Multiple sequence alignment - TraesCS2D01G181200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G181200 chr2D 100.000 1953 0 0 924 2876 125513166 125511214 0.000000e+00 3607.0
1 TraesCS2D01G181200 chr2D 100.000 543 0 0 1 543 125514089 125513547 0.000000e+00 1003.0
2 TraesCS2D01G181200 chr2D 96.104 77 2 1 1070 1146 586467509 586467584 1.080000e-24 124.0
3 TraesCS2D01G181200 chr2B 91.617 668 33 9 1145 1812 178857769 178857125 0.000000e+00 902.0
4 TraesCS2D01G181200 chr2B 88.986 572 40 11 2327 2876 178831456 178830886 0.000000e+00 686.0
5 TraesCS2D01G181200 chr2B 93.103 290 15 3 1941 2227 178857060 178856773 1.230000e-113 420.0
6 TraesCS2D01G181200 chr2B 90.288 278 22 2 225 502 178858177 178857905 2.720000e-95 359.0
7 TraesCS2D01G181200 chr2B 97.656 128 2 1 933 1060 178857888 178857762 4.820000e-53 219.0
8 TraesCS2D01G181200 chr2B 92.241 116 7 2 1145 1259 388889143 388889029 2.290000e-36 163.0
9 TraesCS2D01G181200 chr2B 93.617 94 5 1 1849 1942 178857125 178857033 3.860000e-29 139.0
10 TraesCS2D01G181200 chr2A 82.245 1087 104 45 1831 2876 131898130 131897092 0.000000e+00 856.0
11 TraesCS2D01G181200 chr2A 96.226 53 2 0 1349 1401 756837353 756837405 1.420000e-13 87.9
12 TraesCS2D01G181200 chr5A 90.462 346 33 0 1145 1490 170832940 170832595 9.390000e-125 457.0
13 TraesCS2D01G181200 chr5A 100.000 30 0 0 1037 1066 170832956 170832927 4.000000e-04 56.5
14 TraesCS2D01G181200 chr1D 89.147 258 17 4 1406 1662 417918220 417917973 7.740000e-81 311.0
15 TraesCS2D01G181200 chr7D 96.341 82 1 2 1067 1146 633198043 633197962 1.800000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G181200 chr2D 125511214 125514089 2875 True 2305.0 3607 100.0000 1 2876 2 chr2D.!!$R1 2875
1 TraesCS2D01G181200 chr2B 178830886 178831456 570 True 686.0 686 88.9860 2327 2876 1 chr2B.!!$R1 549
2 TraesCS2D01G181200 chr2B 178856773 178858177 1404 True 407.8 902 93.2562 225 2227 5 chr2B.!!$R3 2002
3 TraesCS2D01G181200 chr2A 131897092 131898130 1038 True 856.0 856 82.2450 1831 2876 1 chr2A.!!$R1 1045

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.109412 GCACCGACGCTACAGTAAGT 60.109 55.0 0.00 0.00 0.00 2.24 F
275 276 0.321387 GGGAGTCCGTGGGAGAAAAC 60.321 60.0 2.26 0.00 29.39 2.43 F
441 442 0.524392 GATCGAGTCACGTGGCTCAG 60.524 60.0 40.00 32.34 46.59 3.35 F
1157 1158 0.259356 AACGGGAAAGACCAAACCCA 59.741 50.0 0.00 0.00 42.16 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1139 1140 0.179001 CTGGGTTTGGTCTTTCCCGT 60.179 55.0 0.00 0.00 42.54 5.28 R
1140 1141 0.179001 ACTGGGTTTGGTCTTTCCCG 60.179 55.0 0.00 0.00 42.54 5.14 R
1629 1630 0.249322 CACGGAGGTCGCGGAAATAT 60.249 55.0 6.13 0.00 43.89 1.28 R
2692 2736 0.034896 AAACGAGGCTCGGACATTGT 59.965 50.0 36.81 14.65 45.59 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.308899 ACAGTATCGTAACATGCCTCTC 57.691 45.455 0.00 0.00 0.00 3.20
22 23 3.954904 ACAGTATCGTAACATGCCTCTCT 59.045 43.478 0.00 0.00 0.00 3.10
23 24 4.402793 ACAGTATCGTAACATGCCTCTCTT 59.597 41.667 0.00 0.00 0.00 2.85
24 25 5.105310 ACAGTATCGTAACATGCCTCTCTTT 60.105 40.000 0.00 0.00 0.00 2.52
25 26 5.812642 CAGTATCGTAACATGCCTCTCTTTT 59.187 40.000 0.00 0.00 0.00 2.27
26 27 6.978659 CAGTATCGTAACATGCCTCTCTTTTA 59.021 38.462 0.00 0.00 0.00 1.52
27 28 7.168302 CAGTATCGTAACATGCCTCTCTTTTAG 59.832 40.741 0.00 0.00 0.00 1.85
28 29 4.181578 TCGTAACATGCCTCTCTTTTAGC 58.818 43.478 0.00 0.00 0.00 3.09
29 30 3.309954 CGTAACATGCCTCTCTTTTAGCC 59.690 47.826 0.00 0.00 0.00 3.93
30 31 3.439857 AACATGCCTCTCTTTTAGCCA 57.560 42.857 0.00 0.00 0.00 4.75
31 32 3.659183 ACATGCCTCTCTTTTAGCCAT 57.341 42.857 0.00 0.00 0.00 4.40
32 33 3.549794 ACATGCCTCTCTTTTAGCCATC 58.450 45.455 0.00 0.00 0.00 3.51
33 34 2.717639 TGCCTCTCTTTTAGCCATCC 57.282 50.000 0.00 0.00 0.00 3.51
34 35 1.134401 TGCCTCTCTTTTAGCCATCCG 60.134 52.381 0.00 0.00 0.00 4.18
35 36 1.139058 GCCTCTCTTTTAGCCATCCGA 59.861 52.381 0.00 0.00 0.00 4.55
36 37 2.827652 CCTCTCTTTTAGCCATCCGAC 58.172 52.381 0.00 0.00 0.00 4.79
37 38 2.432510 CCTCTCTTTTAGCCATCCGACT 59.567 50.000 0.00 0.00 0.00 4.18
38 39 3.452474 CTCTCTTTTAGCCATCCGACTG 58.548 50.000 0.00 0.00 0.00 3.51
39 40 3.096852 TCTCTTTTAGCCATCCGACTGA 58.903 45.455 0.00 0.00 0.00 3.41
40 41 3.513912 TCTCTTTTAGCCATCCGACTGAA 59.486 43.478 0.00 0.00 0.00 3.02
41 42 3.861840 TCTTTTAGCCATCCGACTGAAG 58.138 45.455 0.00 0.00 0.00 3.02
42 43 3.513912 TCTTTTAGCCATCCGACTGAAGA 59.486 43.478 0.00 0.00 0.00 2.87
43 44 4.162320 TCTTTTAGCCATCCGACTGAAGAT 59.838 41.667 0.00 0.00 0.00 2.40
44 45 3.735237 TTAGCCATCCGACTGAAGATC 57.265 47.619 0.00 0.00 0.00 2.75
45 46 1.489481 AGCCATCCGACTGAAGATCA 58.511 50.000 0.00 0.00 0.00 2.92
46 47 1.833630 AGCCATCCGACTGAAGATCAA 59.166 47.619 0.00 0.00 0.00 2.57
47 48 1.936547 GCCATCCGACTGAAGATCAAC 59.063 52.381 0.00 0.00 0.00 3.18
48 49 2.196749 CCATCCGACTGAAGATCAACG 58.803 52.381 0.00 0.00 0.00 4.10
49 50 2.196749 CATCCGACTGAAGATCAACGG 58.803 52.381 14.93 14.93 42.99 4.44
50 51 0.530744 TCCGACTGAAGATCAACGGG 59.469 55.000 18.45 5.36 42.39 5.28
51 52 0.246635 CCGACTGAAGATCAACGGGT 59.753 55.000 13.90 0.00 40.26 5.28
52 53 1.630148 CGACTGAAGATCAACGGGTC 58.370 55.000 0.00 1.21 0.00 4.46
53 54 1.067846 CGACTGAAGATCAACGGGTCA 60.068 52.381 0.00 0.00 0.00 4.02
54 55 2.611518 GACTGAAGATCAACGGGTCAG 58.388 52.381 0.00 0.00 41.21 3.51
55 56 2.231478 GACTGAAGATCAACGGGTCAGA 59.769 50.000 6.01 0.00 38.37 3.27
56 57 2.834549 ACTGAAGATCAACGGGTCAGAT 59.165 45.455 6.01 0.00 38.37 2.90
57 58 3.118956 ACTGAAGATCAACGGGTCAGATC 60.119 47.826 6.01 0.00 38.37 2.75
58 59 2.168521 TGAAGATCAACGGGTCAGATCC 59.831 50.000 0.00 0.00 39.10 3.36
59 60 1.866015 AGATCAACGGGTCAGATCCA 58.134 50.000 0.00 0.00 39.10 3.41
60 61 2.402564 AGATCAACGGGTCAGATCCAT 58.597 47.619 0.00 0.00 39.10 3.41
61 62 2.774234 AGATCAACGGGTCAGATCCATT 59.226 45.455 0.00 0.00 39.10 3.16
62 63 3.200825 AGATCAACGGGTCAGATCCATTT 59.799 43.478 0.00 0.00 39.10 2.32
63 64 2.710377 TCAACGGGTCAGATCCATTTG 58.290 47.619 0.00 2.69 0.00 2.32
64 65 2.304470 TCAACGGGTCAGATCCATTTGA 59.696 45.455 9.02 9.02 31.67 2.69
65 66 3.081061 CAACGGGTCAGATCCATTTGAA 58.919 45.455 0.00 0.00 0.00 2.69
66 67 2.711542 ACGGGTCAGATCCATTTGAAC 58.288 47.619 0.00 0.00 0.00 3.18
67 68 2.039746 ACGGGTCAGATCCATTTGAACA 59.960 45.455 0.00 0.00 32.64 3.18
68 69 2.679837 CGGGTCAGATCCATTTGAACAG 59.320 50.000 0.00 0.00 32.64 3.16
69 70 2.424956 GGGTCAGATCCATTTGAACAGC 59.575 50.000 0.00 0.00 32.64 4.40
70 71 3.084039 GGTCAGATCCATTTGAACAGCA 58.916 45.455 0.00 0.00 31.35 4.41
71 72 3.119708 GGTCAGATCCATTTGAACAGCAC 60.120 47.826 0.00 0.00 31.35 4.40
72 73 3.084039 TCAGATCCATTTGAACAGCACC 58.916 45.455 0.00 0.00 0.00 5.01
73 74 2.086869 AGATCCATTTGAACAGCACCG 58.913 47.619 0.00 0.00 0.00 4.94
74 75 2.083774 GATCCATTTGAACAGCACCGA 58.916 47.619 0.00 0.00 0.00 4.69
75 76 1.234821 TCCATTTGAACAGCACCGAC 58.765 50.000 0.00 0.00 0.00 4.79
76 77 0.110238 CCATTTGAACAGCACCGACG 60.110 55.000 0.00 0.00 0.00 5.12
77 78 0.725784 CATTTGAACAGCACCGACGC 60.726 55.000 0.00 0.00 0.00 5.19
78 79 0.884704 ATTTGAACAGCACCGACGCT 60.885 50.000 0.00 0.00 45.21 5.07
79 80 0.249531 TTTGAACAGCACCGACGCTA 60.250 50.000 0.00 0.00 41.38 4.26
80 81 0.942410 TTGAACAGCACCGACGCTAC 60.942 55.000 0.00 0.00 41.38 3.58
81 82 1.372499 GAACAGCACCGACGCTACA 60.372 57.895 0.00 0.00 41.38 2.74
