Multiple sequence alignment - TraesCS2D01G184900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G184900 | chr2D | 100.000 | 2791 | 0 | 0 | 1 | 2791 | 129958142 | 129960932 | 0.000000e+00 | 5155.0 |
1 | TraesCS2D01G184900 | chr2D | 92.025 | 163 | 13 | 0 | 2036 | 2198 | 56541150 | 56540988 | 2.160000e-56 | 230.0 |
2 | TraesCS2D01G184900 | chr2D | 89.385 | 179 | 17 | 2 | 2017 | 2194 | 445733845 | 445733668 | 1.010000e-54 | 224.0 |
3 | TraesCS2D01G184900 | chr2D | 88.889 | 180 | 19 | 1 | 2020 | 2198 | 305514858 | 305515037 | 1.300000e-53 | 220.0 |
4 | TraesCS2D01G184900 | chr2D | 79.139 | 302 | 24 | 12 | 530 | 796 | 129911736 | 129912033 | 3.700000e-39 | 172.0 |
5 | TraesCS2D01G184900 | chr2D | 82.000 | 200 | 33 | 3 | 37 | 235 | 304707434 | 304707237 | 1.720000e-37 | 167.0 |
6 | TraesCS2D01G184900 | chr2D | 81.726 | 197 | 30 | 4 | 1110 | 1300 | 136181509 | 136181313 | 2.880000e-35 | 159.0 |
7 | TraesCS2D01G184900 | chr2D | 80.714 | 140 | 21 | 4 | 1101 | 1234 | 129799225 | 129799364 | 1.370000e-18 | 104.0 |
8 | TraesCS2D01G184900 | chr2D | 81.102 | 127 | 18 | 4 | 1114 | 1234 | 129789317 | 129789443 | 2.290000e-16 | 97.1 |
9 | TraesCS2D01G184900 | chr2D | 89.706 | 68 | 7 | 0 | 1114 | 1181 | 129353140 | 129353207 | 1.380000e-13 | 87.9 |
10 | TraesCS2D01G184900 | chr2B | 93.548 | 930 | 51 | 3 | 961 | 1887 | 183313926 | 183314849 | 0.000000e+00 | 1376.0 |
11 | TraesCS2D01G184900 | chr2B | 90.057 | 523 | 25 | 5 | 2293 | 2791 | 183315052 | 183315571 | 0.000000e+00 | 652.0 |
12 | TraesCS2D01G184900 | chr2B | 86.574 | 216 | 22 | 4 | 214 | 429 | 183309124 | 183309332 | 6.010000e-57 | 231.0 |
13 | TraesCS2D01G184900 | chr2B | 93.043 | 115 | 7 | 1 | 558 | 671 | 183311691 | 183311805 | 1.720000e-37 | 167.0 |
14 | TraesCS2D01G184900 | chr2B | 91.176 | 68 | 6 | 0 | 1114 | 1181 | 182936470 | 182936537 | 2.960000e-15 | 93.5 |
15 | TraesCS2D01G184900 | chr2A | 90.233 | 901 | 48 | 4 | 990 | 1887 | 136163261 | 136164124 | 0.000000e+00 | 1140.0 |
16 | TraesCS2D01G184900 | chr2A | 88.300 | 641 | 61 | 6 | 1017 | 1650 | 136161037 | 136161670 | 0.000000e+00 | 756.0 |
17 | TraesCS2D01G184900 | chr2A | 82.995 | 788 | 86 | 20 | 1 | 771 | 136159891 | 136160647 | 0.000000e+00 | 669.0 |
18 | TraesCS2D01G184900 | chr2A | 85.417 | 528 | 27 | 19 | 2293 | 2791 | 136164327 | 136164833 | 1.150000e-138 | 503.0 |
19 | TraesCS2D01G184900 | chr2A | 84.599 | 461 | 41 | 18 | 2201 | 2647 | 136162122 | 136162566 | 5.520000e-117 | 431.0 |
20 | TraesCS2D01G184900 | chr2A | 90.311 | 289 | 22 | 2 | 558 | 840 | 136162791 | 136163079 | 9.440000e-100 | 374.0 |
21 | TraesCS2D01G184900 | chr2A | 86.344 | 227 | 23 | 2 | 253 | 472 | 136162571 | 136162796 | 9.990000e-60 | 241.0 |
22 | TraesCS2D01G184900 | chr6D | 82.192 | 292 | 47 | 5 | 30 | 319 | 372808349 | 372808637 | 2.150000e-61 | 246.0 |
23 | TraesCS2D01G184900 | chr6D | 88.770 | 187 | 19 | 2 | 2028 | 2214 | 15801273 | 15801089 | 7.780000e-56 | 228.0 |
24 | TraesCS2D01G184900 | chr6D | 90.286 | 175 | 15 | 2 | 2021 | 2195 | 229431059 | 229430887 | 7.780000e-56 | 228.0 |
25 | TraesCS2D01G184900 | chr4B | 93.631 | 157 | 10 | 0 | 2036 | 2192 | 483266534 | 483266378 | 4.650000e-58 | 235.0 |
26 | TraesCS2D01G184900 | chr7B | 90.698 | 172 | 16 | 0 | 2022 | 2193 | 561750782 | 561750611 | 2.160000e-56 | 230.0 |
27 | TraesCS2D01G184900 | chr7D | 85.455 | 220 | 29 | 3 | 30 | 248 | 585422174 | 585421957 | 2.800000e-55 | 226.0 |
28 | TraesCS2D01G184900 | chrUn | 90.643 | 171 | 12 | 4 | 2036 | 2206 | 31220651 | 31220485 | 1.010000e-54 | 224.0 |
29 | TraesCS2D01G184900 | chr4D | 88.298 | 188 | 16 | 5 | 2026 | 2208 | 81667559 | 81667745 | 1.300000e-53 | 220.0 |
30 | TraesCS2D01G184900 | chr3D | 78.125 | 96 | 15 | 5 | 338 | 431 | 123616157 | 123616248 | 3.880000e-04 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G184900 | chr2D | 129958142 | 129960932 | 2790 | False | 5155.000000 | 5155 | 100.000000 | 1 | 2791 | 1 | chr2D.!!$F5 | 2790 |
1 | TraesCS2D01G184900 | chr2B | 183309124 | 183315571 | 6447 | False | 606.500000 | 1376 | 90.805500 | 214 | 2791 | 4 | chr2B.!!$F2 | 2577 |
2 | TraesCS2D01G184900 | chr2A | 136159891 | 136164833 | 4942 | False | 587.714286 | 1140 | 86.885571 | 1 | 2791 | 7 | chr2A.!!$F1 | 2790 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
998 | 6285 | 0.033228 | CGAGCAGGGGAATCTAGCAG | 59.967 | 60.0 | 0.0 | 0.0 | 0.0 | 4.24 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1924 | 7214 | 0.032952 | GACAGACCTACACCGTGCAA | 59.967 | 55.0 | 0.0 | 0.0 | 0.0 | 4.08 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
26 | 27 | 2.235016 | GTAATGTTGCCCTGGTGACAA | 58.765 | 47.619 | 0.00 | 0.00 | 42.06 | 3.18 |
30 | 31 | 0.603065 | GTTGCCCTGGTGACAAATCC | 59.397 | 55.000 | 0.00 | 0.00 | 42.06 | 3.01 |
60 | 61 | 1.667830 | CTGCCCAAAGCTTCGTCGA | 60.668 | 57.895 | 0.00 | 0.00 | 44.23 | 4.20 |
79 | 80 | 2.683933 | AAGGGGATCGAGTGCCGT | 60.684 | 61.111 | 0.00 | 0.00 | 39.69 | 5.68 |
98 | 99 | 3.061322 | CGTCACACTTATTCCAAACGGA | 58.939 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
120 | 121 | 0.036164 | CCGTCATCCCCAACTCAACA | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
144 | 145 | 0.389948 | CGCCAAGACCACTGACCTAC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
155 | 156 | 4.197750 | CCACTGACCTACTATCTACACGT | 58.802 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
157 | 158 | 4.874396 | CACTGACCTACTATCTACACGTCA | 59.126 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
158 | 159 | 5.353400 | CACTGACCTACTATCTACACGTCAA | 59.647 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
159 | 160 | 6.038382 | CACTGACCTACTATCTACACGTCAAT | 59.962 | 42.308 | 0.00 | 0.00 | 0.00 | 2.57 |
160 | 161 | 6.038382 | ACTGACCTACTATCTACACGTCAATG | 59.962 | 42.308 | 0.00 | 0.00 | 0.00 | 2.82 |
167 | 168 | 0.249120 | CTACACGTCAATGCCCCAGA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
169 | 170 | 0.908910 | ACACGTCAATGCCCCAGATA | 59.091 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
170 | 171 | 1.490490 | ACACGTCAATGCCCCAGATAT | 59.510 | 47.619 | 0.00 | 0.00 | 0.00 | 1.63 |
174 | 175 | 2.303022 | CGTCAATGCCCCAGATATAGGT | 59.697 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
176 | 177 | 4.729868 | GTCAATGCCCCAGATATAGGTTT | 58.270 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
181 | 182 | 2.716969 | GCCCCAGATATAGGTTTCCCTT | 59.283 | 50.000 | 0.00 | 0.00 | 42.66 | 3.95 |
196 | 197 | 2.507992 | CTTGCTCTCCTGCCGTCG | 60.508 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
200 | 201 | 4.200283 | CTCTCCTGCCGTCGGAGC | 62.200 | 72.222 | 17.49 | 0.06 | 46.11 | 4.70 |
251 | 252 | 2.186903 | CCAACGGCGGACTAGCAT | 59.813 | 61.111 | 13.24 | 0.00 | 39.27 | 3.79 |
265 | 266 | 4.202472 | GGACTAGCATAATTGGGTAGCCTT | 60.202 | 45.833 | 13.11 | 1.35 | 39.36 | 4.35 |
271 | 272 | 5.360999 | AGCATAATTGGGTAGCCTTCTTTTC | 59.639 | 40.000 | 13.11 | 0.00 | 0.00 | 2.29 |
309 | 310 | 0.038892 | GAGGAACCGCTTCGTGTGTA | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
410 | 412 | 6.863126 | GGTTTCAGATATGAAAGTTGTGGTTG | 59.137 | 38.462 | 15.54 | 0.00 | 38.32 | 3.77 |
434 | 436 | 1.639722 | TGAGGACATTTGAGGGACGA | 58.360 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
442 | 451 | 2.725203 | TTTGAGGGACGAGTTGGCGG | 62.725 | 60.000 | 0.00 | 0.00 | 35.12 | 6.13 |
459 | 468 | 2.751688 | GGAACGTGTAGGGGGCAA | 59.248 | 61.111 | 0.00 | 0.00 | 0.00 | 4.52 |
465 | 474 | 0.958876 | CGTGTAGGGGGCAAGGTTTC | 60.959 | 60.000 | 0.00 | 0.00 | 0.00 | 2.78 |
470 | 479 | 1.155155 | GGGGGCAAGGTTTCCTCAA | 59.845 | 57.895 | 0.00 | 0.00 | 30.89 | 3.02 |
474 | 483 | 0.811281 | GGCAAGGTTTCCTCAATCCG | 59.189 | 55.000 | 0.00 | 0.00 | 30.89 | 4.18 |
476 | 485 | 0.811281 | CAAGGTTTCCTCAATCCGGC | 59.189 | 55.000 | 0.00 | 0.00 | 30.89 | 6.13 |
477 | 486 | 0.323451 | AAGGTTTCCTCAATCCGGCC | 60.323 | 55.000 | 0.00 | 0.00 | 30.89 | 6.13 |
