Multiple sequence alignment - TraesCS2D01G183300
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS2D01G183300
chr2D
100.000
5182
0
0
1
5182
127947832
127942651
0.000000e+00
9570.0
1
TraesCS2D01G183300
chr2D
100.000
2225
0
0
5676
7900
127942157
127939933
0.000000e+00
4109.0
2
TraesCS2D01G183300
chr2D
95.213
1525
66
4
3661
5180
579068756
579067234
0.000000e+00
2405.0
3
TraesCS2D01G183300
chr2D
95.010
1523
71
3
3661
5180
34898132
34896612
0.000000e+00
2386.0
4
TraesCS2D01G183300
chr2D
95.050
202
9
1
5676
5877
499718824
499718624
4.600000e-82
316.0
5
TraesCS2D01G183300
chr2D
95.025
201
7
3
5676
5875
310710036
310709838
5.950000e-81
313.0
6
TraesCS2D01G183300
chr2A
95.479
1681
64
8
1793
3471
134883071
134881401
0.000000e+00
2673.0
7
TraesCS2D01G183300
chr2A
95.750
1153
32
6
5871
7019
134881403
134880264
0.000000e+00
1842.0
8
TraesCS2D01G183300
chr2A
93.805
565
22
5
906
1466
134884137
134883582
0.000000e+00
837.0
9
TraesCS2D01G183300
chr2A
85.294
850
38
23
1
807
134885265
134884460
0.000000e+00
797.0
10
TraesCS2D01G183300
chr2A
90.467
493
21
4
7076
7542
134880140
134879648
1.870000e-175
627.0
11
TraesCS2D01G183300
chr2A
93.060
317
21
1
7585
7900
134879618
134879302
5.580000e-126
462.0
12
TraesCS2D01G183300
chr2B
94.671
1689
59
15
1792
3471
181615807
181614141
0.000000e+00
2591.0
13
TraesCS2D01G183300
chr2B
95.372
1210
41
5
5871
7076
181614143
181612945
0.000000e+00
1910.0
14
TraesCS2D01G183300
chr2B
90.194
877
47
18
938
1792
181616823
181615964
0.000000e+00
1107.0
15
TraesCS2D01G183300
chr2B
90.285
597
39
8
327
914
181617966
181617380
0.000000e+00
763.0
16
TraesCS2D01G183300
chr2B
93.066
274
14
3
54
325
181618408
181618138
5.750000e-106
396.0
17
TraesCS2D01G183300
chr2B
94.253
87
4
1
7109
7195
181612863
181612778
1.790000e-26
132.0
18
TraesCS2D01G183300
chr2B
96.000
50
2
0
7195
7244
181612741
181612692
1.830000e-11
82.4
19
TraesCS2D01G183300
chr6D
93.786
1722
85
8
3471
5181
368732467
368734177
0.000000e+00
2567.0
20
TraesCS2D01G183300
chr6D
92.679
1721
109
10
3467
5181
391857504
391855795
0.000000e+00
2464.0
21
TraesCS2D01G183300
chr6D
95.918
196
8
0
5676
5871
377817041
377816846
1.280000e-82
318.0
22
TraesCS2D01G183300
chr6D
93.605
172
11
0
3473
3644
372886443
372886614
2.830000e-64
257.0
23
TraesCS2D01G183300
chr6D
82.123
179
31
1
7722
7900
315749492
315749315
1.370000e-32
152.0
24
TraesCS2D01G183300
chr7D
93.503
1724
98
6
3469
5180
250318038
250316317
0.000000e+00
2551.0
25
TraesCS2D01G183300
chr7D
92.837
1745
87
13
3471
5181
438062996
438064736
0.000000e+00
2495.0
26
TraesCS2D01G183300
chr7D
93.723
1609
78
9
3595
5181
379843181
379844788
0.000000e+00
2390.0
27
TraesCS2D01G183300
chr7D
95.050
202
10
0
5676
5877
383311767
383311566
1.280000e-82
318.0
28
TraesCS2D01G183300
chr7D
92.308
39
3
0
7848
7886
585674137
585674175
1.000000e-03
56.5
29
TraesCS2D01G183300
chr7D
100.000
29
0
0
7858
7886
585720535
585720563
4.000000e-03
54.7
30
TraesCS2D01G183300
chr4D
93.438
1722
97
10
3471
5181
37496769
37498485
0.000000e+00
2540.0
31
TraesCS2D01G183300
chr4D
91.954
1740
109
19
3471
5181
487284284
487286021
0.000000e+00
2409.0
32
TraesCS2D01G183300
chr4D
86.912
489
43
14
3471
3942
426600302
426600786
5.430000e-146
529.0
33
TraesCS2D01G183300
chr4D
87.171
304
27
4
3469
3762
314674712
314675013
1.270000e-87
335.0
34
TraesCS2D01G183300
chr4D
96.970
198
6
0
5676
5873
8892173
8891976
4.570000e-87
333.0
35
TraesCS2D01G183300
chr4D
95.455
198
9
0
5676
5873
394957421
394957224
4.600000e-82
316.0
36
TraesCS2D01G183300
chr5B
93.349
1714
103
8
3473
5181
395911305
395913012
0.000000e+00
2523.0
37
TraesCS2D01G183300
chr5B
92.339
1723
114
15
3471
5181
143298612
143300328
0.000000e+00
2435.0
38
TraesCS2D01G183300
chr5B
92.254
1717
102
10
3471
5161
280661082
280662793
0.000000e+00
2405.0
39
TraesCS2D01G183300
chr5B
90.719
1724
132
11
3466
5181
553620764
553622467
0.000000e+00
2272.0
40
TraesCS2D01G183300
chr5B
87.042
409
28
7
3469
3853
609870407
609870000
9.410000e-119
438.0
41
TraesCS2D01G183300
chr3D
93.071
1703
96
8
3469
5161
561766939
561765249
0.000000e+00
2471.0
42
TraesCS2D01G183300
chr3D
93.349
1654
78
12
3469
5092
388511689
388513340
0.000000e+00
2416.0
43
TraesCS2D01G183300
chr3D
92.267
1720
104
13
3467
5161
571850612
571848897
0.000000e+00
2412.0
44
TraesCS2D01G183300
chr3D
95.960
198
8
0
5676
5873
20754965
20755162
9.890000e-84
322.0
45
TraesCS2D01G183300
chr3D
82.990
194
30
2
7698
7890
193538869
193538678
1.050000e-38
172.0
46
TraesCS2D01G183300
chr1D
91.394
1743
111
20
3469
5181
201527338
201529071
0.000000e+00
2351.0
47
TraesCS2D01G183300
chr1D
90.501
1737
114
23
3471
5180
30587758
30589470
0.000000e+00
2246.0
48
TraesCS2D01G183300
chr1B
91.405
1722
128
17
3471
5180
322100216
322098503
0.000000e+00
2342.0
49
TraesCS2D01G183300
chr1B
90.408
1741
128
16
3469
5181
573066363
573064634
0.000000e+00
2254.0
50
TraesCS2D01G183300
chr1B
90.358
1732
141
19
3461
5172
107518342
107516617
0.000000e+00
2250.0
51
TraesCS2D01G183300
chr1B
90.217
736
51
7
3469
4185
573070727
573069994
0.000000e+00
941.0
52
TraesCS2D01G183300
chr5A
90.771
856
58
6
3471
4310
607742183
607741333
0.000000e+00
1123.0
53
TraesCS2D01G183300
chr5A
91.743
218
16
2
5677
5894
703832225
703832010
1.290000e-77
302.0
54
TraesCS2D01G183300
chr6B
89.881
840
56
16
3469
4284
592944225
592943391
0.000000e+00
1053.0
55
TraesCS2D01G183300
chr6B
89.583
480
36
3
3468
3936
711790271
711790747
1.470000e-166
597.0
56
TraesCS2D01G183300
chr4B
87.205
508
43
10
3469
3956
445262138
445262643
6.920000e-155
558.0
57
TraesCS2D01G183300
chrUn
86.864