82 83 1.344942 GAACAGCACCGACGCTACAG 61.345 60.000 0.00 0.00 41.38 2.74
83 84 2.083835 AACAGCACCGACGCTACAGT 62.084 55.000 0.00 0.00 41.38 3.55
84 85 1.239296 ACAGCACCGACGCTACAGTA 61.239 55.000 0.00 0.00 41.38 2.74
85 86 0.109458 CAGCACCGACGCTACAGTAA 60.109 55.000 0.00 0.00 41.38 2.24
86 87 0.170561 AGCACCGACGCTACAGTAAG 59.829 55.000 0.00 0.00 41.55 2.34
87 88 0.109412 GCACCGACGCTACAGTAAGT 60.109 55.000 0.00 0.00 0.00 2.24
88 89 1.614385 CACCGACGCTACAGTAAGTG 58.386 55.000 0.00 0.00 0.00 3.16
89 90 1.198408 CACCGACGCTACAGTAAGTGA 59.802 52.381 0.00 0.00 32.25 3.41
90 91 1.881973 ACCGACGCTACAGTAAGTGAA 59.118 47.619 0.00 0.00 0.00 3.18
91 92 2.490903 ACCGACGCTACAGTAAGTGAAT 59.509 45.455 0.00 0.00 0.00 2.57
92 93 2.852413 CCGACGCTACAGTAAGTGAATG 59.148 50.000 0.00 0.00 0.00 2.67
93 94 2.852413 CGACGCTACAGTAAGTGAATGG 59.148 50.000 0.00 0.00 0.00 3.16
94 95 3.672511 CGACGCTACAGTAAGTGAATGGT 60.673 47.826 0.00 0.00 0.00 3.55
95 96 4.437794 CGACGCTACAGTAAGTGAATGGTA 60.438 45.833 0.00 0.00 0.00 3.25
96 97 4.741342 ACGCTACAGTAAGTGAATGGTAC 58.259 43.478 0.00 0.00 0.00 3.34
97 98 4.461781 ACGCTACAGTAAGTGAATGGTACT 59.538 41.667 0.00 0.00 0.00 2.73
98 99 5.047519 ACGCTACAGTAAGTGAATGGTACTT 60.048 40.000 0.00 0.00 41.06 2.24
99 100 5.288712 CGCTACAGTAAGTGAATGGTACTTG 59.711 44.000 0.00 0.00 38.70 3.16
100 101 6.164176 GCTACAGTAAGTGAATGGTACTTGT 58.836 40.000 0.00 0.00 38.70 3.16
101 102 6.090898 GCTACAGTAAGTGAATGGTACTTGTG 59.909 42.308 0.00 0.00 38.70 3.33
102 103 4.755123 ACAGTAAGTGAATGGTACTTGTGC 59.245 41.667 0.00 0.00 38.70 4.57
103 104 4.997395 CAGTAAGTGAATGGTACTTGTGCT 59.003 41.667 0.00 0.00 38.70 4.40
104 105 6.163476 CAGTAAGTGAATGGTACTTGTGCTA 58.837 40.000 0.00 0.00 38.70 3.49
105 106 6.090898 CAGTAAGTGAATGGTACTTGTGCTAC 59.909 42.308 0.00 0.00 38.70 3.58
106 107 4.617253 AGTGAATGGTACTTGTGCTACA 57.383 40.909 0.00 0.00 0.00 2.74
107 108 4.569943 AGTGAATGGTACTTGTGCTACAG 58.430 43.478 0.00 0.00 0.00 2.74
108 109 3.684788 GTGAATGGTACTTGTGCTACAGG 59.315 47.826 0.00 0.00 0.00 4.00
109 110 3.580895 TGAATGGTACTTGTGCTACAGGA 59.419 43.478 5.63 0.00 0.00 3.86
110 111 3.895232 ATGGTACTTGTGCTACAGGAG 57.105 47.619 5.63 0.00 0.00 3.69
124 125 5.514274 CTACAGGAGCTTTTTGGTTTCAA 57.486 39.130 0.00 0.00 0.00 2.69
125 126 4.391405 ACAGGAGCTTTTTGGTTTCAAG 57.609 40.909 0.00 0.00 33.98 3.02
126 127 3.769300 ACAGGAGCTTTTTGGTTTCAAGT 59.231 39.130 0.00 0.00 33.98 3.16
127 128 4.222810 ACAGGAGCTTTTTGGTTTCAAGTT 59.777 37.500 0.00 0.00 33.98 2.66
128 129 5.178061 CAGGAGCTTTTTGGTTTCAAGTTT 58.822 37.500 0.00 0.00 33.98 2.66
129 130 5.291858 CAGGAGCTTTTTGGTTTCAAGTTTC 59.708 40.000 0.00 0.00 33.98 2.78
130 131 5.187772 AGGAGCTTTTTGGTTTCAAGTTTCT 59.812 36.000 0.00 0.00 33.98 2.52
131 132 5.874810 GGAGCTTTTTGGTTTCAAGTTTCTT 59.125 36.000 0.00 0.00 33.98 2.52
132 133 6.036083 GGAGCTTTTTGGTTTCAAGTTTCTTC 59.964 38.462 0.00 0.00 33.98 2.87
133 134 6.463360 AGCTTTTTGGTTTCAAGTTTCTTCA 58.537 32.000 0.00 0.00 33.98 3.02
134 135 7.105588 AGCTTTTTGGTTTCAAGTTTCTTCAT 58.894 30.769 0.00 0.00 33.98 2.57
135 136 7.064966 AGCTTTTTGGTTTCAAGTTTCTTCATG 59.935 33.333 0.00 0.00 33.98 3.07
136 137 7.064490 GCTTTTTGGTTTCAAGTTTCTTCATGA 59.936 33.333 0.00 0.00 33.98 3.07
137 138 8.477984 TTTTTGGTTTCAAGTTTCTTCATGAG 57.522 30.769 0.00 0.00 33.98 2.90
138 139 5.772825 TGGTTTCAAGTTTCTTCATGAGG 57.227 39.130 0.00 0.00 0.00 3.86
139 140 4.037923 TGGTTTCAAGTTTCTTCATGAGGC 59.962 41.667 0.00 0.00 0.00 4.70
140 141 4.550422 GTTTCAAGTTTCTTCATGAGGCC 58.450 43.478 0.00 0.00 0.00 5.19
141 142 3.795688 TCAAGTTTCTTCATGAGGCCT 57.204 42.857 3.86 3.86 0.00 5.19
142 143 3.415212 TCAAGTTTCTTCATGAGGCCTG 58.585 45.455 12.00 0.00 0.00 4.85
143 144 2.490903 CAAGTTTCTTCATGAGGCCTGG 59.509 50.000 12.00 0.00 0.00 4.45
144 145 1.005215 AGTTTCTTCATGAGGCCTGGG 59.995 52.381 12.00 0.00 0.00 4.45
145 146 0.332632 TTTCTTCATGAGGCCTGGGG 59.667 55.000 12.00 0.00 0.00 4.96
146 147 1.574526 TTCTTCATGAGGCCTGGGGG 61.575 60.000 12.00 0.00 0.00 5.40
166 167 4.055360 GGGGAAACACCATTTTCTTTTCG 58.945 43.478 0.00 0.00 41.20 3.46
167 168 4.202172 GGGGAAACACCATTTTCTTTTCGA 60.202 41.667 0.00 0.00 41.20 3.71
168 169 4.982295 GGGAAACACCATTTTCTTTTCGAG 59.018 41.667 0.00 0.00 41.20 4.04
169 170 5.451381 GGGAAACACCATTTTCTTTTCGAGT 60.451 40.000 0.00 0.00 41.20 4.18
170 171 6.040247 GGAAACACCATTTTCTTTTCGAGTT 58.960 36.000 0.00 0.00 36.02 3.01
171 172 6.019881 GGAAACACCATTTTCTTTTCGAGTTG 60.020 38.462 0.00 0.00 36.02 3.16
172 173 5.576447 ACACCATTTTCTTTTCGAGTTGT 57.424 34.783 0.00 0.00 0.00 3.32
173 174 6.687081 ACACCATTTTCTTTTCGAGTTGTA 57.313 33.333 0.00 0.00 0.00 2.41
174 175 7.090953 ACACCATTTTCTTTTCGAGTTGTAA 57.909 32.000 0.00 0.00 0.00 2.41
175 176 7.193595 ACACCATTTTCTTTTCGAGTTGTAAG 58.806 34.615 0.00 0.00 0.00 2.34
176 177 7.148137 ACACCATTTTCTTTTCGAGTTGTAAGT 60.148 33.333 0.00 0.00 0.00 2.24
177 178 7.165812 CACCATTTTCTTTTCGAGTTGTAAGTG 59.834 37.037 0.00 0.00 0.00 3.16
178 179 6.636850 CCATTTTCTTTTCGAGTTGTAAGTGG 59.363 38.462 0.00 0.00 0.00 4.00
179 180 5.744666 TTTCTTTTCGAGTTGTAAGTGGG 57.255 39.130 0.00 0.00 0.00 4.61
180 181 3.735591 TCTTTTCGAGTTGTAAGTGGGG 58.264 45.455 0.00 0.00 0.00 4.96
181 182 3.135167 TCTTTTCGAGTTGTAAGTGGGGT 59.865 43.478 0.00 0.00 0.00 4.95
182 183 4.344679 TCTTTTCGAGTTGTAAGTGGGGTA 59.655 41.667 0.00 0.00 0.00 3.69
183 184 4.686191 TTTCGAGTTGTAAGTGGGGTAA 57.314 40.909 0.00 0.00 0.00 2.85
184 185 4.895668 TTCGAGTTGTAAGTGGGGTAAT 57.104 40.909 0.00 0.00 0.00 1.89
185 186 5.999205 TTCGAGTTGTAAGTGGGGTAATA 57.001 39.130 0.00 0.00 0.00 0.98
186 187 6.549433 TTCGAGTTGTAAGTGGGGTAATAT 57.451 37.500 0.00 0.00 0.00 1.28
187 188 6.152932 TCGAGTTGTAAGTGGGGTAATATC 57.847 41.667 0.00 0.00 0.00 1.63
188 189 5.657745 TCGAGTTGTAAGTGGGGTAATATCA 59.342 40.000 0.00 0.00 0.00 2.15
189 190 6.325545 TCGAGTTGTAAGTGGGGTAATATCAT 59.674 38.462 0.00 0.00 0.00 2.45
190 191 6.990349 CGAGTTGTAAGTGGGGTAATATCATT 59.010 38.462 0.00 0.00 0.00 2.57
191 192 7.497909 CGAGTTGTAAGTGGGGTAATATCATTT 59.502 37.037 0.00 0.00 0.00 2.32
192 193 9.185680 GAGTTGTAAGTGGGGTAATATCATTTT 57.814 33.333 0.00 0.00 0.00 1.82
193 194 9.541884 AGTTGTAAGTGGGGTAATATCATTTTT 57.458 29.630 0.00 0.00 0.00 1.94
194 195 9.797556 GTTGTAAGTGGGGTAATATCATTTTTC 57.202 33.333 0.00 0.00 0.00 2.29
195 196 9.762381 TTGTAAGTGGGGTAATATCATTTTTCT 57.238 29.630 0.00 0.00 0.00 2.52
196 197 9.762381 TGTAAGTGGGGTAATATCATTTTTCTT 57.238 29.630 0.00 0.00 0.00 2.52
199 200 8.306313 AGTGGGGTAATATCATTTTTCTTTCC 57.694 34.615 0.00 0.00 0.00 3.13
200 201 7.068226 AGTGGGGTAATATCATTTTTCTTTCCG 59.932 37.037 0.00 0.00 0.00 4.30
201 202 6.322712 TGGGGTAATATCATTTTTCTTTCCGG 59.677 38.462 0.00 0.00 0.00 5.14
202 203 6.548251 GGGGTAATATCATTTTTCTTTCCGGA 59.452 38.462 0.00 0.00 0.00 5.14
203 204 7.068962 GGGGTAATATCATTTTTCTTTCCGGAA 59.931 37.037 14.35 14.35 0.00 4.30
204 205 8.638873 GGGTAATATCATTTTTCTTTCCGGAAT 58.361 33.333 19.62 0.78 0.00 3.01
211 212 7.703328 TCATTTTTCTTTCCGGAATACTATGC 58.297 34.615 19.62 0.00 0.00 3.14
212 213 7.556275 TCATTTTTCTTTCCGGAATACTATGCT 59.444 33.333 19.62 0.00 0.00 3.79
213 214 7.696992 TTTTTCTTTCCGGAATACTATGCTT 57.303 32.000 19.62 0.00 0.00 3.91
214 215 8.795842 TTTTTCTTTCCGGAATACTATGCTTA 57.204 30.769 19.62 0.00 0.00 3.09
