Multiple sequence alignment - TraesCS2D01G174900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G174900 chr2D 100.000 3116 0 0 1 3116 118383961 118380846 0.000000e+00 5755.0
1 TraesCS2D01G174900 chr2D 96.333 1418 31 1 677 2094 575270152 575268756 0.000000e+00 2311.0
2 TraesCS2D01G174900 chr2D 98.008 1205 24 0 890 2094 263423770 263422566 0.000000e+00 2093.0
3 TraesCS2D01G174900 chr2D 99.027 1028 8 2 2090 3116 263422509 263421483 0.000000e+00 1842.0
4 TraesCS2D01G174900 chr2D 98.350 1030 13 4 2090 3116 575268699 575267671 0.000000e+00 1805.0
5 TraesCS2D01G174900 chr2D 94.249 313 14 4 314 624 118530027 118529717 2.810000e-130 475.0
6 TraesCS2D01G174900 chr2D 95.876 97 2 1 1 95 118530294 118530198 4.160000e-34 156.0
7 TraesCS2D01G174900 chr4D 96.068 1475 35 3 622 2094 264461280 264462733 0.000000e+00 2381.0
8 TraesCS2D01G174900 chr4D 98.350 1030 13 4 2090 3116 264462790 264463818 0.000000e+00 1805.0
9 TraesCS2D01G174900 chr6A 96.474 1418 27 12 679 2094 526165107 526163711 0.000000e+00 2320.0
10 TraesCS2D01G174900 chr6A 98.345 1027 15 2 2090 3116 526163654 526162630 0.000000e+00 1801.0
11 TraesCS2D01G174900 chr4A 95.698 1418 45 8 677 2094 359640375 359638974 0.000000e+00 2266.0
12 TraesCS2D01G174900 chr4A 96.987 1029 28 3 2090 3116 359638917 359637890 0.000000e+00 1725.0
13 TraesCS2D01G174900 chr4A 95.474 464 21 0 679 1142 725532214 725532677 0.000000e+00 741.0
14 TraesCS2D01G174900 chr2B 97.943 1118 22 1 977 2094 706585118 706586234 0.000000e+00 1936.0
15 TraesCS2D01G174900 chr2B 97.379 1030 21 5 2090 3116 706586291 706587317 0.000000e+00 1748.0
16 TraesCS2D01G174900 chr2B 92.157 255 5 6 382 624 170782745 170782996 2.300000e-91 346.0
17 TraesCS2D01G174900 chr2B 93.220 236 15 1 677 911 706584902 706585137 2.300000e-91 346.0
18 TraesCS2D01G174900 chr2B 96.190 105 4 0 1 105 170782448 170782552 4.130000e-39 172.0
19 TraesCS2D01G174900 chr3B 98.058 1030 16 3 2090 3116 739841438 739842466 0.000000e+00 1788.0
20 TraesCS2D01G174900 chr3B 95.316 790 21 3 2090 2864 758390912 758391700 0.000000e+00 1240.0
21 TraesCS2D01G174900 chr3B 98.929 467 5 0 1628 2094 739840915 739841381 0.000000e+00 835.0
22 TraesCS2D01G174900 chr3B 94.700 434 8 8 890 1323 739839846 739840264 0.000000e+00 660.0
23 TraesCS2D01G174900 chr3B 98.905 274 2 1 1316 1589 739840645 739840917 3.610000e-134 488.0
24 TraesCS2D01G174900 chr3B 97.143 210 5 1 1885 2094 758390654 758390862 1.370000e-93 353.0
25 TraesCS2D01G174900 chr3B 92.490 253 10 6 2864 3116 758392218 758392461 1.370000e-93 353.0
26 TraesCS2D01G174900 chr3B 85.397 315 31 9 623 931 739839630 739839935 2.330000e-81 313.0
27 TraesCS2D01G174900 chr3B 93.564 202 13 0 1252 1453 758389167 758389368 5.050000e-78 302.0
28 TraesCS2D01G174900 chr4B 92.294 558 21 3 869 1426 626780761 626781296 0.000000e+00 773.0
29 TraesCS2D01G174900 chr4B 98.485 66 1 0 680 745 37091977 37092042 1.960000e-22 117.0
30 TraesCS2D01G174900 chr4B 91.781 73 5 1 623 695 669591170 669591241 1.980000e-17 100.0
31 TraesCS2D01G174900 chr1D 89.803 559 27 4 2104 2660 209572300 209571770 0.000000e+00 689.0
32 TraesCS2D01G174900 chr1D 95.975 323 13 0 1404 1726 209725239 209724917 2.750000e-145 525.0
33 TraesCS2D01G174900 chr1D 89.231 260 24 3 740 995 395800053 395800312 3.880000e-84 322.0
34 TraesCS2D01G174900 chr1D 95.556 45 1 1 1763 1806 209574746 209574702 1.550000e-08 71.3
35 TraesCS2D01G174900 chr6D 94.226 381 16 6 2488 2864 249489221 249489599 7.490000e-161 577.0
36 TraesCS2D01G174900 chr6D 92.095 253 10 7 2864 3116 249490104 249490346 6.400000e-92 348.0
37 TraesCS2D01G174900 chr2A 95.469 309 10 2 320 624 120444366 120444058 1.000000e-134 490.0
38 TraesCS2D01G174900 chr2A 93.684 95 6 0 1 95 120444638 120444544 3.240000e-30 143.0
39 TraesCS2D01G174900 chr5B 93.226 310 21 0 1417 1726 203112650 203112959 1.020000e-124 457.0
40 TraesCS2D01G174900 chr7D 91.558 308 25 1 1717 2023 613624395 613624702 1.030000e-114 424.0
41 TraesCS2D01G174900 chr3A 88.839 224 18 6 723 940 648609607 648609385 5.120000e-68 268.0
42 TraesCS2D01G174900 chr5D 95.122 82 4 0 623 704 114804771 114804852 2.520000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G174900 chr2D 118380846 118383961 3115 True 5755.000000 5755 100.000000 1 3116 1 chr2D.!!$R1 3115
1 TraesCS2D01G174900 chr2D 575267671 575270152 2481 True 2058.000000 2311 97.341500 677 3116 2 chr2D.!!$R4 2439
2 TraesCS2D01G174900 chr2D 263421483 263423770 2287 True 1967.500000 2093 98.517500 890 3116 2 chr2D.!!$R3 2226
3 TraesCS2D01G174900 chr2D 118529717 118530294 577 True 315.500000 475 95.062500 1 624 2 chr2D.!!$R2 623
4 TraesCS2D01G174900 chr4D 264461280 264463818 2538 False 2093.000000 2381 97.209000 622 3116 2 chr4D.!!$F1 2494
5 TraesCS2D01G174900 chr6A 526162630 526165107 2477 True 2060.500000 2320 97.409500 679 3116 2 chr6A.!!$R1 2437
6 TraesCS2D01G174900 chr4A 359637890 359640375 2485 True 1995.500000 2266 96.342500 677 3116 2 chr4A.!!$R1 2439
7 TraesCS2D01G174900 chr2B 706584902 706587317 2415 False 1343.333333 1936 96.180667 677 3116 3 chr2B.!!$F2 2439
8 TraesCS2D01G174900 chr2B 170782448 170782996 548 False 259.000000 346 94.173500 1 624 2 chr2B.!!$F1 623
9 TraesCS2D01G174900 chr3B 739839630 739842466 2836 False 816.800000 1788 95.197800 623 3116 5 chr3B.!!$F1 2493
10 TraesCS2D01G174900 chr3B 758389167 758392461 3294 False 562.000000 1240 94.628250 1252 3116 4 chr3B.!!$F2 1864
11 TraesCS2D01G174900 chr4B 626780761 626781296 535 False 773.000000 773 92.294000 869 1426 1 chr4B.!!$F2 557
12 TraesCS2D01G174900 chr1D 209571770 209574746 2976 True 380.150000 689 92.679500 1763 2660 2 chr1D.!!$R2 897
13 TraesCS2D01G174900 chr6D 249489221 249490346 1125 False 462.500000 577 93.160500 2488 3116 2 chr6D.!!$F1 628
14 TraesCS2D01G174900 chr2A 120444058 120444638 580 True 316.500000 490 94.576500 1 624 2 chr2A.!!$R1 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
305 306 0.106769 TGTTTGACAGCAGGGCAAGA 60.107 50.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2121 6176 0.173708 AAGCGGACGACATCTCCTTC 59.826 55.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.440539 AGAGTAAATATCCGCCTGCG 57.559 50.000 4.20 4.20 39.44 5.18
30 31 1.961394 AGAGTAAATATCCGCCTGCGA 59.039 47.619 13.94 0.00 42.83 5.10
31 32 2.059541 GAGTAAATATCCGCCTGCGAC 58.940 52.381 13.94 1.02 42.83 5.19
32 33 1.687123 AGTAAATATCCGCCTGCGACT 59.313 47.619 13.94 3.54 42.83 4.18
33 34 1.792949 GTAAATATCCGCCTGCGACTG 59.207 52.381 13.94 0.00 42.83 3.51
34 35 1.160329 AAATATCCGCCTGCGACTGC 61.160 55.000 13.94 0.00 42.83 4.40
44 45 4.785950 GCGACTGCGAGATACACA 57.214 55.556 0.00 0.00 40.82 3.72
45 46 3.258225 GCGACTGCGAGATACACAT 57.742 52.632 0.00 0.00 40.82 3.21
46 47 0.848942 GCGACTGCGAGATACACATG 59.151 55.000 0.00 0.00 40.82 3.21
47 48 0.848942 CGACTGCGAGATACACATGC 59.151 55.000 0.00 0.00 40.82 4.06
48 49 1.798813 CGACTGCGAGATACACATGCA 60.799 52.381 0.00 0.00 40.82 3.96
49 50 2.477825 GACTGCGAGATACACATGCAT 58.522 47.619 0.00 0.00 34.66 3.96
50 51 2.207590 ACTGCGAGATACACATGCATG 58.792 47.619 25.09 25.09 34.66 4.06
51 52 0.939419 TGCGAGATACACATGCATGC 59.061 50.000 26.53 11.82 0.00 4.06
52 53 1.224075 GCGAGATACACATGCATGCT 58.776 50.000 26.53 14.65 0.00 3.79
53 54 1.070108 GCGAGATACACATGCATGCTG 60.070 52.381 26.53 22.99 0.00 4.41
54 55 1.070108 CGAGATACACATGCATGCTGC 60.070 52.381 26.53 11.45 45.29 5.25
55 56 2.219458 GAGATACACATGCATGCTGCT 58.781 47.619 26.53 15.81 45.31 4.24
56 57 2.219458 AGATACACATGCATGCTGCTC 58.781 47.619 26.53 19.81 45.31 4.26
57 58 1.944709 GATACACATGCATGCTGCTCA 59.055 47.619 26.53 12.24 45.31 4.26
58 59 1.089112 TACACATGCATGCTGCTCAC 58.911 50.000 26.53 0.00 45.31 3.51
59 60 0.608308 ACACATGCATGCTGCTCACT 60.608 50.000 26.53 1.08 45.31 3.41
60 61 0.526211 CACATGCATGCTGCTCACTT 59.474 50.000 26.53 0.28 45.31 3.16
61 62 1.741145 CACATGCATGCTGCTCACTTA 59.259 47.619 26.53 0.00 45.31 2.24
62 63 2.357952 CACATGCATGCTGCTCACTTAT 59.642 45.455 26.53 0.00 45.31 1.73