472
43
11
3469
3923
61033246
61032777
1.970000e-140
510.0
58
TraesCS2D01G183300
chrUn
82.967
364
39
13
3468
3812
92689064
92688705
2.770000e-79
307.0
59
TraesCS2D01G183300
chrUn
82.784
273
36
5
3473
3736
36389374
36389644
4.770000e-57
233.0
60
TraesCS2D01G183300
chrUn
82.784
273
36
5
3473
3736
304608169
304608439
4.770000e-57
233.0
61
TraesCS2D01G183300
chrUn
89.024
164
16
2
3473
3635
99833573
99833411
1.340000e-47
202.0
62
TraesCS2D01G183300
chr5D
95.500
200
8
1
5676
5875
416261905
416262103
1.280000e-82
318.0
63
TraesCS2D01G183300
chr5D
75.649
308
67
6
7586
7887
35095473
35095778
6.390000e-31
147.0
64
TraesCS2D01G183300
chr3A
75.329
304
69
6
7599
7900
56732775
56732476
2.970000e-29
141.0
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS2D01G183300
chr2D
127939933
127947832
7899
True
6839.500000
9570
100.000000
1
7900
2
chr2D.!!$R5
7899
1
TraesCS2D01G183300
chr2D
579067234
579068756
1522
True
2405.000000
2405
95.213000
3661
5180
1
chr2D.!!$R4
1519
2
TraesCS2D01G183300
chr2D
34896612
34898132
1520
True
2386.000000
2386
95.010000
3661
5180
1
chr2D.!!$R1
1519
3
TraesCS2D01G183300
chr2A
134879302
134885265
5963
True
1206.333333
2673
92.309167
1
7900
6
chr2A.!!$R1
7899
4
TraesCS2D01G183300
chr2B
181612692
181618408
5716
True
997.342857
2591
93.405857
54
7244
7
chr2B.!!$R1
7190
5
TraesCS2D01G183300
chr6D
368732467
368734177
1710
False
2567.000000
2567
93.786000
3471
5181
1
chr6D.!!$F1
1710
6
TraesCS2D01G183300
chr6D
391855795
391857504
1709
True
2464.000000
2464
92.679000
3467
5181
1
chr6D.!!$R3
1714
7
TraesCS2D01G183300
chr7D
250316317
250318038
1721
True
2551.000000
2551
93.503000
3469
5180
1
chr7D.!!$R1
1711
8
TraesCS2D01G183300
chr7D
438062996
438064736
1740
False
2495.000000
2495
92.837000
3471
5181
1
chr7D.!!$F2
1710
9
TraesCS2D01G183300
chr7D
379843181
379844788
1607
False
2390.000000
2390
93.723000
3595
5181
1
chr7D.!!$F1
1586
10
TraesCS2D01G183300
chr4D
37496769
37498485
1716
False
2540.000000
2540
93.438000
3471
5181
1
chr4D.!!$F1
1710
11
TraesCS2D01G183300
chr4D
487284284
487286021
1737
False
2409.000000
2409
91.954000
3471
5181
1
chr4D.!!$F4
1710
12
TraesCS2D01G183300
chr5B
395911305
395913012
1707
False
2523.000000
2523
93.349000
3473
5181
1
chr5B.!!$F3
1708
13
TraesCS2D01G183300
chr5B
143298612
143300328
1716
False
2435.000000
2435
92.339000
3471
5181
1
chr5B.!!$F1
1710
14
TraesCS2D01G183300
chr5B
280661082
280662793
1711
False
2405.000000
2405
92.254000
3471
5161
1
chr5B.!!$F2
1690
15
TraesCS2D01G183300
chr5B
553620764
553622467
1703
False
2272.000000
2272
90.719000
3466
5181
1
chr5B.!!$F4
1715
16
TraesCS2D01G183300
chr3D
561765249
561766939
1690
True
2471.000000
2471
93.071000
3469
5161
1
chr3D.!!$R2
1692
17
TraesCS2D01G183300
chr3D
388511689
388513340
1651
False
2416.000000
2416
93.349000
3469
5092
1
chr3D.!!$F2
1623
18
TraesCS2D01G183300
chr3D
571848897
571850612
1715
True
2412.000000
2412
92.267000
3467
5161
1
chr3D.!!$R3
1694
19
TraesCS2D01G183300
chr1D
201527338
201529071
1733
False
2351.000000
2351
91.394000
3469
5181
1
chr1D.!!$F2
1712
20
TraesCS2D01G183300
chr1D
30587758
30589470
1712
False
2246.000000
2246
90.501000
3471
5180
1
chr1D.!!$F1
1709
21
TraesCS2D01G183300
chr1B
322098503
322100216
1713
True
2342.000000
2342
91.405000
3471
5180
1
chr1B.!!$R2
1709
22
TraesCS2D01G183300
chr1B
107516617
107518342
1725
True
2250.000000
2250
90.358000
3461
5172
1
chr1B.!!$R1
1711
23
TraesCS2D01G183300
chr1B
573064634
573070727
6093
True
1597.500000
2254
90.312500
3469
5181
2
chr1B.!!$R3
1712
24
TraesCS2D01G183300
chr5A
607741333
607742183
850
True
1123.000000
1123
90.771000
3471
4310
1
chr5A.!!$R1
839
25
TraesCS2D01G183300
chr6B
592943391
592944225
834
True
1053.000000
1053
89.881000
3469
4284
1
chr6B.!!$R1
815
26
TraesCS2D01G183300
chr4B
445262138
445262643
505
False
558.000000
558
87.205000
3469
3956
1
chr4B.!!$F1
487
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
698
928
0.033601
TGGTGTTTTGTCAGCCCTGT
60.034
50.000
0.0
0.0
35.31
4.00
F
1320
2086
0.395311
TCCTCGCCAAGGTATCGACT
60.395
55.000
0.0
0.0
46.32
4.18
F
1321
2087
1.134007
TCCTCGCCAAGGTATCGACTA
60.134
52.381
0.0
0.0
46.32
2.59
F
3269
4270
0.820226
TGAAGGATGGAGTCTGAGCG
59.180
55.000
0.0
0.0
0.00
5.03
F
3984
9480
0.524414
TGCATGATCACACAAGCAGC
59.476
50.000
0.0
0.0
31.53
5.25
F
4421
9924
1.228675
CCTTGCCAAGCAGAAGGGT
60.229
57.895
0.0
0.0
40.61
4.34
F
5730
11255
0.444651
CGACGCAAATCCGGCTTAAA
59.555
50.000
0.0
0.0
33.03
1.52
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1763
2598
0.105039
AGCTAATCGCAGTAGGCACC
59.895
55.000
0.00
0.0
45.17
5.01
R
3269
4270
1.534163
GCCCAGACTTCAAACCGTAAC
59.466
52.381
0.00
0.0
0.00
2.50
R
3341
4342
3.057876
CACAGACACAGACACTCTAGGAC
60.058
52.174
0.00
0.0
0.00
3.85
R
4350
9853
0.464036
CATACTAGAGGCCGTGGCAA
59.536
55.000
13.76
0.0
44.11
4.52
R
5711
11236
0.444651
TTTAAGCCGGATTTGCGTCG
59.555
50.000
11.69
0.0
0.00
5.12
R
5852
11377
0.613012
AAGAGCAACTCCAATGGGGC
60.613
55.000
0.00
0.0
36.21
5.80
R
6964
12493
0.108472
TACAGCAGCAGCAGTAGCAG
60.108
55.000
3.17
0.0
45.49
4.24
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
19
20
1.228429
CGTTCCAAAAGAGGGGGCA
60.228
57.895
0.00
0.00
0.00
5.36
22
23
1.074889
GTTCCAAAAGAGGGGGCAGTA
59.925
52.381
0.00
0.00
0.00
2.74
23
24
1.681229
TCCAAAAGAGGGGGCAGTAT
58.319
50.000
0.00
0.00
0.00
2.12
25
26
1.284785
CCAAAAGAGGGGGCAGTATCA
59.715
52.381
0.00
0.00
0.00
2.15
28
29
1.338136
AAGAGGGGGCAGTATCACGG
61.338
60.000
0.00
0.00
0.00
4.94
95
102
1.068083
TCGCTGATCCGAATGAGCC
59.932
57.895
0.00
0.00
38.75
4.70
99
106
2.108976
GATCCGAATGAGCCGCCA