484 | 493 | 0.393077 | CCTCAATCCGGCCGTAGATT | 59.607 | 55.000 | 26.12 | 22.53 | 32.95 | 2.40 |
485 | 494 | 1.202651 | CCTCAATCCGGCCGTAGATTT | 60.203 | 52.381 | 26.12 | 6.92 | 30.29 | 2.17 |
487 | 496 | 2.544267 | CTCAATCCGGCCGTAGATTTTC | 59.456 | 50.000 | 26.12 | 0.00 | 30.29 | 2.29 |
496 | 505 | 4.267928 | CGGCCGTAGATTTTCTTAGAACAG | 59.732 | 45.833 | 19.50 | 0.00 | 0.00 | 3.16 |
546 | 555 | 5.885230 | TTATGTCTGCTTGGATCAACTTG | 57.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
554 | 563 | 3.304928 | GCTTGGATCAACTTGTCACAAGG | 60.305 | 47.826 | 21.71 | 5.01 | 35.60 | 3.61 |
556 | 565 | 1.197721 | GGATCAACTTGTCACAAGGCG | 59.802 | 52.381 | 21.71 | 11.78 | 0.00 | 5.52 |
587 | 4026 | 0.313672 | TGCGCAAAGTGAAATCCACC | 59.686 | 50.000 | 8.16 | 0.00 | 46.87 | 4.61 |
741 | 5555 | 2.107204 | ACACTTTCCTCAGTCAGCCATT | 59.893 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
743 | 5557 | 2.089980 | CTTTCCTCAGTCAGCCATTGG | 58.910 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
759 | 5573 | 0.107263 | TTGGCACAGCTTCTGTCACA | 60.107 | 50.000 | 0.00 | 0.00 | 43.43 | 3.58 |
760 | 5574 | 0.107263 | TGGCACAGCTTCTGTCACAA | 60.107 | 50.000 | 0.00 | 0.00 | 43.43 | 3.33 |
774 | 5588 | 1.135689 | GTCACAACGCCATAAAGCCAG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
836 | 5971 | 3.364441 | GCGTTGCACATGGGCAGA | 61.364 | 61.111 | 23.95 | 11.61 | 45.88 | 4.26 |
840 | 5975 | 0.890542 | GTTGCACATGGGCAGAGTCA | 60.891 | 55.000 | 23.95 | 4.68 | 45.88 | 3.41 |
844 | 5979 | 1.340889 | GCACATGGGCAGAGTCAAAAA | 59.659 | 47.619 | 16.99 | 0.00 | 0.00 | 1.94 |
848 | 5983 | 2.727123 | TGGGCAGAGTCAAAAACAGA | 57.273 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
853 | 5988 | 2.604132 | GCAGAGTCAAAAACAGAGCTGC | 60.604 | 50.000 | 0.00 | 0.00 | 40.34 | 5.25 |
855 | 5990 | 3.065786 | CAGAGTCAAAAACAGAGCTGCAA | 59.934 | 43.478 | 1.02 | 0.00 | 0.00 | 4.08 |
863 | 5998 | 1.818642 | ACAGAGCTGCAATCAAGACC | 58.181 | 50.000 | 1.02 | 0.00 | 0.00 | 3.85 |
865 | 6000 | 1.467734 | CAGAGCTGCAATCAAGACCAC | 59.532 | 52.381 | 1.02 | 0.00 | 0.00 | 4.16 |
866 | 6001 | 0.807496 | GAGCTGCAATCAAGACCACC | 59.193 | 55.000 | 1.02 | 0.00 | 0.00 | 4.61 |
870 | 6005 | 0.109532 | TGCAATCAAGACCACCGGAA | 59.890 | 50.000 | 9.46 | 0.00 | 0.00 | 4.30 |
871 | 6006 | 0.521735 | GCAATCAAGACCACCGGAAC | 59.478 | 55.000 | 9.46 | 0.00 | 0.00 | 3.62 |
896 | 6128 | 3.347590 | CCCTTCTTCCCCCACCCC | 61.348 | 72.222 | 0.00 | 0.00 | 0.00 | 4.95 |
898 | 6130 | 2.204306 | CTTCTTCCCCCACCCCCT | 60.204 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
899 | 6131 | 2.534272 | TTCTTCCCCCACCCCCTG | 60.534 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
914 | 6179 | 1.071471 | CCTGAGCCGAAACACCAGT | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
915 | 6180 | 1.230635 | CCTGAGCCGAAACACCAGTG | 61.231 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
926 | 6191 | 1.807814 | ACACCAGTGGAGAGAAACCT | 58.192 | 50.000 | 18.40 | 0.00 | 34.19 | 3.50 |
928 | 6193 | 2.104963 | ACACCAGTGGAGAGAAACCTTC | 59.895 | 50.000 | 18.40 | 0.00 | 34.19 | 3.46 |
938 | 6203 | 1.518367 | AGAAACCTTCTCCACCACCA | 58.482 | 50.000 | 0.00 | 0.00 | 34.07 | 4.17 |
939 | 6204 | 2.065799 | AGAAACCTTCTCCACCACCAT | 58.934 | 47.619 | 0.00 | 0.00 | 34.07 | 3.55 |
940 | 6205 | 3.256704 | AGAAACCTTCTCCACCACCATA | 58.743 | 45.455 | 0.00 | 0.00 | 34.07 | 2.74 |
941 | 6206 | 3.009143 | AGAAACCTTCTCCACCACCATAC | 59.991 | 47.826 | 0.00 | 0.00 | 34.07 | 2.39 |
942 | 6207 | 0.902531 | ACCTTCTCCACCACCATACG | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
943 | 6208 | 0.902531 | CCTTCTCCACCACCATACGT | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 3.57 |
944 | 6209 | 1.134788 | CCTTCTCCACCACCATACGTC | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 4.34 |
945 | 6210 | 0.899720 | TTCTCCACCACCATACGTCC | 59.100 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
965 | 6252 | 6.043938 | ACGTCCATACCTCCATTATTTACCAT | 59.956 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
978 | 6265 | 4.778213 | ATTTACCATCAGCTAGCTTGGA | 57.222 | 40.909 | 32.81 | 21.53 | 33.36 | 3.53 |
993 | 6280 | 0.909610 | TTGGACGAGCAGGGGAATCT | 60.910 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
998 | 6285 | 0.033228 | CGAGCAGGGGAATCTAGCAG | 59.967 | 60.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1033 | 6323 | 0.987081 | AGCCATCCTGCTCCTCATGT | 60.987 | 55.000 | 0.00 | 0.00 | 36.75 | 3.21 |
1254 | 6544 | 4.093952 | CCGCGCTTCAGCAACCTG | 62.094 | 66.667 | 5.56 | 0.00 | 42.21 | 4.00 |
1262 | 6552 | 4.680237 | CAGCAACCTGACCGCCGA | 62.680 | 66.667 | 0.00 | 0.00 | 41.77 | 5.54 |
1325 | 6615 | 4.504916 | CGGCGAGGTGGAGCTCTG | 62.505 | 72.222 | 14.64 | 0.00 | 0.00 | 3.35 |
1365 | 6655 | 3.989698 | AATCGAGGTGCGGACGCTG | 62.990 | 63.158 | 18.04 | 3.15 | 42.51 | 5.18 |
1404 | 6694 | 3.873883 | GGCGTGCTCAGCATCTGC | 61.874 | 66.667 | 0.54 | 7.86 | 41.91 | 4.26 |
1823 | 7113 | 2.182842 | CCAGAGTTGCGCCATAGGC | 61.183 | 63.158 | 4.18 | 0.00 | 46.75 | 3.93 |
1864 | 7154 | 3.736483 | CTGGTGTTCAGCGCAGTT | 58.264 | 55.556 | 11.47 | 0.00 | 36.60 | 3.16 |
1893 | 7183 | 1.355210 | CACTGTTGGTGGCACGTTC | 59.645 | 57.895 | 12.17 | 4.68 | 41.90 | 3.95 |
1894 | 7184 | 2.177580 | ACTGTTGGTGGCACGTTCG | 61.178 | 57.895 | 12.17 | 1.43 | 0.00 | 3.95 |
1895 | 7185 | 2.892334 | CTGTTGGTGGCACGTTCGG | 61.892 | 63.158 | 12.17 | 5.37 | 0.00 | 4.30 |
1896 | 7186 | 2.898343 | GTTGGTGGCACGTTCGGT | 60.898 | 61.111 | 12.17 | 0.00 | 0.00 | 4.69 |
1897 | 7187 | 2.589442 | TTGGTGGCACGTTCGGTC | 60.589 | 61.111 | 12.17 | 0.00 | 0.00 | 4.79 |
1898 | 7188 | 4.612412 | TGGTGGCACGTTCGGTCC | 62.612 | 66.667 | 12.17 | 0.00 | 0.00 | 4.46 |
1899 | 7189 | 4.612412 | GGTGGCACGTTCGGTCCA | 62.612 | 66.667 | 12.17 | 0.84 | 0.00 | 4.02 |
1900 | 7190 | 2.358247 | GTGGCACGTTCGGTCCAT | 60.358 | 61.111 | 0.00 | 0.00 | 31.49 | 3.41 |
1901 | 7191 | 2.358125 | TGGCACGTTCGGTCCATG | 60.358 | 61.111 | 0.00 | 0.00 | 0.00 | 3.66 |
1902 | 7192 | 2.358247 | GGCACGTTCGGTCCATGT | 60.358 | 61.111 | 0.00 | 0.00 | 0.00 | 3.21 |
1903 | 7193 | 1.079681 | GGCACGTTCGGTCCATGTA | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 2.29 |
1904 | 7194 | 0.461339 | GGCACGTTCGGTCCATGTAT | 60.461 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1905 | 7195 | 0.928229 | GCACGTTCGGTCCATGTATC | 59.072 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1906 | 7196 | 1.567504 | CACGTTCGGTCCATGTATCC | 58.432 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1907 | 7197 | 0.462789 | ACGTTCGGTCCATGTATCCC | 59.537 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1908 | 7198 | 0.462375 | CGTTCGGTCCATGTATCCCA | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
1909 | 7199 | 1.070134 | CGTTCGGTCCATGTATCCCAT | 59.930 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
1910 | 7200 | 2.767505 | GTTCGGTCCATGTATCCCATC | 58.232 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
1911 | 7201 | 1.348064 | TCGGTCCATGTATCCCATCC | 58.652 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1912 | 7202 | 1.055849 | CGGTCCATGTATCCCATCCA | 58.944 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1913 | 7203 | 1.630369 | CGGTCCATGTATCCCATCCAT | 59.370 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1914 | 7204 | 2.616256 | CGGTCCATGTATCCCATCCATG | 60.616 | 54.545 | 0.00 | 0.00 | 36.56 | 3.66 |
1916 | 7206 | 1.843368 | CCATGTATCCCATCCATGGC | 58.157 | 55.000 | 6.96 | 0.00 | 46.45 | 4.40 |
1917 | 7207 | 1.617804 | CCATGTATCCCATCCATGGCC | 60.618 | 57.143 | 6.96 | 0.00 | 46.45 | 5.36 |
1918 | 7208 | 0.329261 | ATGTATCCCATCCATGGCCG | 59.671 | 55.000 | 6.96 | 0.00 | 46.70 | 6.13 |
1919 | 7209 | 1.059584 | TGTATCCCATCCATGGCCGT | 61.060 | 55.000 | 6.96 | 0.00 | 46.70 | 5.68 |
1920 | 7210 | 0.321653 | GTATCCCATCCATGGCCGTC | 60.322 | 60.000 | 6.96 | 0.00 | 46.70 | 4.79 |