215 216 7.781548 TTTCTTTCCGGAATACTATGCTTAC 57.218 36.000 19.62 0.00 0.00 2.34
216 217 6.726490 TCTTTCCGGAATACTATGCTTACT 57.274 37.500 19.62 0.00 0.00 2.24
217 218 7.120923 TCTTTCCGGAATACTATGCTTACTT 57.879 36.000 19.62 0.00 0.00 2.24
218 219 7.562135 TCTTTCCGGAATACTATGCTTACTTT 58.438 34.615 19.62 0.00 0.00 2.66
219 220 8.044908 TCTTTCCGGAATACTATGCTTACTTTT 58.955 33.333 19.62 0.00 0.00 2.27
220 221 9.321562 CTTTCCGGAATACTATGCTTACTTTTA 57.678 33.333 19.62 0.00 0.00 1.52
221 222 9.669887 TTTCCGGAATACTATGCTTACTTTTAA 57.330 29.630 19.62 0.00 0.00 1.52
222 223 8.882415 TCCGGAATACTATGCTTACTTTTAAG 57.118 34.615 0.00 0.00 38.23 1.85
223 224 7.929785 TCCGGAATACTATGCTTACTTTTAAGG 59.070 37.037 0.00 0.00 36.02 2.69
275 276 0.321387 GGGAGTCCGTGGGAGAAAAC 60.321 60.000 2.26 0.00 29.39 2.43
283 284 2.625790 CCGTGGGAGAAAACCATTTGAA 59.374 45.455 0.00 0.00 40.70 2.69
287 288 4.340950 GTGGGAGAAAACCATTTGAACTCA 59.659 41.667 0.00 0.00 40.70 3.41
289 290 4.537015 GGAGAAAACCATTTGAACTCACG 58.463 43.478 0.00 0.00 0.00 4.35
316 317 7.156876 TCATACAAAATTACCAGAGCAAAGG 57.843 36.000 0.00 0.00 0.00 3.11
340 341 6.263842 GGCTGGTCATCATTTCTATCAAATGA 59.736 38.462 11.20 11.20 46.71 2.57
371 372 5.531287 GTCCAACACAAGACCCATATATTCC 59.469 44.000 0.00 0.00 0.00 3.01
382 383 4.020218 ACCCATATATTCCGATGGACACAG 60.020 45.833 4.10 0.00 44.72 3.66
384 385 5.186992 CCCATATATTCCGATGGACACAGTA 59.813 44.000 4.10 0.00 44.72 2.74
385 386 6.333416 CCATATATTCCGATGGACACAGTAG 58.667 44.000 0.00 0.00 44.72 2.57
387 388 3.802948 ATTCCGATGGACACAGTAGAC 57.197 47.619 0.00 0.00 0.00 2.59
390 391 0.525668 CGATGGACACAGTAGACGCC 60.526 60.000 0.00 0.00 0.00 5.68
393 394 0.826256 TGGACACAGTAGACGCCAGT 60.826 55.000 0.00 0.00 0.00 4.00
394 395 1.171308 GGACACAGTAGACGCCAGTA 58.829 55.000 0.00 0.00 0.00 2.74
395 396 1.135460 GGACACAGTAGACGCCAGTAC 60.135 57.143 0.00 0.00 0.00 2.73
422 423 2.033550 CGAGTACCTTGCAGGCTAGTAG 59.966 54.545 2.31 0.00 39.63 2.57
436 437 2.032722 GCTAGTAGATCGAGTCACGTGG 60.033 54.545 17.00 0.00 43.13 4.94
440 441 0.960861 AGATCGAGTCACGTGGCTCA 60.961 55.000 40.00 29.51 46.59 4.26
441 442 0.524392 GATCGAGTCACGTGGCTCAG 60.524 60.000 40.00 32.34 46.59 3.35
469 470 2.024319 GGAGCTCGTGTGCACTGTC 61.024 63.158 19.41 7.71 34.99 3.51
498 499 6.483307 CCAGTGTTGTATTGTCTCTTCAAAGA 59.517 38.462 0.00 0.00 0.00 2.52
511 512 5.784177 CTCTTCAAAGAGCTACAACCTACA 58.216 41.667 6.82 0.00 45.26 2.74
512 513 6.360370 TCTTCAAAGAGCTACAACCTACAT 57.640 37.500 0.00 0.00 0.00 2.29
513 514 6.166279 TCTTCAAAGAGCTACAACCTACATG 58.834 40.000 0.00 0.00 0.00 3.21
514 515 4.832248 TCAAAGAGCTACAACCTACATGG 58.168 43.478 0.00 0.00 42.93 3.66
515 516 4.530553 TCAAAGAGCTACAACCTACATGGA 59.469 41.667 0.00 0.00 39.71 3.41
523 524 2.002586 CAACCTACATGGAGCTGAACG 58.997 52.381 0.00 0.00 39.71 3.95
527 528 1.995484 CTACATGGAGCTGAACGTGTG 59.005 52.381 14.48 4.81 37.41 3.82
535 536 1.566563 CTGAACGTGTGTGCAGCTC 59.433 57.895 0.00 0.00 44.70 4.09
536 537 1.153469 TGAACGTGTGTGCAGCTCA 60.153 52.632 0.00 0.00 0.00 4.26
537 538 0.532640 TGAACGTGTGTGCAGCTCAT 60.533 50.000 0.00 0.00 0.00 2.90
538 539 0.588252 GAACGTGTGTGCAGCTCATT 59.412 50.000 0.00 0.00 0.00 2.57
539 540 1.798223 GAACGTGTGTGCAGCTCATTA 59.202 47.619 0.00 0.00 0.00 1.90
540 541 1.877637 ACGTGTGTGCAGCTCATTAA 58.122 45.000 0.00 0.00 0.00 1.40
541 542 2.217750 ACGTGTGTGCAGCTCATTAAA 58.782 42.857 0.00 0.00 0.00 1.52
542 543 2.032030 ACGTGTGTGCAGCTCATTAAAC 60.032 45.455 0.00 0.00 0.00 2.01
1037 1038 2.352032 CCTCACTCCGTCAGTCCCC 61.352 68.421 0.00 0.00 30.26 4.81
1060 1061 2.799126 ACACTCACACCAAAGACCAA 57.201 45.000 0.00 0.00 0.00 3.67
1061 1062 3.080300 ACACTCACACCAAAGACCAAA 57.920 42.857 0.00 0.00 0.00 3.28
1062 1063 2.752903 ACACTCACACCAAAGACCAAAC 59.247 45.455 0.00 0.00 0.00 2.93
1063 1064 2.099098 CACTCACACCAAAGACCAAACC 59.901 50.000 0.00 0.00 0.00 3.27
1064 1065 1.681264 CTCACACCAAAGACCAAACCC 59.319 52.381 0.00 0.00 0.00 4.11
1065 1066 1.006043 TCACACCAAAGACCAAACCCA 59.994 47.619 0.00 0.00 0.00 4.51
1066 1067 1.408702 CACACCAAAGACCAAACCCAG 59.591 52.381 0.00 0.00 0.00 4.45
1067 1068 1.006639 ACACCAAAGACCAAACCCAGT 59.993 47.619 0.00 0.00 0.00 4.00
1068 1069 2.107366 CACCAAAGACCAAACCCAGTT 58.893 47.619 0.00 0.00 0.00 3.16
1069 1070 3.292460 CACCAAAGACCAAACCCAGTTA 58.708 45.455 0.00 0.00 0.00 2.24
1070 1071 3.067601 CACCAAAGACCAAACCCAGTTAC 59.932 47.826 0.00 0.00 0.00 2.50
1071 1072 2.626266 CCAAAGACCAAACCCAGTTACC 59.374 50.000 0.00 0.00 0.00 2.85
1072 1073 3.292460 CAAAGACCAAACCCAGTTACCA 58.708 45.455 0.00 0.00 0.00 3.25
1073 1074 2.651382 AGACCAAACCCAGTTACCAC 57.349 50.000 0.00 0.00 0.00 4.16
1074 1075 1.847737 AGACCAAACCCAGTTACCACA 59.152 47.619 0.00 0.00 0.00 4.17
1075 1076 2.445525 AGACCAAACCCAGTTACCACAT 59.554 45.455 0.00 0.00 0.00 3.21
1076 1077 2.556622 GACCAAACCCAGTTACCACATG 59.443 50.000 0.00 0.00 0.00 3.21
1077 1078 2.175931 ACCAAACCCAGTTACCACATGA 59.824 45.455 0.00 0.00 0.00 3.07
1078 1079 2.556622 CCAAACCCAGTTACCACATGAC 59.443 50.000 0.00 0.00 0.00 3.06
1079 1080 3.218453 CAAACCCAGTTACCACATGACA 58.782 45.455 0.00 0.00 0.00 3.58
1080 1081 3.806949 AACCCAGTTACCACATGACAT 57.193 42.857 0.00 0.00 0.00 3.06
1081 1082 3.071874 ACCCAGTTACCACATGACATG 57.928 47.619 14.02 14.02 0.00 3.21
1082 1083 2.375174 ACCCAGTTACCACATGACATGT 59.625 45.455 15.48 15.48 46.22 3.21
1092 1093 3.423539 ACATGACATGTGTGGTTAGCT 57.576 42.857 20.21 0.00 43.01 3.32
1093 1094 4.551702 ACATGACATGTGTGGTTAGCTA 57.448 40.909 20.21 0.00 43.01 3.32
1094 1095 5.102953 ACATGACATGTGTGGTTAGCTAT 57.897 39.130 20.21 0.00 43.01 2.97
1095 1096 5.118990 ACATGACATGTGTGGTTAGCTATC 58.881 41.667 20.21 0.00 43.01 2.08
1096 1097 5.104776 ACATGACATGTGTGGTTAGCTATCT 60.105 40.000 20.21 0.00 43.01 1.98
1097 1098 5.420725 TGACATGTGTGGTTAGCTATCTT 57.579 39.130 1.15 0.00 0.00 2.40
1098 1099 6.538945 TGACATGTGTGGTTAGCTATCTTA 57.461 37.500 1.15 0.00 0.00 2.10
1099 1100 6.338146 TGACATGTGTGGTTAGCTATCTTAC 58.662 40.000 1.15 0.00 0.00 2.34
1100 1101 5.348986 ACATGTGTGGTTAGCTATCTTACG 58.651 41.667 0.00 0.00 0.00 3.18
1101 1102 3.777478 TGTGTGGTTAGCTATCTTACGC 58.223 45.455 0.00 5.50 0.00 4.42
1102 1103 3.446161 TGTGTGGTTAGCTATCTTACGCT 59.554 43.478 16.64 0.00 40.15 5.07
1103 1104 4.641541 TGTGTGGTTAGCTATCTTACGCTA 59.358 41.667 16.64 0.00 37.68 4.26
1104 1105 5.125900 TGTGTGGTTAGCTATCTTACGCTAA 59.874 40.000 16.64 0.00 44.03 3.09
1105 1106 5.686397 GTGTGGTTAGCTATCTTACGCTAAG 59.314 44.000 4.17 0.00 46.03 2.18
1106 1107 5.359009 TGTGGTTAGCTATCTTACGCTAAGT 59.641 40.000 4.17 0.00 46.03 2.24
1107 1108 6.127535 TGTGGTTAGCTATCTTACGCTAAGTT 60.128 38.462 4.17 0.00 46.03 2.66
1108 1109 6.198591 GTGGTTAGCTATCTTACGCTAAGTTG 59.801 42.308 4.17 0.63 46.03 3.16
1109 1110 6.095860 TGGTTAGCTATCTTACGCTAAGTTGA 59.904 38.462 4.17 0.00 46.03 3.18
1110 1111 6.637658 GGTTAGCTATCTTACGCTAAGTTGAG 59.362 42.308 4.17 3.59 46.03 3.02
1111 1112 7.416022 GTTAGCTATCTTACGCTAAGTTGAGA 58.584 38.462 4.17 0.00 46.03 3.27
1112 1113 5.823353 AGCTATCTTACGCTAAGTTGAGAC 58.177 41.667 0.00 0.00 37.10 3.36
1113 1114 5.357314 AGCTATCTTACGCTAAGTTGAGACA 59.643 40.000 0.00 0.00 37.10 3.41
1114 1115 6.034591 GCTATCTTACGCTAAGTTGAGACAA 58.965 40.000 5.18 0.00 37.10 3.18
1115 1116 6.197468 GCTATCTTACGCTAAGTTGAGACAAG 59.803 42.308 5.18 0.00 37.10 3.16