59.891
61.111
0.00
0.00
0.00
5.69
103
110
1.153449
CCGAATGAGCCGCCACTTA
60.153
57.895
0.00
0.00
0.00
2.24
193
217
1.252175
GATCCTCTCCATCGCTGCTA
58.748
55.000
0.00
0.00
0.00
3.49
194
218
1.202114
GATCCTCTCCATCGCTGCTAG
59.798
57.143
0.00
0.00
0.00
3.42
195
219
0.106469
TCCTCTCCATCGCTGCTAGT
60.106
55.000
0.00
0.00
0.00
2.57
299
323
8.833493
GCTTGTACTGTACCCGATAAAATAAAT
58.167
33.333
14.91
0.00
0.00
1.40
356
550
1.443194
GTCATTTGCAGCCACAGCG
60.443
57.895
0.00
0.00
46.67
5.18
357
551
2.126228
CATTTGCAGCCACAGCGG
60.126
61.111
0.00
0.00
46.67
5.52
395
596
2.673368
GGAGAGTATGTTTCAACGGCAG
59.327
50.000
0.00
0.00
0.00
4.85
454
655
2.183300
GCATCGTGCCGTAGTGGA
59.817
61.111
0.00
0.00
42.00
4.02
648
878
4.402851
TGGCAACAGTGATGCTCC
57.597
55.556
22.71
9.55
46.17
4.70
649
879
1.672030
TGGCAACAGTGATGCTCCG
60.672
57.895
22.71
0.00
46.17
4.63
650
880
2.482374
GCAACAGTGATGCTCCGC
59.518
61.111
17.37
0.00
40.64
5.54
651
881
2.327343
GCAACAGTGATGCTCCGCA
61.327
57.895
17.37
0.00
44.86
5.69
652
882
1.499056
CAACAGTGATGCTCCGCAC
59.501
57.895
0.00
0.00
43.04
5.34
653
883
0.952497
CAACAGTGATGCTCCGCACT
60.952
55.000
0.00
0.00
45.62
4.40
654
884
0.671781
AACAGTGATGCTCCGCACTC
60.672
55.000
0.00
0.00
43.06
3.51
675
905
7.008810
GCACTCGTAGTAATCTTTCTTCTTCTG
59.991
40.741
0.00
0.00
0.00
3.02
698
928
0.033601
TGGTGTTTTGTCAGCCCTGT
60.034
50.000
0.00
0.00
35.31
4.00
743
973
2.244382
CGTGCCGTCGTGTCAAAC
59.756
61.111
0.00
0.00
0.00
2.93
781
1011
3.784763
ACCTCTGATGATCCCTCAACAAT
59.215
43.478
0.00
0.00
34.24
2.71
884
1114
2.358322
TTCCTTTCCAGCCGTTTCTT
57.642
45.000
0.00
0.00
0.00
2.52
973
1736
3.348236
CCACTGCTGGTGTCTTGC
58.652
61.111
8.95
0.00
43.94
4.01
1012
1775
4.615815
ATCCGATGGGCGCTCTGC
62.616
66.667
9.62
0.00
45.38
4.26
1320
2086
0.395311
TCCTCGCCAAGGTATCGACT
60.395
55.000
0.00
0.00
46.32
4.18
1321
2087
1.134007
TCCTCGCCAAGGTATCGACTA
60.134
52.381
0.00
0.00
46.32
2.59
1322
2088
1.887198
CCTCGCCAAGGTATCGACTAT
59.113
52.381
0.00
0.00
40.67
2.12
1323
2089
2.095161
CCTCGCCAAGGTATCGACTATC
60.095
54.545
0.00
0.00
40.67
2.08
1324
2090
1.534163
TCGCCAAGGTATCGACTATCG
59.466
52.381
0.00
0.00
42.10
2.92
1391
2162
2.745884
TCCCGGTCGCATTGCTTG
60.746
61.111
7.12
0.00
0.00
4.01
1409
2181
2.030958
GGTTAGTTGGTCCGCGTGG
61.031
63.158
9.28
9.28
0.00
4.94
1438
2210
1.269448
GGAATTTTGACGCTGCTCCAA
59.731
47.619
0.00
0.00
0.00
3.53
1487
2268
1.683365
CTGGTGGGGATTGCTTGGG
60.683
63.158
0.00
0.00
0.00
4.12
1510
2291
3.011760
GCGTCGGCCGTTGAGAAAG
62.012
63.158
27.15
8.01
39.32
2.62
1538
2324
3.380637
CGGCTGCCTAGTTTCTACTTAGA
59.619
47.826
17.92
0.00
35.78
2.10
1539
2325
4.684877
GGCTGCCTAGTTTCTACTTAGAC
58.315
47.826
12.43
0.00
35.78
2.59
1540
2326
4.159879
GGCTGCCTAGTTTCTACTTAGACA
59.840
45.833
12.43
0.00
35.78
3.41
1541
2327
5.344884
GCTGCCTAGTTTCTACTTAGACAG
58.655
45.833
0.00
0.00
35.78
3.51
1542
2328
5.105675
GCTGCCTAGTTTCTACTTAGACAGT
60.106
44.000
0.00
0.00
39.87
3.55
1544
2330
5.103687
GCCTAGTTTCTACTTAGACAGTGC
58.896
45.833
0.00
0.00
35.97
4.40
1547
2333
3.573110
AGTTTCTACTTAGACAGTGCCGT
59.427
43.478
0.00
0.00
35.97
5.68
1550
2338
3.008330
TCTACTTAGACAGTGCCGTCTC
58.992
50.000
4.01
0.00
42.70
3.36
1621
2423
3.243201
GCTTGCTGAAACTATACCATGCC
60.243
47.826
0.00
0.00
0.00
4.40
1626
2443
3.039743
TGAAACTATACCATGCCCGGTA
58.960
45.455
0.00
4.00
45.49
4.02
1658
2475
5.240623
TGTTCATCGCTTTTGGTTTATCTGT
59.759
36.000
0.00
0.00
0.00
3.41
1661
2478
3.896122
TCGCTTTTGGTTTATCTGTTGC
58.104
40.909
0.00
0.00
0.00
4.17
1686
2503
7.517417
GCATTGAGATGGACAAGTAATTCGTAG
60.517
40.741
0.00
0.00
33.72
3.51
1758
2593
7.219484
AGAATTCAACATGTCCTTCGATTTT
57.781
32.000
8.44
0.00
0.00
1.82
1813
2807
1.931841
CATCTCTCCGTGATTGCACAG
59.068
52.381
0.00
0.00
45.41
3.66
1819
2815
2.805671
CTCCGTGATTGCACAGTGTAAA
59.194
45.455
8.26
0.83
45.41
2.01
1827
2823
4.433186
TTGCACAGTGTAAACCATATGC
57.567
40.909
0.91
0.00
0.00
3.14
1862
2858
7.121168
TGAGCATTGATTTAGTAAAAGTCCAGG
59.879
37.037
0.00
0.00
0.00
4.45
2008
3004
5.809464
TGATATTGTCGCATGTGTTCATTC
58.191
37.500
6.09
5.99
31.15
2.67
2068
3064
1.701847
CCCATGGATCCTAGTTCCTGG
59.298
57.143
15.22
8.02
34.21
4.45
2125
3122
6.223120
GGTGAATCTGTGTTGCCTAATTTTT
58.777
36.000
0.00
0.00
0.00
1.94
2208
3205
2.287188
CGGCAGCAACTTGGCTTATATG
60.287
50.000
0.00
0.00
42.71
1.78
2296
3293
2.554893
GCACGGAGGTTTTGGTTGATTA
59.445
45.455
0.00
0.00
0.00
1.75
2330
3327
2.991190
CTGACATTTTCAATGCCACTGC
59.009
45.455
0.00
0.00
32.21
4.40
2353
3350
7.333323
TGCTCAGTTGATGGATGTATATATGG
58.667
38.462
0.00
0.00
0.00
2.74
2355
3352
8.478066
GCTCAGTTGATGGATGTATATATGGTA
58.522
37.037
0.00
0.00
0.00
3.25
2403
3401
6.431234
TGGCAGTTAAATGGTGTTTTGTTTTT
59.569
30.769
4.91
0.00
0.00
1.94
2433
3431
5.127031
ACTGGCAAACAAACATTTCTACAGT
59.873
36.000
0.00
0.00
0.00
3.55
2434
3432
5.971763
TGGCAAACAAACATTTCTACAGTT
58.028
33.333
0.00
0.00
0.00
3.16
2435
3433
7.101652
TGGCAAACAAACATTTCTACAGTTA
57.898
32.000
0.00
0.00
0.00
2.24
2436
3434
6.975772
TGGCAAACAAACATTTCTACAGTTAC
59.024
34.615
0.00
0.00
0.00
2.50
2548
3546
7.221452
GGATTTATTGCATGTTCTTGCTTAGTG
59.779
37.037
10.95
0.00
43.18
2.74
2553
3551
3.677601
CATGTTCTTGCTTAGTGATGCG
58.322
45.455
0.00
0.00
0.00
4.73
2557
3555
2.826428
TCTTGCTTAGTGATGCGGATC
58.174
47.619
10.37
10.37
0.00
3.36
2669
3667
1.134159
AGGCAGGAAGCAATAGAGCTG
60.134
52.381
0.00
0.00
45.89
4.24
2685
3683
8.778358
CAATAGAGCTGTTCCATTATCTAAACC
58.222
37.037
0.00
0.00
0.00
3.27
2723
3722
5.642063
AGCGTTGTTTGTATATGTAACTGCT
59.358
36.000
0.00
0.00
0.00
4.24
2996
3997
6.850231
ACTTACATCTTACCTTAAGGGCCTAT
59.150
38.462
25.31
10.58
40.27
2.57
3023
4024
5.248870