1921 | 7211 | 1.826340 | TATCCCATCCATGGCCGTCG | 61.826 | 60.000 | 6.96 | 0.00 | 46.70 | 5.12 |
1922 | 7212 | 4.175337 | CCCATCCATGGCCGTCGT | 62.175 | 66.667 | 6.96 | 0.00 | 46.70 | 4.34 |
1923 | 7213 | 2.124736 | CCATCCATGGCCGTCGTT | 60.125 | 61.111 | 6.96 | 0.00 | 41.75 | 3.85 |
1924 | 7214 | 1.748879 | CCATCCATGGCCGTCGTTT | 60.749 | 57.895 | 6.96 | 0.00 | 41.75 | 3.60 |
1925 | 7215 | 1.312371 | CCATCCATGGCCGTCGTTTT | 61.312 | 55.000 | 6.96 | 0.00 | 41.75 | 2.43 |
1926 | 7216 | 0.179166 | CATCCATGGCCGTCGTTTTG | 60.179 | 55.000 | 6.96 | 0.00 | 0.00 | 2.44 |
1927 | 7217 | 1.933115 | ATCCATGGCCGTCGTTTTGC | 61.933 | 55.000 | 6.96 | 0.00 | 0.00 | 3.68 |
1928 | 7218 | 2.642129 | CATGGCCGTCGTTTTGCA | 59.358 | 55.556 | 0.00 | 0.00 | 0.00 | 4.08 |
1929 | 7219 | 1.729131 | CATGGCCGTCGTTTTGCAC | 60.729 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
1938 | 7228 | 2.313267 | CGTTTTGCACGGTGTAGGT | 58.687 | 52.632 | 10.24 | 0.00 | 45.89 | 3.08 |
1939 | 7229 | 0.233848 | CGTTTTGCACGGTGTAGGTC | 59.766 | 55.000 | 10.24 | 0.00 | 45.89 | 3.85 |
1940 | 7230 | 1.589803 | GTTTTGCACGGTGTAGGTCT | 58.410 | 50.000 | 10.24 | 0.00 | 0.00 | 3.85 |
1941 | 7231 | 1.263217 | GTTTTGCACGGTGTAGGTCTG | 59.737 | 52.381 | 10.24 | 0.00 | 0.00 | 3.51 |
1942 | 7232 | 0.466543 | TTTGCACGGTGTAGGTCTGT | 59.533 | 50.000 | 10.24 | 0.00 | 0.00 | 3.41 |
1943 | 7233 | 0.032952 | TTGCACGGTGTAGGTCTGTC | 59.967 | 55.000 | 10.24 | 0.00 | 0.00 | 3.51 |
1944 | 7234 | 1.110518 | TGCACGGTGTAGGTCTGTCA | 61.111 | 55.000 | 10.24 | 0.00 | 0.00 | 3.58 |
1945 | 7235 | 0.666577 | GCACGGTGTAGGTCTGTCAC | 60.667 | 60.000 | 10.24 | 0.00 | 0.00 | 3.67 |
1946 | 7236 | 0.959553 | CACGGTGTAGGTCTGTCACT | 59.040 | 55.000 | 0.00 | 0.00 | 33.30 | 3.41 |
1947 | 7237 | 1.340248 | CACGGTGTAGGTCTGTCACTT | 59.660 | 52.381 | 0.00 | 0.00 | 33.30 | 3.16 |
1948 | 7238 | 1.340248 | ACGGTGTAGGTCTGTCACTTG | 59.660 | 52.381 | 0.00 | 0.00 | 33.30 | 3.16 |
1949 | 7239 | 1.340248 | CGGTGTAGGTCTGTCACTTGT | 59.660 | 52.381 | 0.00 | 0.00 | 33.30 | 3.16 |
1950 | 7240 | 2.607282 | CGGTGTAGGTCTGTCACTTGTC | 60.607 | 54.545 | 0.00 | 0.00 | 33.30 | 3.18 |
1951 | 7241 | 2.628657 | GGTGTAGGTCTGTCACTTGTCT | 59.371 | 50.000 | 0.00 | 0.00 | 33.30 | 3.41 |
1952 | 7242 | 3.825014 | GGTGTAGGTCTGTCACTTGTCTA | 59.175 | 47.826 | 0.00 | 0.00 | 33.30 | 2.59 |
1953 | 7243 | 4.280174 | GGTGTAGGTCTGTCACTTGTCTAA | 59.720 | 45.833 | 0.00 | 0.00 | 33.30 | 2.10 |
1954 | 7244 | 5.221382 | GGTGTAGGTCTGTCACTTGTCTAAA | 60.221 | 44.000 | 0.00 | 0.00 | 33.30 | 1.85 |
1955 | 7245 | 5.690857 | GTGTAGGTCTGTCACTTGTCTAAAC | 59.309 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
1956 | 7246 | 5.361571 | TGTAGGTCTGTCACTTGTCTAAACA | 59.638 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1957 | 7247 | 4.694339 | AGGTCTGTCACTTGTCTAAACAC | 58.306 | 43.478 | 0.00 | 0.00 | 34.35 | 3.32 |
1958 | 7248 | 4.406003 | AGGTCTGTCACTTGTCTAAACACT | 59.594 | 41.667 | 0.00 | 0.00 | 34.35 | 3.55 |
1959 | 7249 | 5.597182 | AGGTCTGTCACTTGTCTAAACACTA | 59.403 | 40.000 | 0.00 | 0.00 | 34.35 | 2.74 |
1960 | 7250 | 5.921408 | GGTCTGTCACTTGTCTAAACACTAG | 59.079 | 44.000 | 0.00 | 0.00 | 34.35 | 2.57 |
1961 | 7251 | 6.461231 | GGTCTGTCACTTGTCTAAACACTAGT | 60.461 | 42.308 | 0.00 | 0.00 | 34.35 | 2.57 |
1962 | 7252 | 7.255381 | GGTCTGTCACTTGTCTAAACACTAGTA | 60.255 | 40.741 | 0.00 | 0.00 | 34.35 | 1.82 |
1963 | 7253 | 7.590689 | GTCTGTCACTTGTCTAAACACTAGTAC | 59.409 | 40.741 | 0.00 | 0.00 | 34.35 | 2.73 |
1964 | 7254 | 7.501559 | TCTGTCACTTGTCTAAACACTAGTACT | 59.498 | 37.037 | 0.00 | 0.00 | 34.35 | 2.73 |
1965 | 7255 | 8.681486 | TGTCACTTGTCTAAACACTAGTACTA | 57.319 | 34.615 | 1.89 | 1.89 | 34.35 | 1.82 |
1966 | 7256 | 8.562892 | TGTCACTTGTCTAAACACTAGTACTAC | 58.437 | 37.037 | 0.00 | 0.00 | 34.35 | 2.73 |
1967 | 7257 | 8.020244 | GTCACTTGTCTAAACACTAGTACTACC | 58.980 | 40.741 | 0.00 | 0.00 | 34.35 | 3.18 |
1968 | 7258 | 7.720957 | TCACTTGTCTAAACACTAGTACTACCA | 59.279 | 37.037 | 0.00 | 0.00 | 34.35 | 3.25 |
1969 | 7259 | 8.521176 | CACTTGTCTAAACACTAGTACTACCAT | 58.479 | 37.037 | 0.00 | 0.00 | 34.35 | 3.55 |
1970 | 7260 | 8.738106 | ACTTGTCTAAACACTAGTACTACCATC | 58.262 | 37.037 | 0.00 | 0.00 | 34.35 | 3.51 |
1971 | 7261 | 8.874744 | TTGTCTAAACACTAGTACTACCATCT | 57.125 | 34.615 | 0.00 | 0.00 | 34.35 | 2.90 |
1972 | 7262 | 8.503458 | TGTCTAAACACTAGTACTACCATCTC | 57.497 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
1973 | 7263 | 7.555554 | TGTCTAAACACTAGTACTACCATCTCC | 59.444 | 40.741 | 0.00 | 0.00 | 0.00 | 3.71 |
1974 | 7264 | 7.774625 | GTCTAAACACTAGTACTACCATCTCCT | 59.225 | 40.741 | 0.00 | 0.00 | 0.00 | 3.69 |
1975 | 7265 | 6.777213 | AAACACTAGTACTACCATCTCCTG | 57.223 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1976 | 7266 | 5.453866 | ACACTAGTACTACCATCTCCTGT | 57.546 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1977 | 7267 | 5.194432 | ACACTAGTACTACCATCTCCTGTG | 58.806 | 45.833 | 0.00 | 5.19 | 0.00 | 3.66 |
1978 | 7268 | 4.036971 | CACTAGTACTACCATCTCCTGTGC | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1979 | 7269 | 3.390175 | AGTACTACCATCTCCTGTGCT | 57.610 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
1980 | 7270 | 3.714144 | AGTACTACCATCTCCTGTGCTT | 58.286 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
1981 | 7271 | 3.449018 | AGTACTACCATCTCCTGTGCTTG | 59.551 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
1982 | 7272 | 2.260822 | ACTACCATCTCCTGTGCTTGT | 58.739 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1983 | 7273 | 2.027745 | ACTACCATCTCCTGTGCTTGTG | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1984 | 7274 | 0.767375 | ACCATCTCCTGTGCTTGTGT | 59.233 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1985 | 7275 | 1.162698 | CCATCTCCTGTGCTTGTGTG | 58.837 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1986 | 7276 | 1.544093 | CCATCTCCTGTGCTTGTGTGT | 60.544 | 52.381 | 0.00 | 0.00 | 0.00 | 3.72 |
1987 | 7277 | 2.224606 | CATCTCCTGTGCTTGTGTGTT | 58.775 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
1988 | 7278 | 1.953559 | TCTCCTGTGCTTGTGTGTTC | 58.046 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1989 | 7279 | 1.486310 | TCTCCTGTGCTTGTGTGTTCT | 59.514 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
1990 | 7280 | 1.869767 | CTCCTGTGCTTGTGTGTTCTC | 59.130 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
1991 | 7281 | 1.486310 | TCCTGTGCTTGTGTGTTCTCT | 59.514 | 47.619 | 0.00 | 0.00 | 0.00 | 3.10 |
1992 | 7282 | 2.698274 | TCCTGTGCTTGTGTGTTCTCTA | 59.302 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
1993 | 7283 | 3.324846 | TCCTGTGCTTGTGTGTTCTCTAT | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
1994 | 7284 | 3.681897 | CCTGTGCTTGTGTGTTCTCTATC | 59.318 | 47.826 | 0.00 | 0.00 | 0.00 | 2.08 |
1995 | 7285 | 4.562347 | CCTGTGCTTGTGTGTTCTCTATCT | 60.562 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
1996 | 7286 | 4.960938 | TGTGCTTGTGTGTTCTCTATCTT | 58.039 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
1997 | 7287 | 4.751600 | TGTGCTTGTGTGTTCTCTATCTTG | 59.248 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
1998 | 7288 | 4.752101 | GTGCTTGTGTGTTCTCTATCTTGT | 59.248 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1999 | 7289 | 5.926542 | GTGCTTGTGTGTTCTCTATCTTGTA | 59.073 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2000 | 7290 | 6.591834 | GTGCTTGTGTGTTCTCTATCTTGTAT | 59.408 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2001 | 7291 | 7.759886 | GTGCTTGTGTGTTCTCTATCTTGTATA | 59.240 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
2002 | 7292 | 8.478066 | TGCTTGTGTGTTCTCTATCTTGTATAT | 58.522 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2003 | 7293 | 9.967346 | GCTTGTGTGTTCTCTATCTTGTATATA | 57.033 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2015 | 7305 | 9.140286 | TCTATCTTGTATATATTTGTTGCGAGC | 57.860 | 33.333 | 0.00 | 0.00 | 0.00 | 5.03 |