1116 1117 5.449107 TCTTACGCTAAGTTGAGACAAGT 57.551 39.130 5.18 0.00 37.10 3.16
1117 1118 6.564709 TCTTACGCTAAGTTGAGACAAGTA 57.435 37.500 0.00 0.00 37.10 2.24
1118 1119 7.154435 TCTTACGCTAAGTTGAGACAAGTAT 57.846 36.000 0.00 0.00 37.10 2.12
1119 1120 7.600065 TCTTACGCTAAGTTGAGACAAGTATT 58.400 34.615 0.00 0.00 37.10 1.89
1120 1121 8.086522 TCTTACGCTAAGTTGAGACAAGTATTT 58.913 33.333 0.00 0.00 37.10 1.40
1121 1122 6.467723 ACGCTAAGTTGAGACAAGTATTTG 57.532 37.500 0.00 0.00 40.24 2.32
1136 1137 8.519799 ACAAGTATTTGTGGAAGAAGAAGAAA 57.480 30.769 2.38 0.00 45.54 2.52
1137 1138 8.624776 ACAAGTATTTGTGGAAGAAGAAGAAAG 58.375 33.333 2.38 0.00 45.54 2.62
1138 1139 8.840321 CAAGTATTTGTGGAAGAAGAAGAAAGA 58.160 33.333 0.00 0.00 0.00 2.52
1139 1140 8.980481 AGTATTTGTGGAAGAAGAAGAAAGAA 57.020 30.769 0.00 0.00 0.00 2.52
1140 1141 8.841300 AGTATTTGTGGAAGAAGAAGAAAGAAC 58.159 33.333 0.00 0.00 0.00 3.01
1141 1142 5.734855 TTGTGGAAGAAGAAGAAAGAACG 57.265 39.130 0.00 0.00 0.00 3.95
1142 1143 4.127171 TGTGGAAGAAGAAGAAAGAACGG 58.873 43.478 0.00 0.00 0.00 4.44
1143 1144 3.498777 GTGGAAGAAGAAGAAAGAACGGG 59.501 47.826 0.00 0.00 0.00 5.28
1144 1145 3.389983 TGGAAGAAGAAGAAAGAACGGGA 59.610 43.478 0.00 0.00 0.00 5.14
1145 1146 4.141574 TGGAAGAAGAAGAAAGAACGGGAA 60.142 41.667 0.00 0.00 0.00 3.97
1146 1147 4.820173 GGAAGAAGAAGAAAGAACGGGAAA 59.180 41.667 0.00 0.00 0.00 3.13
1147 1148 5.049336 GGAAGAAGAAGAAAGAACGGGAAAG 60.049 44.000 0.00 0.00 0.00 2.62
1148 1149 5.291905 AGAAGAAGAAAGAACGGGAAAGA 57.708 39.130 0.00 0.00 0.00 2.52
1149 1150 5.057819 AGAAGAAGAAAGAACGGGAAAGAC 58.942 41.667 0.00 0.00 0.00 3.01
1150 1151 3.741249 AGAAGAAAGAACGGGAAAGACC 58.259 45.455 0.00 0.00 38.08 3.85
1151 1152 3.135895 AGAAGAAAGAACGGGAAAGACCA 59.864 43.478 0.00 0.00 41.20 4.02
1152 1153 3.570912 AGAAAGAACGGGAAAGACCAA 57.429 42.857 0.00 0.00 41.20 3.67
1153 1154 3.893521 AGAAAGAACGGGAAAGACCAAA 58.106 40.909 0.00 0.00 41.20 3.28
1157 1158 0.259356 AACGGGAAAGACCAAACCCA 59.741 50.000 0.00 0.00 42.16 4.51
1160 1161 1.617322 GGGAAAGACCAAACCCAGTC 58.383 55.000 0.00 0.00 41.72 3.51
1162 1163 1.476291 GGAAAGACCAAACCCAGTCGT 60.476 52.381 0.00 0.00 38.08 4.34
1170 1171 2.095978 AAACCCAGTCGTCGTCCCTG 62.096 60.000 0.00 0.00 0.00 4.45
1174 1175 2.282251 AGTCGTCGTCCCTGAGCA 60.282 61.111 0.00 0.00 0.00 4.26
1187 1188 1.198637 CCTGAGCAAAGAAAGAAGCGG 59.801 52.381 0.00 0.00 0.00 5.52
1348 1349 2.391469 CTCATCAAGCAGAAGGCCG 58.609 57.895 0.00 0.00 46.50 6.13
1629 1630 1.832608 CGAGGATGATCCCCGGACA 60.833 63.158 7.57 0.00 37.19 4.02
1632 1633 2.472029 GAGGATGATCCCCGGACATAT 58.528 52.381 8.08 0.00 37.19 1.78
1688 1689 3.668447 ACTAGTGACTCGTCTTCGGTAA 58.332 45.455 0.00 0.00 37.69 2.85
1692 1693 3.317430 AGTGACTCGTCTTCGGTAAGTTT 59.683 43.478 0.00 0.00 37.69 2.66
1703 1704 2.884012 TCGGTAAGTTTCACCTCACGTA 59.116 45.455 0.00 0.00 33.62 3.57
1704 1705 2.982470 CGGTAAGTTTCACCTCACGTAC 59.018 50.000 0.00 0.00 33.62 3.67
1705 1706 2.982470 GGTAAGTTTCACCTCACGTACG 59.018 50.000 15.01 15.01 31.01 3.67
1706 1707 2.877043 AAGTTTCACCTCACGTACGT 57.123 45.000 16.72 16.72 0.00 3.57
1707 1708 3.988379 AAGTTTCACCTCACGTACGTA 57.012 42.857 22.34 8.85 0.00 3.57
1708 1709 3.273919 AGTTTCACCTCACGTACGTAC 57.726 47.619 22.34 15.90 0.00 3.67
1740 1741 6.575267 ACATGTGTACTTGTATTGGCGTATA 58.425 36.000 0.00 0.00 33.24 1.47
1742 1743 8.361889 ACATGTGTACTTGTATTGGCGTATATA 58.638 33.333 0.00 0.00 33.24 0.86
1743 1744 9.366216 CATGTGTACTTGTATTGGCGTATATAT 57.634 33.333 0.00 0.00 0.00 0.86
1769 1770 4.876125 TGTATTTGTGTCCGTACGGTTTA 58.124 39.130 32.16 17.44 36.47 2.01
1774 1775 0.961019 TGTCCGTACGGTTTAGTGCT 59.039 50.000 32.16 0.00 36.47 4.40
1781 1782 3.241868 CGTACGGTTTAGTGCTATTGTGC 60.242 47.826 7.57 0.00 0.00 4.57
1785 1786 2.486592 GGTTTAGTGCTATTGTGCGGTT 59.513 45.455 0.00 0.00 35.36 4.44
1789 1790 5.478233 TTAGTGCTATTGTGCGGTTATTG 57.522 39.130 0.00 0.00 35.36 1.90
1802 1803 2.861935 CGGTTATTGGGTGACGTGTATC 59.138 50.000 0.00 0.00 0.00 2.24
1803 1804 3.676598 CGGTTATTGGGTGACGTGTATCA 60.677 47.826 0.00 0.00 0.00 2.15
1804 1805 3.869246 GGTTATTGGGTGACGTGTATCAG 59.131 47.826 0.00 0.00 0.00 2.90
1811 1812 3.118884 GGGTGACGTGTATCAGGTGTTAT 60.119 47.826 0.00 0.00 32.46 1.89
1812 1813 4.098349 GGGTGACGTGTATCAGGTGTTATA 59.902 45.833 0.00 0.00 32.46 0.98
1813 1814 5.221382 GGGTGACGTGTATCAGGTGTTATAT 60.221 44.000 0.00 0.00 32.46 0.86
1814 1815 6.278363 GGTGACGTGTATCAGGTGTTATATT 58.722 40.000 0.00 0.00 32.46 1.28
1815 1816 7.428020 GGTGACGTGTATCAGGTGTTATATTA 58.572 38.462 0.00 0.00 32.46 0.98
1816 1817 7.380602 GGTGACGTGTATCAGGTGTTATATTAC 59.619 40.741 0.00 0.00 32.46 1.89
1817 1818 8.133627 GTGACGTGTATCAGGTGTTATATTACT 58.866 37.037 0.00 0.00 32.46 2.24
1818 1819 8.132995 TGACGTGTATCAGGTGTTATATTACTG 58.867 37.037 0.00 0.00 32.46 2.74
1819 1820 8.004087 ACGTGTATCAGGTGTTATATTACTGT 57.996 34.615 0.00 0.00 31.07 3.55
1820 1821 8.133627 ACGTGTATCAGGTGTTATATTACTGTC 58.866 37.037 0.00 0.00 31.07 3.51
1821 1822 8.350722 CGTGTATCAGGTGTTATATTACTGTCT 58.649 37.037 0.00 0.00 0.00 3.41
1861 1862 6.622896 GCGTATGCAAGGTTAAGAATGTTCTT 60.623 38.462 12.20 12.20 44.58 2.52
1889 1891 8.630037 AGGTTCGCTAAATATAAATTTGGAAGG 58.370 33.333 0.00 0.00 36.05 3.46
1899 1901 4.751767 AAATTTGGAAGGTTGCTTGTGA 57.248 36.364 0.00 0.00 0.00 3.58
1935 1937 4.638421 CCAACGGCCTGTTTTTATCTATCA 59.362 41.667 9.78 0.00 39.29 2.15
1936 1938 5.124776 CCAACGGCCTGTTTTTATCTATCAA 59.875 40.000 9.78 0.00 39.29 2.57
1937 1939 6.258160 CAACGGCCTGTTTTTATCTATCAAG 58.742 40.000 9.78 0.00 39.29 3.02
1938 1940 5.497474 ACGGCCTGTTTTTATCTATCAAGT 58.503 37.500 0.00 0.00 0.00 3.16
1939 1941 6.646267 ACGGCCTGTTTTTATCTATCAAGTA 58.354 36.000 0.00 0.00 0.00 2.24
1940 1942 7.107542 ACGGCCTGTTTTTATCTATCAAGTAA 58.892 34.615 0.00 0.00 0.00 2.24
1941 1943 7.608761 ACGGCCTGTTTTTATCTATCAAGTAAA 59.391 33.333 0.00 0.00 0.00 2.01
1942 1944 7.908601 CGGCCTGTTTTTATCTATCAAGTAAAC 59.091 37.037 0.00 0.00 0.00 2.01
1943 1945 7.908601 GGCCTGTTTTTATCTATCAAGTAAACG 59.091 37.037 0.00 0.00 0.00 3.60
1944 1946 8.448615 GCCTGTTTTTATCTATCAAGTAAACGT 58.551 33.333 0.00 0.00 0.00 3.99
1945 1947 9.968743 CCTGTTTTTATCTATCAAGTAAACGTC 57.031 33.333 0.00 0.00 0.00 4.34
1992 2000 1.365633 CTGATGCTCCGGCTCCTAC 59.634 63.158 0.00 0.00 39.59 3.18
2028 2036 4.763073 TCTGAGATGCTTTGACGATTGAT 58.237 39.130 0.00 0.00 0.00 2.57
2040 2048 7.439157 TTTGACGATTGATTGTTCTCATCTT 57.561 32.000 0.00 0.00 0.00 2.40
2041 2049 8.546597 TTTGACGATTGATTGTTCTCATCTTA 57.453 30.769 0.00 0.00 0.00 2.10
2064 2072 0.249955 TGCCTGCGATGTTGATGAGA 59.750 50.000 0.00 0.00 0.00 3.27
2159 2168 0.442310 CGGAATACAAGCCACACACG 59.558 55.000 0.00 0.00 0.00 4.49
2197 2208 3.169355 ACAGCTGCCAAAGAACAAAAG 57.831 42.857 15.27 0.00 0.00 2.27
2271 2283 2.373540 GTGCCATCAACATTGCACAT 57.626 45.000 8.46 0.00 46.42 3.21
2278 2290 1.132834 TCAACATTGCACATCATCGCC 59.867 47.619 0.00 0.00 0.00 5.54
2285 2297 0.804364 GCACATCATCGCCAGAAACA 59.196 50.000 0.00 0.00 0.00 2.83
2303 2315 4.600692 AACAAAAAGAGTACCATTGCCC 57.399 40.909 0.00 0.00 0.00 5.36
2310 2322 0.402504 AGTACCATTGCCCAAACGGA 59.597 50.000 6.79 0.00 0.00 4.69
2368 2380 0.745128 TCGTTGTGGTGTGTTGACCC 60.745 55.000 0.00 0.00 34.79 4.46