TGCTGAAAAGGTTTGTTCTCTTC
57.751
39.130
0.00
0.00
0.00
2.87
3254
4255
9.695526
TCAGTGTTTTGGAATCAATTTATGAAG
57.304
29.630
0.00
0.00
42.54
3.02
3269
4270
0.820226
TGAAGGATGGAGTCTGAGCG
59.180
55.000
0.00
0.00
0.00
5.03
3341
4342
6.596888
ACACAATGAATGTTCTCCAGATAGTG
59.403
38.462
0.00
0.00
41.46
2.74
3354
4355
4.475381
TCCAGATAGTGTCCTAGAGTGTCT
59.525
45.833
0.00
0.00
0.00
3.41
3378
4379
2.809601
GTGTCGTGCGATCGGCTT
60.810
61.111
18.30
0.00
44.05
4.35
3381
4382
4.435436
TCGTGCGATCGGCTTGCT
62.435
61.111
18.30
0.00
44.05
3.91
3403
4404
2.997899
CCAGCGGGATCTCATGAAC
58.002
57.895
0.00
0.00
35.59
3.18
3530
4533
1.750351
GTCCGCTTTTTGTCCGTTTC
58.250
50.000
0.00
0.00
0.00
2.78
3741
4866
4.904154
GTCTCACATAGTTTTGCAAACGAC
59.096
41.667
12.39
8.70
0.00
4.34
3837
4964
2.228822
GAGTTTCCCAATCACGCATGTT
59.771
45.455
0.00
0.00
0.00
2.71
3984
9480
0.524414
TGCATGATCACACAAGCAGC
59.476
50.000
0.00
0.00
31.53
5.25
4138
9637
1.896465
CTCTTCTCTCCGACAGGGTTT
59.104
52.381
0.00
0.00
38.33
3.27
4202
9704
4.885907
CGTCACCTAGGTAGTATCCTTTGA
59.114
45.833
15.80
0.19
38.86
2.69
4238
9740
2.828877
TGACAGTAAAGTTCACCGGTG
58.171
47.619
29.26
29.26
0.00
4.94
4421
9924
1.228675
CCTTGCCAAGCAGAAGGGT
60.229
57.895
0.00
0.00
40.61
4.34
4808
10326
1.708822
AATGACGGCGGAATTTTTGC
58.291
45.000
13.24
0.00
0.00
3.68
5727
11252
3.124921
CCGACGCAAATCCGGCTT
61.125
61.111
0.00
0.00
36.62
4.35
5728
11253
1.812093
CCGACGCAAATCCGGCTTA
60.812
57.895
0.00
0.00
36.62
3.09
5729
11254
1.363145
CCGACGCAAATCCGGCTTAA
61.363
55.000
0.00
0.00
36.62
1.85
5730
11255
0.444651
CGACGCAAATCCGGCTTAAA
59.555
50.000
0.00
0.00
33.03
1.52
5731
11256
1.135916
CGACGCAAATCCGGCTTAAAA
60.136
47.619
0.00
0.00
33.03
1.52
5732
11257
2.666069
CGACGCAAATCCGGCTTAAAAA
60.666
45.455
0.00
0.00
33.03
1.94
5733
11258
3.507786
GACGCAAATCCGGCTTAAAAAT
58.492
40.909
0.00
0.00
32.31
1.82
5734
11259
3.249917
ACGCAAATCCGGCTTAAAAATG
58.750
40.909
0.00
0.00
0.00
2.32
5735
11260
2.602660
CGCAAATCCGGCTTAAAAATGG
59.397
45.455
0.00
0.00
0.00
3.16
5736
11261
2.935849
GCAAATCCGGCTTAAAAATGGG
59.064
45.455
0.00
0.00
0.00
4.00
5737
11262
2.935849
CAAATCCGGCTTAAAAATGGGC
59.064
45.455
0.00
0.00
0.00
5.36
5738
11263
1.119684
ATCCGGCTTAAAAATGGGCC
58.880
50.000
0.00
0.00
41.02
5.80
5741
11266
1.520192
GGCTTAAAAATGGGCCGGG
59.480
57.895
2.18
0.00
35.08
5.73
5742
11267
0.973496
GGCTTAAAAATGGGCCGGGA
60.973
55.000
2.18
0.00
35.08
5.14
5743
11268
0.899019
GCTTAAAAATGGGCCGGGAA
59.101
50.000
2.18
0.00
0.00
3.97
5744
11269
1.484653
GCTTAAAAATGGGCCGGGAAT
59.515
47.619
2.18
0.00
0.00
3.01
5745
11270
2.741553
GCTTAAAAATGGGCCGGGAATG
60.742
50.000
2.18
0.00
0.00
2.67
5746
11271
1.490574
TAAAAATGGGCCGGGAATGG
58.509
50.000
2.18
0.00
0.00
3.16
5747
11272
1.271127
AAAAATGGGCCGGGAATGGG
61.271
55.000
2.18
0.00
0.00
4.00
5748
11273
2.469563
AAAATGGGCCGGGAATGGGT
62.470
55.000
2.18
0.00
0.00
4.51
5749
11274
2.871795
AAATGGGCCGGGAATGGGTC
62.872
60.000
2.18
0.00
0.00
4.46
5764
11289
3.122323
GTCGCCCGCGGATGAAAA
61.122
61.111
30.73
2.20
40.25
2.29
5765
11290
2.817834
TCGCCCGCGGATGAAAAG
60.818
61.111
30.73
9.14
40.25
2.27
5766
11291
4.536687
CGCCCGCGGATGAAAAGC
62.537
66.667
30.73
18.79
35.56
3.51
5771
11296
2.399611
GCGGATGAAAAGCGGACG
59.600
61.111
0.00
0.00
0.00
4.79
5772
11297
2.399611
CGGATGAAAAGCGGACGC
59.600
61.111
8.91
8.91
42.33
5.19
5796
11321
4.676586
GTTTGGGTCGGCGCGTTG
62.677
66.667
8.43
0.00
0.00
4.10
5809
11334
3.601685
CGTTGGGCCGCCTTTTGT
61.602
61.111
9.86
0.00
0.00
2.83
5810
11335
2.028925
GTTGGGCCGCCTTTTGTG
59.971
61.111
9.86
0.00
0.00
3.33
5811
11336
2.443016
TTGGGCCGCCTTTTGTGT
60.443
55.556
9.86
0.00
0.00
3.72
5812
11337
2.494530
TTGGGCCGCCTTTTGTGTC
61.495
57.895
9.86
0.00
0.00
3.67
5813
11338
3.680786
GGGCCGCCTTTTGTGTCC
61.681
66.667
9.86
0.00
0.00
4.02
5814
11339
4.038080
GGCCGCCTTTTGTGTCCG
62.038
66.667
0.71
0.00
0.00
4.79
5815
11340
4.700365
GCCGCCTTTTGTGTCCGC
62.700
66.667
0.00
0.00
0.00
5.54
5816
11341
4.383602
CCGCCTTTTGTGTCCGCG
62.384
66.667
0.00
0.00
42.37
6.46
5818
11343
4.700365
GCCTTTTGTGTCCGCGCC
62.700
66.667
0.00
0.00
0.00
6.53
5819
11344
4.383602
CCTTTTGTGTCCGCGCCG
62.384
66.667
0.00
0.00
0.00
6.46
5820
11345
3.342627
CTTTTGTGTCCGCGCCGA
61.343
61.111
0.00
0.00
0.00
5.54
5821
11346
3.573489
CTTTTGTGTCCGCGCCGAC
62.573
63.158
20.04
20.04
0.00
4.79
5835
11360
4.973055
CGACCCAAACGGACGCCA
62.973
66.667
0.00
0.00
42.69
5.69
5836
11361
3.047877
GACCCAAACGGACGCCAG
61.048
66.667
0.00
0.00
34.64
4.85
5846
11371
2.813908
GACGCCAGCGGACGAAAT
60.814
61.111
17.33
0.00
44.69
2.17
5847
11372
3.083600
GACGCCAGCGGACGAAATG
62.084
63.158
17.33
0.00
44.69
2.32
5848
11373
3.864686
CGCCAGCGGACGAAATGG
61.865
66.667
3.61
1.37
35.56
3.16
5849
11374
3.508840
GCCAGCGGACGAAATGGG
61.509
66.667
11.26
0.00
33.23
4.00
5850
11375
2.046314
CCAGCGGACGAAATGGGT
60.046
61.111
0.00
0.00
0.00
4.51
5851
11376
2.106683
CCAGCGGACGAAATGGGTC
61.107
63.158
0.00
0.00
0.00
4.46
5852
11377
2.125673
AGCGGACGAAATGGGTCG
60.126
61.111
0.00
0.00
46.54
4.79
5853
11378
3.861263
GCGGACGAAATGGGTCGC
61.861
66.667
0.00
0.00
45.00
5.19
5854
11379
3.192922
CGGACGAAATGGGTCGCC
61.193
66.667
0.00
0.00
45.00
5.54
5855
11380
2.822701
GGACGAAATGGGTCGCCC
60.823
66.667
7.87
7.87
45.00
6.13
5865
11390
2.355115
GGTCGCCCCATTGGAGTT
59.645
61.111
3.62
0.00
35.07
3.01
5866
11391
2.046285
GGTCGCCCCATTGGAGTTG
61.046
63.158
3.62
0.00
35.07
3.16
5867
11392
2.361104
TCGCCCCATTGGAGTTGC
60.361
61.111
3.62
0.53
35.07
4.17
5868
11393
2.361610
CGCCCCATTGGAGTTGCT
60.362
61.111
3.62
0.00
35.39
3.91
5869
11394
2.409870
CGCCCCATTGGAGTTGCTC
61.410
63.158
3.62
0.00
35.39
4.26