2016 | 7306 | 7.728847 | ATCTTGTATATATTTGTTGCGAGCA | 57.271 | 32.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2017 | 7307 | 7.546778 | TCTTGTATATATTTGTTGCGAGCAA | 57.453 | 32.000 | 6.39 | 6.39 | 0.00 | 3.91 |
2032 | 7322 | 7.786178 | TTGCGAGCAACTATTTCTATGTATT | 57.214 | 32.000 | 6.39 | 0.00 | 0.00 | 1.89 |
2033 | 7323 | 7.408132 | TGCGAGCAACTATTTCTATGTATTC | 57.592 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2035 | 7325 | 7.382488 | TGCGAGCAACTATTTCTATGTATTCTC | 59.618 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
2036 | 7326 | 7.596995 | GCGAGCAACTATTTCTATGTATTCTCT | 59.403 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
2037 | 7327 | 9.123709 | CGAGCAACTATTTCTATGTATTCTCTC | 57.876 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
2038 | 7328 | 9.418045 | GAGCAACTATTTCTATGTATTCTCTCC | 57.582 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
2085 | 7375 | 9.950496 | ATAGAGATTTCATTATGGACCACATAC | 57.050 | 33.333 | 0.00 | 0.00 | 41.61 | 2.39 |
2086 | 7376 | 6.931281 | AGAGATTTCATTATGGACCACATACG | 59.069 | 38.462 | 0.00 | 0.00 | 41.61 | 3.06 |
2087 | 7377 | 6.826668 | AGATTTCATTATGGACCACATACGA | 58.173 | 36.000 | 0.00 | 0.00 | 41.61 | 3.43 |
2088 | 7378 | 7.279615 | AGATTTCATTATGGACCACATACGAA | 58.720 | 34.615 | 0.00 | 0.00 | 41.61 | 3.85 |
2089 | 7379 | 7.939039 | AGATTTCATTATGGACCACATACGAAT | 59.061 | 33.333 | 0.00 | 0.00 | 41.61 | 3.34 |
2090 | 7380 | 6.859420 | TTCATTATGGACCACATACGAATG | 57.141 | 37.500 | 0.00 | 0.95 | 41.61 | 2.67 |
2092 | 7382 | 7.056844 | TCATTATGGACCACATACGAATGTA | 57.943 | 36.000 | 0.00 | 0.00 | 44.70 | 2.29 |
2093 | 7383 | 7.676004 | TCATTATGGACCACATACGAATGTAT | 58.324 | 34.615 | 0.00 | 0.00 | 44.70 | 2.29 |
2094 | 7384 | 8.808092 | TCATTATGGACCACATACGAATGTATA | 58.192 | 33.333 | 0.00 | 0.00 | 44.70 | 1.47 |
2095 | 7385 | 9.599866 | CATTATGGACCACATACGAATGTATAT | 57.400 | 33.333 | 0.00 | 0.00 | 44.70 | 0.86 |
2098 | 7388 | 8.589701 | ATGGACCACATACGAATGTATATAGA | 57.410 | 34.615 | 0.00 | 0.00 | 44.70 | 1.98 |
2099 | 7389 | 8.589701 | TGGACCACATACGAATGTATATAGAT | 57.410 | 34.615 | 0.00 | 0.00 | 44.70 | 1.98 |
2100 | 7390 | 8.466798 | TGGACCACATACGAATGTATATAGATG | 58.533 | 37.037 | 0.00 | 0.00 | 44.70 | 2.90 |
2101 | 7391 | 7.435488 | GGACCACATACGAATGTATATAGATGC | 59.565 | 40.741 | 0.00 | 0.00 | 44.70 | 3.91 |
2102 | 7392 | 7.836842 | ACCACATACGAATGTATATAGATGCA | 58.163 | 34.615 | 0.00 | 0.00 | 44.70 | 3.96 |
2103 | 7393 | 8.478066 | ACCACATACGAATGTATATAGATGCAT | 58.522 | 33.333 | 0.00 | 0.00 | 44.70 | 3.96 |
2122 | 7412 | 9.624373 | AGATGCATTTTAGAGTGTAGATTCATT | 57.376 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2123 | 7413 | 9.875675 | GATGCATTTTAGAGTGTAGATTCATTC | 57.124 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
2124 | 7414 | 8.791327 | TGCATTTTAGAGTGTAGATTCATTCA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
2125 | 7415 | 9.399797 | TGCATTTTAGAGTGTAGATTCATTCAT | 57.600 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2131 | 7421 | 7.934855 | AGAGTGTAGATTCATTCATTTTGCT | 57.065 | 32.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2132 | 7422 | 8.345724 | AGAGTGTAGATTCATTCATTTTGCTT | 57.654 | 30.769 | 0.00 | 0.00 | 0.00 | 3.91 |
2133 | 7423 | 8.457261 | AGAGTGTAGATTCATTCATTTTGCTTC | 58.543 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
2134 | 7424 | 8.114331 | AGTGTAGATTCATTCATTTTGCTTCA | 57.886 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
2135 | 7425 | 8.746530 | AGTGTAGATTCATTCATTTTGCTTCAT | 58.253 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2144 | 7434 | 8.623903 | TCATTCATTTTGCTTCATATGTAGTCC | 58.376 | 33.333 | 10.61 | 0.00 | 0.00 | 3.85 |
2145 | 7435 | 7.936496 | TTCATTTTGCTTCATATGTAGTCCA | 57.064 | 32.000 | 10.61 | 0.00 | 0.00 | 4.02 |
2146 | 7436 | 8.523915 | TTCATTTTGCTTCATATGTAGTCCAT | 57.476 | 30.769 | 10.61 | 0.00 | 37.58 | 3.41 |
2147 | 7437 | 9.625747 | TTCATTTTGCTTCATATGTAGTCCATA | 57.374 | 29.630 | 10.61 | 0.00 | 40.27 | 2.74 |
2148 | 7438 | 9.276590 | TCATTTTGCTTCATATGTAGTCCATAG | 57.723 | 33.333 | 10.61 | 0.00 | 39.36 | 2.23 |
2149 | 7439 | 9.060347 | CATTTTGCTTCATATGTAGTCCATAGT | 57.940 | 33.333 | 10.61 | 0.00 | 39.36 | 2.12 |
2150 | 7440 | 8.437360 | TTTTGCTTCATATGTAGTCCATAGTG | 57.563 | 34.615 | 10.61 | 0.00 | 39.36 | 2.74 |
2151 | 7441 | 6.976934 | TGCTTCATATGTAGTCCATAGTGA | 57.023 | 37.500 | 10.61 | 0.00 | 39.36 | 3.41 |
2152 | 7442 | 7.360113 | TGCTTCATATGTAGTCCATAGTGAA | 57.640 | 36.000 | 10.61 | 0.00 | 39.36 | 3.18 |
2153 | 7443 | 7.791029 | TGCTTCATATGTAGTCCATAGTGAAA | 58.209 | 34.615 | 10.61 | 0.00 | 39.36 | 2.69 |
2154 | 7444 | 8.432013 | TGCTTCATATGTAGTCCATAGTGAAAT | 58.568 | 33.333 | 10.61 | 0.00 | 39.36 | 2.17 |
2155 | 7445 | 8.930760 | GCTTCATATGTAGTCCATAGTGAAATC | 58.069 | 37.037 | 10.61 | 0.00 | 39.36 | 2.17 |
2158 | 7448 | 9.593565 | TCATATGTAGTCCATAGTGAAATCTCT | 57.406 | 33.333 | 1.90 | 0.00 | 39.36 | 3.10 |
2161 | 7451 | 7.260558 | TGTAGTCCATAGTGAAATCTCTACG | 57.739 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2162 | 7452 | 7.052248 | TGTAGTCCATAGTGAAATCTCTACGA | 58.948 | 38.462 | 0.00 | 0.00 | 0.00 | 3.43 |
2163 | 7453 | 7.555195 | TGTAGTCCATAGTGAAATCTCTACGAA | 59.445 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2164 | 7454 | 7.033530 | AGTCCATAGTGAAATCTCTACGAAG | 57.966 | 40.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2165 | 7455 | 6.829298 | AGTCCATAGTGAAATCTCTACGAAGA | 59.171 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
2166 | 7456 | 6.913673 | GTCCATAGTGAAATCTCTACGAAGAC | 59.086 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
2167 | 7457 | 6.829298 | TCCATAGTGAAATCTCTACGAAGACT | 59.171 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
2168 | 7458 | 7.339721 | TCCATAGTGAAATCTCTACGAAGACTT | 59.660 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2169 | 7459 | 8.622157 | CCATAGTGAAATCTCTACGAAGACTTA | 58.378 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
2181 | 7471 | 9.596677 | CTCTACGAAGACTTATATTTAGGAACG | 57.403 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
2182 | 7472 | 8.562892 | TCTACGAAGACTTATATTTAGGAACGG | 58.437 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
2183 | 7473 | 7.338800 | ACGAAGACTTATATTTAGGAACGGA | 57.661 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2184 | 7474 | 7.424001 | ACGAAGACTTATATTTAGGAACGGAG | 58.576 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
2185 | 7475 | 6.862090 | CGAAGACTTATATTTAGGAACGGAGG | 59.138 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
2186 | 7476 | 6.667558 | AGACTTATATTTAGGAACGGAGGG | 57.332 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2187 | 7477 | 6.379579 | AGACTTATATTTAGGAACGGAGGGA | 58.620 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2188 | 7478 | 6.494146 | AGACTTATATTTAGGAACGGAGGGAG | 59.506 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
2189 | 7479 | 6.141790 | ACTTATATTTAGGAACGGAGGGAGT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2190 | 7480 | 7.300658 | ACTTATATTTAGGAACGGAGGGAGTA | 58.699 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2191 | 7481 | 7.954620 | ACTTATATTTAGGAACGGAGGGAGTAT | 59.045 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
2192 | 7482 | 9.471702 | CTTATATTTAGGAACGGAGGGAGTATA | 57.528 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
2194 | 7484 | 8.912614 | ATATTTAGGAACGGAGGGAGTATATT | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2196 | 7486 | 8.912614 | ATTTAGGAACGGAGGGAGTATATTAT | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2198 | 7488 | 9.471702 | TTTAGGAACGGAGGGAGTATATTATAG | 57.528 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