2369 2381 1.027255 CGTTGTGGTGTGTTGACCCA 61.027 55.000 0.00 0.00 34.79 4.51
2415 2434 3.517602 CCAGATCCGTTGATTGTCGTTA 58.482 45.455 0.00 0.00 0.00 3.18
2476 2495 3.119137 GCCACACCCCTTGATATTGAAAC 60.119 47.826 0.00 0.00 0.00 2.78
2489 2508 0.393808 TTGAAACGCTAGCATCCCCC 60.394 55.000 16.45 0.00 0.00 5.40
2549 2568 6.747280 CGATTGATTCACTTGTGTAAAATCCC 59.253 38.462 9.59 2.30 0.00 3.85
2554 2573 2.227865 CACTTGTGTAAAATCCCCACGG 59.772 50.000 0.00 0.00 31.75 4.94
2583 2602 2.438021 AGTTGTGCTAGAGGAAACACCA 59.562 45.455 0.00 0.00 42.04 4.17
2586 2605 0.320374 TGCTAGAGGAAACACCACCG 59.680 55.000 0.00 0.00 42.04 4.94
2640 2684 1.271379 CCGACCCAAAACACTGATCCT 60.271 52.381 0.00 0.00 0.00 3.24
2701 2745 4.202245 TCCTTTTAGGAGACAATGTCCG 57.798 45.455 10.12 0.00 40.06 4.79
2775 2819 7.956315 AGAACACATATATAGTGGGGTGTCTAT 59.044 37.037 15.29 0.00 41.21 1.98
2784 2828 3.463329 AGTGGGGTGTCTATTATTGCCAT 59.537 43.478 0.00 0.00 0.00 4.40
2824 2868 3.274095 TGTTGTTGTCCTGATGTCACA 57.726 42.857 0.00 0.00 0.00 3.58
2870 2915 1.069973 GGCCGCAAAAGCAAATCAAAC 60.070 47.619 0.00 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.954904 AGAGAGGCATGTTACGATACTGT 59.045 43.478 0.00 0.00 0.00 3.55
1 2 4.576216 AGAGAGGCATGTTACGATACTG 57.424 45.455 0.00 0.00 0.00 2.74
2 3 5.599999 AAAGAGAGGCATGTTACGATACT 57.400 39.130 0.00 0.00 0.00 2.12
3 4 6.074249 GCTAAAAGAGAGGCATGTTACGATAC 60.074 42.308 0.00 0.00 0.00 2.24
4 5 5.983720 GCTAAAAGAGAGGCATGTTACGATA 59.016 40.000 0.00 0.00 0.00 2.92
5 6 4.811557 GCTAAAAGAGAGGCATGTTACGAT 59.188 41.667 0.00 0.00 0.00 3.73
6 7 4.181578 GCTAAAAGAGAGGCATGTTACGA 58.818 43.478 0.00 0.00 0.00 3.43
7 8 3.309954 GGCTAAAAGAGAGGCATGTTACG 59.690 47.826 0.00 0.00 39.24 3.18
8 9 4.261801 TGGCTAAAAGAGAGGCATGTTAC 58.738 43.478 0.00 0.00 43.87 2.50
9 10 4.568072 TGGCTAAAAGAGAGGCATGTTA 57.432 40.909 0.00 0.00 43.87 2.41
10 11 3.439857 TGGCTAAAAGAGAGGCATGTT 57.560 42.857 0.00 0.00 43.87 2.71
15 16 1.139058 TCGGATGGCTAAAAGAGAGGC 59.861 52.381 0.00 0.00 39.84 4.70
16 17 2.432510 AGTCGGATGGCTAAAAGAGAGG 59.567 50.000 0.00 0.00 0.00 3.69
17 18 3.131223 TCAGTCGGATGGCTAAAAGAGAG 59.869 47.826 0.00 0.00 0.00 3.20
18 19 3.096852 TCAGTCGGATGGCTAAAAGAGA 58.903 45.455 0.00 0.00 0.00 3.10
19 20 3.526931 TCAGTCGGATGGCTAAAAGAG 57.473 47.619 0.00 0.00 0.00 2.85
20 21 3.513912 TCTTCAGTCGGATGGCTAAAAGA 59.486 43.478 0.00 0.00 0.00 2.52
21 22 3.861840 TCTTCAGTCGGATGGCTAAAAG 58.138 45.455 0.00 0.00 0.00 2.27
22 23 3.973206 TCTTCAGTCGGATGGCTAAAA 57.027 42.857 0.00 0.00 0.00 1.52
23 24 3.450817 TGATCTTCAGTCGGATGGCTAAA 59.549 43.478 0.00 0.00 0.00 1.85
24 25 3.031013 TGATCTTCAGTCGGATGGCTAA 58.969 45.455 0.00 0.00 0.00 3.09
25 26 2.666317 TGATCTTCAGTCGGATGGCTA 58.334 47.619 0.00 0.00 0.00 3.93
26 27 1.489481 TGATCTTCAGTCGGATGGCT 58.511 50.000 0.00 0.00 0.00 4.75
27 28 1.936547 GTTGATCTTCAGTCGGATGGC 59.063 52.381 0.00 0.00 0.00 4.40
28 29 2.196749 CGTTGATCTTCAGTCGGATGG 58.803 52.381 0.00 0.00 0.00 3.51
29 30 2.196749 CCGTTGATCTTCAGTCGGATG 58.803 52.381 13.85 0.00 43.18 3.51
30 31 1.137086 CCCGTTGATCTTCAGTCGGAT 59.863 52.381 18.03 0.00 43.18 4.18
31 32 0.530744 CCCGTTGATCTTCAGTCGGA 59.469 55.000 18.03 0.00 43.18 4.55
32 33 0.246635 ACCCGTTGATCTTCAGTCGG 59.753 55.000 12.78 12.78 41.60 4.79
33 34 1.067846 TGACCCGTTGATCTTCAGTCG 60.068 52.381 0.00 0.00 0.00 4.18
34 35 2.231478 TCTGACCCGTTGATCTTCAGTC 59.769 50.000 0.00 0.00 36.03 3.51
35 36 2.248248 TCTGACCCGTTGATCTTCAGT 58.752 47.619 0.00 0.00 36.03 3.41
36 37 3.452474 GATCTGACCCGTTGATCTTCAG 58.548 50.000 0.00 0.00 35.16 3.02
37 38 2.168521 GGATCTGACCCGTTGATCTTCA 59.831 50.000 0.00 0.00 37.38 3.02
38 39 2.168521 TGGATCTGACCCGTTGATCTTC 59.831 50.000 0.00 0.00 37.38 2.87
39 40 2.187958 TGGATCTGACCCGTTGATCTT 58.812 47.619 0.00 0.00 37.38 2.40
40 41 1.866015 TGGATCTGACCCGTTGATCT 58.134 50.000 0.00 0.00 37.38 2.75
41 42 2.918712 ATGGATCTGACCCGTTGATC 57.081 50.000 0.00 0.00 36.72 2.92
42 43 3.054434 TCAAATGGATCTGACCCGTTGAT 60.054 43.478 0.00 0.00 33.48 2.57
43 44 2.304470 TCAAATGGATCTGACCCGTTGA 59.696 45.455 0.00 0.00 33.48 3.18
44 45 2.710377 TCAAATGGATCTGACCCGTTG 58.290 47.619 0.00 0.00 33.48 4.10
45 46 3.081804 GTTCAAATGGATCTGACCCGTT 58.918 45.455 0.00 0.00 34.56 4.44
46 47 2.039746 TGTTCAAATGGATCTGACCCGT 59.960 45.455 0.00 0.00 0.00 5.28
47 48 2.679837 CTGTTCAAATGGATCTGACCCG 59.320 50.000 0.00 0.00 0.00 5.28
48 49 2.424956 GCTGTTCAAATGGATCTGACCC 59.575 50.000 0.00 0.00 0.00 4.46
49 50 3.084039 TGCTGTTCAAATGGATCTGACC 58.916 45.455 0.00 0.00 0.00 4.02
50 51 3.119708 GGTGCTGTTCAAATGGATCTGAC 60.120 47.826 0.00 0.00 0.00 3.51
51 52 3.084039 GGTGCTGTTCAAATGGATCTGA 58.916 45.455 0.00 0.00 0.00 3.27
52 53 2.159476 CGGTGCTGTTCAAATGGATCTG 60.159 50.000 0.00 0.00 0.00 2.90
53 54 2.086869 CGGTGCTGTTCAAATGGATCT 58.913 47.619 0.00 0.00 0.00 2.75
54 55 2.083774 TCGGTGCTGTTCAAATGGATC 58.916 47.619 0.00 0.00 0.00 3.36
55 56 1.812571 GTCGGTGCTGTTCAAATGGAT 59.187 47.619 0.00 0.00 0.00 3.41
56 57 1.234821 GTCGGTGCTGTTCAAATGGA 58.765 50.000 0.00 0.00 0.00 3.41
57 58 0.110238 CGTCGGTGCTGTTCAAATGG 60.110 55.000 0.00 0.00 0.00 3.16
58 59 0.725784 GCGTCGGTGCTGTTCAAATG 60.726 55.000 0.00 0.00 0.00 2.32
59 60 0.884704 AGCGTCGGTGCTGTTCAAAT 60.885 50.000 0.00 0.00 45.28 2.32
60 61 0.249531 TAGCGTCGGTGCTGTTCAAA 60.250 50.000 7.30 0.00 46.70 2.69
61 62 0.942410 GTAGCGTCGGTGCTGTTCAA 60.942 55.000 7.30 0.00 46.70 2.69
62 63 1.372499 GTAGCGTCGGTGCTGTTCA 60.372 57.895 7.30 0.00 46.70 3.18
63 64 1.344942 CTGTAGCGTCGGTGCTGTTC 61.345 60.000 13.55 4.31 46.70 3.18
64 65 1.372997 CTGTAGCGTCGGTGCTGTT 60.373 57.895 13.55 0.00 46.70 3.16
65 66 1.239296 TACTGTAGCGTCGGTGCTGT 61.239 55.000 23.38 23.38 46.70 4.40
66 67 0.109458 TTACTGTAGCGTCGGTGCTG 60.109 55.000 15.61 15.61 46.70 4.41
68 69 0.109412 ACTTACTGTAGCGTCGGTGC 60.109 55.000 7.30 6.36 0.00 5.01
69 70 1.198408 TCACTTACTGTAGCGTCGGTG 59.802 52.381 7.30 0.00 0.00 4.94
70 71 1.527034 TCACTTACTGTAGCGTCGGT 58.473 50.000 1.19 1.19 0.00 4.69
71 72 2.624316 TTCACTTACTGTAGCGTCGG 57.376 50.000 0.00 0.00 0.00 4.79
72 73 2.852413 CCATTCACTTACTGTAGCGTCG 59.148 50.000 0.00 0.00 0.00 5.12
73 74 3.846360 ACCATTCACTTACTGTAGCGTC 58.154 45.455 0.00 0.00 0.00 5.19
74 75 3.955650 ACCATTCACTTACTGTAGCGT 57.044 42.857 0.00 0.00 0.00 5.07
75 76 4.995124 AGTACCATTCACTTACTGTAGCG 58.005 43.478 0.00 0.00 0.00 4.26
76 77 6.090898 CACAAGTACCATTCACTTACTGTAGC 59.909 42.308 0.00 0.00 34.50 3.58
77 78 6.090898 GCACAAGTACCATTCACTTACTGTAG 59.909 42.308 0.00 0.00 34.50 2.74
78 79 5.929992 GCACAAGTACCATTCACTTACTGTA 59.070 40.000 0.00 0.00 34.50 2.74
79 80 4.755123 GCACAAGTACCATTCACTTACTGT 59.245 41.667 0.00 0.00 34.50 3.55
80 81 4.997395 AGCACAAGTACCATTCACTTACTG 59.003 41.667 0.00 0.00 34.50 2.74
81 82 5.228945 AGCACAAGTACCATTCACTTACT 57.771 39.130 0.00 0.00 34.50 2.24
82 83 5.929992 TGTAGCACAAGTACCATTCACTTAC 59.070 40.000 0.00 0.00 34.50 2.34
83 84 6.104146 TGTAGCACAAGTACCATTCACTTA 57.896 37.500 0.00 0.00 34.50 2.24
84 85 4.968259 TGTAGCACAAGTACCATTCACTT 58.032 39.130 0.00 0.00 36.68 3.16
85 86 4.563580 CCTGTAGCACAAGTACCATTCACT 60.564 45.833 0.00 0.00 0.00 3.41
86 87 3.684788 CCTGTAGCACAAGTACCATTCAC 59.315 47.826 0.00 0.00 0.00 3.18
87 88 3.580895 TCCTGTAGCACAAGTACCATTCA 59.419 43.478 0.00 0.00 0.00 2.57