63 64 3.021695 ACATGCATGCTGCTCACTTATT 58.978 40.909 26.53 0.00 45.31 1.40
64 65 3.446161 ACATGCATGCTGCTCACTTATTT 59.554 39.130 26.53 0.00 45.31 1.40
65 66 3.770263 TGCATGCTGCTCACTTATTTC 57.230 42.857 20.33 0.00 45.31 2.17
66 67 2.096335 TGCATGCTGCTCACTTATTTCG 59.904 45.455 20.33 0.00 45.31 3.46
67 68 2.713011 CATGCTGCTCACTTATTTCGC 58.287 47.619 0.00 0.00 0.00 4.70
68 69 2.099141 TGCTGCTCACTTATTTCGCT 57.901 45.000 0.00 0.00 0.00 4.93
69 70 2.002586 TGCTGCTCACTTATTTCGCTC 58.997 47.619 0.00 0.00 0.00 5.03
70 71 2.275318 GCTGCTCACTTATTTCGCTCT 58.725 47.619 0.00 0.00 0.00 4.09
71 72 2.030213 GCTGCTCACTTATTTCGCTCTG 59.970 50.000 0.00 0.00 0.00 3.35
72 73 2.002586 TGCTCACTTATTTCGCTCTGC 58.997 47.619 0.00 0.00 0.00 4.26
73 74 2.275318 GCTCACTTATTTCGCTCTGCT 58.725 47.619 0.00 0.00 0.00 4.24
74 75 2.283884 GCTCACTTATTTCGCTCTGCTC 59.716 50.000 0.00 0.00 0.00 4.26
75 76 3.779759 CTCACTTATTTCGCTCTGCTCT 58.220 45.455 0.00 0.00 0.00 4.09
76 77 3.515630 TCACTTATTTCGCTCTGCTCTG 58.484 45.455 0.00 0.00 0.00 3.35
77 78 2.030213 CACTTATTTCGCTCTGCTCTGC 59.970 50.000 0.00 0.00 0.00 4.26
78 79 2.093764 ACTTATTTCGCTCTGCTCTGCT 60.094 45.455 0.00 0.00 0.00 4.24
79 80 2.680312 TATTTCGCTCTGCTCTGCTT 57.320 45.000 0.00 0.00 0.00 3.91
80 81 1.367659 ATTTCGCTCTGCTCTGCTTC 58.632 50.000 0.00 0.00 0.00 3.86
81 82 0.671781 TTTCGCTCTGCTCTGCTTCC 60.672 55.000 0.00 0.00 0.00 3.46
82 83 1.539560 TTCGCTCTGCTCTGCTTCCT 61.540 55.000 0.00 0.00 0.00 3.36
83 84 1.519013 CGCTCTGCTCTGCTTCCTC 60.519 63.158 0.00 0.00 0.00 3.71
84 85 1.595882 GCTCTGCTCTGCTTCCTCA 59.404 57.895 0.00 0.00 0.00 3.86
85 86 0.460635 GCTCTGCTCTGCTTCCTCAG 60.461 60.000 0.00 0.00 35.46 3.35
96 97 2.206815 CTTCCTCAGCATCTCTGACG 57.793 55.000 0.00 0.00 46.34 4.35
97 98 1.747924 CTTCCTCAGCATCTCTGACGA 59.252 52.381 0.00 0.00 46.34 4.20
98 99 2.064434 TCCTCAGCATCTCTGACGAT 57.936 50.000 0.00 0.00 46.34 3.73
99 100 1.952990 TCCTCAGCATCTCTGACGATC 59.047 52.381 0.00 0.00 46.34 3.69
100 101 1.000385 CCTCAGCATCTCTGACGATCC 60.000 57.143 0.00 0.00 46.34 3.36
101 102 1.955778 CTCAGCATCTCTGACGATCCT 59.044 52.381 0.00 0.00 46.34 3.24
102 103 2.361757 CTCAGCATCTCTGACGATCCTT 59.638 50.000 0.00 0.00 46.34 3.36
103 104 2.360483 TCAGCATCTCTGACGATCCTTC 59.640 50.000 0.00 0.00 46.34 3.46
104 105 2.100418 CAGCATCTCTGACGATCCTTCA 59.900 50.000 0.00 0.00 45.72 3.02
105 106 2.762887 AGCATCTCTGACGATCCTTCAA 59.237 45.455 0.00 0.00 0.00 2.69
106 107 3.387374 AGCATCTCTGACGATCCTTCAAT 59.613 43.478 0.00 0.00 0.00 2.57
107 108 4.125703 GCATCTCTGACGATCCTTCAATT 58.874 43.478 0.00 0.00 0.00 2.32
108 109 5.069648 AGCATCTCTGACGATCCTTCAATTA 59.930 40.000 0.00 0.00 0.00 1.40
109 110 5.755375 GCATCTCTGACGATCCTTCAATTAA 59.245 40.000 0.00 0.00 0.00 1.40
110 111 6.073873 GCATCTCTGACGATCCTTCAATTAAG 60.074 42.308 0.00 0.00 34.73 1.85
111 112 5.352284 TCTCTGACGATCCTTCAATTAAGC 58.648 41.667 0.00 0.00 33.49 3.09
112 113 5.127845 TCTCTGACGATCCTTCAATTAAGCT 59.872 40.000 0.00 0.00 33.49 3.74
113 114 5.111989 TCTGACGATCCTTCAATTAAGCTG 58.888 41.667 0.00 0.00 33.49 4.24
114 115 4.832248 TGACGATCCTTCAATTAAGCTGT 58.168 39.130 0.00 0.00 33.49 4.40
115 116 4.631377 TGACGATCCTTCAATTAAGCTGTG 59.369 41.667 0.00 0.00 33.49 3.66
116 117 4.832248 ACGATCCTTCAATTAAGCTGTGA 58.168 39.130 0.00 0.00 33.49 3.58
117 118 4.872691 ACGATCCTTCAATTAAGCTGTGAG 59.127 41.667 0.00 0.00 33.49 3.51
118 119 4.872691 CGATCCTTCAATTAAGCTGTGAGT 59.127 41.667 0.00 0.00 33.49 3.41
119 120 5.006165 CGATCCTTCAATTAAGCTGTGAGTC 59.994 44.000 0.00 0.00 33.49 3.36
120 121 5.489792 TCCTTCAATTAAGCTGTGAGTCT 57.510 39.130 0.00 0.00 33.49 3.24
121 122 5.482908 TCCTTCAATTAAGCTGTGAGTCTC 58.517 41.667 0.00 0.00 33.49 3.36
122 123 4.633565 CCTTCAATTAAGCTGTGAGTCTCC 59.366 45.833 0.00 0.00 33.49 3.71
123 124 4.207891 TCAATTAAGCTGTGAGTCTCCC 57.792 45.455 0.00 0.00 0.00 4.30
124 125 2.932614 CAATTAAGCTGTGAGTCTCCCG 59.067 50.000 0.00 0.00 0.00 5.14
125 126 0.246635 TTAAGCTGTGAGTCTCCCGC 59.753 55.000 0.00 0.00 0.00 6.13
126 127 0.898326 TAAGCTGTGAGTCTCCCGCA 60.898 55.000 0.00 0.00 0.00 5.69
127 128 1.758440 AAGCTGTGAGTCTCCCGCAA 61.758 55.000 0.00 0.00 0.00 4.85
128 129 1.301716 GCTGTGAGTCTCCCGCAAA 60.302 57.895 0.00 0.00 0.00 3.68
129 130 0.884704 GCTGTGAGTCTCCCGCAAAA 60.885 55.000 0.00 0.00 0.00 2.44
130 131 1.593196 CTGTGAGTCTCCCGCAAAAA 58.407 50.000 0.00 0.00 0.00 1.94
160 161 6.663944 AAAAACTGTGAGTCTGTGACTAAC 57.336 37.500 7.98 7.98 43.53 2.34
161 162 5.599999 AAACTGTGAGTCTGTGACTAACT 57.400 39.130 14.23 0.00 42.80 2.24
162 163 4.576216 ACTGTGAGTCTGTGACTAACTG 57.424 45.455 15.86 15.86 42.80 3.16
163 164 4.207955 ACTGTGAGTCTGTGACTAACTGA 58.792 43.478 21.21 0.00 42.80 3.41
174 175 8.809468 TCTGTGACTAACTGACTATACATCTT 57.191 34.615 0.00 0.00 32.31 2.40
175 176 9.244292 TCTGTGACTAACTGACTATACATCTTT 57.756 33.333 0.00 0.00 32.31 2.52
176 177 9.862371 CTGTGACTAACTGACTATACATCTTTT 57.138 33.333 0.00 0.00 0.00 2.27
177 178 9.639601 TGTGACTAACTGACTATACATCTTTTG 57.360 33.333 0.00 0.00 0.00 2.44
178 179 9.640963 GTGACTAACTGACTATACATCTTTTGT 57.359 33.333 0.00 0.00 42.62 2.83
214 215 8.893563 TCCAAAGATTTGTAATTATTCTGGGT 57.106 30.769 4.71 0.00 36.45 4.51
215 216 9.320295 TCCAAAGATTTGTAATTATTCTGGGTT 57.680 29.630 4.71 0.00 36.45 4.11
216 217 9.369904 CCAAAGATTTGTAATTATTCTGGGTTG 57.630 33.333 4.71 0.00 36.45 3.77
217 218 8.872845 CAAAGATTTGTAATTATTCTGGGTTGC 58.127 33.333 0.00 0.00 33.59 4.17
218 219 7.112452 AGATTTGTAATTATTCTGGGTTGCC 57.888 36.000 0.00 0.00 0.00 4.52
219 220 5.669164 TTTGTAATTATTCTGGGTTGCCC 57.331 39.130 0.00 0.00 45.71 5.36
220 221 4.601406 TGTAATTATTCTGGGTTGCCCT 57.399 40.909 5.73 0.00 45.70 5.19
221 222 4.277476 TGTAATTATTCTGGGTTGCCCTG 58.723 43.478 5.73 5.29 45.70 4.45
222 223 3.473113 AATTATTCTGGGTTGCCCTGT 57.527 42.857 5.73 0.00 45.70 4.00
223 224 2.990740 TTATTCTGGGTTGCCCTGTT 57.009 45.000 5.73 1.26 45.70 3.16
224 225 2.990740 TATTCTGGGTTGCCCTGTTT 57.009 45.000 5.73 0.95 45.70 2.83
225 226 1.632589 ATTCTGGGTTGCCCTGTTTC 58.367 50.000 5.73 0.00 45.70 2.78
226 227 0.469144 TTCTGGGTTGCCCTGTTTCC 60.469 55.000 5.73 0.00 45.70 3.13
227 228 1.153756 CTGGGTTGCCCTGTTTCCT 59.846 57.895 5.73 0.00 45.70 3.36
228 229 0.404040 CTGGGTTGCCCTGTTTCCTA 59.596 55.000 5.73 0.00 45.70 2.94
229 230 0.404040 TGGGTTGCCCTGTTTCCTAG 59.596 55.000 5.73 0.00 45.70 3.02
230 231 0.696501 GGGTTGCCCTGTTTCCTAGA 59.303 55.000 0.00 0.00 41.34 2.43
231 232 1.340114 GGGTTGCCCTGTTTCCTAGAG 60.340 57.143 0.00 0.00 41.34 2.43
232 233 1.628846 GGTTGCCCTGTTTCCTAGAGA 59.371 52.381 0.00 0.00 0.00 3.10
233 234 2.039879 GGTTGCCCTGTTTCCTAGAGAA 59.960 50.000 0.00 0.00 0.00 2.87
234 235 3.075148 GTTGCCCTGTTTCCTAGAGAAC 58.925 50.000 0.00 0.00 32.95 3.01
235 236 2.334977 TGCCCTGTTTCCTAGAGAACA 58.665 47.619 9.54 9.54 32.95 3.18
236 237 2.912956 TGCCCTGTTTCCTAGAGAACAT 59.087 45.455 10.14 0.00 32.95 2.71
237 238 3.330701 TGCCCTGTTTCCTAGAGAACATT 59.669 43.478 10.14 0.00 32.95 2.71
238 239 4.534500 TGCCCTGTTTCCTAGAGAACATTA 59.466 41.667 10.14 0.00 32.95 1.90
239 240 5.119694 GCCCTGTTTCCTAGAGAACATTAG 58.880 45.833 10.14 5.29 32.95 1.73
240 241 5.675538 CCCTGTTTCCTAGAGAACATTAGG 58.324 45.833 10.14 8.64 38.22 2.69
241 242 5.119694 CCTGTTTCCTAGAGAACATTAGGC 58.880 45.833 10.14 0.00 37.05 3.93
242 243 5.099042 TGTTTCCTAGAGAACATTAGGCC 57.901 43.478 0.00 0.00 37.05 5.19
243 244 4.783227 TGTTTCCTAGAGAACATTAGGCCT 59.217 41.667 11.78 11.78 37.05 5.19
244 245 5.962031 TGTTTCCTAGAGAACATTAGGCCTA 59.038 40.000 8.91 8.91 37.05 3.93
245 246 6.615726 TGTTTCCTAGAGAACATTAGGCCTAT 59.384 38.462 14.74 0.00 37.05 2.57
246 247 7.787904 TGTTTCCTAGAGAACATTAGGCCTATA 59.212 37.037 14.74 5.18 37.05 1.31
247 248 8.648693 GTTTCCTAGAGAACATTAGGCCTATAA 58.351 37.037 14.74 0.80 37.05 0.98
248 249 7.778185 TCCTAGAGAACATTAGGCCTATAAC 57.222 40.000 14.74 4.24 37.05 1.89
249 250 7.302948 TCCTAGAGAACATTAGGCCTATAACA 58.697 38.462 14.74 0.00 37.05 2.41
250 251 7.956315 TCCTAGAGAACATTAGGCCTATAACAT 59.044 37.037 14.74 0.29 37.05 2.71