2199 | 7489 | 6.433441 | AGGAACGGAGGGAGTATATTATAGG | 58.567 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2202 | 7492 | 7.836183 | GGAACGGAGGGAGTATATTATAGGTAA | 59.164 | 40.741 | 0.00 | 0.00 | 0.00 | 2.85 |
2219 | 7509 | 9.774413 | TTATAGGTAATTACTTTTGGAGCTAGC | 57.226 | 33.333 | 15.05 | 6.62 | 0.00 | 3.42 |
2222 | 7512 | 5.886474 | GGTAATTACTTTTGGAGCTAGCCTT | 59.114 | 40.000 | 12.13 | 0.00 | 0.00 | 4.35 |
2224 | 7514 | 2.498644 | ACTTTTGGAGCTAGCCTTCC | 57.501 | 50.000 | 12.13 | 13.61 | 0.00 | 3.46 |
2227 | 7517 | 0.620556 | TTTGGAGCTAGCCTTCCTGG | 59.379 | 55.000 | 20.37 | 0.00 | 39.35 | 4.45 |
2228 | 7518 | 1.274703 | TTGGAGCTAGCCTTCCTGGG | 61.275 | 60.000 | 20.37 | 0.00 | 36.00 | 4.45 |
2232 | 7522 | 1.228094 | GCTAGCCTTCCTGGGATGC | 60.228 | 63.158 | 2.29 | 0.00 | 36.00 | 3.91 |
2254 | 7544 | 3.405823 | AGAAAATGTTGTTGGCCATGG | 57.594 | 42.857 | 6.09 | 7.63 | 0.00 | 3.66 |
2264 | 7554 | 2.041485 | TGTTGGCCATGGATTCTTCTGA | 59.959 | 45.455 | 18.40 | 0.00 | 0.00 | 3.27 |
2278 | 7568 | 9.096823 | TGGATTCTTCTGAACCTAACTTAGTAA | 57.903 | 33.333 | 0.00 | 0.00 | 34.71 | 2.24 |
2279 | 7569 | 9.589111 | GGATTCTTCTGAACCTAACTTAGTAAG | 57.411 | 37.037 | 8.41 | 8.41 | 34.71 | 2.34 |
2281 | 7571 | 9.930693 | ATTCTTCTGAACCTAACTTAGTAAGTG | 57.069 | 33.333 | 16.22 | 6.79 | 37.09 | 3.16 |
2282 | 7572 | 8.701908 | TCTTCTGAACCTAACTTAGTAAGTGA | 57.298 | 34.615 | 16.22 | 8.10 | 41.91 | 3.41 |
2284 | 7574 | 9.760077 | CTTCTGAACCTAACTTAGTAAGTGAAA | 57.240 | 33.333 | 16.22 | 4.84 | 41.91 | 2.69 |
2288 | 7578 | 9.321562 | TGAACCTAACTTAGTAAGTGAAAACAG | 57.678 | 33.333 | 16.22 | 7.05 | 41.91 | 3.16 |
2289 | 7579 | 8.672823 | AACCTAACTTAGTAAGTGAAAACAGG | 57.327 | 34.615 | 16.22 | 15.74 | 41.91 | 4.00 |
2291 | 7581 | 8.148999 | ACCTAACTTAGTAAGTGAAAACAGGAG | 58.851 | 37.037 | 16.22 | 3.66 | 41.91 | 3.69 |
2297 | 7672 | 6.867662 | AGTAAGTGAAAACAGGAGACATTG | 57.132 | 37.500 | 0.00 | 0.00 | 0.00 | 2.82 |
2320 | 7695 | 8.574251 | TTGTATTGCTAGCTCAAGGATAAAAA | 57.426 | 30.769 | 17.23 | 0.00 | 0.00 | 1.94 |
2356 | 7732 | 2.100749 | ACACCTGCAAGCTTAAACAACC | 59.899 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
2389 | 7766 | 8.518702 | CATTAGACTATTGATTGATCGAGGAGA | 58.481 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
2390 | 7767 | 6.325919 | AGACTATTGATTGATCGAGGAGAC | 57.674 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2445 | 7827 | 3.502256 | TGGTTCGTTAACGCTTTTACG | 57.498 | 42.857 | 22.96 | 8.02 | 38.74 | 3.18 |
2485 | 7867 | 1.101049 | AGTGTTTGCACCAGGGAACG | 61.101 | 55.000 | 0.00 | 0.00 | 46.35 | 3.95 |
2498 | 7880 | 2.264794 | GAACGGGTGCGGATCAGT | 59.735 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
2515 | 7897 | 1.341531 | CAGTGAACTCGGGAACTCAGT | 59.658 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2530 | 7912 | 3.722147 | ACTCAGTACAGCAGTTGACAAG | 58.278 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2542 | 7924 | 2.287915 | AGTTGACAAGCTAAAGCACACG | 59.712 | 45.455 | 4.54 | 0.00 | 45.16 | 4.49 |
2615 | 7997 | 2.549282 | CGCAACCTGAACGAACCG | 59.451 | 61.111 | 0.00 | 0.00 | 0.00 | 4.44 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 1.143889 | TGTCACCAGGGCAACATTACA | 59.856 | 47.619 | 0.00 | 0.00 | 39.74 | 2.41 |
18 | 19 | 0.605319 | GGCGAGTGGATTTGTCACCA | 60.605 | 55.000 | 0.00 | 0.00 | 35.87 | 4.17 |
26 | 27 | 0.674895 | GCAGAGTTGGCGAGTGGATT | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
60 | 61 | 2.427245 | CGGCACTCGATCCCCTTCT | 61.427 | 63.158 | 0.00 | 0.00 | 42.43 | 2.85 |
73 | 74 | 1.803334 | TGGAATAAGTGTGACGGCAC | 58.197 | 50.000 | 16.50 | 16.50 | 45.35 | 5.01 |
74 | 75 | 2.550606 | GTTTGGAATAAGTGTGACGGCA | 59.449 | 45.455 | 0.00 | 0.00 | 0.00 | 5.69 |
98 | 99 | 1.125093 | TGAGTTGGGGATGACGGTGT | 61.125 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
138 | 139 | 5.213675 | GCATTGACGTGTAGATAGTAGGTC | 58.786 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
144 | 145 | 2.102420 | TGGGGCATTGACGTGTAGATAG | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 2.08 |
155 | 156 | 4.202567 | GGAAACCTATATCTGGGGCATTGA | 60.203 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
157 | 158 | 4.388577 | GGAAACCTATATCTGGGGCATT | 57.611 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
174 | 175 | 1.380302 | GGCAGGAGAGCAAGGGAAA | 59.620 | 57.895 | 0.00 | 0.00 | 35.83 | 3.13 |
176 | 177 | 3.393970 | CGGCAGGAGAGCAAGGGA | 61.394 | 66.667 | 0.00 | 0.00 | 35.83 | 4.20 |
237 | 238 | 1.540363 | CCAATTATGCTAGTCCGCCGT | 60.540 | 52.381 | 0.00 | 0.00 | 0.00 | 5.68 |
247 | 248 | 4.526438 | AAGAAGGCTACCCAATTATGCT | 57.474 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
251 | 252 | 3.692593 | GCGAAAAGAAGGCTACCCAATTA | 59.307 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
265 | 266 | 0.309612 | GTTGCGAAAGGGCGAAAAGA | 59.690 | 50.000 | 0.00 | 0.00 | 35.06 | 2.52 |
271 | 272 | 1.082104 | GTTCTGTTGCGAAAGGGCG | 60.082 | 57.895 | 0.00 | 0.00 | 35.06 | 6.13 |
309 | 310 | 3.470645 | AGTAACTGAAACGAGCAACCT | 57.529 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
354 | 355 | 2.803386 | TGCAAACACATACACGTCGATT | 59.197 | 40.909 | 0.00 | 0.00 | 0.00 | 3.34 |
426 | 428 | 4.452733 | CCCGCCAACTCGTCCCTC | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
429 | 431 | 2.741211 | GTTCCCGCCAACTCGTCC | 60.741 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
432 | 434 | 2.752322 | TACACGTTCCCGCCAACTCG | 62.752 | 60.000 | 0.00 | 0.00 | 37.70 | 4.18 |
434 | 436 | 1.005394 | CTACACGTTCCCGCCAACT | 60.005 | 57.895 | 0.00 | 0.00 | 37.70 | 3.16 |
442 | 451 | 1.376812 | CTTGCCCCCTACACGTTCC | 60.377 | 63.158 | 0.00 | 0.00 | 0.00 | 3.62 |
447 | 456 | 0.611062 | GGAAACCTTGCCCCCTACAC | 60.611 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
459 | 468 | 1.303282 | GGCCGGATTGAGGAAACCT | 59.697 | 57.895 | 5.05 | 0.00 | 36.03 | 3.50 |
465 | 474 | 0.393077 | AATCTACGGCCGGATTGAGG | 59.607 | 55.000 | 31.76 | 8.98 | 31.88 | 3.86 |
470 | 479 | 3.640029 | TCTAAGAAAATCTACGGCCGGAT | 59.360 | 43.478 | 31.76 | 20.41 | 0.00 | 4.18 |
474 | 483 | 4.571176 | CCTGTTCTAAGAAAATCTACGGCC | 59.429 | 45.833 | 0.00 | 0.00 | 0.00 | 6.13 |
476 | 485 | 8.654215 | GTTAACCTGTTCTAAGAAAATCTACGG | 58.346 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
477 | 486 | 9.420551 | AGTTAACCTGTTCTAAGAAAATCTACG | 57.579 | 33.333 | 0.88 | 0.00 | 0.00 | 3.51 |
484 | 493 | 7.133133 | ACCAGAGTTAACCTGTTCTAAGAAA | 57.867 | 36.000 | 17.46 | 0.00 | 0.00 | 2.52 |
485 | 494 | 6.742559 | ACCAGAGTTAACCTGTTCTAAGAA | 57.257 | 37.500 | 17.46 | 0.00 | 0.00 | 2.52 |
487 | 496 | 6.522054 | TGAACCAGAGTTAACCTGTTCTAAG | 58.478 | 40.000 | 21.81 | 11.50 | 35.94 | 2.18 |
546 | 555 | 5.207768 | CAATGATATTTAGCGCCTTGTGAC | 58.792 | 41.667 | 2.29 | 0.00 | 0.00 | 3.67 |
556 | 565 | 5.273170 | TCACTTTGCGCAATGATATTTAGC | 58.727 | 37.500 | 34.44 | 0.00 | 0.00 | 3.09 |
741 | 5555 | 0.107263 | TTGTGACAGAAGCTGTGCCA | 60.107 | 50.000 | 4.60 | 0.00 | 45.44 | 4.92 |
743 | 5557 | 0.041839 | CGTTGTGACAGAAGCTGTGC | 60.042 | 55.000 | 4.60 | 0.00 | 45.44 | 4.57 |
759 | 5573 | 0.684153 | ATGGCTGGCTTTATGGCGTT | 60.684 | 50.000 | 2.00 | 0.00 | 45.14 | 4.84 |
760 | 5574 | 0.684153 | AATGGCTGGCTTTATGGCGT | 60.684 | 50.000 | 2.00 | 0.00 | 45.14 | 5.68 |
799 | 5806 | 1.604147 | CCCGGTTGCCATTTTCTCCC | 61.604 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
836 | 5971 | 3.633525 | TGATTGCAGCTCTGTTTTTGACT | 59.366 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
840 | 5975 | 4.500375 | GGTCTTGATTGCAGCTCTGTTTTT | 60.500 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
844 | 5979 | 1.072806 | TGGTCTTGATTGCAGCTCTGT | 59.927 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
848 | 5983 | 0.957395 | CGGTGGTCTTGATTGCAGCT | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
853 | 5988 | 1.165270 | GGTTCCGGTGGTCTTGATTG | 58.835 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