6214
11742
1.134946
GCTGTTTTCCTGTGTGCAACT
59.865
47.619
0.00
0.00
38.04
3.16
6218
11746
3.317711
TGTTTTCCTGTGTGCAACTATGG
59.682
43.478
0.00
0.00
38.04
2.74
6338
11866
3.739300
TGTTGTCTAGCGTTCAAGTTAGC
59.261
43.478
0.00
0.00
0.00
3.09
6493
12021
0.895530
TCGACAGGGCTTCAGTAAGG
59.104
55.000
0.00
0.00
32.98
2.69
6583
12111
8.718734
ACTGAATCCTACTTTCGAAATTAACAC
58.281
33.333
11.70
0.90
0.00
3.32
6959
12488
3.213506
CTTCGCCATGATTGTTCCCATA
58.786
45.455
0.00
0.00
0.00
2.74
6960
12489
3.289407
TCGCCATGATTGTTCCCATAA
57.711
42.857
0.00
0.00
0.00
1.90
6961
12490
2.948979
TCGCCATGATTGTTCCCATAAC
59.051
45.455
0.00
0.00
0.00
1.89
6962
12491
2.951642
CGCCATGATTGTTCCCATAACT
59.048
45.455
0.00
0.00
0.00
2.24
6963
12492
3.243168
CGCCATGATTGTTCCCATAACTG
60.243
47.826
0.00
0.00
0.00
3.16
6964
12493
3.491447
GCCATGATTGTTCCCATAACTGC
60.491
47.826
0.00
0.00
0.00
4.40
6965
12494
3.956199
CCATGATTGTTCCCATAACTGCT
59.044
43.478
0.00
0.00
0.00
4.24
6966
12495
4.202080
CCATGATTGTTCCCATAACTGCTG
60.202
45.833
0.00
0.00
0.00
4.41
6967
12496
2.754552
TGATTGTTCCCATAACTGCTGC
59.245
45.455
0.00
0.00
0.00
5.25
6968
12497
2.584835
TTGTTCCCATAACTGCTGCT
57.415
45.000
0.00
0.00
0.00
4.24
7083
12679
4.716794
AGGAGCTCTGGATTTTCATCATC
58.283
43.478
14.64
0.00
0.00
2.92
7100
12705
4.850859
TCATCGTGGTTAACTTAATGCG
57.149
40.909
5.42
2.33
0.00
4.73
7113
12718
3.989167
ACTTAATGCGCGTGTAAGTGTAA
59.011
39.130
23.97
10.40
36.85
2.41
7215
12860
1.824230
TGGAATTTGCCCTTTGATCCG
59.176
47.619
0.00
0.00
0.00
4.18
7255
12903
1.066573
CAGACGAGGTCTTGGAGCATT
60.067
52.381
0.00
0.00
41.37
3.56
7271
12919
3.454812
GAGCATTACCTTCTTCCCTGGTA
59.545
47.826
0.00
0.00
35.48
3.25
7280
12928
3.297134
TCTTCCCTGGTATGAATTGGC
57.703
47.619
0.00
0.00
0.00
4.52
7301
12949
3.059325
GCGCTCATACTCAAATGGTGATC
60.059
47.826
0.00
0.00
35.07
2.92
7314
12962
6.101588
TCAAATGGTGATCTTCATCCATCCTA
59.898
38.462
10.15
1.10
37.32
2.94
7345
12993
1.303643
CCAGGAGTCCAGGGCAAAC
60.304
63.158
12.87
0.00
0.00
2.93
7417
13065
0.617413
CTGCATGACTCTTGTCCCCT
59.383
55.000
0.00
0.00
42.28
4.79
7426
13074
2.530151
TTGTCCCCTGCTGCTCCT
60.530
61.111
0.00
0.00
0.00
3.69
7444
13092
1.558741
CTGCTCGATCACTTCTCTGC
58.441
55.000
0.00
0.00
0.00
4.26
7460
13108
1.001764
TGCTCATCCTGTGCTTGGG
60.002
57.895
3.27
0.00
37.71
4.12
7465
13113
3.335356
ATCCTGTGCTTGGGGCTCG
62.335
63.158
0.00
0.00
42.39
5.03
7467
13115
2.281761
CTGTGCTTGGGGCTCGTT
60.282
61.111
0.00
0.00
42.39
3.85
7542
13190
0.251297
CCATGAGGCCAACTCCAACA
60.251
55.000
5.01
0.00
46.01
3.33
7543
13191
0.883833
CATGAGGCCAACTCCAACAC
59.116
55.000
5.01
0.00
46.01
3.32
7544
13192
0.606401
ATGAGGCCAACTCCAACACG
60.606
55.000
5.01
0.00
46.01
4.49
7545
13193
2.594592
AGGCCAACTCCAACACGC
60.595
61.111
5.01
0.00
0.00
5.34
7546
13194
4.025401
GGCCAACTCCAACACGCG
62.025
66.667
3.53
3.53
0.00
6.01
7547
13195
2.970324
GCCAACTCCAACACGCGA
60.970
61.111
15.93
0.00
0.00
5.87
7548
13196
2.935955
CCAACTCCAACACGCGAC
59.064
61.111
15.93
0.00
0.00
5.19
7549
13197
2.604174
CCAACTCCAACACGCGACC
61.604
63.158
15.93
0.00
0.00
4.79
7550
13198
2.660552
AACTCCAACACGCGACCG
60.661
61.111
15.93
2.72
41.14
4.79
7553
13201
4.673298
TCCAACACGCGACCGCAT
62.673
61.111
15.93
0.00
42.06
4.73
7554
13202
3.722295
CCAACACGCGACCGCATT
61.722
61.111
15.93
2.79
42.06
3.56
7555
13203
2.251075
CAACACGCGACCGCATTT
59.749
55.556
15.93
1.17
42.06
2.32
7556
13204
2.074353
CAACACGCGACCGCATTTG
61.074
57.895
15.93
10.04
42.06
2.32
7557
13205
3.248630
AACACGCGACCGCATTTGG
62.249
57.895
15.93
0.18
42.06
3.28
7564
13212
2.747686
ACCGCATTTGGTCCGTCT
59.252
55.556
0.00
0.00
37.91
4.18
7565
13213
1.072505
ACCGCATTTGGTCCGTCTT
59.927
52.632
0.00
0.00
37.91
3.01
7566
13214
0.536460
ACCGCATTTGGTCCGTCTTT
60.536
50.000
0.00
0.00
37.91
2.52
7567
13215
0.109781
CCGCATTTGGTCCGTCTTTG
60.110
55.000
0.00
0.00
0.00
2.77
7568
13216
0.591170
CGCATTTGGTCCGTCTTTGT
59.409
50.000
0.00
0.00
0.00
2.83
7569
13217
1.001815
CGCATTTGGTCCGTCTTTGTT
60.002
47.619
0.00
0.00
0.00
2.83
7570
13218
2.542824
CGCATTTGGTCCGTCTTTGTTT
60.543
45.455
0.00
0.00
0.00
2.83
7592
13256
2.519002
TTCGATCAAAATCCAACGCG
57.481
45.000
3.53
3.53
0.00
6.01
7595
13259
0.451783
GATCAAAATCCAACGCGCCT
59.548
50.000
5.73
0.00
0.00
5.52
7611
13275
2.469516
CCTACGCAAACGGATGGGC
61.470
63.158
6.67
0.00
46.04
5.36
7623
13287
0.168128
GGATGGGCGTTCGTTTTCTG
59.832
55.000
0.00
0.00
0.00
3.02
7624
13288
0.872388
GATGGGCGTTCGTTTTCTGT
59.128
50.000
0.00
0.00
0.00
3.41
7631
13295
0.658897
GTTCGTTTTCTGTTCGCCCA
59.341
50.000
0.00
0.00
0.00
5.36
7632
13296
0.658897
TTCGTTTTCTGTTCGCCCAC
59.341
50.000
0.00
0.00
0.00
4.61
7633
13297
1.083015
CGTTTTCTGTTCGCCCACG
60.083
57.895
0.00
0.00
42.01
4.94
7715
13379
3.732849
CCCTTGTCCTCCCCCTGC
61.733
72.222
0.00
0.00
0.00
4.85
7740
13405
4.178169
TCGGGGGCACAACGTTGT
62.178
61.111
27.70
27.70
43.36
3.32
7757
13422
3.756117
GTTGTCATTTCCCCTTCTCACT
58.244
45.455
0.00
0.00
0.00
3.41
7811
13476
2.030562
CACCGCCTCAAAGGACGT
59.969
61.111
0.00
0.00
37.67
4.34
7814
13479
2.556287
CGCCTCAAAGGACGTTGC
59.444
61.111
0.00
0.00
37.67
4.17
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
72
79
1.878522
ATTCGGATCAGCGACGTGC
60.879
57.895
0.00
0.00
46.98
5.34
193
217
4.128643
GACGTGACCTAGCAGATACTACT
58.871
47.826
0.00
0.00
0.00
2.57
194
218
3.059733
CGACGTGACCTAGCAGATACTAC
60.060
52.174
0.00
0.00
0.00
2.73
195
219
3.129109
CGACGTGACCTAGCAGATACTA
58.871
50.000
0.00
0.00
0.00
1.82
356
550
6.979465
ACTCTCCGTATACTATTTTACAGCC
58.021
40.000
0.56
0.00
0.00
4.85
357
551
9.557338
CATACTCTCCGTATACTATTTTACAGC
57.443
37.037
0.56
0.00
36.69
4.40
452
653
0.171231