251 252 8.598041 CCTAGAGAACATTAGGCCTATAACATT 58.402 37.037 14.74 4.19 30.80 2.71
278 279 9.991906 ATTAGCTAGTTAGTTAAACACAAGTCA 57.008 29.630 0.00 0.00 40.83 3.41
279 280 9.991906 TTAGCTAGTTAGTTAAACACAAGTCAT 57.008 29.630 0.00 0.00 40.83 3.06
280 281 8.904099 AGCTAGTTAGTTAAACACAAGTCATT 57.096 30.769 0.00 0.00 40.83 2.57
281 282 9.991906 AGCTAGTTAGTTAAACACAAGTCATTA 57.008 29.630 0.00 0.00 40.83 1.90
284 285 8.095937 AGTTAGTTAAACACAAGTCATTAGGC 57.904 34.615 0.00 0.00 40.83 3.93
285 286 7.717875 AGTTAGTTAAACACAAGTCATTAGGCA 59.282 33.333 0.00 0.00 40.83 4.75
286 287 8.512138 GTTAGTTAAACACAAGTCATTAGGCAT 58.488 33.333 0.00 0.00 38.05 4.40
287 288 6.913170 AGTTAAACACAAGTCATTAGGCATG 58.087 36.000 0.00 0.00 0.00 4.06
288 289 6.490040 AGTTAAACACAAGTCATTAGGCATGT 59.510 34.615 0.00 0.00 34.06 3.21
289 290 5.789643 AAACACAAGTCATTAGGCATGTT 57.210 34.783 0.00 0.00 34.06 2.71
290 291 5.789643 AACACAAGTCATTAGGCATGTTT 57.210 34.783 0.00 0.00 34.06 2.83
291 292 5.125100 ACACAAGTCATTAGGCATGTTTG 57.875 39.130 0.00 0.00 35.97 2.93
292 293 4.826733 ACACAAGTCATTAGGCATGTTTGA 59.173 37.500 0.00 0.00 34.92 2.69
293 294 5.156355 CACAAGTCATTAGGCATGTTTGAC 58.844 41.667 0.00 1.50 37.54 3.18
294 295 4.826733 ACAAGTCATTAGGCATGTTTGACA 59.173 37.500 11.10 0.00 39.27 3.58
295 296 5.048504 ACAAGTCATTAGGCATGTTTGACAG 60.049 40.000 11.10 6.87 39.27 3.51
296 297 3.441572 AGTCATTAGGCATGTTTGACAGC 59.558 43.478 11.10 0.00 39.27 4.40
297 298 3.191162 GTCATTAGGCATGTTTGACAGCA 59.809 43.478 0.00 0.00 37.30 4.41
298 299 3.441222 TCATTAGGCATGTTTGACAGCAG 59.559 43.478 0.00 0.00 34.06 4.24
299 300 1.825090 TAGGCATGTTTGACAGCAGG 58.175 50.000 0.00 0.00 30.96 4.85
300 301 0.896940 AGGCATGTTTGACAGCAGGG 60.897 55.000 0.00 0.00 30.96 4.45
301 302 1.080298 GCATGTTTGACAGCAGGGC 60.080 57.895 0.00 0.00 0.00 5.19
302 303 1.808531 GCATGTTTGACAGCAGGGCA 61.809 55.000 0.00 0.00 0.00 5.36
303 304 0.675083 CATGTTTGACAGCAGGGCAA 59.325 50.000 0.00 0.00 0.00 4.52
304 305 0.963962 ATGTTTGACAGCAGGGCAAG 59.036 50.000 0.00 0.00 0.00 4.01
305 306 0.106769 TGTTTGACAGCAGGGCAAGA 60.107 50.000 0.00 0.00 0.00 3.02
306 307 1.032014 GTTTGACAGCAGGGCAAGAA 58.968 50.000 0.00 0.00 0.00 2.52
307 308 1.000938 GTTTGACAGCAGGGCAAGAAG 60.001 52.381 0.00 0.00 0.00 2.85
308 309 0.183492 TTGACAGCAGGGCAAGAAGT 59.817 50.000 0.00 0.00 0.00 3.01
309 310 0.535780 TGACAGCAGGGCAAGAAGTG 60.536 55.000 0.00 0.00 0.00 3.16
310 311 0.536006 GACAGCAGGGCAAGAAGTGT 60.536 55.000 0.00 0.00 0.00 3.55
311 312 0.820891 ACAGCAGGGCAAGAAGTGTG 60.821 55.000 0.00 0.00 0.00 3.82
312 313 1.900498 AGCAGGGCAAGAAGTGTGC 60.900 57.895 0.00 0.00 41.45 4.57
313 314 2.949106 CAGGGCAAGAAGTGTGCG 59.051 61.111 0.00 0.00 43.18 5.34
314 315 1.893808 CAGGGCAAGAAGTGTGCGT 60.894 57.895 0.00 0.00 43.18 5.24
315 316 0.602638 CAGGGCAAGAAGTGTGCGTA 60.603 55.000 0.00 0.00 43.18 4.42
316 317 0.602905 AGGGCAAGAAGTGTGCGTAC 60.603 55.000 0.00 0.00 43.18 3.67
317 318 0.882927 GGGCAAGAAGTGTGCGTACA 60.883 55.000 0.82 0.82 43.18 2.90
318 319 0.941542 GGCAAGAAGTGTGCGTACAA 59.058 50.000 8.25 0.00 43.18 2.41
319 320 1.069906 GGCAAGAAGTGTGCGTACAAG 60.070 52.381 8.25 0.00 43.18 3.16
320 321 1.864711 GCAAGAAGTGTGCGTACAAGA 59.135 47.619 8.25 0.00 38.82 3.02
321 322 2.348591 GCAAGAAGTGTGCGTACAAGAC 60.349 50.000 8.25 2.59 38.82 3.01
322 323 2.863740 CAAGAAGTGTGCGTACAAGACA 59.136 45.455 8.25 0.00 38.82 3.41
323 324 3.173668 AGAAGTGTGCGTACAAGACAA 57.826 42.857 8.25 0.00 38.82 3.18
324 325 3.123804 AGAAGTGTGCGTACAAGACAAG 58.876 45.455 8.25 0.00 38.82 3.16
325 326 2.596904 AGTGTGCGTACAAGACAAGT 57.403 45.000 8.25 0.00 38.82 3.16
326 327 3.720949 AGTGTGCGTACAAGACAAGTA 57.279 42.857 8.25 0.00 38.82 2.24
327 328 3.639538 AGTGTGCGTACAAGACAAGTAG 58.360 45.455 8.25 0.00 38.82 2.57
328 329 3.317149 AGTGTGCGTACAAGACAAGTAGA 59.683 43.478 8.25 0.00 38.82 2.59
329 330 4.046462 GTGTGCGTACAAGACAAGTAGAA 58.954 43.478 8.25 0.00 38.82 2.10
330 331 4.046462 TGTGCGTACAAGACAAGTAGAAC 58.954 43.478 3.02 0.00 32.88 3.01
331 332 4.046462 GTGCGTACAAGACAAGTAGAACA 58.954 43.478 0.00 0.00 0.00 3.18
332 333 4.148348 GTGCGTACAAGACAAGTAGAACAG 59.852 45.833 0.00 0.00 0.00 3.16
333 334 4.202080 TGCGTACAAGACAAGTAGAACAGT 60.202 41.667 0.00 0.00 0.00 3.55
334 335 4.148348 GCGTACAAGACAAGTAGAACAGTG 59.852 45.833 0.00 0.00 0.00 3.66
335 336 4.680110 CGTACAAGACAAGTAGAACAGTGG 59.320 45.833 0.00 0.00 0.00 4.00
336 337 5.506815 CGTACAAGACAAGTAGAACAGTGGA 60.507 44.000 0.00 0.00 0.00 4.02
337 338 5.353394 ACAAGACAAGTAGAACAGTGGAA 57.647 39.130 0.00 0.00 0.00 3.53
338 339 5.741011 ACAAGACAAGTAGAACAGTGGAAA 58.259 37.500 0.00 0.00 0.00 3.13
339 340 5.817816 ACAAGACAAGTAGAACAGTGGAAAG 59.182 40.000 0.00 0.00 0.00 2.62
340 341 4.962155 AGACAAGTAGAACAGTGGAAAGG 58.038 43.478 0.00 0.00 0.00 3.11
341 342 4.409247 AGACAAGTAGAACAGTGGAAAGGT 59.591 41.667 0.00 0.00 0.00 3.50
342 343 4.704965 ACAAGTAGAACAGTGGAAAGGTC 58.295 43.478 0.00 0.00 0.00 3.85
343 344 4.409247 ACAAGTAGAACAGTGGAAAGGTCT 59.591 41.667 0.00 0.00 0.00 3.85
344 345 5.104485 ACAAGTAGAACAGTGGAAAGGTCTT 60.104 40.000 0.00 0.00 0.00 3.01
345 346 5.632034 AGTAGAACAGTGGAAAGGTCTTT 57.368 39.130 0.00 0.00 35.14 2.52
346 347 6.742559 AGTAGAACAGTGGAAAGGTCTTTA 57.257 37.500 0.00 0.00 32.11 1.85
347 348 7.133133 AGTAGAACAGTGGAAAGGTCTTTAA 57.867 36.000 0.00 0.00 32.11 1.52
348 349 6.990939 AGTAGAACAGTGGAAAGGTCTTTAAC 59.009 38.462 0.00 0.00 32.11 2.01
349 350 6.002653 AGAACAGTGGAAAGGTCTTTAACT 57.997 37.500 0.00 1.60 32.83 2.24
350 351 5.823045 AGAACAGTGGAAAGGTCTTTAACTG 59.177 40.000 23.18 23.18 44.48 3.16
351 352 4.461198 ACAGTGGAAAGGTCTTTAACTGG 58.539 43.478 25.71 16.14 43.90 4.00
352 353 3.821033 CAGTGGAAAGGTCTTTAACTGGG 59.179 47.826 20.11 6.42 40.26 4.45
353 354 3.720002 AGTGGAAAGGTCTTTAACTGGGA 59.280 43.478 9.23 0.00 31.99 4.37
354 355 4.167307 AGTGGAAAGGTCTTTAACTGGGAA 59.833 41.667 9.23 0.00 31.99 3.97
355 356 4.277672 GTGGAAAGGTCTTTAACTGGGAAC 59.722 45.833 0.00 0.00 32.11 3.62
356 357 3.501062 GGAAAGGTCTTTAACTGGGAACG 59.499 47.826 0.00 0.00 32.11 3.95
357 358 2.853235 AGGTCTTTAACTGGGAACGG 57.147 50.000 0.00 0.00 44.60 4.44
358 359 4.985309 GAAAGGTCTTTAACTGGGAACGGT 60.985 45.833 0.00 0.00 41.95 4.83
359 360 6.764276 GAAAGGTCTTTAACTGGGAACGGTC 61.764 48.000 0.00 0.00 40.28 4.79
365 366 3.423154 CTGGGAACGGTCAAGCGC 61.423 66.667 1.31 0.00 0.00 5.92
366 367 4.243008 TGGGAACGGTCAAGCGCA 62.243 61.111 11.47 0.00 0.00 6.09
367 368 3.723348 GGGAACGGTCAAGCGCAC 61.723 66.667 11.47 0.00 0.00 5.34
368 369 2.970324 GGAACGGTCAAGCGCACA 60.970 61.111 11.47 0.00 0.00 4.57
369 370 2.248431 GAACGGTCAAGCGCACAC 59.752 61.111 11.47 1.93 0.00 3.82
370 371 3.558282 GAACGGTCAAGCGCACACG 62.558 63.158 11.47 9.36 44.07 4.49
381 382 2.516930 GCACACGCTGCCCCATAT 60.517 61.111 0.00 0.00 40.42 1.78
382 383 2.837883 GCACACGCTGCCCCATATG 61.838 63.158 0.00 0.00 40.42 1.78
383 384 2.188829 CACACGCTGCCCCATATGG 61.189 63.158 15.41 15.41 0.00 2.74
399 400 2.463441 TGGCAAGCCAACCTACTCT 58.537 52.632 12.11 0.00 44.12 3.24
400 401 1.651737 TGGCAAGCCAACCTACTCTA 58.348 50.000 12.11 0.00 44.12 2.43
401 402 1.982226 TGGCAAGCCAACCTACTCTAA 59.018 47.619 12.11 0.00 44.12 2.10
402 403 2.576191 TGGCAAGCCAACCTACTCTAAT 59.424 45.455 12.11 0.00 44.12 1.73
403 404 3.206964 GGCAAGCCAACCTACTCTAATC 58.793 50.000 6.14 0.00 35.81 1.75
404 405 3.370527 GGCAAGCCAACCTACTCTAATCA 60.371 47.826 6.14 0.00 35.81 2.57
405 406 4.455606 GCAAGCCAACCTACTCTAATCAT 58.544 43.478 0.00 0.00 0.00 2.45
406 407 4.274459 GCAAGCCAACCTACTCTAATCATG 59.726 45.833 0.00 0.00 0.00 3.07
407 408 4.078639 AGCCAACCTACTCTAATCATGC 57.921 45.455 0.00 0.00 0.00 4.06
408 409 2.802816 GCCAACCTACTCTAATCATGCG 59.197 50.000 0.00 0.00 0.00 4.73
409 410 3.492656 GCCAACCTACTCTAATCATGCGA 60.493 47.826 0.00 0.00 0.00 5.10
410 411 4.302455 CCAACCTACTCTAATCATGCGAG 58.698 47.826 0.00 0.00 0.00 5.03
411 412 3.651803 ACCTACTCTAATCATGCGAGC 57.348 47.619 0.00 0.00 0.00 5.03
412 413 2.030717 ACCTACTCTAATCATGCGAGCG 60.031 50.000 0.00 0.00 0.00 5.03