855 | 5990 | 1.131303 | TGGGTTCCGGTGGTCTTGAT | 61.131 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
863 | 5998 | 0.757561 | AGGGTTTTTGGGTTCCGGTG | 60.758 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
865 | 6000 | 0.677288 | GAAGGGTTTTTGGGTTCCGG | 59.323 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
866 | 6001 | 1.699730 | AGAAGGGTTTTTGGGTTCCG | 58.300 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
870 | 6005 | 1.413953 | GGGGAAGAAGGGTTTTTGGGT | 60.414 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
871 | 6006 | 1.348064 | GGGGAAGAAGGGTTTTTGGG | 58.652 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
896 | 6128 | 1.071471 | ACTGGTGTTTCGGCTCAGG | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
898 | 6130 | 1.227823 | CCACTGGTGTTTCGGCTCA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
899 | 6131 | 0.951040 | CTCCACTGGTGTTTCGGCTC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
904 | 6169 | 2.879026 | GGTTTCTCTCCACTGGTGTTTC | 59.121 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
926 | 6191 | 0.899720 | GGACGTATGGTGGTGGAGAA | 59.100 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
928 | 6193 | 0.830648 | ATGGACGTATGGTGGTGGAG | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
935 | 6200 | 2.464796 | TGGAGGTATGGACGTATGGT | 57.535 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
936 | 6201 | 5.677319 | ATAATGGAGGTATGGACGTATGG | 57.323 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
937 | 6202 | 7.548075 | GGTAAATAATGGAGGTATGGACGTATG | 59.452 | 40.741 | 0.00 | 0.00 | 0.00 | 2.39 |
938 | 6203 | 7.236019 | TGGTAAATAATGGAGGTATGGACGTAT | 59.764 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
939 | 6204 | 6.554228 | TGGTAAATAATGGAGGTATGGACGTA | 59.446 | 38.462 | 0.00 | 0.00 | 0.00 | 3.57 |
940 | 6205 | 5.367352 | TGGTAAATAATGGAGGTATGGACGT | 59.633 | 40.000 | 0.00 | 0.00 | 0.00 | 4.34 |
941 | 6206 | 5.860611 | TGGTAAATAATGGAGGTATGGACG | 58.139 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
942 | 6207 | 7.458397 | TGATGGTAAATAATGGAGGTATGGAC | 58.542 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
943 | 6208 | 7.640577 | TGATGGTAAATAATGGAGGTATGGA | 57.359 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
944 | 6209 | 6.375455 | GCTGATGGTAAATAATGGAGGTATGG | 59.625 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
945 | 6210 | 7.170965 | AGCTGATGGTAAATAATGGAGGTATG | 58.829 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
965 | 6252 | 1.250840 | TGCTCGTCCAAGCTAGCTGA | 61.251 | 55.000 | 20.16 | 9.55 | 42.94 | 4.26 |
978 | 6265 | 0.687757 | TGCTAGATTCCCCTGCTCGT | 60.688 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1310 | 6600 | 4.828925 | GCCAGAGCTCCACCTCGC | 62.829 | 72.222 | 10.93 | 0.00 | 36.95 | 5.03 |
1346 | 6636 | 3.554692 | GCGTCCGCACCTCGATTG | 61.555 | 66.667 | 6.82 | 0.00 | 41.67 | 2.67 |
1347 | 6637 | 3.760035 | AGCGTCCGCACCTCGATT | 61.760 | 61.111 | 14.70 | 0.00 | 44.88 | 3.34 |
1384 | 6674 | 3.857854 | GATGCTGAGCACGCCGTG | 61.858 | 66.667 | 10.33 | 13.95 | 43.04 | 4.94 |
1397 | 6687 | 1.449353 | CCTCCCAGGTAGCAGATGC | 59.551 | 63.158 | 0.00 | 0.00 | 42.49 | 3.91 |
1404 | 6694 | 3.164269 | ATGGCGCCTCCCAGGTAG | 61.164 | 66.667 | 29.70 | 0.00 | 38.50 | 3.18 |
1500 | 6790 | 0.663688 | CGATGAGGTAGACGGTGAGG | 59.336 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1823 | 7113 | 2.357952 | TGTACATCAAGGACGGAGATCG | 59.642 | 50.000 | 0.00 | 0.00 | 45.88 | 3.69 |
1864 | 7154 | 2.132996 | CAACAGTGCCCTTTGCCCA | 61.133 | 57.895 | 0.00 | 0.00 | 40.16 | 5.36 |
1887 | 7177 | 1.567504 | GGATACATGGACCGAACGTG | 58.432 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
1890 | 7180 | 2.550208 | GGATGGGATACATGGACCGAAC | 60.550 | 54.545 | 0.00 | 0.00 | 40.72 | 3.95 |
1893 | 7183 | 1.055849 | TGGATGGGATACATGGACCG | 58.944 | 55.000 | 0.00 | 0.00 | 40.72 | 4.79 |
1894 | 7184 | 3.077484 | CATGGATGGGATACATGGACC | 57.923 | 52.381 | 0.00 | 0.00 | 45.84 | 4.46 |
1907 | 7197 | 0.179166 | CAAAACGACGGCCATGGATG | 60.179 | 55.000 | 18.40 | 9.22 | 0.00 | 3.51 |
1908 | 7198 | 1.933115 | GCAAAACGACGGCCATGGAT | 61.933 | 55.000 | 18.40 | 0.00 | 0.00 | 3.41 |
1909 | 7199 | 2.622011 | GCAAAACGACGGCCATGGA | 61.622 | 57.895 | 18.40 | 0.00 | 0.00 | 3.41 |
1910 | 7200 | 2.126502 | GCAAAACGACGGCCATGG | 60.127 | 61.111 | 7.63 | 7.63 | 0.00 | 3.66 |
1911 | 7201 | 1.729131 | GTGCAAAACGACGGCCATG | 60.729 | 57.895 | 2.24 | 0.00 | 0.00 | 3.66 |
1912 | 7202 | 2.642700 | GTGCAAAACGACGGCCAT | 59.357 | 55.556 | 2.24 | 0.00 | 0.00 | 4.40 |
1921 | 7211 | 1.263217 | CAGACCTACACCGTGCAAAAC | 59.737 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
1922 | 7212 | 1.134340 | ACAGACCTACACCGTGCAAAA | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
1923 | 7213 | 0.466543 | ACAGACCTACACCGTGCAAA | 59.533 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
1924 | 7214 | 0.032952 | GACAGACCTACACCGTGCAA | 59.967 | 55.000 | 0.00 | 0.00 | 0.00 | 4.08 |
1925 | 7215 | 1.110518 | TGACAGACCTACACCGTGCA | 61.111 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1926 | 7216 | 0.666577 | GTGACAGACCTACACCGTGC | 60.667 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1927 | 7217 | 0.959553 | AGTGACAGACCTACACCGTG | 59.040 | 55.000 | 0.00 | 0.00 | 35.47 | 4.94 |
1928 | 7218 | 1.340248 | CAAGTGACAGACCTACACCGT | 59.660 | 52.381 | 0.00 | 0.00 | 35.47 | 4.83 |
1929 | 7219 | 1.340248 | ACAAGTGACAGACCTACACCG | 59.660 | 52.381 | 0.00 | 0.00 | 35.47 | 4.94 |
1930 | 7220 | 2.628657 | AGACAAGTGACAGACCTACACC | 59.371 | 50.000 | 0.00 | 0.00 | 35.47 | 4.16 |
1931 | 7221 | 5.449107 | TTAGACAAGTGACAGACCTACAC | 57.551 | 43.478 | 0.00 | 0.00 | 35.15 | 2.90 |
1932 | 7222 | 5.361571 | TGTTTAGACAAGTGACAGACCTACA | 59.638 | 40.000 | 0.00 | 0.00 | 31.49 | 2.74 |
1933 | 7223 | 5.690857 | GTGTTTAGACAAGTGACAGACCTAC | 59.309 | 44.000 | 0.00 | 0.00 | 37.57 | 3.18 |
1934 | 7224 | 5.597182 | AGTGTTTAGACAAGTGACAGACCTA | 59.403 | 40.000 | 0.00 | 0.00 | 37.57 | 3.08 |
1935 | 7225 | 4.406003 | AGTGTTTAGACAAGTGACAGACCT | 59.594 | 41.667 | 0.00 | 0.00 | 37.57 | 3.85 |
1936 | 7226 | 4.694339 | AGTGTTTAGACAAGTGACAGACC | 58.306 | 43.478 | 0.00 | 0.00 | 37.57 | 3.85 |
1937 | 7227 | 6.505272 | ACTAGTGTTTAGACAAGTGACAGAC | 58.495 | 40.000 | 0.00 | 0.00 | 37.57 | 3.51 |
1938 | 7228 | 6.710597 | ACTAGTGTTTAGACAAGTGACAGA | 57.289 | 37.500 | 0.00 | 0.00 | 37.57 | 3.41 |
1939 | 7229 | 7.649973 | AGTACTAGTGTTTAGACAAGTGACAG | 58.350 | 38.462 | 5.39 | 0.00 | 37.57 | 3.51 |
1940 | 7230 | 7.578310 | AGTACTAGTGTTTAGACAAGTGACA | 57.422 | 36.000 | 5.39 | 0.00 | 37.57 | 3.58 |
1941 | 7231 | 8.020244 | GGTAGTACTAGTGTTTAGACAAGTGAC | 58.980 | 40.741 | 5.39 | 0.00 | 37.57 | 3.67 |
1942 | 7232 | 7.720957 | TGGTAGTACTAGTGTTTAGACAAGTGA | 59.279 | 37.037 | 5.39 | 0.00 | 37.57 | 3.41 |
1943 | 7233 | 7.879070 | TGGTAGTACTAGTGTTTAGACAAGTG | 58.121 | 38.462 | 5.39 | 0.00 | 37.57 | 3.16 |
1944 | 7234 | 8.647256 | ATGGTAGTACTAGTGTTTAGACAAGT | 57.353 | 34.615 | 5.39 | 0.00 | 37.57 | 3.16 |
1945 | 7235 | 8.958506 | AGATGGTAGTACTAGTGTTTAGACAAG | 58.041 | 37.037 | 5.39 | 0.00 | 37.57 | 3.16 |
1946 | 7236 | 8.874744 | AGATGGTAGTACTAGTGTTTAGACAA | 57.125 | 34.615 | 5.39 | 0.00 | 37.57 | 3.18 |
1947 | 7237 | 7.555554 | GGAGATGGTAGTACTAGTGTTTAGACA | 59.444 | 40.741 | 5.39 | 0.00 | 0.00 | 3.41 |
1948 | 7238 | 7.774625 | AGGAGATGGTAGTACTAGTGTTTAGAC | 59.225 | 40.741 | 5.39 | 0.00 | 0.00 | 2.59 |
1949 | 7239 | 7.774157 | CAGGAGATGGTAGTACTAGTGTTTAGA | 59.226 | 40.741 | 5.39 | 0.00 | 0.00 | 2.10 |
1950 | 7240 | 7.556996 | ACAGGAGATGGTAGTACTAGTGTTTAG | 59.443 | 40.741 | 5.39 | 0.00 | 0.00 | 1.85 |
1951 | 7241 | 7.338703 | CACAGGAGATGGTAGTACTAGTGTTTA | 59.661 | 40.741 | 5.39 | 0.00 | 0.00 | 2.01 |
1952 | 7242 | 6.153000 | CACAGGAGATGGTAGTACTAGTGTTT | 59.847 | 42.308 | 5.39 | 0.00 | 0.00 | 2.83 |