88 89 4.184629 CTCCTGTAGCACAAGTACCATTC 58.815 47.826 0.00 0.00 0.00 2.67
89 90 4.207891 CTCCTGTAGCACAAGTACCATT 57.792 45.455 0.00 0.00 0.00 3.16
90 91 3.895232 CTCCTGTAGCACAAGTACCAT 57.105 47.619 0.00 0.00 0.00 3.55
102 103 5.067805 ACTTGAAACCAAAAAGCTCCTGTAG 59.932 40.000 0.00 0.00 0.00 2.74
103 104 4.953579 ACTTGAAACCAAAAAGCTCCTGTA 59.046 37.500 0.00 0.00 0.00 2.74
104 105 3.769300 ACTTGAAACCAAAAAGCTCCTGT 59.231 39.130 0.00 0.00 0.00 4.00
105 106 4.391405 ACTTGAAACCAAAAAGCTCCTG 57.609 40.909 0.00 0.00 0.00 3.86
106 107 5.187772 AGAAACTTGAAACCAAAAAGCTCCT 59.812 36.000 0.00 0.00 0.00 3.69
107 108 5.419542 AGAAACTTGAAACCAAAAAGCTCC 58.580 37.500 0.00 0.00 0.00 4.70
108 109 6.589907 TGAAGAAACTTGAAACCAAAAAGCTC 59.410 34.615 0.00 0.00 0.00 4.09
109 110 6.463360 TGAAGAAACTTGAAACCAAAAAGCT 58.537 32.000 0.00 0.00 0.00 3.74
110 111 6.720012 TGAAGAAACTTGAAACCAAAAAGC 57.280 33.333 0.00 0.00 0.00 3.51
111 112 8.477984 TCATGAAGAAACTTGAAACCAAAAAG 57.522 30.769 0.00 0.00 0.00 2.27
112 113 7.548780 CCTCATGAAGAAACTTGAAACCAAAAA 59.451 33.333 0.00 0.00 0.00 1.94
113 114 7.041107 CCTCATGAAGAAACTTGAAACCAAAA 58.959 34.615 0.00 0.00 0.00 2.44
114 115 6.572519 CCTCATGAAGAAACTTGAAACCAAA 58.427 36.000 0.00 0.00 0.00 3.28
115 116 5.451798 GCCTCATGAAGAAACTTGAAACCAA 60.452 40.000 0.00 0.00 0.00 3.67
116 117 4.037923 GCCTCATGAAGAAACTTGAAACCA 59.962 41.667 0.00 0.00 0.00 3.67
117 118 4.550422 GCCTCATGAAGAAACTTGAAACC 58.450 43.478 0.00 0.00 0.00 3.27
118 119 4.279420 AGGCCTCATGAAGAAACTTGAAAC 59.721 41.667 0.00 0.00 0.00 2.78
119 120 4.279169 CAGGCCTCATGAAGAAACTTGAAA 59.721 41.667 0.00 0.00 0.00 2.69
120 121 3.822735 CAGGCCTCATGAAGAAACTTGAA 59.177 43.478 0.00 0.00 0.00 2.69
121 122 3.415212 CAGGCCTCATGAAGAAACTTGA 58.585 45.455 0.00 0.00 0.00 3.02
122 123 2.490903 CCAGGCCTCATGAAGAAACTTG 59.509 50.000 0.00 0.00 0.00 3.16
123 124 2.556114 CCCAGGCCTCATGAAGAAACTT 60.556 50.000 0.00 0.00 0.00 2.66
124 125 1.005215 CCCAGGCCTCATGAAGAAACT 59.995 52.381 0.00 0.00 0.00 2.66
125 126 1.467920 CCCAGGCCTCATGAAGAAAC 58.532 55.000 0.00 0.00 0.00 2.78
126 127 0.332632 CCCCAGGCCTCATGAAGAAA 59.667 55.000 0.00 0.00 0.00 2.52
127 128 1.574526 CCCCCAGGCCTCATGAAGAA 61.575 60.000 0.00 0.00 0.00 2.52
128 129 2.002977 CCCCCAGGCCTCATGAAGA 61.003 63.158 0.00 0.00 0.00 2.87
129 130 2.599597 CCCCCAGGCCTCATGAAG 59.400 66.667 0.00 0.00 0.00 3.02
143 144 4.385825 GAAAAGAAAATGGTGTTTCCCCC 58.614 43.478 0.00 0.00 38.10 5.40
144 145 4.055360 CGAAAAGAAAATGGTGTTTCCCC 58.945 43.478 0.00 0.00 38.10 4.81
145 146 4.939271 TCGAAAAGAAAATGGTGTTTCCC 58.061 39.130 0.00 0.00 38.10 3.97
146 147 5.588240 ACTCGAAAAGAAAATGGTGTTTCC 58.412 37.500 0.00 0.00 38.10 3.13
147 148 6.530181 ACAACTCGAAAAGAAAATGGTGTTTC 59.470 34.615 0.00 0.00 37.70 2.78
148 149 6.394809 ACAACTCGAAAAGAAAATGGTGTTT 58.605 32.000 0.00 0.00 0.00 2.83
149 150 5.961272 ACAACTCGAAAAGAAAATGGTGTT 58.039 33.333 0.00 0.00 0.00 3.32
150 151 5.576447 ACAACTCGAAAAGAAAATGGTGT 57.424 34.783 0.00 0.00 0.00 4.16
151 152 7.165812 CACTTACAACTCGAAAAGAAAATGGTG 59.834 37.037 0.00 0.00 0.00 4.17
152 153 7.193595 CACTTACAACTCGAAAAGAAAATGGT 58.806 34.615 0.00 0.00 0.00 3.55
153 154 6.636850 CCACTTACAACTCGAAAAGAAAATGG 59.363 38.462 0.00 0.00 0.00 3.16
154 155 6.636850 CCCACTTACAACTCGAAAAGAAAATG 59.363 38.462 0.00 0.00 0.00 2.32
155 156 6.238925 CCCCACTTACAACTCGAAAAGAAAAT 60.239 38.462 0.00 0.00 0.00 1.82
156 157 5.066764 CCCCACTTACAACTCGAAAAGAAAA 59.933 40.000 0.00 0.00 0.00 2.29
157 158 4.577283 CCCCACTTACAACTCGAAAAGAAA 59.423 41.667 0.00 0.00 0.00 2.52
158 159 4.131596 CCCCACTTACAACTCGAAAAGAA 58.868 43.478 0.00 0.00 0.00 2.52
159 160 3.135167 ACCCCACTTACAACTCGAAAAGA 59.865 43.478 0.00 0.00 0.00 2.52
160 161 3.473625 ACCCCACTTACAACTCGAAAAG 58.526 45.455 0.00 0.00 0.00 2.27
161 162 3.564053 ACCCCACTTACAACTCGAAAA 57.436 42.857 0.00 0.00 0.00 2.29
162 163 4.686191 TTACCCCACTTACAACTCGAAA 57.314 40.909 0.00 0.00 0.00 3.46
163 164 4.895668 ATTACCCCACTTACAACTCGAA 57.104 40.909 0.00 0.00 0.00 3.71
164 165 5.657745 TGATATTACCCCACTTACAACTCGA 59.342 40.000 0.00 0.00 0.00 4.04
165 166 5.909477 TGATATTACCCCACTTACAACTCG 58.091 41.667 0.00 0.00 0.00 4.18
166 167 8.747538 AAATGATATTACCCCACTTACAACTC 57.252 34.615 0.00 0.00 0.00 3.01
167 168 9.541884 AAAAATGATATTACCCCACTTACAACT 57.458 29.630 0.00 0.00 0.00 3.16
168 169 9.797556 GAAAAATGATATTACCCCACTTACAAC 57.202 33.333 0.00 0.00 0.00 3.32
169 170 9.762381 AGAAAAATGATATTACCCCACTTACAA 57.238 29.630 0.00 0.00 0.00 2.41
170 171 9.762381 AAGAAAAATGATATTACCCCACTTACA 57.238 29.630 0.00 0.00 0.00 2.41
173 174 8.758829 GGAAAGAAAAATGATATTACCCCACTT 58.241 33.333 0.00 0.00 0.00 3.16
174 175 7.068226 CGGAAAGAAAAATGATATTACCCCACT 59.932 37.037 0.00 0.00 0.00 4.00
175 176 7.200455 CGGAAAGAAAAATGATATTACCCCAC 58.800 38.462 0.00 0.00 0.00 4.61
176 177 6.322712 CCGGAAAGAAAAATGATATTACCCCA 59.677 38.462 0.00 0.00 0.00 4.96
177 178 6.548251 TCCGGAAAGAAAAATGATATTACCCC 59.452 38.462 0.00 0.00 0.00 4.95
178 179 7.576861 TCCGGAAAGAAAAATGATATTACCC 57.423 36.000 0.00 0.00 0.00 3.69
185 186 8.352942 GCATAGTATTCCGGAAAGAAAAATGAT 58.647 33.333 23.08 2.60 0.00 2.45
186 187 7.556275 AGCATAGTATTCCGGAAAGAAAAATGA 59.444 33.333 23.08 0.00 0.00 2.57
187 188 7.707104 AGCATAGTATTCCGGAAAGAAAAATG 58.293 34.615 23.08 19.01 0.00 2.32
188 189 7.881775 AGCATAGTATTCCGGAAAGAAAAAT 57.118 32.000 23.08 5.08 0.00 1.82
189 190 7.696992 AAGCATAGTATTCCGGAAAGAAAAA 57.303 32.000 23.08 5.39 0.00 1.94
190 191 8.044908 AGTAAGCATAGTATTCCGGAAAGAAAA 58.955 33.333 23.08 6.53 0.00 2.29
191 192 7.562135 AGTAAGCATAGTATTCCGGAAAGAAA 58.438 34.615 23.08 8.06 0.00 2.52
192 193 7.120923 AGTAAGCATAGTATTCCGGAAAGAA 57.879 36.000 23.08 7.09 0.00 2.52
193 194 6.726490 AGTAAGCATAGTATTCCGGAAAGA 57.274 37.500 23.08 9.71 0.00 2.52
194 195 7.787725 AAAGTAAGCATAGTATTCCGGAAAG 57.212 36.000 23.08 8.22 0.00 2.62
195 196 9.669887 TTAAAAGTAAGCATAGTATTCCGGAAA 57.330 29.630 23.08 4.58 0.00 3.13
196 197 9.321562 CTTAAAAGTAAGCATAGTATTCCGGAA 57.678 33.333 21.37 21.37 30.70 4.30
197 198 7.929785 CCTTAAAAGTAAGCATAGTATTCCGGA 59.070 37.037 0.00 0.00 36.19 5.14
198 199 7.929785 TCCTTAAAAGTAAGCATAGTATTCCGG 59.070 37.037 0.00 0.00 36.19 5.14
199 200 8.882415 TCCTTAAAAGTAAGCATAGTATTCCG 57.118 34.615 0.00 0.00 36.19 4.30
240 241 0.974010 TCCCCTAATCGAACGCCACT 60.974 55.000 0.00 0.00 0.00 4.00
283 284 5.998981 TGGTAATTTTGTATGAACCGTGAGT 59.001 36.000 0.00 0.00 0.00 3.41
287 288 5.123344 GCTCTGGTAATTTTGTATGAACCGT 59.877 40.000 0.00 0.00 0.00 4.83
289 290 6.509418 TGCTCTGGTAATTTTGTATGAACC 57.491 37.500 0.00 0.00 0.00 3.62
296 297 4.257267 GCCTTTGCTCTGGTAATTTTGT 57.743 40.909 0.00 0.00 33.53 2.83
316 317 7.268199 TCATTTGATAGAAATGATGACCAGC 57.732 36.000 5.86 0.00 40.53 4.85
328 329 7.669304 TGTTGGACCTGAAATCATTTGATAGAA 59.331 33.333 0.00 0.00 33.73 2.10
340 341 3.222603 GGTCTTGTGTTGGACCTGAAAT 58.777 45.455 5.04 0.00 45.99 2.17
371 372 0.525668 GGCGTCTACTGTGTCCATCG 60.526 60.000 0.00 0.00 0.00 3.84
382 383 2.868583 TCGATGTAGTACTGGCGTCTAC 59.131 50.000 5.39 0.00 35.86 2.59
384 385 1.941294 CTCGATGTAGTACTGGCGTCT 59.059 52.381 5.39 0.00 0.00 4.18
385 386 1.669779 ACTCGATGTAGTACTGGCGTC 59.330 52.381 5.39 8.33 0.00 5.19
387 388 3.250464 GTACTCGATGTAGTACTGGCG 57.750 52.381 5.39 4.02 45.52 5.69