GAAGTTGAATGCCCGCTTCC
59.829
55.000
0.00
0.00
31.97
3.46
454
655
1.270550
CTTGAAGTTGAATGCCCGCTT
59.729
47.619
0.00
0.00
0.00
4.68
576
792
1.338107
ACCGTCTCTGTCACAATGGA
58.662
50.000
0.00
0.00
0.00
3.41
646
876
3.693085
AGAAAGATTACTACGAGTGCGGA
59.307
43.478
0.00
0.00
43.17
5.54
647
877
4.030134
AGAAAGATTACTACGAGTGCGG
57.970
45.455
0.00
0.00
43.17
5.69
648
878
5.333513
AGAAGAAAGATTACTACGAGTGCG
58.666
41.667
0.00
0.00
44.79
5.34
649
879
7.008810
CAGAAGAAGAAAGATTACTACGAGTGC
59.991
40.741
0.00
0.00
0.00
4.40
650
880
8.024285
ACAGAAGAAGAAAGATTACTACGAGTG
58.976
37.037
0.00
0.00
0.00
3.51
651
881
8.113173
ACAGAAGAAGAAAGATTACTACGAGT
57.887
34.615
0.00
0.00
0.00
4.18
652
882
7.427030
CGACAGAAGAAGAAAGATTACTACGAG
59.573
40.741
0.00
0.00
0.00
4.18
653
883
7.094890
ACGACAGAAGAAGAAAGATTACTACGA
60.095
37.037
0.00
0.00
0.00
3.43
654
884
7.007546
CACGACAGAAGAAGAAAGATTACTACG
59.992
40.741
0.00
0.00
0.00
3.51
675
905
0.028902
GGCTGACAAAACACCACGAC
59.971
55.000
0.00
0.00
0.00
4.34
698
928
1.587613
GCGCGTTTGGTCAGCAAAA
60.588
52.632
8.43
0.00
0.00
2.44
743
973
3.730761
GTGGTGCTGCTGCCTTCG
61.731
66.667
13.47
0.00
38.71
3.79
814
1044
1.529713
TTTTTGCGGACAGGGACCC
60.530
57.895
0.59
0.59
0.00
4.46
817
1047
3.739167
CGTTTTTGCGGACAGGGA
58.261
55.556
0.00
0.00
0.00
4.20
958
1721
0.952497
CGATGCAAGACACCAGCAGT
60.952
55.000
0.00
0.00
42.14
4.40
973
1736
4.271816
CTCCCGTCCGCTCCGATG
62.272
72.222
0.00
0.00
0.00
3.84
1012
1775
2.202987
GCCGGACATGCAGGAGAG
60.203
66.667
5.05
0.00
33.08
3.20
1014
1777
2.821366
GTGCCGGACATGCAGGAG
60.821
66.667
5.05
0.00
39.87
3.69
1167
1933
4.388499
TCAAACGCGCCTCCTCCC
62.388
66.667
5.73
0.00
0.00
4.30
1320
2086
1.442526
GGAAGACGACGGGCTCGATA
61.443
60.000
15.95
0.00
46.14
2.92
1321
2087
2.772691
GGAAGACGACGGGCTCGAT
61.773
63.158
15.95
0.00
46.14
3.59
1322
2088
3.437795
GGAAGACGACGGGCTCGA
61.438
66.667
15.95
0.00
46.14
4.04
1324
2090
2.490685
GAGGAAGACGACGGGCTC
59.509
66.667
0.00
0.00
0.00
4.70
1325
2091
3.069318
GGAGGAAGACGACGGGCT
61.069
66.667
0.00
0.00
0.00
5.19
1326
2092
3.066233
GAGGAGGAAGACGACGGGC
62.066
68.421
0.00
0.00
0.00
6.13
1333
2099
1.478916
CGAAGGAAGGAGGAGGAAGAC
59.521
57.143
0.00
0.00
0.00
3.01
1391
2162
2.030958
CCACGCGGACCAACTAACC
61.031
63.158
12.47
0.00
0.00
2.85
1409
2181
1.081509
TCAAAATTCCACGCAGCGC
60.082
52.632
16.61
0.00
0.00
5.92
1438
2210
4.451900
ACGAGTGAAGGAAAAGTCAACAT
58.548
39.130
0.00
0.00
0.00
2.71
1510
2291
2.804828
AAACTAGGCAGCCGCAGACC
62.805
60.000
19.84
0.00
41.24
3.85
1538
2324
0.830444
TTAGGTGGAGACGGCACTGT
60.830
55.000
0.00
0.00
0.00
3.55
1539
2325
0.537188
ATTAGGTGGAGACGGCACTG
59.463
55.000
0.00
0.00
0.00
3.66
1540
2326
1.276622
AATTAGGTGGAGACGGCACT
58.723
50.000
0.00
0.00
0.00
4.40
1541
2327
2.109425
AAATTAGGTGGAGACGGCAC
57.891
50.000
0.00
0.00
0.00
5.01
1542
2328
2.817258
CAAAAATTAGGTGGAGACGGCA
59.183
45.455
0.00
0.00
0.00
5.69
1544
2330
2.752903
CCCAAAAATTAGGTGGAGACGG
59.247
50.000
4.02
0.00
34.05
4.79
1547
2333
3.773560
CACCCCAAAAATTAGGTGGAGA
58.226
45.455
0.00
0.00
44.95
3.71
1621
2423
4.035017
GCGATGAACAATTCAAATACCGG
58.965
43.478
0.00
0.00
43.95
5.28
1626
2443
5.990996
ACCAAAAGCGATGAACAATTCAAAT
59.009
32.000
0.00
0.00
43.95
2.32
1658
2475
6.403527
CGAATTACTTGTCCATCTCAATGCAA
60.404
38.462
0.00
0.00
0.00
4.08
1661
2478
6.668541
ACGAATTACTTGTCCATCTCAATG
57.331
37.500
0.00
0.00
0.00
2.82
1686
2503
1.471287
GGGGGCAACGTAGAATTGAAC
59.529
52.381
0.00
0.00
37.60
3.18
1758
2593
1.895020
ATCGCAGTAGGCACCGGAAA
61.895
55.000
9.46
0.00
45.17
3.13
1763
2598
0.105039
AGCTAATCGCAGTAGGCACC
59.895
55.000
0.00
0.00
45.17
5.01
1813
2807
4.881850
AGTAGCTTGGCATATGGTTTACAC
59.118
41.667
4.56
0.00
0.00
2.90
1819
2815
2.486191
GCTCAGTAGCTTGGCATATGGT
60.486
50.000
4.56
0.00
45.85
3.55
1862
2858
2.145536
ACCGTGGTTTCCAAATACGTC
58.854
47.619
0.00
0.00
34.18
4.34
2008
3004
1.137872
CCTCGTCCCTTCTCCAGAATG
59.862
57.143
0.00
0.00
33.01
2.67
2125
3122
5.809562
ACAGCAACAAACATTTGATTTCGAA
59.190
32.000
11.24
0.00
40.55
3.71
2296
3293
5.989168
TGAAAATGTCAGACACGAACTACAT
59.011
36.000
5.05
0.00
0.00
2.29
2353
3350
4.178540
TGGCGTGCTAATTCAGTTACTAC
58.821
43.478
0.00
0.00
0.00
2.73
2355
3352
3.328382
TGGCGTGCTAATTCAGTTACT
57.672
42.857
0.00
0.00
0.00
2.24
2388
3385
6.315891
CCAGTGATTCAAAAACAAAACACCAT
59.684
34.615
0.00
0.00
0.00
3.55
2403
3401
4.669206
ATGTTTGTTTGCCAGTGATTCA
57.331
36.364
0.00
0.00
0.00
2.57
2548
3546
3.265791
ACAACTCTGAAAGATCCGCATC
58.734
45.455
0.00
0.00
45.62
3.91
2553
3551
8.785329
AATCTTAGAACAACTCTGAAAGATCC
57.215
34.615
0.00
0.00
45.62
3.36
2557
3555
8.824159
TGAGAATCTTAGAACAACTCTGAAAG
57.176
34.615
0.00
0.00
33.47
2.62
2685
3683
5.701029
AACAACGCTGAAACATCTTTTTG
57.299
34.783
0.00
0.00
0.00
2.44
2723
3722
8.467963
AAGATGGTTATATGAATGCAATGACA
57.532
30.769
0.00
0.00
0.00
3.58
2996
3997
4.402155
AGAACAAACCTTTTCAGCATCACA
59.598
37.500
0.00
0.00
0.00
3.58
3224
4225
6.966534
AATTGATTCCAAAACACTGAGAGT
57.033
33.333
0.00
0.00
35.67
3.24
3225
4226
9.350357
CATAAATTGATTCCAAAACACTGAGAG
57.650
33.333
0.00
0.00
35.67
3.20
3254
4255
1.534175
CGTAACGCTCAGACTCCATCC
60.534
57.143
0.00
0.00
0.00
3.51
3269
4270
1.534163
GCCCAGACTTCAAACCGTAAC
59.466
52.381
0.00
0.00
0.00
2.50
3341
4342
3.057876
CACAGACACAGACACTCTAGGAC
60.058
52.174
0.00
0.00
0.00
3.85
3354
4355
0.663269
GATCGCACGACACAGACACA
60.663
55.000
0.00
0.00
0.00
3.72
3403
4404
2.202878
GCAGCAAGCATGGCCATG
60.203
61.111
36.80
36.80
44.79
3.66
3627
4630
6.183360
TGCAATTTCATCAATGCAAAATAGGC
60.183
34.615
0.00
0.01
30.58
3.93
3657
4715
9.620660
ATTTTATTCGGTTCAAACTATGTTCAC
57.379
29.630
0.00
0.00
0.00
3.18
3814
4941
2.198827