413 414 2.030717 CCTACTCTAATCATGCGAGCGT 60.031 50.000 0.00 0.00 0.00 5.07
414 415 1.845266 ACTCTAATCATGCGAGCGTG 58.155 50.000 10.79 10.79 0.00 5.34
415 416 0.506080 CTCTAATCATGCGAGCGTGC 59.494 55.000 12.08 0.00 33.28 5.34
422 423 4.306471 TGCGAGCGTGCAAAACCG 62.306 61.111 3.30 0.00 43.02 4.44
425 426 3.660111 GAGCGTGCAAAACCGGCT 61.660 61.111 0.00 0.00 36.51 5.52
426 427 3.194272 GAGCGTGCAAAACCGGCTT 62.194 57.895 0.00 0.00 33.40 4.35
427 428 2.279186 GCGTGCAAAACCGGCTTT 60.279 55.556 0.00 0.00 0.00 3.51
428 429 1.880796 GCGTGCAAAACCGGCTTTT 60.881 52.632 0.00 5.08 31.77 2.27
429 430 0.595310 GCGTGCAAAACCGGCTTTTA 60.595 50.000 0.00 0.00 30.39 1.52
430 431 1.841450 CGTGCAAAACCGGCTTTTAA 58.159 45.000 0.00 0.00 30.39 1.52
431 432 1.519343 CGTGCAAAACCGGCTTTTAAC 59.481 47.619 0.00 8.77 30.39 2.01
432 433 2.796735 CGTGCAAAACCGGCTTTTAACT 60.797 45.455 0.00 0.00 30.39 2.24
433 434 3.191669 GTGCAAAACCGGCTTTTAACTT 58.808 40.909 0.00 0.00 30.39 2.66
434 435 3.244345 GTGCAAAACCGGCTTTTAACTTC 59.756 43.478 0.00 0.00 30.39 3.01
435 436 3.119101 TGCAAAACCGGCTTTTAACTTCA 60.119 39.130 0.00 0.19 30.39 3.02
436 437 4.055360 GCAAAACCGGCTTTTAACTTCAT 58.945 39.130 0.00 0.00 30.39 2.57
437 438 4.149922 GCAAAACCGGCTTTTAACTTCATC 59.850 41.667 0.00 0.00 30.39 2.92
438 439 5.285651 CAAAACCGGCTTTTAACTTCATCA 58.714 37.500 0.00 0.00 30.39 3.07
439 440 5.722021 AAACCGGCTTTTAACTTCATCAT 57.278 34.783 0.00 0.00 0.00 2.45
440 441 6.827586 AAACCGGCTTTTAACTTCATCATA 57.172 33.333 0.00 0.00 0.00 2.15
441 442 6.827586 AACCGGCTTTTAACTTCATCATAA 57.172 33.333 0.00 0.00 0.00 1.90
442 443 7.404671 AACCGGCTTTTAACTTCATCATAAT 57.595 32.000 0.00 0.00 0.00 1.28
443 444 7.027778 ACCGGCTTTTAACTTCATCATAATC 57.972 36.000 0.00 0.00 0.00 1.75
444 445 6.828785 ACCGGCTTTTAACTTCATCATAATCT 59.171 34.615 0.00 0.00 0.00 2.40
445 446 7.012421 ACCGGCTTTTAACTTCATCATAATCTC 59.988 37.037 0.00 0.00 0.00 2.75
446 447 7.065894 CGGCTTTTAACTTCATCATAATCTCG 58.934 38.462 0.00 0.00 0.00 4.04
447 448 6.853362 GGCTTTTAACTTCATCATAATCTCGC 59.147 38.462 0.00 0.00 0.00 5.03
448 449 7.409697 GCTTTTAACTTCATCATAATCTCGCA 58.590 34.615 0.00 0.00 0.00 5.10
449 450 8.072567 GCTTTTAACTTCATCATAATCTCGCAT 58.927 33.333 0.00 0.00 0.00 4.73
450 451 9.378597 CTTTTAACTTCATCATAATCTCGCATG 57.621 33.333 0.00 0.00 0.00 4.06
451 452 8.661352 TTTAACTTCATCATAATCTCGCATGA 57.339 30.769 0.00 0.00 35.72 3.07
452 453 8.661352 TTAACTTCATCATAATCTCGCATGAA 57.339 30.769 0.00 0.00 34.96 2.57
453 454 7.558161 AACTTCATCATAATCTCGCATGAAA 57.442 32.000 0.00 0.00 34.96 2.69
454 455 7.558161 ACTTCATCATAATCTCGCATGAAAA 57.442 32.000 0.00 0.00 34.96 2.29
455 456 8.162878 ACTTCATCATAATCTCGCATGAAAAT 57.837 30.769 0.00 0.00 34.96 1.82
456 457 8.074370 ACTTCATCATAATCTCGCATGAAAATG 58.926 33.333 0.00 0.00 34.96 2.32
457 458 6.376177 TCATCATAATCTCGCATGAAAATGC 58.624 36.000 0.00 0.53 43.72 3.56
458 459 6.206048 TCATCATAATCTCGCATGAAAATGCT 59.794 34.615 8.87 0.00 44.90 3.79
459 460 5.754778 TCATAATCTCGCATGAAAATGCTG 58.245 37.500 8.87 3.36 44.90 4.41
460 461 5.297527 TCATAATCTCGCATGAAAATGCTGT 59.702 36.000 8.87 0.00 44.90 4.40
461 462 3.687572 ATCTCGCATGAAAATGCTGTC 57.312 42.857 8.87 0.00 44.90 3.51
462 463 2.425539 TCTCGCATGAAAATGCTGTCA 58.574 42.857 8.87 0.00 44.90 3.58
463 464 2.813172 TCTCGCATGAAAATGCTGTCAA 59.187 40.909 8.87 0.00 44.90 3.18
464 465 3.120095 TCTCGCATGAAAATGCTGTCAAG 60.120 43.478 8.87 0.20 44.90 3.02
465 466 2.553602 TCGCATGAAAATGCTGTCAAGT 59.446 40.909 8.87 0.00 44.90 3.16
466 467 3.750652 TCGCATGAAAATGCTGTCAAGTA 59.249 39.130 8.87 0.00 44.90 2.24
467 468 4.093514 CGCATGAAAATGCTGTCAAGTAG 58.906 43.478 8.87 0.00 44.90 2.57
468 469 4.418392 GCATGAAAATGCTGTCAAGTAGG 58.582 43.478 0.00 0.00 43.79 3.18
469 470 4.156556 GCATGAAAATGCTGTCAAGTAGGA 59.843 41.667 0.00 0.00 43.79 2.94
470 471 5.675575 GCATGAAAATGCTGTCAAGTAGGAG 60.676 44.000 0.00 0.00 43.79 3.69
471 472 4.973168 TGAAAATGCTGTCAAGTAGGAGT 58.027 39.130 0.00 0.00 0.00 3.85
472 473 6.109156 TGAAAATGCTGTCAAGTAGGAGTA 57.891 37.500 0.00 0.00 0.00 2.59
473 474 6.530120 TGAAAATGCTGTCAAGTAGGAGTAA 58.470 36.000 0.00 0.00 0.00 2.24
474 475 7.168219 TGAAAATGCTGTCAAGTAGGAGTAAT 58.832 34.615 0.00 0.00 0.00 1.89
475 476 8.318412 TGAAAATGCTGTCAAGTAGGAGTAATA 58.682 33.333 0.00 0.00 0.00 0.98
476 477 8.723942 AAAATGCTGTCAAGTAGGAGTAATAG 57.276 34.615 0.00 0.00 0.00 1.73
477 478 7.425224 AATGCTGTCAAGTAGGAGTAATAGT 57.575 36.000 0.00 0.00 0.00 2.12
478 479 6.208988 TGCTGTCAAGTAGGAGTAATAGTG 57.791 41.667 0.00 0.00 0.00 2.74
479 480 5.127194 TGCTGTCAAGTAGGAGTAATAGTGG 59.873 44.000 0.00 0.00 0.00 4.00
480 481 5.593010 CTGTCAAGTAGGAGTAATAGTGGC 58.407 45.833 0.00 0.00 0.00 5.01
481 482 4.097437 TGTCAAGTAGGAGTAATAGTGGCG 59.903 45.833 0.00 0.00 0.00 5.69
482 483 3.635373 TCAAGTAGGAGTAATAGTGGCGG 59.365 47.826 0.00 0.00 0.00 6.13
483 484 1.962100 AGTAGGAGTAATAGTGGCGGC 59.038 52.381 0.00 0.00 0.00 6.53
484 485 1.684983 GTAGGAGTAATAGTGGCGGCA 59.315 52.381 7.97 7.97 0.00 5.69
485 486 0.753262 AGGAGTAATAGTGGCGGCAG 59.247 55.000 13.91 0.00 0.00 4.85
486 487 0.880718 GGAGTAATAGTGGCGGCAGC 60.881 60.000 13.91 7.75 44.18 5.25
512 513 2.414985 GCGTAAAGCGTACACAAATCG 58.585 47.619 0.00 0.00 43.66 3.34
520 521 2.645163 CGTACACAAATCGCAAAAGCA 58.355 42.857 0.00 0.00 0.00 3.91
521 522 2.651703 CGTACACAAATCGCAAAAGCAG 59.348 45.455 0.00 0.00 0.00 4.24
522 523 3.605922 CGTACACAAATCGCAAAAGCAGA 60.606 43.478 0.00 0.00 0.00 4.26
523 524 3.004024 ACACAAATCGCAAAAGCAGAG 57.996 42.857 0.00 0.00 0.00 3.35
524 525 2.618241 ACACAAATCGCAAAAGCAGAGA 59.382 40.909 0.00 0.00 0.00 3.10
525 526 2.975851 CACAAATCGCAAAAGCAGAGAC 59.024 45.455 0.00 0.00 0.00 3.36
526 527 2.236690 CAAATCGCAAAAGCAGAGACG 58.763 47.619 0.00 0.00 0.00 4.18
527 528 0.166814 AATCGCAAAAGCAGAGACGC 59.833 50.000 0.00 0.00 0.00 5.19
528 529 1.639298 ATCGCAAAAGCAGAGACGCC 61.639 55.000 0.00 0.00 0.00 5.68
529 530 2.320587 CGCAAAAGCAGAGACGCCT 61.321 57.895 0.00 0.00 0.00 5.52
530 531 1.499502 GCAAAAGCAGAGACGCCTC 59.500 57.895 0.00 0.00 39.72 4.70
531 532 1.784062 CAAAAGCAGAGACGCCTCG 59.216 57.895 0.00 0.00 44.08 4.63
532 533 2.029844 AAAAGCAGAGACGCCTCGC 61.030 57.895 7.30 7.30 44.08 5.03
544 545 3.197790 CCTCGCGGTTCCTGCATG 61.198 66.667 6.13 0.00 0.00 4.06
545 546 3.869272 CTCGCGGTTCCTGCATGC 61.869 66.667 11.82 11.82 0.00 4.06
548 549 4.120331 GCGGTTCCTGCATGCCAC 62.120 66.667 16.68 6.55 0.00 5.01
549 550 3.803082 CGGTTCCTGCATGCCACG 61.803 66.667 16.68 6.80 0.00 4.94
550 551 4.120331 GGTTCCTGCATGCCACGC 62.120 66.667 16.68 1.47 0.00 5.34
551 552 4.120331 GTTCCTGCATGCCACGCC 62.120 66.667 16.68 0.00 0.00 5.68
552 553 4.657408 TTCCTGCATGCCACGCCA 62.657 61.111 16.68 0.00 0.00 5.69
553 554 3.942377 TTCCTGCATGCCACGCCAT 62.942 57.895 16.68 0.00 0.00 4.40
554 555 4.201679 CCTGCATGCCACGCCATG 62.202 66.667 16.68 6.87 44.18 3.66
555 556 3.135457 CTGCATGCCACGCCATGA 61.135 61.111 16.68 0.00 44.12 3.07
556 557 3.405592 CTGCATGCCACGCCATGAC 62.406 63.158 16.68 6.97 44.12 3.06
557 558 3.442167 GCATGCCACGCCATGACA 61.442 61.111 6.36 0.00 44.12 3.58
558 559 2.777972 GCATGCCACGCCATGACAT 61.778 57.895 6.36 0.00 44.12 3.06
559 560 1.065109 CATGCCACGCCATGACATG 59.935 57.895 8.56 8.56 44.12 3.21
560 561 2.777972 ATGCCACGCCATGACATGC 61.778 57.895 10.10 5.01 0.00 4.06
561 562 3.136123 GCCACGCCATGACATGCT 61.136 61.111 10.10 0.00 0.00 3.79
562 563 2.795973 CCACGCCATGACATGCTG 59.204 61.111 10.10 6.74 0.00 4.41
563 564 1.746239 CCACGCCATGACATGCTGA 60.746 57.895 10.10 0.00 0.00 4.26
564 565 1.712018 CCACGCCATGACATGCTGAG 61.712 60.000 10.10 2.20 0.00 3.35
565 566 1.022982 CACGCCATGACATGCTGAGT 61.023 55.000 10.10 2.83 0.00 3.41
566 567 0.321919 ACGCCATGACATGCTGAGTT 60.322 50.000 10.10 0.00 0.00 3.01
567 568 0.806868 CGCCATGACATGCTGAGTTT 59.193 50.000 10.10 0.00 0.00 2.66
568 569 1.466866 CGCCATGACATGCTGAGTTTG 60.467 52.381 10.10 0.00 0.00 2.93
569 570 1.734707 GCCATGACATGCTGAGTTTGC 60.735 52.381 10.10 1.85 0.00 3.68
570 571 1.542472 CCATGACATGCTGAGTTTGCA 59.458 47.619 10.10 0.00 44.95 4.08