1953 | 7243 | 5.652891 | CACAGGAGATGGTAGTACTAGTGTT | 59.347 | 44.000 | 5.39 | 0.00 | 0.00 | 3.32 |
1954 | 7244 | 5.194432 | CACAGGAGATGGTAGTACTAGTGT | 58.806 | 45.833 | 5.39 | 0.00 | 0.00 | 3.55 |
1955 | 7245 | 4.036971 | GCACAGGAGATGGTAGTACTAGTG | 59.963 | 50.000 | 5.39 | 5.88 | 0.00 | 2.74 |
1956 | 7246 | 4.079672 | AGCACAGGAGATGGTAGTACTAGT | 60.080 | 45.833 | 1.87 | 0.00 | 0.00 | 2.57 |
1957 | 7247 | 4.465886 | AGCACAGGAGATGGTAGTACTAG | 58.534 | 47.826 | 1.87 | 0.00 | 0.00 | 2.57 |
1958 | 7248 | 4.521536 | AGCACAGGAGATGGTAGTACTA | 57.478 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1959 | 7249 | 3.390175 | AGCACAGGAGATGGTAGTACT | 57.610 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
1960 | 7250 | 3.195825 | ACAAGCACAGGAGATGGTAGTAC | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
1961 | 7251 | 3.195610 | CACAAGCACAGGAGATGGTAGTA | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 1.82 |
1962 | 7252 | 2.027745 | CACAAGCACAGGAGATGGTAGT | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1963 | 7253 | 2.027745 | ACACAAGCACAGGAGATGGTAG | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1964 | 7254 | 1.977854 | ACACAAGCACAGGAGATGGTA | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.25 |
1965 | 7255 | 0.767375 | ACACAAGCACAGGAGATGGT | 59.233 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1966 | 7256 | 1.162698 | CACACAAGCACAGGAGATGG | 58.837 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1967 | 7257 | 1.888215 | ACACACAAGCACAGGAGATG | 58.112 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1968 | 7258 | 2.105477 | AGAACACACAAGCACAGGAGAT | 59.895 | 45.455 | 0.00 | 0.00 | 0.00 | 2.75 |
1969 | 7259 | 1.486310 | AGAACACACAAGCACAGGAGA | 59.514 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
1970 | 7260 | 1.869767 | GAGAACACACAAGCACAGGAG | 59.130 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
1971 | 7261 | 1.486310 | AGAGAACACACAAGCACAGGA | 59.514 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
1972 | 7262 | 1.959042 | AGAGAACACACAAGCACAGG | 58.041 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1973 | 7263 | 4.564041 | AGATAGAGAACACACAAGCACAG | 58.436 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
1974 | 7264 | 4.607293 | AGATAGAGAACACACAAGCACA | 57.393 | 40.909 | 0.00 | 0.00 | 0.00 | 4.57 |
1975 | 7265 | 4.752101 | ACAAGATAGAGAACACACAAGCAC | 59.248 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
1976 | 7266 | 4.960938 | ACAAGATAGAGAACACACAAGCA | 58.039 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
1977 | 7267 | 8.879342 | ATATACAAGATAGAGAACACACAAGC | 57.121 | 34.615 | 0.00 | 0.00 | 0.00 | 4.01 |
1989 | 7279 | 9.140286 | GCTCGCAACAAATATATACAAGATAGA | 57.860 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
1990 | 7280 | 8.925700 | TGCTCGCAACAAATATATACAAGATAG | 58.074 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
1991 | 7281 | 8.825667 | TGCTCGCAACAAATATATACAAGATA | 57.174 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
1992 | 7282 | 7.728847 | TGCTCGCAACAAATATATACAAGAT | 57.271 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1993 | 7283 | 7.546778 | TTGCTCGCAACAAATATATACAAGA | 57.453 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2008 | 7298 | 7.710907 | AGAATACATAGAAATAGTTGCTCGCAA | 59.289 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
2009 | 7299 | 7.210174 | AGAATACATAGAAATAGTTGCTCGCA | 58.790 | 34.615 | 0.00 | 0.00 | 0.00 | 5.10 |
2010 | 7300 | 7.596995 | AGAGAATACATAGAAATAGTTGCTCGC | 59.403 | 37.037 | 0.00 | 0.00 | 0.00 | 5.03 |
2011 | 7301 | 9.123709 | GAGAGAATACATAGAAATAGTTGCTCG | 57.876 | 37.037 | 0.00 | 0.00 | 0.00 | 5.03 |
2012 | 7302 | 9.418045 | GGAGAGAATACATAGAAATAGTTGCTC | 57.582 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
2013 | 7303 | 9.153479 | AGGAGAGAATACATAGAAATAGTTGCT | 57.847 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
2014 | 7304 | 9.771534 | AAGGAGAGAATACATAGAAATAGTTGC | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 4.17 |
2059 | 7349 | 9.950496 | GTATGTGGTCCATAATGAAATCTCTAT | 57.050 | 33.333 | 0.00 | 0.00 | 37.77 | 1.98 |
2060 | 7350 | 8.088365 | CGTATGTGGTCCATAATGAAATCTCTA | 58.912 | 37.037 | 0.00 | 0.00 | 37.77 | 2.43 |
2061 | 7351 | 6.931281 | CGTATGTGGTCCATAATGAAATCTCT | 59.069 | 38.462 | 0.00 | 0.00 | 37.77 | 3.10 |
2062 | 7352 | 6.929049 | TCGTATGTGGTCCATAATGAAATCTC | 59.071 | 38.462 | 0.00 | 0.00 | 37.77 | 2.75 |
2063 | 7353 | 6.826668 | TCGTATGTGGTCCATAATGAAATCT | 58.173 | 36.000 | 0.00 | 0.00 | 37.77 | 2.40 |
2064 | 7354 | 7.490962 | TTCGTATGTGGTCCATAATGAAATC | 57.509 | 36.000 | 0.00 | 0.00 | 37.77 | 2.17 |
2065 | 7355 | 7.502226 | ACATTCGTATGTGGTCCATAATGAAAT | 59.498 | 33.333 | 6.89 | 0.00 | 43.29 | 2.17 |
2066 | 7356 | 6.826231 | ACATTCGTATGTGGTCCATAATGAAA | 59.174 | 34.615 | 6.89 | 0.00 | 43.29 | 2.69 |
2067 | 7357 | 6.353323 | ACATTCGTATGTGGTCCATAATGAA | 58.647 | 36.000 | 6.89 | 1.74 | 43.29 | 2.57 |
2068 | 7358 | 5.924356 | ACATTCGTATGTGGTCCATAATGA | 58.076 | 37.500 | 6.89 | 0.00 | 43.29 | 2.57 |
2069 | 7359 | 7.905604 | ATACATTCGTATGTGGTCCATAATG | 57.094 | 36.000 | 16.91 | 1.01 | 44.56 | 1.90 |
2072 | 7362 | 9.689501 | TCTATATACATTCGTATGTGGTCCATA | 57.310 | 33.333 | 16.91 | 7.34 | 44.56 | 2.74 |
2073 | 7363 | 8.589701 | TCTATATACATTCGTATGTGGTCCAT | 57.410 | 34.615 | 16.91 | 5.45 | 44.56 | 3.41 |
2074 | 7364 | 8.466798 | CATCTATATACATTCGTATGTGGTCCA | 58.533 | 37.037 | 16.91 | 0.00 | 44.56 | 4.02 |
2075 | 7365 | 7.435488 | GCATCTATATACATTCGTATGTGGTCC | 59.565 | 40.741 | 16.91 | 0.00 | 44.56 | 4.46 |
2076 | 7366 | 7.973944 | TGCATCTATATACATTCGTATGTGGTC | 59.026 | 37.037 | 16.91 | 0.00 | 44.56 | 4.02 |
2077 | 7367 | 7.836842 | TGCATCTATATACATTCGTATGTGGT | 58.163 | 34.615 | 16.91 | 8.59 | 44.56 | 4.16 |
2078 | 7368 | 8.877808 | ATGCATCTATATACATTCGTATGTGG | 57.122 | 34.615 | 16.91 | 3.59 | 44.56 | 4.17 |
2096 | 7386 | 9.624373 | AATGAATCTACACTCTAAAATGCATCT | 57.376 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
2097 | 7387 | 9.875675 | GAATGAATCTACACTCTAAAATGCATC | 57.124 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
2098 | 7388 | 9.399797 | TGAATGAATCTACACTCTAAAATGCAT | 57.600 | 29.630 | 0.00 | 0.00 | 0.00 | 3.96 |
2099 | 7389 | 8.791327 | TGAATGAATCTACACTCTAAAATGCA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 3.96 |
2105 | 7395 | 9.453572 | AGCAAAATGAATGAATCTACACTCTAA | 57.546 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
2106 | 7396 | 9.453572 | AAGCAAAATGAATGAATCTACACTCTA | 57.546 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
2107 | 7397 | 7.934855 | AGCAAAATGAATGAATCTACACTCT | 57.065 | 32.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2108 | 7398 | 8.239314 | TGAAGCAAAATGAATGAATCTACACTC | 58.761 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2109 | 7399 | 8.114331 | TGAAGCAAAATGAATGAATCTACACT | 57.886 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
2110 | 7400 | 8.922058 | ATGAAGCAAAATGAATGAATCTACAC | 57.078 | 30.769 | 0.00 | 0.00 | 0.00 | 2.90 |
2118 | 7408 | 8.623903 | GGACTACATATGAAGCAAAATGAATGA | 58.376 | 33.333 | 10.38 | 0.00 | 0.00 | 2.57 |
2119 | 7409 | 8.407832 | TGGACTACATATGAAGCAAAATGAATG | 58.592 | 33.333 | 10.38 | 0.00 | 0.00 | 2.67 |
2120 | 7410 | 8.523915 | TGGACTACATATGAAGCAAAATGAAT | 57.476 | 30.769 | 10.38 | 0.00 | 0.00 | 2.57 |
2121 | 7411 | 7.936496 | TGGACTACATATGAAGCAAAATGAA | 57.064 | 32.000 | 10.38 | 0.00 | 0.00 | 2.57 |
2122 | 7412 | 9.276590 | CTATGGACTACATATGAAGCAAAATGA | 57.723 | 33.333 | 10.38 | 0.00 | 41.07 | 2.57 |
2123 | 7413 | 9.060347 | ACTATGGACTACATATGAAGCAAAATG | 57.940 | 33.333 | 10.38 | 0.00 | 41.07 | 2.32 |
2124 | 7414 | 9.060347 | CACTATGGACTACATATGAAGCAAAAT | 57.940 | 33.333 | 10.38 | 0.00 | 41.07 | 1.82 |
2125 | 7415 | 8.264347 | TCACTATGGACTACATATGAAGCAAAA | 58.736 | 33.333 | 10.38 | 0.00 | 41.07 | 2.44 |
