7.652507 ACGAATCTACGAAAAAGAGAAAACTCT 59.347 33.333 0.00 0.00 37.03 3.24
4180 7374 4.751098 ACGCACGGTTTAAGAGATAAAACA 59.249 37.500 0.00 0.00 40.57 2.83
4181 7375 5.273523 ACGCACGGTTTAAGAGATAAAAC 57.726 39.130 0.00 0.00 37.75 2.43
4201 7395 5.503498 TGAAAACGGTTTCAGATTTGTACG 58.497 37.500 24.28 0.00 46.48 3.67
4212 7406 6.389906 AGAATCCAATGATGAAAACGGTTTC 58.610 36.000 19.09 19.09 43.04 2.78
4213 7407 6.345096 AGAATCCAATGATGAAAACGGTTT 57.655 33.333 0.00 0.00 0.00 3.27
4216 7410 5.030295 CGAAGAATCCAATGATGAAAACGG 58.970 41.667 0.00 0.00 0.00 4.44
4217 7411 4.496895 GCGAAGAATCCAATGATGAAAACG 59.503 41.667 0.00 0.00 0.00 3.60
4223 7417 2.347939 CGACGCGAAGAATCCAATGATG 60.348 50.000 15.93 0.00 0.00 3.07
4227 7421 1.134367 TCTCGACGCGAAGAATCCAAT 59.866 47.619 15.93 0.00 34.74 3.16
4239 7433 6.134787 GATCTAATTTGAAGATCTCGACGC 57.865 41.667 8.78 0.00 43.96 5.19
4298 7493 4.641094 AGTTCTCGTGATTTCGTCCTATCT 59.359 41.667 0.00 0.00 0.00 1.98
4302 7497 4.778534 TTAGTTCTCGTGATTTCGTCCT 57.221 40.909 0.00 0.00 0.00 3.85
4306 7501 6.414079 CATGGATTTAGTTCTCGTGATTTCG 58.586 40.000 0.00 0.00 0.00 3.46
4307 7502 6.195165 GCATGGATTTAGTTCTCGTGATTTC 58.805 40.000 0.00 0.00 0.00 2.17
4320 7515 1.605710 CCGCAAGAGGCATGGATTTAG 59.394 52.381 0.00 0.00 45.17 1.85
4328 7523 4.819783 TTGTTCCGCAAGAGGCAT 57.180 50.000 0.00 0.00 45.17 4.40
4366 7561 0.248825 CGATCGTGCCTCTTGGAGAG 60.249 60.000 7.03 0.00 41.96 3.20
4370 7565 0.527817 GGTACGATCGTGCCTCTTGG 60.528 60.000 38.12 1.86 45.50 3.61
4371 7566 2.959275 GGTACGATCGTGCCTCTTG 58.041 57.895 38.12 2.60 45.50 3.02
4411 7606 2.564062 ACGGGTTTATTTCTCGTGGAGA 59.436 45.455 0.00 0.00 36.86 3.71
4423 7618 1.024579 CGCAAGAGGCACGGGTTTAT 61.025 55.000 0.00 0.00 45.17 1.40
4428 7623 4.697756 TTCCGCAAGAGGCACGGG 62.698 66.667 0.30 0.00 46.87 5.28
4485 7682 1.672356 CTTCTGTGGGAAGCACGGG 60.672 63.158 0.00 0.00 43.88 5.28
4492 7689 1.202879 ACGGATTTGCTTCTGTGGGAA 60.203 47.619 0.00 0.00 33.94 3.97
4493 7690 0.400213 ACGGATTTGCTTCTGTGGGA 59.600 50.000 0.00 0.00 33.94 4.37
4499 7696 1.679032 GGTAGGCACGGATTTGCTTCT 60.679 52.381 0.00 0.00 42.56 2.85
4510 7707 2.403252 ATTTCCTTCAGGTAGGCACG 57.597 50.000 0.00 0.00 35.15 5.34
4520 7717 4.968719 TGTCTCTAGGGCATATTTCCTTCA 59.031 41.667 0.00 0.00 34.75 3.02
4521 7718 5.071115 ACTGTCTCTAGGGCATATTTCCTTC 59.929 44.000 0.00 0.00 34.75 3.46
4522 7719 4.971924 ACTGTCTCTAGGGCATATTTCCTT 59.028 41.667 0.00 0.00 34.75 3.36
4523 7720 4.561752 ACTGTCTCTAGGGCATATTTCCT 58.438 43.478 0.00 0.00 37.18 3.36
4524 7721 4.965200 ACTGTCTCTAGGGCATATTTCC 57.035 45.455 0.00 0.00 0.00 3.13
4525 7722 9.998106 TTTATTACTGTCTCTAGGGCATATTTC 57.002 33.333 0.00 0.00 0.00 2.17
4527 7724 9.160412 ACTTTATTACTGTCTCTAGGGCATATT 57.840 33.333 0.00 0.00 0.00 1.28
4528 7725 8.728596 ACTTTATTACTGTCTCTAGGGCATAT 57.271 34.615 0.00 0.00 0.00 1.78
4529 7726 8.421784 CAACTTTATTACTGTCTCTAGGGCATA 58.578 37.037 0.00 0.00 0.00 3.14
4530 7727 7.092846 ACAACTTTATTACTGTCTCTAGGGCAT 60.093 37.037 0.00 0.00 0.00 4.40
4531 7728 6.212791 ACAACTTTATTACTGTCTCTAGGGCA 59.787 38.462 0.00 0.00 0.00 5.36
4532 7729 6.641474 ACAACTTTATTACTGTCTCTAGGGC 58.359 40.000 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.