571 572 2.029739 CCATGACATGCTGAGTTTGCAA 60.030 45.455 10.10 0.00 44.01 4.08
572 573 3.242518 CATGACATGCTGAGTTTGCAAG 58.757 45.455 1.71 0.00 44.01 4.01
573 574 1.001048 TGACATGCTGAGTTTGCAAGC 60.001 47.619 4.95 4.95 44.01 4.01
574 575 1.001048 GACATGCTGAGTTTGCAAGCA 60.001 47.619 16.04 14.04 44.01 3.91
575 576 1.409790 ACATGCTGAGTTTGCAAGCAA 59.590 42.857 16.04 2.89 44.01 3.91
576 577 2.159071 ACATGCTGAGTTTGCAAGCAAA 60.159 40.909 15.59 15.59 44.01 3.68
577 578 2.212869 TGCTGAGTTTGCAAGCAAAG 57.787 45.000 19.47 12.51 45.16 2.77
578 579 1.202440 TGCTGAGTTTGCAAGCAAAGG 60.202 47.619 19.47 11.40 45.16 3.11
579 580 1.067516 GCTGAGTTTGCAAGCAAAGGA 59.932 47.619 19.47 6.66 45.16 3.36
580 581 2.861360 GCTGAGTTTGCAAGCAAAGGAG 60.861 50.000 19.47 15.35 45.16 3.69
581 582 2.620115 CTGAGTTTGCAAGCAAAGGAGA 59.380 45.455 19.47 4.77 45.16 3.71
582 583 2.620115 TGAGTTTGCAAGCAAAGGAGAG 59.380 45.455 19.47 0.00 45.16 3.20
583 584 2.880890 GAGTTTGCAAGCAAAGGAGAGA 59.119 45.455 19.47 0.00 45.16 3.10
584 585 3.290710 AGTTTGCAAGCAAAGGAGAGAA 58.709 40.909 19.47 0.00 45.16 2.87
585 586 3.701040 AGTTTGCAAGCAAAGGAGAGAAA 59.299 39.130 19.47 0.00 45.16 2.52
586 587 4.343239 AGTTTGCAAGCAAAGGAGAGAAAT 59.657 37.500 19.47 0.00 45.16 2.17
587 588 4.942761 TTGCAAGCAAAGGAGAGAAATT 57.057 36.364 4.79 0.00 32.44 1.82
588 589 6.040842 AGTTTGCAAGCAAAGGAGAGAAATTA 59.959 34.615 19.47 0.00 45.16 1.40
589 590 5.376854 TGCAAGCAAAGGAGAGAAATTAC 57.623 39.130 0.00 0.00 0.00 1.89
590 591 4.826733 TGCAAGCAAAGGAGAGAAATTACA 59.173 37.500 0.00 0.00 0.00 2.41
591 592 5.157067 GCAAGCAAAGGAGAGAAATTACAC 58.843 41.667 0.00 0.00 0.00 2.90
592 593 5.703876 CAAGCAAAGGAGAGAAATTACACC 58.296 41.667 0.00 0.00 0.00 4.16
593 594 4.985538 AGCAAAGGAGAGAAATTACACCA 58.014 39.130 0.00 0.00 0.00 4.17
594 595 5.574188 AGCAAAGGAGAGAAATTACACCAT 58.426 37.500 0.00 0.00 0.00 3.55
595 596 5.649831 AGCAAAGGAGAGAAATTACACCATC 59.350 40.000 0.00 0.00 0.00 3.51
596 597 5.415701 GCAAAGGAGAGAAATTACACCATCA 59.584 40.000 0.00 0.00 0.00 3.07
597 598 6.071952 GCAAAGGAGAGAAATTACACCATCAA 60.072 38.462 0.00 0.00 0.00 2.57
598 599 7.533426 CAAAGGAGAGAAATTACACCATCAAG 58.467 38.462 0.00 0.00 0.00 3.02
599 600 6.380079 AGGAGAGAAATTACACCATCAAGT 57.620 37.500 0.00 0.00 0.00 3.16
600 601 6.176183 AGGAGAGAAATTACACCATCAAGTG 58.824 40.000 0.00 0.00 43.65 3.16
613 614 5.871396 CCATCAAGTGGTGGTAGTACTAT 57.129 43.478 5.75 0.00 43.44 2.12
614 615 5.601662 CCATCAAGTGGTGGTAGTACTATG 58.398 45.833 5.75 0.00 43.44 2.23
615 616 4.730949 TCAAGTGGTGGTAGTACTATGC 57.269 45.455 5.75 0.00 0.00 3.14
616 617 4.350245 TCAAGTGGTGGTAGTACTATGCT 58.650 43.478 5.75 0.00 0.00 3.79
617 618 5.512298 TCAAGTGGTGGTAGTACTATGCTA 58.488 41.667 5.75 0.00 0.00 3.49
618 619 5.953548 TCAAGTGGTGGTAGTACTATGCTAA 59.046 40.000 5.75 0.00 0.00 3.09
619 620 6.610020 TCAAGTGGTGGTAGTACTATGCTAAT 59.390 38.462 5.75 0.00 0.00 1.73
620 621 7.125204 TCAAGTGGTGGTAGTACTATGCTAATT 59.875 37.037 5.75 1.04 0.00 1.40
666 667 2.223735 TGATGAATAGTCTCCGCGGTTC 60.224 50.000 27.15 20.07 0.00 3.62
668 669 1.134367 TGAATAGTCTCCGCGGTTCAG 59.866 52.381 27.15 15.99 0.00 3.02
780 785 1.519246 CGCAAGCATCCTCTCCTCA 59.481 57.895 0.00 0.00 0.00 3.86
855 923 3.917760 CCCAGCGTCCTCCGGATC 61.918 72.222 3.57 0.00 36.94 3.36
856 924 4.271816 CCAGCGTCCTCCGGATCG 62.272 72.222 3.57 11.96 36.94 3.69
857 925 4.933064 CAGCGTCCTCCGGATCGC 62.933 72.222 28.61 28.61 45.29 4.58
878 946 4.951963 CGCCCCTCTCCGAATCGC 62.952 72.222 0.00 0.00 0.00 4.58
934 1023 4.388499 ATCGCCACCTTCGCCGTT 62.388 61.111 0.00 0.00 0.00 4.44
1156 1260 1.608336 ATGGAGTTCGACCCCGTCA 60.608 57.895 0.00 0.00 37.05 4.35
1357 1849 5.640189 AGATTGTGCCTTGAATCTTGAAG 57.360 39.130 0.00 0.00 35.78 3.02
1589 2081 2.511600 GCCTTCGACCCGACATGG 60.512 66.667 0.00 0.00 34.89 3.66
1803 2295 1.348696 AGAACCCCGATTTGTACCGTT 59.651 47.619 0.00 0.00 0.00 4.44
2121 6176 1.663695 ATGGGCGGAACTAATTGTCG 58.336 50.000 0.00 0.00 0.00 4.35
2445 6522 5.182760 AGTGCTTGAGCCTAGAAAATCAAAG 59.817 40.000 0.00 0.00 41.18 2.77
2541 6618 4.942761 AATTTTGATGTGCTCACCTGTT 57.057 36.364 0.00 0.00 32.17 3.16
2897 7511 9.581289 TTTCATCCCTGTATTTCTAAGAAAACA 57.419 29.630 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.926561 TGCATGTGTATCTCGCAGTC 58.073 50.000 0.00 0.00 40.02 3.51
30 31 2.207590 CATGCATGTGTATCTCGCAGT 58.792 47.619 18.91 0.00 40.02 4.40
31 32 1.070108 GCATGCATGTGTATCTCGCAG 60.070 52.381 26.79 0.00 40.02 5.18
32 33 0.939419 GCATGCATGTGTATCTCGCA 59.061 50.000 26.79 0.00 40.97 5.10
33 34 1.070108 CAGCATGCATGTGTATCTCGC 60.070 52.381 26.79 9.98 0.00 5.03
34 35 2.943843 CAGCATGCATGTGTATCTCG 57.056 50.000 26.79 7.26 0.00 4.04
47 48 2.353889 AGCGAAATAAGTGAGCAGCATG 59.646 45.455 0.00 0.00 40.87 4.06
48 49 2.611292 GAGCGAAATAAGTGAGCAGCAT 59.389 45.455 0.00 0.00 0.00 3.79
49 50 2.002586 GAGCGAAATAAGTGAGCAGCA 58.997 47.619 0.00 0.00 0.00 4.41
50 51 2.030213 CAGAGCGAAATAAGTGAGCAGC 59.970 50.000 0.00 0.00 0.00 5.25
51 52 2.030213 GCAGAGCGAAATAAGTGAGCAG 59.970 50.000 0.00 0.00 0.00 4.24
52 53 2.002586 GCAGAGCGAAATAAGTGAGCA 58.997 47.619 0.00 0.00 0.00 4.26
53 54 2.275318 AGCAGAGCGAAATAAGTGAGC 58.725 47.619 0.00 0.00 0.00 4.26
54 55 3.551082 CAGAGCAGAGCGAAATAAGTGAG 59.449 47.826 0.00 0.00 0.00 3.51
55 56 3.515630 CAGAGCAGAGCGAAATAAGTGA 58.484 45.455 0.00 0.00 0.00 3.41
56 57 2.030213 GCAGAGCAGAGCGAAATAAGTG 59.970 50.000 0.00 0.00 0.00 3.16
57 58 2.093764 AGCAGAGCAGAGCGAAATAAGT 60.094 45.455 0.00 0.00 35.48 2.24
58 59 2.548875 AGCAGAGCAGAGCGAAATAAG 58.451 47.619 0.00 0.00 35.48 1.73
59 60 2.680312 AGCAGAGCAGAGCGAAATAA 57.320 45.000 0.00 0.00 35.48 1.40
60 61 2.544685 GAAGCAGAGCAGAGCGAAATA 58.455 47.619 0.00 0.00 35.48 1.40
61 62 1.367659 GAAGCAGAGCAGAGCGAAAT 58.632 50.000 0.00 0.00 35.48 2.17
62 63 0.671781 GGAAGCAGAGCAGAGCGAAA 60.672 55.000 0.00 0.00 35.48 3.46
63 64 1.079543 GGAAGCAGAGCAGAGCGAA 60.080 57.895 0.00 0.00 35.48 4.70
64 65 1.943116 GAGGAAGCAGAGCAGAGCGA 61.943 60.000 0.00 0.00 35.48 4.93
65 66 1.519013 GAGGAAGCAGAGCAGAGCG 60.519 63.158 0.00 0.00 35.48 5.03
66 67 0.460635 CTGAGGAAGCAGAGCAGAGC 60.461 60.000 0.00 0.00 38.14 4.09
67 68 3.744941 CTGAGGAAGCAGAGCAGAG 57.255 57.895 0.00 0.00 38.14 3.35
83 84 2.100418 TGAAGGATCGTCAGAGATGCTG 59.900 50.000 1.94 0.00 46.35 4.41
85 86 2.879002 TGAAGGATCGTCAGAGATGC 57.121 50.000 0.00 0.00 38.95 3.91
86 87 6.073873 GCTTAATTGAAGGATCGTCAGAGATG 60.074 42.308 0.00 0.00 35.49 2.90
87 88 5.988561 GCTTAATTGAAGGATCGTCAGAGAT 59.011 40.000 0.00 0.00 35.49 2.75
88 89 5.127845 AGCTTAATTGAAGGATCGTCAGAGA 59.872 40.000 0.00 0.00 35.49 3.10
89 90 5.233902 CAGCTTAATTGAAGGATCGTCAGAG 59.766 44.000 0.00 0.00 35.49 3.35
90 91 5.111989 CAGCTTAATTGAAGGATCGTCAGA 58.888 41.667 0.00 0.00 35.49 3.27
91 92 4.872691 ACAGCTTAATTGAAGGATCGTCAG 59.127 41.667 0.00 0.00 35.49 3.51
92 93 4.631377 CACAGCTTAATTGAAGGATCGTCA 59.369 41.667 0.00 0.00 35.49 4.35
93 94 4.870426 TCACAGCTTAATTGAAGGATCGTC 59.130 41.667 0.00 0.00 35.49 4.20
94 95 4.832248 TCACAGCTTAATTGAAGGATCGT 58.168 39.130 0.00 0.00 35.49 3.73
95 96 4.872691 ACTCACAGCTTAATTGAAGGATCG 59.127 41.667 0.00 0.00 35.49 3.69
96 97 6.112058 AGACTCACAGCTTAATTGAAGGATC 58.888 40.000 0.00 0.00 35.49 3.36
97 98 6.059787 AGACTCACAGCTTAATTGAAGGAT 57.940 37.500 0.00 0.00 35.49 3.24
98 99 5.482908 GAGACTCACAGCTTAATTGAAGGA 58.517 41.667 0.00 0.00 35.49 3.36
99 100 4.633565 GGAGACTCACAGCTTAATTGAAGG 59.366 45.833 4.53 0.00 35.49 3.46
100 101 4.633565 GGGAGACTCACAGCTTAATTGAAG 59.366 45.833 4.53 0.00 38.30 3.02
101 102 4.579869 GGGAGACTCACAGCTTAATTGAA 58.420 43.478 4.53 0.00 0.00 2.69
102 103 3.368427 CGGGAGACTCACAGCTTAATTGA 60.368 47.826 5.38 0.00 0.00 2.57
103 104 2.932614 CGGGAGACTCACAGCTTAATTG 59.067 50.000 5.38 0.00 0.00 2.32
104 105 2.678190 GCGGGAGACTCACAGCTTAATT 60.678 50.000 5.38 0.00 0.00 1.40
105 106 1.134670 GCGGGAGACTCACAGCTTAAT 60.135 52.381 5.38 0.00 0.00 1.40
106 107 0.246635 GCGGGAGACTCACAGCTTAA 59.753 55.000 5.38 0.00 0.00 1.85