TGCGTGATTGGGAAACTCAT
57.801
45.000
0.00
0.00
0.00
2.90
3837
4964
6.718912
TGAACAGTTCACCCAATTTCATCATA
59.281
34.615
12.24
0.00
34.08
2.15
3984
9480
1.352352
AGAAACTGTGGGAGGTGATGG
59.648
52.381
0.00
0.00
0.00
3.51
4202
9704
1.202710
TGTCAATGGCCACAACTACGT
60.203
47.619
8.16
0.00
0.00
3.57
4350
9853
0.464036
CATACTAGAGGCCGTGGCAA
59.536
55.000
13.76
0.00
44.11
4.52
4421
9924
1.623811
GCACTGGGAGTGGAAGAACTA
59.376
52.381
5.90
0.00
46.01
2.24
5105
10630
4.373116
GCACCGCGACTCCCTTCA
62.373
66.667
8.23
0.00
0.00
3.02
5130
10655
3.790437
GGCAGGGCAGCTAGCTGA
61.790
66.667
41.87
0.00
46.30
4.26
5710
11235
1.363145
TTAAGCCGGATTTGCGTCGG
61.363
55.000
11.69
0.00
45.84
4.79
5711
11236
0.444651
TTTAAGCCGGATTTGCGTCG
59.555
50.000
11.69
0.00
0.00
5.12
5712
11237
2.622546
TTTTAAGCCGGATTTGCGTC
57.377
45.000
11.69
0.00
0.00
5.19
5713
11238
3.249917
CATTTTTAAGCCGGATTTGCGT
58.750
40.909
11.69
0.00
0.00
5.24
5714
11239
2.602660
CCATTTTTAAGCCGGATTTGCG
59.397
45.455
11.69
0.00
0.00
4.85
5715
11240
2.935849
CCCATTTTTAAGCCGGATTTGC
59.064
45.455
11.69
0.00
0.00
3.68
5716
11241
2.935849
GCCCATTTTTAAGCCGGATTTG
59.064
45.455
11.69
1.40
0.00
2.32
5717
11242
2.093181
GGCCCATTTTTAAGCCGGATTT
60.093
45.455
11.69
3.16
35.30
2.17
5718
11243
1.484653
GGCCCATTTTTAAGCCGGATT
59.515
47.619
11.03
11.03
35.30
3.01
5719
11244
1.119684
GGCCCATTTTTAAGCCGGAT
58.880
50.000
5.05
0.00
35.30
4.18
5720
11245
2.585876
GGCCCATTTTTAAGCCGGA
58.414
52.632
5.05
0.00
35.30
5.14
5723
11248
0.973496
TCCCGGCCCATTTTTAAGCC
60.973
55.000
0.00
0.00
42.18
4.35
5724
11249
0.899019
TTCCCGGCCCATTTTTAAGC
59.101
50.000
0.00
0.00
0.00
3.09
5725
11250
2.158971
CCATTCCCGGCCCATTTTTAAG
60.159
50.000
0.00
0.00
0.00
1.85
5726
11251
1.834263
CCATTCCCGGCCCATTTTTAA
59.166
47.619
0.00
0.00
0.00
1.52
5727
11252
1.490574
CCATTCCCGGCCCATTTTTA
58.509
50.000
0.00
0.00
0.00
1.52
5728
11253
1.271127
CCCATTCCCGGCCCATTTTT
61.271
55.000
0.00
0.00
0.00
1.94
5729
11254
1.688884
CCCATTCCCGGCCCATTTT
60.689
57.895
0.00
0.00
0.00
1.82
5730
11255
2.042025
CCCATTCCCGGCCCATTT
60.042
61.111
0.00
0.00
0.00
2.32
5731
11256
3.355344
ACCCATTCCCGGCCCATT
61.355
61.111
0.00
0.00
0.00
3.16
5732
11257
3.820843
GACCCATTCCCGGCCCAT
61.821
66.667
0.00
0.00
0.00
4.00
5747
11272
3.095898
CTTTTCATCCGCGGGCGAC
62.096
63.158
27.83
0.00
42.83
5.19
5748
11273
2.817834
CTTTTCATCCGCGGGCGA
60.818
61.111
27.83
19.32
42.83
5.54
5749
11274
4.536687
GCTTTTCATCCGCGGGCG
62.537
66.667
27.83
17.07
39.44
6.13
5750
11275
4.536687
CGCTTTTCATCCGCGGGC
62.537
66.667
27.83
17.79
42.88
6.13
5753
11278
2.399611
GTCCGCTTTTCATCCGCG
59.600
61.111
0.00
0.00
45.86
6.46
5754
11279
2.399611
CGTCCGCTTTTCATCCGC
59.600
61.111
0.00
0.00
0.00
5.54
5755
11280
2.399611
GCGTCCGCTTTTCATCCG
59.600
61.111
4.10
0.00
38.26
4.18
5756
11281
2.399611
CGCGTCCGCTTTTCATCC
59.600
61.111
10.21
0.00
39.32
3.51
5779
11304
4.676586
CAACGCGCCGACCCAAAC
62.677
66.667
5.73
0.00
0.00
2.93
5792
11317
3.601685
ACAAAAGGCGGCCCAACG
61.602
61.111
17.02
4.91
0.00
4.10
5793
11318
2.028925
CACAAAAGGCGGCCCAAC
59.971
61.111
17.02
0.00
0.00
3.77
5794
11319
2.443016
ACACAAAAGGCGGCCCAA
60.443
55.556
17.02
0.00
0.00
4.12
5795
11320
2.909965
GACACAAAAGGCGGCCCA
60.910
61.111
17.02
0.00
0.00
5.36
5796
11321
3.680786
GGACACAAAAGGCGGCCC
61.681
66.667
17.02
0.00
0.00
5.80
5797
11322
4.038080
CGGACACAAAAGGCGGCC
62.038
66.667
12.11
12.11
0.00
6.13
5798
11323
4.700365
GCGGACACAAAAGGCGGC
62.700
66.667
0.00
0.00
0.00
6.53
5799
11324
4.383602
CGCGGACACAAAAGGCGG
62.384
66.667
0.00
0.00
42.86
6.13
5801
11326
4.700365
GGCGCGGACACAAAAGGC
62.700
66.667
8.83
0.00
0.00
4.35
5802
11327
4.383602
CGGCGCGGACACAAAAGG
62.384
66.667
9.72
0.00
0.00
3.11
5803
11328
3.342627
TCGGCGCGGACACAAAAG
61.343
61.111
14.27
0.00
0.00
2.27
5804
11329
3.641986
GTCGGCGCGGACACAAAA
61.642
61.111
34.74
4.76
36.91
2.44
5819
11344
3.047877
CTGGCGTCCGTTTGGGTC
61.048
66.667
0.00
0.00
37.00
4.46
5829
11354
2.813908
ATTTCGTCCGCTGGCGTC
60.814
61.111
13.84
5.90
37.81
5.19
5830
11355
3.118454
CATTTCGTCCGCTGGCGT
61.118
61.111
13.84
0.00
37.81
5.68
5831
11356
3.864686
CCATTTCGTCCGCTGGCG
61.865
66.667
8.08
8.08
39.44
5.69
5832
11357
3.508840
CCCATTTCGTCCGCTGGC
61.509
66.667
0.00
0.00
0.00
4.85
5833
11358
2.046314
ACCCATTTCGTCCGCTGG
60.046
61.111
0.00
0.00
0.00
4.85
5834
11359
2.452813
CGACCCATTTCGTCCGCTG
61.453
63.158
0.00
0.00
34.16
5.18
5835
11360
2.125673
CGACCCATTTCGTCCGCT
60.126
61.111
0.00
0.00
34.16
5.52
5836
11361
3.861263
GCGACCCATTTCGTCCGC
61.861
66.667
0.00
0.00
41.26
5.54
5837
11362
3.192922
GGCGACCCATTTCGTCCG
61.193
66.667
0.00
0.00
41.26
4.79
5849
11374
2.700773
GCAACTCCAATGGGGCGAC
61.701
63.158
0.00
0.00
36.21
5.19
5850
11375
2.361104
GCAACTCCAATGGGGCGA
60.361
61.111
0.00
0.00
36.21
5.54
5851
11376
2.361610
AGCAACTCCAATGGGGCG
60.362
61.111
0.00
0.00
36.21
6.13
5852
11377
0.613012
AAGAGCAACTCCAATGGGGC
60.613
55.000
0.00
0.00
36.21
5.80
5853
11378
2.806945
TAAGAGCAACTCCAATGGGG
57.193
50.000
0.00
0.00
38.37
4.96
5854
11379
4.019174
ACATTAAGAGCAACTCCAATGGG
58.981
43.478
17.18
0.00
37.55
4.00
5855
11380
6.319658
ACATACATTAAGAGCAACTCCAATGG
59.680
38.462
17.18
0.00
37.55
3.16
5856
11381
7.191551
CACATACATTAAGAGCAACTCCAATG
58.808
38.462
13.74
13.74
38.38
2.82
5857
11382
6.183360
GCACATACATTAAGAGCAACTCCAAT
60.183
38.462
0.00
0.00
0.00
3.16
5858
11383
5.123820
GCACATACATTAAGAGCAACTCCAA
59.876
40.000
0.00
0.00
0.00
3.53
5859
11384
4.635765
GCACATACATTAAGAGCAACTCCA
59.364
41.667
0.00
0.00
0.00
3.86
5860
11385
4.635765
TGCACATACATTAAGAGCAACTCC
59.364
41.667
0.00
0.00
0.00
3.85
5861
11386
5.801350
TGCACATACATTAAGAGCAACTC
57.199