393 394 4.895224 CTGCAAGGTACTCGATGTAGTA 57.105 45.455 0.00 0.00 38.49 1.82
394 395 3.784701 CTGCAAGGTACTCGATGTAGT 57.215 47.619 0.00 0.00 38.49 2.73
422 423 0.524392 CTGAGCCACGTGACTCGATC 60.524 60.000 24.09 13.09 42.86 3.69
449 450 2.919856 AGTGCACACGAGCTCCCT 60.920 61.111 21.04 0.00 36.20 4.20
469 470 2.744202 GAGACAATACAACACTGGCTGG 59.256 50.000 0.00 0.00 0.00 4.85
498 499 2.169352 CAGCTCCATGTAGGTTGTAGCT 59.831 50.000 0.00 0.00 42.75 3.32
499 500 2.168521 TCAGCTCCATGTAGGTTGTAGC 59.831 50.000 0.00 0.00 39.02 3.58
500 501 4.184629 GTTCAGCTCCATGTAGGTTGTAG 58.815 47.826 0.00 0.00 39.02 2.74
501 502 3.368013 CGTTCAGCTCCATGTAGGTTGTA 60.368 47.826 0.00 0.00 39.02 2.41
502 503 2.612972 CGTTCAGCTCCATGTAGGTTGT 60.613 50.000 0.00 0.00 39.02 3.32
503 504 2.002586 CGTTCAGCTCCATGTAGGTTG 58.997 52.381 0.00 0.00 39.02 3.77
504 505 1.623811 ACGTTCAGCTCCATGTAGGTT 59.376 47.619 0.00 0.00 39.02 3.50
505 506 1.066858 CACGTTCAGCTCCATGTAGGT 60.067 52.381 0.00 0.00 39.02 3.08
506 507 1.066858 ACACGTTCAGCTCCATGTAGG 60.067 52.381 0.00 0.00 39.47 3.18
507 508 1.995484 CACACGTTCAGCTCCATGTAG 59.005 52.381 0.00 0.00 0.00 2.74
508 509 1.343142 ACACACGTTCAGCTCCATGTA 59.657 47.619 0.00 0.00 0.00 2.29
509 510 0.106708 ACACACGTTCAGCTCCATGT 59.893 50.000 0.00 0.00 0.00 3.21
510 511 0.514255 CACACACGTTCAGCTCCATG 59.486 55.000 0.00 0.00 0.00 3.66
511 512 1.230635 GCACACACGTTCAGCTCCAT 61.231 55.000 0.00 0.00 0.00 3.41
512 513 1.887242 GCACACACGTTCAGCTCCA 60.887 57.895 0.00 0.00 0.00 3.86
513 514 1.835483 CTGCACACACGTTCAGCTCC 61.835 60.000 0.00 0.00 29.57 4.70
514 515 1.566563 CTGCACACACGTTCAGCTC 59.433 57.895 0.00 0.00 29.57 4.09
515 516 3.723172 CTGCACACACGTTCAGCT 58.277 55.556 0.00 0.00 29.57 4.24
926 927 2.021457 CAGTCCACTTCACCCGTTTTT 58.979 47.619 0.00 0.00 0.00 1.94
927 928 1.675552 CAGTCCACTTCACCCGTTTT 58.324 50.000 0.00 0.00 0.00 2.43
928 929 0.179029 CCAGTCCACTTCACCCGTTT 60.179 55.000 0.00 0.00 0.00 3.60
929 930 1.342672 ACCAGTCCACTTCACCCGTT 61.343 55.000 0.00 0.00 0.00 4.44
930 931 1.342672 AACCAGTCCACTTCACCCGT 61.343 55.000 0.00 0.00 0.00 5.28
931 932 0.682852 TAACCAGTCCACTTCACCCG 59.317 55.000 0.00 0.00 0.00 5.28
977 978 2.006888 GGAAGCGATTGATGGAAACGA 58.993 47.619 0.00 0.00 0.00 3.85
1037 1038 1.792949 GTCTTTGGTGTGAGTGTAGCG 59.207 52.381 0.00 0.00 0.00 4.26
1060 1061 3.181434 ACATGTCATGTGGTAACTGGGTT 60.181 43.478 17.74 0.00 43.01 4.11
1061 1062 2.375174 ACATGTCATGTGGTAACTGGGT 59.625 45.455 17.74 0.00 43.01 4.51
1062 1063 3.071874 ACATGTCATGTGGTAACTGGG 57.928 47.619 17.74 0.00 43.01 4.45
1072 1073 3.423539 AGCTAACCACACATGTCATGT 57.576 42.857 12.87 12.87 46.22 3.21
1073 1074 5.363101 AGATAGCTAACCACACATGTCATG 58.637 41.667 11.41 11.41 0.00 3.07
1074 1075 5.620738 AGATAGCTAACCACACATGTCAT 57.379 39.130 0.00 0.00 0.00 3.06
1075 1076 5.420725 AAGATAGCTAACCACACATGTCA 57.579 39.130 0.00 0.00 0.00 3.58
1076 1077 5.459107 CGTAAGATAGCTAACCACACATGTC 59.541 44.000 0.00 0.00 43.02 3.06
1077 1078 5.348986 CGTAAGATAGCTAACCACACATGT 58.651 41.667 0.00 0.00 43.02 3.21
1078 1079 4.209288 GCGTAAGATAGCTAACCACACATG 59.791 45.833 0.00 0.00 43.02 3.21
1079 1080 4.099573 AGCGTAAGATAGCTAACCACACAT 59.900 41.667 0.00 0.00 42.60 3.21
1080 1081 3.446161 AGCGTAAGATAGCTAACCACACA 59.554 43.478 0.00 0.00 42.60 3.72
1081 1082 4.043037 AGCGTAAGATAGCTAACCACAC 57.957 45.455 0.00 0.00 42.60 3.82
1082 1083 5.359009 ACTTAGCGTAAGATAGCTAACCACA 59.641 40.000 0.00 0.00 46.96 4.17
1083 1084 5.829829 ACTTAGCGTAAGATAGCTAACCAC 58.170 41.667 0.00 0.00 46.96 4.16
1084 1085 6.095860 TCAACTTAGCGTAAGATAGCTAACCA 59.904 38.462 0.00 0.00 46.96 3.67
1085 1086 6.501781 TCAACTTAGCGTAAGATAGCTAACC 58.498 40.000 0.00 0.00 46.96 2.85
1086 1087 7.376601 GTCTCAACTTAGCGTAAGATAGCTAAC 59.623 40.741 0.00 0.00 46.96 2.34
1088 1089 6.541278 TGTCTCAACTTAGCGTAAGATAGCTA 59.459 38.462 0.00 0.00 44.15 3.32
1089 1090 5.357314 TGTCTCAACTTAGCGTAAGATAGCT 59.643 40.000 10.46 0.00 46.53 3.32
1090 1091 5.579718 TGTCTCAACTTAGCGTAAGATAGC 58.420 41.667 10.46 0.00 40.55 2.97
1091 1092 7.251994 ACTTGTCTCAACTTAGCGTAAGATAG 58.748 38.462 10.46 5.97 40.55 2.08
1092 1093 7.154435 ACTTGTCTCAACTTAGCGTAAGATA 57.846 36.000 10.46 0.00 39.09 1.98
1093 1094 6.026947 ACTTGTCTCAACTTAGCGTAAGAT 57.973 37.500 10.46 0.00 39.09 2.40
1094 1095 5.449107 ACTTGTCTCAACTTAGCGTAAGA 57.551 39.130 10.46 0.00 39.09 2.10
1095 1096 7.813852 AATACTTGTCTCAACTTAGCGTAAG 57.186 36.000 4.02 4.02 41.51 2.34
1096 1097 7.654520 ACAAATACTTGTCTCAACTTAGCGTAA 59.345 33.333 0.00 0.00 42.25 3.18
1097 1098 7.115805 CACAAATACTTGTCTCAACTTAGCGTA 59.884 37.037 0.00 0.00 44.15 4.42
1098 1099 5.989777 ACAAATACTTGTCTCAACTTAGCGT 59.010 36.000 0.00 0.00 42.25 5.07
1099 1100 6.299604 CACAAATACTTGTCTCAACTTAGCG 58.700 40.000 0.00 0.00 44.15 4.26
1100 1101 6.426937 TCCACAAATACTTGTCTCAACTTAGC 59.573 38.462 0.00 0.00 44.15 3.09
1101 1102 7.962964 TCCACAAATACTTGTCTCAACTTAG 57.037 36.000 0.00 0.00 44.15 2.18
1102 1103 8.208224 TCTTCCACAAATACTTGTCTCAACTTA 58.792 33.333 0.00 0.00 44.15 2.24
1103 1104 7.054124 TCTTCCACAAATACTTGTCTCAACTT 58.946 34.615 0.00 0.00 44.15 2.66
1104 1105 6.591935 TCTTCCACAAATACTTGTCTCAACT 58.408 36.000 0.00 0.00 44.15 3.16
1105 1106 6.861065 TCTTCCACAAATACTTGTCTCAAC 57.139 37.500 0.00 0.00 44.15 3.18
1106 1107 7.279615 TCTTCTTCCACAAATACTTGTCTCAA 58.720 34.615 0.00 0.00 44.15 3.02
1107 1108 6.826668 TCTTCTTCCACAAATACTTGTCTCA 58.173 36.000 0.00 0.00 44.15 3.27
1108 1109 7.657761 TCTTCTTCTTCCACAAATACTTGTCTC 59.342 37.037 0.00 0.00 44.15 3.36
1109 1110 7.509546 TCTTCTTCTTCCACAAATACTTGTCT 58.490 34.615 0.00 0.00 44.15 3.41
1110 1111 7.730364 TCTTCTTCTTCCACAAATACTTGTC 57.270 36.000 0.00 0.00 44.15 3.18
1112 1113 8.840321 TCTTTCTTCTTCTTCCACAAATACTTG 58.160 33.333 0.00 0.00 38.61 3.16
1113 1114 8.980481 TCTTTCTTCTTCTTCCACAAATACTT 57.020 30.769 0.00 0.00 0.00 2.24
1114 1115 8.841300 GTTCTTTCTTCTTCTTCCACAAATACT 58.159 33.333 0.00 0.00 0.00 2.12
1115 1116 7.798982 CGTTCTTTCTTCTTCTTCCACAAATAC 59.201 37.037 0.00 0.00 0.00 1.89
1116 1117 7.041372 CCGTTCTTTCTTCTTCTTCCACAAATA 60.041 37.037 0.00 0.00 0.00 1.40
1117 1118 6.238759 CCGTTCTTTCTTCTTCTTCCACAAAT 60.239 38.462 0.00 0.00 0.00 2.32
1118 1119 5.065988 CCGTTCTTTCTTCTTCTTCCACAAA 59.934 40.000 0.00 0.00 0.00 2.83
1119 1120 4.574828 CCGTTCTTTCTTCTTCTTCCACAA 59.425 41.667 0.00 0.00 0.00 3.33
1120 1121 4.127171 CCGTTCTTTCTTCTTCTTCCACA 58.873 43.478 0.00 0.00 0.00 4.17
1121 1122 3.498777 CCCGTTCTTTCTTCTTCTTCCAC 59.501 47.826 0.00 0.00 0.00 4.02
1122 1123 3.389983 TCCCGTTCTTTCTTCTTCTTCCA 59.610 43.478 0.00 0.00 0.00 3.53
1123 1124 4.004196 TCCCGTTCTTTCTTCTTCTTCC 57.996 45.455 0.00 0.00 0.00 3.46
1124 1125 5.758784 TCTTTCCCGTTCTTTCTTCTTCTTC 59.241 40.000 0.00 0.00 0.00 2.87
1125 1126 5.527951 GTCTTTCCCGTTCTTTCTTCTTCTT 59.472 40.000 0.00 0.00 0.00 2.52
1126 1127 5.057819 GTCTTTCCCGTTCTTTCTTCTTCT 58.942 41.667 0.00 0.00 0.00 2.85
1127 1128 4.213694 GGTCTTTCCCGTTCTTTCTTCTTC 59.786 45.833 0.00 0.00 0.00 2.87
1128 1129 4.135306 GGTCTTTCCCGTTCTTTCTTCTT 58.865 43.478 0.00 0.00 0.00 2.52
1129 1130 3.135895 TGGTCTTTCCCGTTCTTTCTTCT 59.864 43.478 0.00 0.00 34.77 2.85
1130 1131 3.473625 TGGTCTTTCCCGTTCTTTCTTC 58.526 45.455 0.00 0.00 34.77 2.87
1131 1132 3.570912 TGGTCTTTCCCGTTCTTTCTT 57.429 42.857 0.00 0.00 34.77 2.52