107 108 0.898326 TGCGGGAGACTCACAGCTTA 60.898 55.000 18.06 1.75 0.00 3.09
108 109 1.758440 TTGCGGGAGACTCACAGCTT 61.758 55.000 18.06 0.00 0.00 3.74
109 110 1.758440 TTTGCGGGAGACTCACAGCT 61.758 55.000 18.06 0.00 0.00 4.24
110 111 0.884704 TTTTGCGGGAGACTCACAGC 60.885 55.000 5.38 9.76 0.00 4.40
111 112 1.593196 TTTTTGCGGGAGACTCACAG 58.407 50.000 5.38 0.00 0.00 3.66
112 113 3.790691 TTTTTGCGGGAGACTCACA 57.209 47.368 5.38 0.00 0.00 3.58
137 138 6.313905 CAGTTAGTCACAGACTCACAGTTTTT 59.686 38.462 12.41 0.00 42.40 1.94
138 139 5.812642 CAGTTAGTCACAGACTCACAGTTTT 59.187 40.000 12.41 0.00 42.40 2.43
139 140 5.127194 TCAGTTAGTCACAGACTCACAGTTT 59.873 40.000 12.41 0.00 42.40 2.66
140 141 4.645136 TCAGTTAGTCACAGACTCACAGTT 59.355 41.667 12.41 0.00 42.40 3.16
141 142 4.036971 GTCAGTTAGTCACAGACTCACAGT 59.963 45.833 12.41 0.00 42.40 3.55
142 143 4.277174 AGTCAGTTAGTCACAGACTCACAG 59.723 45.833 12.41 6.06 46.56 3.66
143 144 4.207955 AGTCAGTTAGTCACAGACTCACA 58.792 43.478 12.41 0.00 46.56 3.58
144 145 4.839668 AGTCAGTTAGTCACAGACTCAC 57.160 45.455 2.48 3.27 46.56 3.51
145 146 7.166167 TGTATAGTCAGTTAGTCACAGACTCA 58.834 38.462 5.85 0.00 46.56 3.41
146 147 7.612668 TGTATAGTCAGTTAGTCACAGACTC 57.387 40.000 5.85 0.00 46.56 3.36
148 149 8.215926 AGATGTATAGTCAGTTAGTCACAGAC 57.784 38.462 0.00 0.00 41.25 3.51
149 150 8.809468 AAGATGTATAGTCAGTTAGTCACAGA 57.191 34.615 0.00 0.00 0.00 3.41
150 151 9.862371 AAAAGATGTATAGTCAGTTAGTCACAG 57.138 33.333 0.00 0.00 0.00 3.66
151 152 9.639601 CAAAAGATGTATAGTCAGTTAGTCACA 57.360 33.333 0.00 0.00 0.00 3.58
152 153 9.640963 ACAAAAGATGTATAGTCAGTTAGTCAC 57.359 33.333 0.00 0.00 41.63 3.67
188 189 9.320295 ACCCAGAATAATTACAAATCTTTGGAA 57.680 29.630 2.93 2.93 44.46 3.53
189 190 8.893563 ACCCAGAATAATTACAAATCTTTGGA 57.106 30.769 7.51 0.00 42.34 3.53
190 191 9.369904 CAACCCAGAATAATTACAAATCTTTGG 57.630 33.333 7.51 0.00 42.34 3.28
191 192 8.872845 GCAACCCAGAATAATTACAAATCTTTG 58.127 33.333 1.19 1.19 43.62 2.77
192 193 8.040727 GGCAACCCAGAATAATTACAAATCTTT 58.959 33.333 0.00 0.00 0.00 2.52
193 194 7.555965 GGCAACCCAGAATAATTACAAATCTT 58.444 34.615 0.00 0.00 0.00 2.40
194 195 7.112452 GGCAACCCAGAATAATTACAAATCT 57.888 36.000 0.00 0.00 0.00 2.40
213 214 3.075148 GTTCTCTAGGAAACAGGGCAAC 58.925 50.000 0.00 0.00 35.51 4.17
214 215 2.708861 TGTTCTCTAGGAAACAGGGCAA 59.291 45.455 6.72 0.00 35.51 4.52
215 216 2.334977 TGTTCTCTAGGAAACAGGGCA 58.665 47.619 6.72 0.00 35.51 5.36
216 217 3.636153 ATGTTCTCTAGGAAACAGGGC 57.364 47.619 13.74 0.00 35.51 5.19
217 218 5.675538 CCTAATGTTCTCTAGGAAACAGGG 58.324 45.833 13.74 11.76 37.47 4.45
218 219 5.119694 GCCTAATGTTCTCTAGGAAACAGG 58.880 45.833 13.74 11.20 37.47 4.00
219 220 5.104735 AGGCCTAATGTTCTCTAGGAAACAG 60.105 44.000 1.29 4.76 37.47 3.16
220 221 4.783227 AGGCCTAATGTTCTCTAGGAAACA 59.217 41.667 1.29 11.59 37.47 2.83
221 222 5.360649 AGGCCTAATGTTCTCTAGGAAAC 57.639 43.478 1.29 0.00 37.47 2.78
222 223 8.648693 GTTATAGGCCTAATGTTCTCTAGGAAA 58.351 37.037 18.42 0.00 37.47 3.13
223 224 7.787904 TGTTATAGGCCTAATGTTCTCTAGGAA 59.212 37.037 18.42 0.00 37.47 3.36
224 225 7.302948 TGTTATAGGCCTAATGTTCTCTAGGA 58.697 38.462 18.42 0.00 37.47 2.94
225 226 7.540474 TGTTATAGGCCTAATGTTCTCTAGG 57.460 40.000 18.42 0.00 38.20 3.02
252 253 9.991906 TGACTTGTGTTTAACTAACTAGCTAAT 57.008 29.630 0.00 0.00 37.64 1.73
253 254 9.991906 ATGACTTGTGTTTAACTAACTAGCTAA 57.008 29.630 0.00 0.00 37.64 3.09
254 255 9.991906 AATGACTTGTGTTTAACTAACTAGCTA 57.008 29.630 0.00 0.00 37.64 3.32
255 256 8.904099 AATGACTTGTGTTTAACTAACTAGCT 57.096 30.769 0.00 0.00 37.64 3.32
258 259 9.211485 GCCTAATGACTTGTGTTTAACTAACTA 57.789 33.333 0.00 0.00 37.64 2.24
259 260 7.717875 TGCCTAATGACTTGTGTTTAACTAACT 59.282 33.333 0.00 0.00 37.64 2.24
260 261 7.867752 TGCCTAATGACTTGTGTTTAACTAAC 58.132 34.615 0.00 0.00 37.26 2.34
261 262 8.511321 CATGCCTAATGACTTGTGTTTAACTAA 58.489 33.333 0.00 0.00 38.72 2.24
262 263 7.663905 ACATGCCTAATGACTTGTGTTTAACTA 59.336 33.333 0.00 0.00 38.72 2.24
263 264 6.490040 ACATGCCTAATGACTTGTGTTTAACT 59.510 34.615 0.00 0.00 38.72 2.24
264 265 6.677913 ACATGCCTAATGACTTGTGTTTAAC 58.322 36.000 0.00 0.00 38.72 2.01
265 266 6.892658 ACATGCCTAATGACTTGTGTTTAA 57.107 33.333 0.00 0.00 38.72 1.52
266 267 6.892658 AACATGCCTAATGACTTGTGTTTA 57.107 33.333 0.00 0.00 38.72 2.01
267 268 5.789643 AACATGCCTAATGACTTGTGTTT 57.210 34.783 0.00 0.00 38.72 2.83
268 269 5.301551 TCAAACATGCCTAATGACTTGTGTT 59.698 36.000 0.00 0.00 38.72 3.32
269 270 4.826733 TCAAACATGCCTAATGACTTGTGT 59.173 37.500 0.00 0.00 38.72 3.72
270 271 5.156355 GTCAAACATGCCTAATGACTTGTG 58.844 41.667 0.00 0.00 38.72 3.33
271 272 4.826733 TGTCAAACATGCCTAATGACTTGT 59.173 37.500 14.14 0.00 40.70 3.16
272 273 5.375417 TGTCAAACATGCCTAATGACTTG 57.625 39.130 14.14 3.45 40.70 3.16
273 274 4.082571 GCTGTCAAACATGCCTAATGACTT 60.083 41.667 14.14 0.00 40.70 3.01
274 275 3.441572 GCTGTCAAACATGCCTAATGACT 59.558 43.478 14.14 0.00 40.70 3.41
275 276 3.191162 TGCTGTCAAACATGCCTAATGAC 59.809 43.478 0.00 1.46 38.72 3.06
276 277 3.419943 TGCTGTCAAACATGCCTAATGA 58.580 40.909 0.00 0.00 38.72 2.57
277 278 3.428452 CCTGCTGTCAAACATGCCTAATG 60.428 47.826 0.00 0.00 42.48 1.90
278 279 2.756760 CCTGCTGTCAAACATGCCTAAT 59.243 45.455 0.00 0.00 0.00 1.73
279 280 2.161855 CCTGCTGTCAAACATGCCTAA 58.838 47.619 0.00 0.00 0.00 2.69
280 281 1.614051 CCCTGCTGTCAAACATGCCTA 60.614 52.381 0.00 0.00 0.00 3.93
281 282 0.896940 CCCTGCTGTCAAACATGCCT 60.897 55.000 0.00 0.00 0.00 4.75
282 283 1.588082 CCCTGCTGTCAAACATGCC 59.412 57.895 0.00 0.00 0.00 4.40
283 284 1.080298 GCCCTGCTGTCAAACATGC 60.080 57.895 0.00 0.00 0.00 4.06
284 285 0.675083 TTGCCCTGCTGTCAAACATG 59.325 50.000 0.00 0.00 0.00 3.21
285 286 0.963962 CTTGCCCTGCTGTCAAACAT 59.036 50.000 0.00 0.00 0.00 2.71
286 287 0.106769 TCTTGCCCTGCTGTCAAACA 60.107 50.000 0.00 0.00 0.00 2.83
287 288 1.000938 CTTCTTGCCCTGCTGTCAAAC 60.001 52.381 0.00 0.00 0.00 2.93
288 289 1.321474 CTTCTTGCCCTGCTGTCAAA 58.679 50.000 0.00 0.00 0.00 2.69
289 290 0.183492 ACTTCTTGCCCTGCTGTCAA 59.817 50.000 0.00 0.00 0.00 3.18
290 291 0.535780 CACTTCTTGCCCTGCTGTCA 60.536 55.000 0.00 0.00 0.00 3.58
291 292 0.536006 ACACTTCTTGCCCTGCTGTC 60.536 55.000 0.00 0.00 0.00 3.51
292 293 0.820891 CACACTTCTTGCCCTGCTGT 60.821 55.000 0.00 0.00 0.00 4.40
293 294 1.954528 CACACTTCTTGCCCTGCTG 59.045 57.895 0.00 0.00 0.00 4.41
294 295 1.900498 GCACACTTCTTGCCCTGCT 60.900 57.895 0.00 0.00 33.58 4.24
295 296 2.647297 GCACACTTCTTGCCCTGC 59.353 61.111 0.00 0.00 33.58 4.85
296 297 0.602638 TACGCACACTTCTTGCCCTG 60.603 55.000 0.00 0.00 36.57 4.45
297 298 0.602905 GTACGCACACTTCTTGCCCT 60.603 55.000 0.00 0.00 36.57 5.19
298 299 0.882927 TGTACGCACACTTCTTGCCC 60.883 55.000 0.00 0.00 36.57 5.36
299 300 0.941542 TTGTACGCACACTTCTTGCC 59.058 50.000 0.00 0.00 36.57 4.52
300 301 1.864711 TCTTGTACGCACACTTCTTGC 59.135 47.619 0.00 0.00 33.30 4.01
301 302 2.863740 TGTCTTGTACGCACACTTCTTG 59.136 45.455 0.00 0.00 33.30 3.02
302 303 3.173668 TGTCTTGTACGCACACTTCTT 57.826 42.857 0.00 0.00 33.30 2.52
303 304 2.882927 TGTCTTGTACGCACACTTCT 57.117 45.000 0.00 0.00 33.30 2.85
304 305 2.864343 ACTTGTCTTGTACGCACACTTC 59.136 45.455 0.00 0.00 33.30 3.01
305 306 2.901249 ACTTGTCTTGTACGCACACTT 58.099 42.857 0.00 0.00 33.30 3.16
306 307 2.596904 ACTTGTCTTGTACGCACACT 57.403 45.000 0.00 0.00 33.30 3.55
307 308 3.635331 TCTACTTGTCTTGTACGCACAC 58.365 45.455 0.00 0.00 33.30 3.82
308 309 3.994204 TCTACTTGTCTTGTACGCACA 57.006 42.857 0.00 0.00 0.00 4.57
309 310 4.046462 TGTTCTACTTGTCTTGTACGCAC 58.954 43.478 0.00 0.00 0.00 5.34
310 311 4.202080 ACTGTTCTACTTGTCTTGTACGCA 60.202 41.667 0.00 0.00 0.00 5.24
311 312 4.148348 CACTGTTCTACTTGTCTTGTACGC 59.852 45.833 0.00 0.00 0.00 4.42
312 313 4.680110 CCACTGTTCTACTTGTCTTGTACG 59.320 45.833 0.00 0.00 0.00 3.67
313 314 5.839621 TCCACTGTTCTACTTGTCTTGTAC 58.160 41.667 0.00 0.00 0.00 2.90
314 315 6.474140 TTCCACTGTTCTACTTGTCTTGTA 57.526 37.500 0.00 0.00 0.00 2.41
315 316 5.353394 TTCCACTGTTCTACTTGTCTTGT 57.647 39.130 0.00 0.00 0.00 3.16