39.130
0.00
0.00
0.00
3.01
5862
11387
6.764308
ATTGCACATACATTAAGAGCAACT
57.236
33.333
0.00
0.00
42.37
3.16
5863
11388
7.816945
AAATTGCACATACATTAAGAGCAAC
57.183
32.000
0.00
0.00
42.37
4.17
6027
11552
5.623956
AATATCACAAACGGGGATCAGTA
57.376
39.130
0.00
0.00
0.00
2.74
6032
11557
4.097892
GCAAGAAATATCACAAACGGGGAT
59.902
41.667
0.00
0.00
0.00
3.85
6037
11562
4.321745
GCACAGCAAGAAATATCACAAACG
59.678
41.667
0.00
0.00
0.00
3.60
6214
11742
4.881273
GCACTATGTCCATTTGTCACCATA
59.119
41.667
0.00
0.00
0.00
2.74
6218
11746
4.256920
AGAGCACTATGTCCATTTGTCAC
58.743
43.478
0.00
0.00
0.00
3.67
6338
11866
7.585867
CATCAGGCAGAATCTTTGAAGATATG
58.414
38.462
6.66
9.62
44.67
1.78
6380
11908
6.040054
CCATTTGTATCCATCTGAAGCAATGA
59.960
38.462
0.00
0.00
0.00
2.57
6493
12021
5.946377
AGGACTTTGGTTGAATAACAGATCC
59.054
40.000
0.00
0.00
38.58
3.36
6583
12111
0.968405
CAAATGGGGTGGGTGTGAAG
59.032
55.000
0.00
0.00
0.00
3.02
6629
12157
1.694696
GGGATAGGTCTCATGGACACC
59.305
57.143
13.95
8.16
46.16
4.16
6881
12409
0.461516
CTCATGATGCCTGTGCTCGT
60.462
55.000
0.00
0.00
38.71
4.18
6938
12467
1.462616
TGGGAACAATCATGGCGAAG
58.537
50.000
0.00
0.00
37.44
3.79
6939
12468
3.660343
TGGGAACAATCATGGCGAA
57.340
47.368
0.00
0.00
37.44
4.70
6964
12493
0.108472
TACAGCAGCAGCAGTAGCAG
60.108
55.000
3.17
0.00
45.49
4.24
6965
12494
0.538584
ATACAGCAGCAGCAGTAGCA
59.461
50.000
11.74
0.00
44.40
3.49
6966
12495
2.515926
TATACAGCAGCAGCAGTAGC
57.484
50.000
11.74
0.00
44.40
3.58
6967
12496
5.277683
CCAAAATATACAGCAGCAGCAGTAG
60.278
44.000
11.74
0.00
44.40
2.57
6968
12497
4.576053
CCAAAATATACAGCAGCAGCAGTA
59.424
41.667
8.73
8.73
45.10
2.74
7045
12595
2.034558
GCTCCTACTCTGCTGCTTAGAG
59.965
54.545
13.64
13.64
45.59
2.43
7047
12597
2.031120
AGCTCCTACTCTGCTGCTTAG
58.969
52.381
0.00
0.51
35.54
2.18
7083
12679
1.127213
ACGCGCATTAAGTTAACCACG
59.873
47.619
5.73
3.74
0.00
4.94
7100
12705
3.120782
GCAGTACACTTACACTTACACGC
59.879
47.826
0.00
0.00
0.00
5.34
7113
12718
3.432749
CCTCATATTGGCTGCAGTACACT
60.433
47.826
16.64
11.48
0.00
3.55
7255
12903
5.104109
CCAATTCATACCAGGGAAGAAGGTA
60.104
44.000
0.00
0.00
41.72
3.08
7271
12919
3.198409
TGAGTATGAGCGCCAATTCAT
57.802
42.857
13.55
13.55
37.73
2.57
7280
12928
4.375272
AGATCACCATTTGAGTATGAGCG
58.625
43.478
0.00
0.00
37.77
5.03
7301
12949
5.411977
GCATGAAGATGTAGGATGGATGAAG
59.588
44.000
0.00
0.00
31.50
3.02
7314
12962
2.170187
GACTCCTGGAGCATGAAGATGT
59.830
50.000
23.43
0.33
32.04
3.06
7373
13021
0.895559
AGCCCTAGTTTGCAACCTGC
60.896
55.000
6.78
1.64
45.29
4.85
7417
13065
2.353610
TGATCGAGCAGGAGCAGCA
61.354
57.895
0.00
0.00
45.49
4.41
7426
13074
1.133982
GAGCAGAGAAGTGATCGAGCA
59.866
52.381
0.00
0.00
0.00
4.26
7444
13092
1.751927
GCCCCAAGCACAGGATGAG
60.752
63.158
0.00
0.00
42.97
2.90
7460
13108
1.710339
GATGTCGAGCAAACGAGCC
59.290
57.895
0.00
0.00
42.88
4.70
7465
13113
1.993370
AGTTAGCGATGTCGAGCAAAC
59.007
47.619
6.60
4.47
43.02
2.93
7467
13115
3.435566
CTTAGTTAGCGATGTCGAGCAA
58.564
45.455
6.60
0.00
43.02
3.91
7542
13190
3.419759
GACCAAATGCGGTCGCGT
61.420
61.111
5.77
7.58
45.77
6.01
7550
13198
2.793278
AACAAAGACGGACCAAATGC
57.207
45.000
0.00
0.00
0.00
3.56
7551
13199
4.040445
ACAAACAAAGACGGACCAAATG
57.960
40.909
0.00
0.00
0.00
2.32
7552
13200
4.729227
AACAAACAAAGACGGACCAAAT
57.271
36.364
0.00
0.00
0.00
2.32
7553
13201
4.487019
GAAACAAACAAAGACGGACCAAA
58.513
39.130
0.00
0.00
0.00
3.28
7554
13202
3.426426
CGAAACAAACAAAGACGGACCAA
60.426
43.478
0.00
0.00
0.00
3.67
7555
13203
2.096174
CGAAACAAACAAAGACGGACCA
59.904
45.455
0.00
0.00
0.00
4.02
7556
13204
2.352342
TCGAAACAAACAAAGACGGACC
59.648
45.455
0.00
0.00
0.00
4.46
7557
13205
3.661758
TCGAAACAAACAAAGACGGAC
57.338
42.857
0.00
0.00
0.00
4.79
7558
13206
3.872182
TGATCGAAACAAACAAAGACGGA
59.128
39.130
0.00
0.00
0.00
4.69
7559
13207
4.203950
TGATCGAAACAAACAAAGACGG
57.796
40.909
0.00
0.00
0.00
4.79
7560
13208
6.547493
TTTTGATCGAAACAAACAAAGACG
57.453
33.333
16.71
0.00
37.05
4.18
7561
13209
7.221838
TGGATTTTGATCGAAACAAACAAAGAC
59.778
33.333
10.38
8.23
37.05
3.01
7562
13210
7.261325
TGGATTTTGATCGAAACAAACAAAGA
58.739
30.769
10.38
6.49
37.05
2.52
7563
13211
7.462109
TGGATTTTGATCGAAACAAACAAAG
57.538
32.000
10.38
0.00
37.05
2.77
7564
13212
7.463383
CGTTGGATTTTGATCGAAACAAACAAA
60.463
33.333
10.38
8.23
37.05
2.83
7565
13213
6.020281
CGTTGGATTTTGATCGAAACAAACAA
60.020
34.615
10.38
14.86
37.05
2.83
7566
13214
5.457148
CGTTGGATTTTGATCGAAACAAACA
59.543
36.000
10.38
11.14
37.05
2.83
7567
13215
5.609483
GCGTTGGATTTTGATCGAAACAAAC
60.609
40.000
10.38
12.88
37.05
2.93
7568
13216
4.442733
GCGTTGGATTTTGATCGAAACAAA
59.557
37.500
10.38
14.20
35.81
2.83
7569
13217
3.978217
GCGTTGGATTTTGATCGAAACAA
59.022
39.130
10.38
8.51
0.00
2.83
7570
13218
3.560503
GCGTTGGATTTTGATCGAAACA
58.439
40.909
10.38
2.72
0.00
2.83
7592
13256
2.469516
CCCATCCGTTTGCGTAGGC
61.470
63.158
0.00
0.00
40.52
3.93
7595
13259
2.816083
CGCCCATCCGTTTGCGTA
60.816
61.111
0.00
0.00
41.95
4.42
7611
13275
0.383860
GGGCGAACAGAAAACGAACG
60.384
55.000
0.00
0.00
0.00
3.95
7631
13295
0.678366
TTGGGCCATAAATGCGTCGT
60.678
50.000
7.26
0.00
0.00
4.34
7632
13296
0.453793
TTTGGGCCATAAATGCGTCG
59.546
50.000
7.26
0.00
0.00
5.12
7633
13297
2.888834
ATTTGGGCCATAAATGCGTC
57.111
45.000
7.26
0.00
0.00
5.19
7669
13333
0.777631
CACATGTTCGCGCTTTTTGG
59.222
50.000
5.56
0.00
0.00
3.28
7680
13344
2.860293
CGCGTGTCCCACATGTTC
59.140
61.111
0.00
0.00
37.43
3.18
7740
13405
4.722526
TTTGAGTGAGAAGGGGAAATGA
57.277
40.909
0.00
0.00
0.00
2.57
7846
13511
0.675522
TTCTTCTTTAAGGCCGCGGG
60.676
55.000
29.38
8.29
33.22
6.13
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.