2126 | 7416 | 7.791029 | TCACTATGGACTACATATGAAGCAAA | 58.209 | 34.615 | 10.38 | 0.00 | 41.07 | 3.68 |
2127 | 7417 | 7.360113 | TCACTATGGACTACATATGAAGCAA | 57.640 | 36.000 | 10.38 | 0.00 | 41.07 | 3.91 |
2128 | 7418 | 6.976934 | TCACTATGGACTACATATGAAGCA | 57.023 | 37.500 | 10.38 | 0.00 | 41.07 | 3.91 |
2129 | 7419 | 8.839310 | ATTTCACTATGGACTACATATGAAGC | 57.161 | 34.615 | 10.38 | 0.00 | 41.07 | 3.86 |
2132 | 7422 | 9.593565 | AGAGATTTCACTATGGACTACATATGA | 57.406 | 33.333 | 10.38 | 0.00 | 41.07 | 2.15 |
2135 | 7425 | 9.000486 | CGTAGAGATTTCACTATGGACTACATA | 58.000 | 37.037 | 0.00 | 0.00 | 41.03 | 2.29 |
2136 | 7426 | 7.720074 | TCGTAGAGATTTCACTATGGACTACAT | 59.280 | 37.037 | 0.00 | 0.00 | 43.68 | 2.29 |
2137 | 7427 | 7.052248 | TCGTAGAGATTTCACTATGGACTACA | 58.948 | 38.462 | 0.00 | 0.00 | 30.34 | 2.74 |
2138 | 7428 | 7.493743 | TCGTAGAGATTTCACTATGGACTAC | 57.506 | 40.000 | 0.00 | 0.00 | 30.34 | 2.73 |
2139 | 7429 | 7.991460 | TCTTCGTAGAGATTTCACTATGGACTA | 59.009 | 37.037 | 4.96 | 0.00 | 38.43 | 2.59 |
2140 | 7430 | 6.829298 | TCTTCGTAGAGATTTCACTATGGACT | 59.171 | 38.462 | 4.96 | 0.00 | 38.43 | 3.85 |
2141 | 7431 | 6.913673 | GTCTTCGTAGAGATTTCACTATGGAC | 59.086 | 42.308 | 0.00 | 2.91 | 38.43 | 4.02 |
2142 | 7432 | 6.829298 | AGTCTTCGTAGAGATTTCACTATGGA | 59.171 | 38.462 | 0.00 | 0.00 | 38.43 | 3.41 |
2143 | 7433 | 7.033530 | AGTCTTCGTAGAGATTTCACTATGG | 57.966 | 40.000 | 0.00 | 0.00 | 38.43 | 2.74 |
2155 | 7445 | 9.596677 | CGTTCCTAAATATAAGTCTTCGTAGAG | 57.403 | 37.037 | 0.00 | 0.00 | 38.43 | 2.43 |
2156 | 7446 | 8.562892 | CCGTTCCTAAATATAAGTCTTCGTAGA | 58.437 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
2157 | 7447 | 8.562892 | TCCGTTCCTAAATATAAGTCTTCGTAG | 58.437 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
2158 | 7448 | 8.450578 | TCCGTTCCTAAATATAAGTCTTCGTA | 57.549 | 34.615 | 0.00 | 0.00 | 0.00 | 3.43 |
2159 | 7449 | 7.338800 | TCCGTTCCTAAATATAAGTCTTCGT | 57.661 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2160 | 7450 | 6.862090 | CCTCCGTTCCTAAATATAAGTCTTCG | 59.138 | 42.308 | 0.00 | 0.00 | 0.00 | 3.79 |
2161 | 7451 | 7.015001 | TCCCTCCGTTCCTAAATATAAGTCTTC | 59.985 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
2162 | 7452 | 6.842807 | TCCCTCCGTTCCTAAATATAAGTCTT | 59.157 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
2163 | 7453 | 6.379579 | TCCCTCCGTTCCTAAATATAAGTCT | 58.620 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2164 | 7454 | 6.267242 | ACTCCCTCCGTTCCTAAATATAAGTC | 59.733 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
2165 | 7455 | 6.141790 | ACTCCCTCCGTTCCTAAATATAAGT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2166 | 7456 | 6.667558 | ACTCCCTCCGTTCCTAAATATAAG | 57.332 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2169 | 7459 | 8.912614 | AATATACTCCCTCCGTTCCTAAATAT | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2171 | 7461 | 8.912614 | ATAATATACTCCCTCCGTTCCTAAAT | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2172 | 7462 | 9.471702 | CTATAATATACTCCCTCCGTTCCTAAA | 57.528 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
2173 | 7463 | 8.057623 | CCTATAATATACTCCCTCCGTTCCTAA | 58.942 | 40.741 | 0.00 | 0.00 | 0.00 | 2.69 |
2174 | 7464 | 7.185304 | ACCTATAATATACTCCCTCCGTTCCTA | 59.815 | 40.741 | 0.00 | 0.00 | 0.00 | 2.94 |
2175 | 7465 | 6.010918 | ACCTATAATATACTCCCTCCGTTCCT | 60.011 | 42.308 | 0.00 | 0.00 | 0.00 | 3.36 |
2176 | 7466 | 6.193504 | ACCTATAATATACTCCCTCCGTTCC | 58.806 | 44.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2177 | 7467 | 8.814038 | TTACCTATAATATACTCCCTCCGTTC | 57.186 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
2178 | 7468 | 9.779951 | AATTACCTATAATATACTCCCTCCGTT | 57.220 | 33.333 | 0.00 | 0.00 | 30.42 | 4.44 |
2193 | 7483 | 9.774413 | GCTAGCTCCAAAAGTAATTACCTATAA | 57.226 | 33.333 | 12.05 | 0.00 | 0.00 | 0.98 |
2194 | 7484 | 8.373220 | GGCTAGCTCCAAAAGTAATTACCTATA | 58.627 | 37.037 | 15.72 | 0.00 | 0.00 | 1.31 |
2195 | 7485 | 7.072581 | AGGCTAGCTCCAAAAGTAATTACCTAT | 59.927 | 37.037 | 15.72 | 0.00 | 0.00 | 2.57 |
2196 | 7486 | 6.386050 | AGGCTAGCTCCAAAAGTAATTACCTA | 59.614 | 38.462 | 15.72 | 3.46 | 0.00 | 3.08 |
2197 | 7487 | 5.191921 | AGGCTAGCTCCAAAAGTAATTACCT | 59.808 | 40.000 | 15.72 | 0.00 | 0.00 | 3.08 |
2198 | 7488 | 5.437946 | AGGCTAGCTCCAAAAGTAATTACC | 58.562 | 41.667 | 15.72 | 0.00 | 0.00 | 2.85 |
2199 | 7489 | 6.038382 | GGAAGGCTAGCTCCAAAAGTAATTAC | 59.962 | 42.308 | 15.72 | 7.57 | 0.00 | 1.89 |
2202 | 7492 | 4.228438 | AGGAAGGCTAGCTCCAAAAGTAAT | 59.772 | 41.667 | 21.53 | 0.00 | 33.83 | 1.89 |
2214 | 7504 | 1.228094 | GCATCCCAGGAAGGCTAGC | 60.228 | 63.158 | 6.04 | 6.04 | 35.39 | 3.42 |
2219 | 7509 | 2.220653 | TTTCTTGCATCCCAGGAAGG | 57.779 | 50.000 | 0.00 | 0.00 | 40.16 | 3.46 |
2222 | 7512 | 3.173953 | ACATTTTCTTGCATCCCAGGA | 57.826 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
2224 | 7514 | 4.261578 | ACAACATTTTCTTGCATCCCAG | 57.738 | 40.909 | 0.00 | 0.00 | 0.00 | 4.45 |
2227 | 7517 | 3.187022 | GCCAACAACATTTTCTTGCATCC | 59.813 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
2228 | 7518 | 3.187022 | GGCCAACAACATTTTCTTGCATC | 59.813 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
2232 | 7522 | 3.499157 | CCATGGCCAACAACATTTTCTTG | 59.501 | 43.478 | 10.96 | 0.00 | 0.00 | 3.02 |
2264 | 7554 | 8.488668 | TCCTGTTTTCACTTACTAAGTTAGGTT | 58.511 | 33.333 | 14.36 | 0.00 | 40.46 | 3.50 |
2278 | 7568 | 6.294176 | GCAATACAATGTCTCCTGTTTTCACT | 60.294 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
2279 | 7569 | 5.858581 | GCAATACAATGTCTCCTGTTTTCAC | 59.141 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2280 | 7570 | 5.769662 | AGCAATACAATGTCTCCTGTTTTCA | 59.230 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2281 | 7571 | 6.259550 | AGCAATACAATGTCTCCTGTTTTC | 57.740 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2282 | 7572 | 6.127897 | GCTAGCAATACAATGTCTCCTGTTTT | 60.128 | 38.462 | 10.63 | 0.00 | 0.00 | 2.43 |
2284 | 7574 | 4.878397 | GCTAGCAATACAATGTCTCCTGTT | 59.122 | 41.667 | 10.63 | 0.00 | 0.00 | 3.16 |
2285 | 7575 | 4.163078 | AGCTAGCAATACAATGTCTCCTGT | 59.837 | 41.667 | 18.83 | 0.00 | 0.00 | 4.00 |
2288 | 7578 | 4.697514 | TGAGCTAGCAATACAATGTCTCC | 58.302 | 43.478 | 18.83 | 0.00 | 0.00 | 3.71 |
2289 | 7579 | 5.236047 | CCTTGAGCTAGCAATACAATGTCTC | 59.764 | 44.000 | 18.83 | 1.20 | 0.00 | 3.36 |
2291 | 7581 | 5.118990 | TCCTTGAGCTAGCAATACAATGTC | 58.881 | 41.667 | 18.83 | 2.54 | 0.00 | 3.06 |
2320 | 7695 | 1.047801 | GGTGTGGGCAGGTTTTCATT | 58.952 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2322 | 7697 | 0.754957 | CAGGTGTGGGCAGGTTTTCA | 60.755 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2356 | 7732 | 7.889589 | TCAATCAATAGTCTAATGTATGGCG | 57.110 | 36.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2389 | 7766 | 3.230976 | TCAGTCATGTGTACCTCTGTGT | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
2390 | 7767 | 3.507622 | TCTCAGTCATGTGTACCTCTGTG | 59.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
2445 | 7827 | 0.376152 | CAGTGGCGATTCTGTGATGC | 59.624 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2481 | 7863 | 2.100631 | CACTGATCCGCACCCGTTC | 61.101 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
2485 | 7867 | 0.741221 | GAGTTCACTGATCCGCACCC | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2498 | 7880 | 2.557056 | CTGTACTGAGTTCCCGAGTTCA | 59.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2515 | 7897 | 3.498397 | GCTTTAGCTTGTCAACTGCTGTA | 59.502 | 43.478 | 9.07 | 0.00 | 37.62 | 2.74 |
2549 | 7931 | 1.881973 | TGACAAGGCATTTCAGTGCTC | 59.118 | 47.619 | 0.00 | 0.00 | 44.45 | 4.26 |
2615 | 7997 | 3.067833 | GAGCAAGTCTTGTAGTTGGACC | 58.932 | 50.000 | 14.03 | 0.00 | 38.71 | 4.46 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.