316 317 5.237344 CCTTTCCACTGTTCTACTTGTCTTG 59.763 44.000 0.00 0.00 0.00 3.02
317 318 5.104485 ACCTTTCCACTGTTCTACTTGTCTT 60.104 40.000 0.00 0.00 0.00 3.01
318 319 4.409247 ACCTTTCCACTGTTCTACTTGTCT 59.591 41.667 0.00 0.00 0.00 3.41
319 320 4.704965 ACCTTTCCACTGTTCTACTTGTC 58.295 43.478 0.00 0.00 0.00 3.18
320 321 4.409247 AGACCTTTCCACTGTTCTACTTGT 59.591 41.667 0.00 0.00 0.00 3.16
321 322 4.962155 AGACCTTTCCACTGTTCTACTTG 58.038 43.478 0.00 0.00 0.00 3.16
322 323 5.632034 AAGACCTTTCCACTGTTCTACTT 57.368 39.130 0.00 0.00 0.00 2.24
323 324 5.632034 AAAGACCTTTCCACTGTTCTACT 57.368 39.130 0.00 0.00 0.00 2.57
324 325 6.990939 AGTTAAAGACCTTTCCACTGTTCTAC 59.009 38.462 0.00 0.00 34.23 2.59
325 326 6.990349 CAGTTAAAGACCTTTCCACTGTTCTA 59.010 38.462 17.90 0.00 38.21 2.10
326 327 5.823045 CAGTTAAAGACCTTTCCACTGTTCT 59.177 40.000 17.90 0.00 38.21 3.01
327 328 5.008712 CCAGTTAAAGACCTTTCCACTGTTC 59.991 44.000 21.21 0.00 39.70 3.18
328 329 4.887655 CCAGTTAAAGACCTTTCCACTGTT 59.112 41.667 21.21 0.20 39.70 3.16
329 330 4.461198 CCAGTTAAAGACCTTTCCACTGT 58.539 43.478 21.21 0.00 39.70 3.55
330 331 3.821033 CCCAGTTAAAGACCTTTCCACTG 59.179 47.826 18.60 18.60 40.32 3.66
331 332 3.720002 TCCCAGTTAAAGACCTTTCCACT 59.280 43.478 0.00 0.75 34.23 4.00
332 333 4.094830 TCCCAGTTAAAGACCTTTCCAC 57.905 45.455 0.00 0.00 34.23 4.02
333 334 4.466827 GTTCCCAGTTAAAGACCTTTCCA 58.533 43.478 0.00 0.00 34.23 3.53
334 335 3.501062 CGTTCCCAGTTAAAGACCTTTCC 59.499 47.826 0.00 0.00 34.23 3.13
335 336 3.501062 CCGTTCCCAGTTAAAGACCTTTC 59.499 47.826 0.00 0.00 34.23 2.62
336 337 3.117776 ACCGTTCCCAGTTAAAGACCTTT 60.118 43.478 0.41 0.41 36.63 3.11
337 338 2.440627 ACCGTTCCCAGTTAAAGACCTT 59.559 45.455 0.00 0.00 0.00 3.50
338 339 2.038164 GACCGTTCCCAGTTAAAGACCT 59.962 50.000 0.00 0.00 0.00 3.85
339 340 2.224354 TGACCGTTCCCAGTTAAAGACC 60.224 50.000 0.00 0.00 0.00 3.85
340 341 3.116079 TGACCGTTCCCAGTTAAAGAC 57.884 47.619 0.00 0.00 0.00 3.01
341 342 3.735591 CTTGACCGTTCCCAGTTAAAGA 58.264 45.455 0.00 0.00 0.00 2.52
342 343 2.225727 GCTTGACCGTTCCCAGTTAAAG 59.774 50.000 0.00 0.00 0.00 1.85
343 344 2.223745 GCTTGACCGTTCCCAGTTAAA 58.776 47.619 0.00 0.00 0.00 1.52
344 345 1.874739 CGCTTGACCGTTCCCAGTTAA 60.875 52.381 0.00 0.00 0.00 2.01
345 346 0.320073 CGCTTGACCGTTCCCAGTTA 60.320 55.000 0.00 0.00 0.00 2.24
346 347 1.597027 CGCTTGACCGTTCCCAGTT 60.597 57.895 0.00 0.00 0.00 3.16
347 348 2.030562 CGCTTGACCGTTCCCAGT 59.969 61.111 0.00 0.00 0.00 4.00
348 349 3.423154 GCGCTTGACCGTTCCCAG 61.423 66.667 0.00 0.00 0.00 4.45
349 350 4.243008 TGCGCTTGACCGTTCCCA 62.243 61.111 9.73 0.00 0.00 4.37
350 351 3.723348 GTGCGCTTGACCGTTCCC 61.723 66.667 9.73 0.00 0.00 3.97
351 352 2.970324 TGTGCGCTTGACCGTTCC 60.970 61.111 9.73 0.00 0.00 3.62
352 353 2.248431 GTGTGCGCTTGACCGTTC 59.752 61.111 9.73 0.00 0.00 3.95
353 354 3.636043 CGTGTGCGCTTGACCGTT 61.636 61.111 9.73 0.00 0.00 4.44
365 366 2.188829 CCATATGGGGCAGCGTGTG 61.189 63.158 14.52 0.00 0.00 3.82
366 367 2.192979 CCATATGGGGCAGCGTGT 59.807 61.111 14.52 0.00 0.00 4.49
374 375 1.402107 GGTTGGCTTGCCATATGGGG 61.402 60.000 23.30 0.00 37.04 4.96
375 376 0.397535 AGGTTGGCTTGCCATATGGG 60.398 55.000 23.30 7.96 40.85 4.00
376 377 1.956477 GTAGGTTGGCTTGCCATATGG 59.044 52.381 18.07 18.07 38.53 2.74
377 378 2.880890 GAGTAGGTTGGCTTGCCATATG 59.119 50.000 15.58 0.00 0.00 1.78
378 379 2.780010 AGAGTAGGTTGGCTTGCCATAT 59.220 45.455 15.58 7.03 0.00 1.78
379 380 2.196595 AGAGTAGGTTGGCTTGCCATA 58.803 47.619 15.58 2.28 0.00 2.74
380 381 0.995024 AGAGTAGGTTGGCTTGCCAT 59.005 50.000 15.58 3.31 0.00 4.40
381 382 1.651737 TAGAGTAGGTTGGCTTGCCA 58.348 50.000 10.65 10.65 0.00 4.92
382 383 2.781681 TTAGAGTAGGTTGGCTTGCC 57.218 50.000 4.43 4.43 0.00 4.52
383 384 3.873910 TGATTAGAGTAGGTTGGCTTGC 58.126 45.455 0.00 0.00 0.00 4.01
384 385 4.274459 GCATGATTAGAGTAGGTTGGCTTG 59.726 45.833 0.00 0.00 0.00 4.01
385 386 4.455606 GCATGATTAGAGTAGGTTGGCTT 58.544 43.478 0.00 0.00 0.00 4.35
386 387 3.493350 CGCATGATTAGAGTAGGTTGGCT 60.493 47.826 0.00 0.00 0.00 4.75
387 388 2.802816 CGCATGATTAGAGTAGGTTGGC 59.197 50.000 0.00 0.00 0.00 4.52
388 389 4.302455 CTCGCATGATTAGAGTAGGTTGG 58.698 47.826 0.00 0.00 0.00 3.77
389 390 3.738282 GCTCGCATGATTAGAGTAGGTTG 59.262 47.826 0.00 0.00 34.69 3.77
390 391 3.551046 CGCTCGCATGATTAGAGTAGGTT 60.551 47.826 0.00 0.00 34.69 3.50
391 392 2.030717 CGCTCGCATGATTAGAGTAGGT 60.031 50.000 0.00 0.00 34.69 3.08
392 393 2.030717 ACGCTCGCATGATTAGAGTAGG 60.031 50.000 0.00 0.00 34.69 3.18
393 394 2.976509 CACGCTCGCATGATTAGAGTAG 59.023 50.000 0.00 1.33 34.69 2.57
394 395 2.858646 GCACGCTCGCATGATTAGAGTA 60.859 50.000 0.00 0.00 34.69 2.59
395 396 1.845266 CACGCTCGCATGATTAGAGT 58.155 50.000 0.00 0.00 34.69 3.24
396 397 0.506080 GCACGCTCGCATGATTAGAG 59.494 55.000 0.00 0.04 35.28 2.43
397 398 0.179113 TGCACGCTCGCATGATTAGA 60.179 50.000 0.00 0.00 36.86 2.10
398 399 0.652071 TTGCACGCTCGCATGATTAG 59.348 50.000 0.00 0.00 42.62 1.73
399 400 1.082690 TTTGCACGCTCGCATGATTA 58.917 45.000 0.00 0.00 42.62 1.75
400 401 0.240678 TTTTGCACGCTCGCATGATT 59.759 45.000 0.00 0.00 42.62 2.57
401 402 0.454957 GTTTTGCACGCTCGCATGAT 60.455 50.000 0.00 0.00 42.62 2.45
402 403 1.082169 GTTTTGCACGCTCGCATGA 60.082 52.632 0.00 0.00 42.62 3.07
403 404 2.082366 GGTTTTGCACGCTCGCATG 61.082 57.895 0.00 0.00 42.62 4.06
404 405 2.255252 GGTTTTGCACGCTCGCAT 59.745 55.556 0.00 0.00 42.62 4.73
405 406 4.306471 CGGTTTTGCACGCTCGCA 62.306 61.111 0.00 0.00 41.03 5.10
408 409 2.677573 AAAGCCGGTTTTGCACGCTC 62.678 55.000 16.13 0.00 0.00 5.03
409 410 2.291457 AAAAGCCGGTTTTGCACGCT 62.291 50.000 17.59 0.00 36.96 5.07
410 411 0.595310 TAAAAGCCGGTTTTGCACGC 60.595 50.000 17.59 0.00 38.85 5.34
411 412 1.519343 GTTAAAAGCCGGTTTTGCACG 59.481 47.619 17.59 0.00 38.85 5.34
412 413 2.816689 AGTTAAAAGCCGGTTTTGCAC 58.183 42.857 17.59 15.67 38.85 4.57
413 414 3.119101 TGAAGTTAAAAGCCGGTTTTGCA 60.119 39.130 17.59 5.67 38.85 4.08
414 415 3.449632 TGAAGTTAAAAGCCGGTTTTGC 58.550 40.909 17.59 10.51 38.85 3.68
415 416 5.285651 TGATGAAGTTAAAAGCCGGTTTTG 58.714 37.500 17.59 0.00 38.85 2.44
416 417 5.523438 TGATGAAGTTAAAAGCCGGTTTT 57.477 34.783 10.88 10.88 41.45 2.43
417 418 5.722021 ATGATGAAGTTAAAAGCCGGTTT 57.278 34.783 1.90 0.00 0.00 3.27
418 419 6.827586 TTATGATGAAGTTAAAAGCCGGTT 57.172 33.333 1.90 0.00 0.00 4.44
419 420 6.828785 AGATTATGATGAAGTTAAAAGCCGGT 59.171 34.615 1.90 0.00 0.00 5.28
420 421 7.264373 AGATTATGATGAAGTTAAAAGCCGG 57.736 36.000 0.00 0.00 0.00 6.13
421 422 7.065894 CGAGATTATGATGAAGTTAAAAGCCG 58.934 38.462 0.00 0.00 0.00 5.52
422 423 6.853362 GCGAGATTATGATGAAGTTAAAAGCC 59.147 38.462 0.00 0.00 0.00 4.35
423 424 7.409697 TGCGAGATTATGATGAAGTTAAAAGC 58.590 34.615 0.00 0.00 0.00 3.51
424 425 9.378597 CATGCGAGATTATGATGAAGTTAAAAG 57.621 33.333 0.00 0.00 0.00 2.27
425 426 9.108284 TCATGCGAGATTATGATGAAGTTAAAA 57.892 29.630 0.00 0.00 0.00 1.52
426 427 8.661352 TCATGCGAGATTATGATGAAGTTAAA 57.339 30.769 0.00 0.00 0.00 1.52
427 428 8.661352 TTCATGCGAGATTATGATGAAGTTAA 57.339 30.769 0.00 0.00 33.68 2.01
428 429 8.661352 TTTCATGCGAGATTATGATGAAGTTA 57.339 30.769 0.00 0.00 35.16 2.24
429 430 7.558161 TTTCATGCGAGATTATGATGAAGTT 57.442 32.000 0.00 0.00 35.16 2.66
430 431 7.558161 TTTTCATGCGAGATTATGATGAAGT 57.442 32.000 0.00 0.00 35.16 3.01
431 432 7.060748 GCATTTTCATGCGAGATTATGATGAAG 59.939 37.037 0.00 0.00 46.45 3.02
432 433 6.859508 GCATTTTCATGCGAGATTATGATGAA 59.140 34.615 0.00 0.00 46.45 2.57
433 434 6.376177 GCATTTTCATGCGAGATTATGATGA 58.624 36.000 0.00 0.00 46.45 2.92
434 435 6.612855 GCATTTTCATGCGAGATTATGATG 57.387 37.500 0.00 0.00 46.45 3.07
447 448 5.413833 ACTCCTACTTGACAGCATTTTCATG 59.586 40.000 0.00 0.00 0.00 3.07
448 449 5.564550 ACTCCTACTTGACAGCATTTTCAT 58.435 37.500 0.00 0.00 0.00 2.57
449 450 4.973168 ACTCCTACTTGACAGCATTTTCA 58.027 39.130 0.00 0.00 0.00 2.69
450 451 7.617041 ATTACTCCTACTTGACAGCATTTTC 57.383 36.000 0.00 0.00 0.00 2.29
451 452 8.322091 ACTATTACTCCTACTTGACAGCATTTT 58.678 33.333 0.00 0.00 0.00 1.82