1132 1133 3.570912 TTGGTCTTTCCCGTTCTTTCT 57.429 42.857 0.00 0.00 34.77 2.52
1133 1134 3.243301 GGTTTGGTCTTTCCCGTTCTTTC 60.243 47.826 0.00 0.00 34.77 2.62
1134 1135 2.691526 GGTTTGGTCTTTCCCGTTCTTT 59.308 45.455 0.00 0.00 34.77 2.52
1135 1136 2.304092 GGTTTGGTCTTTCCCGTTCTT 58.696 47.619 0.00 0.00 34.77 2.52
1136 1137 1.478105 GGGTTTGGTCTTTCCCGTTCT 60.478 52.381 0.00 0.00 34.77 3.01
1137 1138 0.956633 GGGTTTGGTCTTTCCCGTTC 59.043 55.000 0.00 0.00 34.77 3.95
1138 1139 0.259356 TGGGTTTGGTCTTTCCCGTT 59.741 50.000 0.00 0.00 42.54 4.44
1139 1140 0.179001 CTGGGTTTGGTCTTTCCCGT 60.179 55.000 0.00 0.00 42.54 5.28
1140 1141 0.179001 ACTGGGTTTGGTCTTTCCCG 60.179 55.000 0.00 0.00 42.54 5.14
1141 1142 1.617322 GACTGGGTTTGGTCTTTCCC 58.383 55.000 0.00 0.00 40.26 3.97
1142 1143 1.235724 CGACTGGGTTTGGTCTTTCC 58.764 55.000 0.00 0.00 0.00 3.13
1143 1144 1.871676 GACGACTGGGTTTGGTCTTTC 59.128 52.381 0.00 0.00 0.00 2.62
1144 1145 1.808891 CGACGACTGGGTTTGGTCTTT 60.809 52.381 0.00 0.00 0.00 2.52
1145 1146 0.249741 CGACGACTGGGTTTGGTCTT 60.250 55.000 0.00 0.00 0.00 3.01
1146 1147 1.366366 CGACGACTGGGTTTGGTCT 59.634 57.895 0.00 0.00 0.00 3.85
1147 1148 0.942884 GACGACGACTGGGTTTGGTC 60.943 60.000 0.00 0.00 0.00 4.02
1148 1149 1.068585 GACGACGACTGGGTTTGGT 59.931 57.895 0.00 0.00 0.00 3.67
1149 1150 1.666872 GGACGACGACTGGGTTTGG 60.667 63.158 0.00 0.00 0.00 3.28
1150 1151 1.666872 GGGACGACGACTGGGTTTG 60.667 63.158 0.00 0.00 0.00 2.93
1151 1152 1.835712 AGGGACGACGACTGGGTTT 60.836 57.895 0.00 0.00 0.00 3.27
1152 1153 2.203596 AGGGACGACGACTGGGTT 60.204 61.111 0.00 0.00 0.00 4.11
1153 1154 2.989824 CAGGGACGACGACTGGGT 60.990 66.667 0.00 0.00 0.00 4.51
1157 1158 1.461091 TTTGCTCAGGGACGACGACT 61.461 55.000 0.00 0.00 0.00 4.18
1160 1161 0.319555 TTCTTTGCTCAGGGACGACG 60.320 55.000 0.00 0.00 0.00 5.12
1162 1163 1.691976 TCTTTCTTTGCTCAGGGACGA 59.308 47.619 0.00 0.00 0.00 4.20
1170 1171 2.096657 GGATCCGCTTCTTTCTTTGCTC 59.903 50.000 0.00 0.00 0.00 4.26
1174 1175 3.019564 CCATGGATCCGCTTCTTTCTTT 58.980 45.455 5.56 0.00 0.00 2.52
1187 1188 2.707902 GGGACGAAAGCCATGGATC 58.292 57.895 18.40 9.24 0.00 3.36
1629 1630 0.249322 CACGGAGGTCGCGGAAATAT 60.249 55.000 6.13 0.00 43.89 1.28
1688 1689 2.349817 CGTACGTACGTGAGGTGAAACT 60.350 50.000 33.95 1.29 44.13 2.66
1735 1736 9.616634 ACGGACACAAATACAACTATATATACG 57.383 33.333 0.00 0.00 0.00 3.06
1740 1741 6.919662 CCGTACGGACACAAATACAACTATAT 59.080 38.462 30.64 0.00 37.50 0.86
1742 1743 5.104374 CCGTACGGACACAAATACAACTAT 58.896 41.667 30.64 0.00 37.50 2.12
1743 1744 4.022416 ACCGTACGGACACAAATACAACTA 60.022 41.667 39.52 0.00 38.96 2.24
1744 1745 3.243839 ACCGTACGGACACAAATACAACT 60.244 43.478 39.52 9.98 38.96 3.16
1745 1746 3.059166 ACCGTACGGACACAAATACAAC 58.941 45.455 39.52 0.00 38.96 3.32
1769 1770 2.682856 CCAATAACCGCACAATAGCACT 59.317 45.455 0.00 0.00 0.00 4.40
1774 1775 3.011119 GTCACCCAATAACCGCACAATA 58.989 45.455 0.00 0.00 0.00 1.90
1781 1782 2.367030 TACACGTCACCCAATAACCG 57.633 50.000 0.00 0.00 0.00 4.44
1785 1786 3.101437 ACCTGATACACGTCACCCAATA 58.899 45.455 0.00 0.00 0.00 1.90
1789 1790 0.606604 ACACCTGATACACGTCACCC 59.393 55.000 0.00 0.00 0.00 4.61
1812 1813 8.029522 CGCATCCTGTATACATAAGACAGTAAT 58.970 37.037 5.91 0.00 39.16 1.89
1813 1814 7.013942 ACGCATCCTGTATACATAAGACAGTAA 59.986 37.037 5.91 0.00 39.16 2.24
1814 1815 6.489022 ACGCATCCTGTATACATAAGACAGTA 59.511 38.462 5.91 0.00 39.16 2.74
1815 1816 5.302059 ACGCATCCTGTATACATAAGACAGT 59.698 40.000 5.91 0.00 39.16 3.55
1816 1817 5.773575 ACGCATCCTGTATACATAAGACAG 58.226 41.667 5.91 0.00 40.26 3.51
1817 1818 5.784578 ACGCATCCTGTATACATAAGACA 57.215 39.130 5.91 0.00 0.00 3.41
1818 1819 6.253727 GCATACGCATCCTGTATACATAAGAC 59.746 42.308 5.91 0.00 38.36 3.01
1819 1820 6.071616 TGCATACGCATCCTGTATACATAAGA 60.072 38.462 5.91 4.55 45.36 2.10
1820 1821 6.099341 TGCATACGCATCCTGTATACATAAG 58.901 40.000 5.91 0.00 45.36 1.73
1821 1822 6.031751 TGCATACGCATCCTGTATACATAA 57.968 37.500 5.91 0.00 45.36 1.90
1822 1823 5.652994 TGCATACGCATCCTGTATACATA 57.347 39.130 5.91 0.00 45.36 2.29
1823 1824 4.535526 TGCATACGCATCCTGTATACAT 57.464 40.909 5.91 0.00 45.36 2.29
1889 1891 5.574443 GGCTCAGAAAATTATCACAAGCAAC 59.426 40.000 0.00 0.00 0.00 4.17
1899 1901 3.782889 GCCGTTGGCTCAGAAAATTAT 57.217 42.857 0.00 0.00 46.69 1.28
1968 1970 1.065273 GCCGGAGCATCAGCAAATG 59.935 57.895 5.05 0.00 45.49 2.32
1992 2000 4.701765 CATCTCAGAATCTACCAGGTTGG 58.298 47.826 0.00 0.00 45.02 3.77
2028 2036 5.118990 GCAGGCAGTATAAGATGAGAACAA 58.881 41.667 0.00 0.00 0.00 2.83
2040 2048 3.069443 TCATCAACATCGCAGGCAGTATA 59.931 43.478 0.00 0.00 0.00 1.47
2041 2049 2.158914 TCATCAACATCGCAGGCAGTAT 60.159 45.455 0.00 0.00 0.00 2.12
2064 2072 3.525862 ACAGAGGATCAAAAGGAGGACT 58.474 45.455 0.00 0.00 37.82 3.85
2120 2128 6.636562 TCCGGTTTATTAACAAAGAAGCAA 57.363 33.333 0.00 0.00 35.92 3.91
2159 2168 1.135139 TGTACTCTGCTGATCTTCCGC 59.865 52.381 0.00 0.00 0.00 5.54
2186 2197 6.315144 GTGGGTGTTATTTGCTTTTGTTCTTT 59.685 34.615 0.00 0.00 0.00 2.52
2197 2208 4.329462 TTTTCTGGTGGGTGTTATTTGC 57.671 40.909 0.00 0.00 0.00 3.68
2233 2245 5.088739 GGCACTCGAAGAAAATTGTATGTG 58.911 41.667 0.00 0.00 34.09 3.21
2234 2246 4.759693 TGGCACTCGAAGAAAATTGTATGT 59.240 37.500 0.00 0.00 34.09 2.29
2239 2251 4.424061 TGATGGCACTCGAAGAAAATTG 57.576 40.909 0.00 0.00 34.09 2.32
2243 2255 2.844946 TGTTGATGGCACTCGAAGAAA 58.155 42.857 0.00 0.00 34.09 2.52
2244 2256 2.542020 TGTTGATGGCACTCGAAGAA 57.458 45.000 0.00 0.00 34.09 2.52
2245 2257 2.743664 CAATGTTGATGGCACTCGAAGA 59.256 45.455 0.00 0.00 0.00 2.87
2271 2283 3.882888 ACTCTTTTTGTTTCTGGCGATGA 59.117 39.130 0.00 0.00 0.00 2.92
2278 2290 5.691754 GGCAATGGTACTCTTTTTGTTTCTG 59.308 40.000 0.00 0.00 0.00 3.02
2285 2297 4.500716 CGTTTGGGCAATGGTACTCTTTTT 60.501 41.667 0.00 0.00 0.00 1.94
2310 2322 2.613977 CCTCTTCATCGGCTCACAAAGT 60.614 50.000 0.00 0.00 0.00 2.66
2368 2380 1.424638 AAGGTATGGGGACGATCCTG 58.575 55.000 0.00 0.00 36.57 3.86
2369 2381 2.172717 CAAAAGGTATGGGGACGATCCT 59.827 50.000 0.00 0.00 36.57 3.24
2415 2434 1.533129 GCGTTTTGCTCCGACTTTGTT 60.533 47.619 0.00 0.00 41.73 2.83
2460 2479 3.251004 GCTAGCGTTTCAATATCAAGGGG 59.749 47.826 0.00 0.00 0.00 4.79
2489 2508 0.804544 CTGGCAATGAAAGCGCATGG 60.805 55.000 11.47 0.00 0.00 3.66
2549 2568 1.071471 ACAACTCAAGAGCCCGTGG 59.929 57.895 0.00 0.00 0.00 4.94
2554 2573 2.615869 CTCTAGCACAACTCAAGAGCC 58.384 52.381 0.00 0.00 27.09 4.70
2583 2602 1.405797 CGAGTCTACCTCTGTCTCGGT 60.406 57.143 0.00 0.00 42.45 4.69
2586 2605 2.557317 CTCCGAGTCTACCTCTGTCTC 58.443 57.143 0.00 0.00 38.11 3.36
2662 2706 3.161067 AGGAGGACATGTCTATCATCGG 58.839 50.000 24.50 0.00 34.09 4.18
2692 2736 0.034896 AAACGAGGCTCGGACATTGT 59.965 50.000 36.81 14.65 45.59 2.71
2694 2738 2.981859 ATAAACGAGGCTCGGACATT 57.018 45.000 36.81 26.37 45.59 2.71
2701 2745 5.485662 AACTGCATAAATAAACGAGGCTC 57.514 39.130 3.87 3.87 0.00 4.70
2758 2802 6.503924 TGGCAATAATAGACACCCCACTATAT 59.496 38.462 0.00 0.00 0.00 0.86
2775 2819 5.125257 CACTTCATGTGGTGTATGGCAATAA 59.875 40.000 0.00 0.00 42.68 1.40
2784 2828 3.673902 CATGGTCACTTCATGTGGTGTA 58.326 45.455 15.98 8.21 46.20 2.90
2824 2868 1.831106 TGCCATAGTCGTGATGGAAGT 59.169 47.619 14.49 0.00 45.89 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.