452 453 7.766278 CACTATTACTCCTACTTGACAGCATTT 59.234 37.037 0.00 0.00 0.00 2.32
453 454 7.268586 CACTATTACTCCTACTTGACAGCATT 58.731 38.462 0.00 0.00 0.00 3.56
454 455 6.183360 CCACTATTACTCCTACTTGACAGCAT 60.183 42.308 0.00 0.00 0.00 3.79
455 456 5.127194 CCACTATTACTCCTACTTGACAGCA 59.873 44.000 0.00 0.00 0.00 4.41
456 457 5.593010 CCACTATTACTCCTACTTGACAGC 58.407 45.833 0.00 0.00 0.00 4.40
457 458 5.593010 GCCACTATTACTCCTACTTGACAG 58.407 45.833 0.00 0.00 0.00 3.51
458 459 4.097437 CGCCACTATTACTCCTACTTGACA 59.903 45.833 0.00 0.00 0.00 3.58
459 460 4.499357 CCGCCACTATTACTCCTACTTGAC 60.499 50.000 0.00 0.00 0.00 3.18
460 461 3.635373 CCGCCACTATTACTCCTACTTGA 59.365 47.826 0.00 0.00 0.00 3.02
461 462 3.799232 GCCGCCACTATTACTCCTACTTG 60.799 52.174 0.00 0.00 0.00 3.16
462 463 2.364647 GCCGCCACTATTACTCCTACTT 59.635 50.000 0.00 0.00 0.00 2.24
463 464 1.962100 GCCGCCACTATTACTCCTACT 59.038 52.381 0.00 0.00 0.00 2.57
464 465 1.684983 TGCCGCCACTATTACTCCTAC 59.315 52.381 0.00 0.00 0.00 3.18
465 466 1.961394 CTGCCGCCACTATTACTCCTA 59.039 52.381 0.00 0.00 0.00 2.94
466 467 0.753262 CTGCCGCCACTATTACTCCT 59.247 55.000 0.00 0.00 0.00 3.69
467 468 0.880718 GCTGCCGCCACTATTACTCC 60.881 60.000 0.00 0.00 0.00 3.85
468 469 0.179084 TGCTGCCGCCACTATTACTC 60.179 55.000 0.00 0.00 34.43 2.59
469 470 0.179073 CTGCTGCCGCCACTATTACT 60.179 55.000 0.00 0.00 34.43 2.24
470 471 1.776034 GCTGCTGCCGCCACTATTAC 61.776 60.000 4.57 0.00 34.43 1.89
471 472 1.523711 GCTGCTGCCGCCACTATTA 60.524 57.895 4.57 0.00 34.43 0.98
472 473 2.825836 GCTGCTGCCGCCACTATT 60.826 61.111 4.57 0.00 34.43 1.73
473 474 3.626996 TTGCTGCTGCCGCCACTAT 62.627 57.895 13.49 0.00 38.71 2.12
474 475 4.328025 TTGCTGCTGCCGCCACTA 62.328 61.111 13.49 0.00 38.71 2.74
480 481 2.839324 CTTTACGCTTGCTGCTGCCG 62.839 60.000 13.47 11.67 40.11 5.69
481 482 1.154150 CTTTACGCTTGCTGCTGCC 60.154 57.895 13.47 0.00 40.11 4.85
482 483 1.799121 GCTTTACGCTTGCTGCTGC 60.799 57.895 8.89 8.89 40.11 5.25
483 484 1.510623 CGCTTTACGCTTGCTGCTG 60.511 57.895 0.00 0.00 40.11 4.41
484 485 2.863153 CGCTTTACGCTTGCTGCT 59.137 55.556 0.00 0.00 40.11 4.24
512 513 2.233007 CGAGGCGTCTCTGCTTTTGC 62.233 60.000 16.21 0.00 38.82 3.68
513 514 1.784062 CGAGGCGTCTCTGCTTTTG 59.216 57.895 16.21 0.00 37.86 2.44
514 515 2.029844 GCGAGGCGTCTCTGCTTTT 61.030 57.895 21.11 0.00 37.86 2.27
515 516 2.433318 GCGAGGCGTCTCTGCTTT 60.433 61.111 21.11 0.00 37.86 3.51
528 529 3.869272 GCATGCAGGAACCGCGAG 61.869 66.667 14.21 0.00 0.00 5.03
531 532 4.120331 GTGGCATGCAGGAACCGC 62.120 66.667 21.36 3.43 0.00 5.68
532 533 3.803082 CGTGGCATGCAGGAACCG 61.803 66.667 21.36 7.69 0.00 4.44
533 534 4.120331 GCGTGGCATGCAGGAACC 62.120 66.667 26.05 0.64 0.00 3.62
534 535 4.120331 GGCGTGGCATGCAGGAAC 62.120 66.667 30.83 11.28 0.00 3.62
535 536 3.942377 ATGGCGTGGCATGCAGGAA 62.942 57.895 30.83 14.79 0.00 3.36
536 537 4.429522 ATGGCGTGGCATGCAGGA 62.430 61.111 30.83 15.70 0.00 3.86
537 538 4.201679 CATGGCGTGGCATGCAGG 62.202 66.667 30.83 16.49 0.00 4.85
538 539 3.135457 TCATGGCGTGGCATGCAG 61.135 61.111 30.83 20.06 0.00 4.41
539 540 3.442167 GTCATGGCGTGGCATGCA 61.442 61.111 30.83 18.16 30.99 3.96
540 541 3.442167 TGTCATGGCGTGGCATGC 61.442 61.111 26.26 23.28 37.56 4.06
544 545 3.136123 AGCATGTCATGGCGTGGC 61.136 61.111 20.63 12.71 34.54 5.01
545 546 1.712018 CTCAGCATGTCATGGCGTGG 61.712 60.000 20.63 5.60 37.40 4.94
546 547 1.022982 ACTCAGCATGTCATGGCGTG 61.023 55.000 15.35 15.35 37.40 5.34
547 548 0.321919 AACTCAGCATGTCATGGCGT 60.322 50.000 14.64 0.00 37.40 5.68
548 549 0.806868 AAACTCAGCATGTCATGGCG 59.193 50.000 14.64 0.00 37.40 5.69
549 550 1.734707 GCAAACTCAGCATGTCATGGC 60.735 52.381 14.64 6.99 37.40 4.40
550 551 1.542472 TGCAAACTCAGCATGTCATGG 59.458 47.619 14.64 0.42 37.02 3.66
551 552 3.242518 CTTGCAAACTCAGCATGTCATG 58.757 45.455 8.56 8.56 42.33 3.07
552 553 2.352421 GCTTGCAAACTCAGCATGTCAT 60.352 45.455 0.00 0.00 42.33 3.06
553 554 1.001048 GCTTGCAAACTCAGCATGTCA 60.001 47.619 0.00 0.00 42.33 3.58
554 555 1.001048 TGCTTGCAAACTCAGCATGTC 60.001 47.619 5.92 0.00 42.33 3.06
555 556 1.034356 TGCTTGCAAACTCAGCATGT 58.966 45.000 5.92 0.00 42.33 3.21
556 557 2.143008 TTGCTTGCAAACTCAGCATG 57.857 45.000 10.65 0.00 42.33 4.06
557 558 2.547218 CCTTTGCTTGCAAACTCAGCAT 60.547 45.455 15.66 0.00 42.33 3.79
558 559 1.202440 CCTTTGCTTGCAAACTCAGCA 60.202 47.619 15.66 5.92 40.85 4.41
559 560 1.067516 TCCTTTGCTTGCAAACTCAGC 59.932 47.619 15.66 0.00 0.00 4.26
560 561 2.620115 TCTCCTTTGCTTGCAAACTCAG 59.380 45.455 15.66 11.54 0.00 3.35
561 562 2.620115 CTCTCCTTTGCTTGCAAACTCA 59.380 45.455 15.66 0.00 0.00 3.41
562 563 2.880890 TCTCTCCTTTGCTTGCAAACTC 59.119 45.455 15.66 0.00 0.00 3.01
563 564 2.936202 TCTCTCCTTTGCTTGCAAACT 58.064 42.857 15.66 0.00 0.00 2.66
564 565 3.715628 TTCTCTCCTTTGCTTGCAAAC 57.284 42.857 15.66 0.00 0.00 2.93
565 566 4.942761 ATTTCTCTCCTTTGCTTGCAAA 57.057 36.364 18.06 18.06 0.00 3.68
566 567 4.942761 AATTTCTCTCCTTTGCTTGCAA 57.057 36.364 3.70 3.70 0.00 4.08
567 568 4.826733 TGTAATTTCTCTCCTTTGCTTGCA 59.173 37.500 0.00 0.00 0.00 4.08
568 569 5.157067 GTGTAATTTCTCTCCTTTGCTTGC 58.843 41.667 0.00 0.00 0.00 4.01
569 570 5.241506 TGGTGTAATTTCTCTCCTTTGCTTG 59.758 40.000 0.00 0.00 0.00 4.01
570 571 5.385198 TGGTGTAATTTCTCTCCTTTGCTT 58.615 37.500 0.00 0.00 0.00 3.91
571 572 4.985538 TGGTGTAATTTCTCTCCTTTGCT 58.014 39.130 0.00 0.00 0.00 3.91
572 573 5.415701 TGATGGTGTAATTTCTCTCCTTTGC 59.584 40.000 0.00 0.00 0.00 3.68
573 574 7.175641 ACTTGATGGTGTAATTTCTCTCCTTTG 59.824 37.037 0.00 0.00 0.00 2.77
574 575 7.175641 CACTTGATGGTGTAATTTCTCTCCTTT 59.824 37.037 0.00 0.00 33.04 3.11
575 576 6.656693 CACTTGATGGTGTAATTTCTCTCCTT 59.343 38.462 0.00 0.00 33.04 3.36
576 577 6.176183 CACTTGATGGTGTAATTTCTCTCCT 58.824 40.000 0.00 0.00 33.04 3.69
577 578 5.355350 CCACTTGATGGTGTAATTTCTCTCC 59.645 44.000 0.00 0.00 44.46 3.71
578 579 6.428385 CCACTTGATGGTGTAATTTCTCTC 57.572 41.667 0.00 0.00 44.46 3.20
592 593 5.050490 GCATAGTACTACCACCACTTGATG 58.950 45.833 4.31 0.00 0.00 3.07
593 594 4.962995 AGCATAGTACTACCACCACTTGAT 59.037 41.667 4.31 0.00 0.00 2.57
594 595 4.350245 AGCATAGTACTACCACCACTTGA 58.650 43.478 4.31 0.00 0.00 3.02
595 596 4.737855 AGCATAGTACTACCACCACTTG 57.262 45.455 4.31 0.00 0.00 3.16
596 597 7.433537 AATTAGCATAGTACTACCACCACTT 57.566 36.000 4.31 0.00 0.00 3.16
597 598 8.543293 TTAATTAGCATAGTACTACCACCACT 57.457 34.615 4.31 0.00 0.00 4.00
598 599 9.420551 GATTAATTAGCATAGTACTACCACCAC 57.579 37.037 4.31 0.00 0.00 4.16
599 600 9.375974 AGATTAATTAGCATAGTACTACCACCA 57.624 33.333 4.31 0.00 0.00 4.17
600 601 9.857957 GAGATTAATTAGCATAGTACTACCACC 57.142 37.037 4.31 0.00 0.00 4.61
631 632 8.687242 AGACTATTCATCAAGTCGTTCATTAGA 58.313 33.333 0.00 0.00 45.47 2.10
638 639 4.673441 CGGAGACTATTCATCAAGTCGTT 58.327 43.478 0.00 0.00 45.47 3.85
697 699 1.632948 GGTTGCGAGTTAACGGAGGC 61.633 60.000 0.00 3.40 34.85 4.70
859 927 4.610714 GATTCGGAGAGGGGCGGC 62.611 72.222 0.00 0.00 38.43 6.53
860 928 4.286320 CGATTCGGAGAGGGGCGG 62.286 72.222 0.00 0.00 38.43 6.13
861 929 4.951963 GCGATTCGGAGAGGGGCG 62.952 72.222 8.34 0.00 38.43 6.13
862 930 4.610714 GGCGATTCGGAGAGGGGC 62.611 72.222 8.34 0.00 38.43 5.80
863 931 4.286320 CGGCGATTCGGAGAGGGG 62.286 72.222 0.00 0.00 38.43 4.79
864 932 4.951963 GCGGCGATTCGGAGAGGG 62.952 72.222 12.98 0.00 38.43 4.30
865 933 4.951963 GGCGGCGATTCGGAGAGG 62.952 72.222 12.98 0.00 38.43 3.69
934 1023 2.031919 ACGTTGGCAGCGATTCCA 59.968 55.556 30.08 0.00 0.00 3.53
1357 1849 6.695292 ATGAATCGACAACAGAAAATTTGC 57.305 33.333 0.00 0.00 0.00 3.68
1731 2223 6.721318 AGCTATACCAGGATTTCAGAAAACA 58.279 36.000 0.00 0.00 0.00 2.83
1803 2295 5.185454 CCCATTAGACATGTACAGAGCAAA 58.815 41.667 0.00 0.00 0.00 3.68
2121 6176 0.173708 AAGCGGACGACATCTCCTTC 59.826 55.000 0.00 0.00 0.00 3.46
2323 6400 3.691118 TGATTTTCTGACTATGGCACTGC 59.309 43.478 0.00 0.00 0.00 4.40
2445 6522 7.284716 CCCCCTTTCCAGAAATATAAAGTGTAC 59.715 40.741 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.