Multiple sequence alignment - TraesCS2D01G172000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G172000 chr2D 100.000 4840 0 0 1 4840 115946943 115951782 0.000000e+00 8938.0
1 TraesCS2D01G172000 chr2D 89.202 815 72 12 134 937 446594563 446595372 0.000000e+00 1003.0
2 TraesCS2D01G172000 chr2D 90.385 156 12 3 1 154 313439860 313440014 8.210000e-48 202.0
3 TraesCS2D01G172000 chr1A 89.860 1647 107 30 2882 4505 52057346 52055737 0.000000e+00 2061.0
4 TraesCS2D01G172000 chr1A 90.973 1130 66 18 933 2028 52059361 52058234 0.000000e+00 1489.0
5 TraesCS2D01G172000 chr1A 87.912 546 19 17 2354 2884 52058149 52057636 2.490000e-167 599.0
6 TraesCS2D01G172000 chr1A 82.390 159 16 4 4400 4555 52055745 52055596 1.410000e-25 128.0
7 TraesCS2D01G172000 chr1A 89.831 59 4 2 4202 4259 52056112 52056055 1.870000e-09 75.0
8 TraesCS2D01G172000 chr1D 91.123 1318 62 24 2354 3651 52360038 52358756 0.000000e+00 1735.0
9 TraesCS2D01G172000 chr1D 91.991 924 60 6 933 1852 52361398 52360485 0.000000e+00 1284.0
10 TraesCS2D01G172000 chr1D 89.106 817 75 12 124 933 127242120 127242929 0.000000e+00 1003.0
11 TraesCS2D01G172000 chr1D 90.312 609 35 7 3638 4239 52358524 52357933 0.000000e+00 776.0
12 TraesCS2D01G172000 chr1D 90.303 165 12 1 1868 2028 52360288 52360124 3.790000e-51 213.0
13 TraesCS2D01G172000 chr1D 88.623 167 11 6 4339 4502 103408718 103408879 3.820000e-46 196.0
14 TraesCS2D01G172000 chr1D 86.782 174 14 7 4334 4504 493221923 493221756 8.270000e-43 185.0
15 TraesCS2D01G172000 chr1D 82.609 207 8 3 4633 4839 52357930 52357752 1.800000e-34 158.0
16 TraesCS2D01G172000 chr1D 98.214 56 1 0 4202 4257 52358039 52357984 1.110000e-16 99.0
17 TraesCS2D01G172000 chr1B 91.433 1284 58 19 2944 4215 83207296 83206053 0.000000e+00 1714.0
18 TraesCS2D01G172000 chr1B 91.095 1123 69 9 933 2028 83209058 83207940 0.000000e+00 1491.0
19 TraesCS2D01G172000 chr1B 91.404 570 22 12 2354 2907 83207855 83207297 0.000000e+00 756.0
20 TraesCS2D01G172000 chr1B 89.079 467 24 8 4379 4840 83204808 83204364 5.470000e-154 555.0
21 TraesCS2D01G172000 chr1B 89.877 326 29 4 2030 2352 350878919 350878595 2.690000e-112 416.0
22 TraesCS2D01G172000 chr1B 93.458 107 5 1 4243 4347 83206058 83205952 1.800000e-34 158.0
23 TraesCS2D01G172000 chr1B 94.828 58 2 1 4202 4259 83206134 83206078 6.670000e-14 89.8
24 TraesCS2D01G172000 chr2A 93.233 798 35 9 4049 4840 117390064 117390848 0.000000e+00 1157.0
25 TraesCS2D01G172000 chr2A 89.349 338 32 4 2018 2352 297335465 297335129 5.790000e-114 422.0
26 TraesCS2D01G172000 chr2A 93.103 58 3 1 4202 4259 117390149 117390205 3.100000e-12 84.2
27 TraesCS2D01G172000 chr6D 90.798 815 63 10 124 932 255530137 255529329 0.000000e+00 1079.0
28 TraesCS2D01G172000 chr6D 89.216 816 70 14 130 932 399042899 399042089 0.000000e+00 1003.0
29 TraesCS2D01G172000 chr6D 96.970 132 4 0 1 132 307094382 307094513 6.310000e-54 222.0
30 TraesCS2D01G172000 chr6D 88.824 170 10 7 4339 4505 431160668 431160831 2.950000e-47 200.0
31 TraesCS2D01G172000 chr6D 91.034 145 9 2 4362 4503 90135032 90134889 4.940000e-45 193.0
32 TraesCS2D01G172000 chr6D 87.059 170 14 5 4337 4503 218393512 218393676 8.270000e-43 185.0
33 TraesCS2D01G172000 chr7D 89.866 819 67 15 124 935 553228383 553227574 0.000000e+00 1038.0
34 TraesCS2D01G172000 chr7D 96.947 131 4 0 1 131 437057245 437057115 2.270000e-53 220.0
35 TraesCS2D01G172000 chr2B 90.494 810 41 13 3227 4015 166470914 166471708 0.000000e+00 1037.0
36 TraesCS2D01G172000 chr2B 87.076 913 72 15 2350 3243 166469856 166470741 0.000000e+00 990.0
37 TraesCS2D01G172000 chr2B 86.579 909 73 10 1165 2028 166468873 166469777 0.000000e+00 957.0
38 TraesCS2D01G172000 chr2B 91.319 288 13 8 4550 4837 166472220 166472495 2.730000e-102 383.0
39 TraesCS2D01G172000 chr6B 89.655 812 72 10 125 932 351342065 351342868 0.000000e+00 1024.0
40 TraesCS2D01G172000 chr6B 90.462 325 29 1 2030 2352 325760125 325759801 1.240000e-115 427.0
41 TraesCS2D01G172000 chr4D 89.338 816 72 13 124 933 458087949 458087143 0.000000e+00 1011.0
42 TraesCS2D01G172000 chr4D 92.000 150 10 2 1 149 40950850 40950998 4.910000e-50 209.0
43 TraesCS2D01G172000 chr4D 88.690 168 11 6 4338 4502 75266910 75266748 1.060000e-46 198.0
44 TraesCS2D01G172000 chr4D 87.719 171 12 6 4339 4505 465125471 465125306 1.780000e-44 191.0
45 TraesCS2D01G172000 chr4D 87.425 167 13 6 4339 4502 36603208 36603047 8.270000e-43 185.0
46 TraesCS2D01G172000 chr4D 87.425 167 13 6 4339 4502 64390632 64390471 8.270000e-43 185.0
47 TraesCS2D01G172000 chr4D 86.705 173 13 8 4338 4506 3590473 3590639 2.980000e-42 183.0
48 TraesCS2D01G172000 chr4D 86.286 175 14 9 4339 4509 34661688 34661520 1.070000e-41 182.0
49 TraesCS2D01G172000 chr4D 86.905 168 14 6 4338 4502 386984667 386984829 1.070000e-41 182.0
50 TraesCS2D01G172000 chr4D 86.905 168 12 9 4339 4503 401095860 401095700 3.850000e-41 180.0
51 TraesCS2D01G172000 chr4A 89.299 813 70 13 130 932 571994612 571993807 0.000000e+00 1003.0
52 TraesCS2D01G172000 chr4A 89.846 325 31 2 2030 2352 266611855 266611531 2.690000e-112 416.0
53 TraesCS2D01G172000 chr4A 89.286 168 10 5 4339 4503 150653313 150653475 2.280000e-48 204.0
54 TraesCS2D01G172000 chr5D 89.120 818 71 17 126 933 133553973 133554782 0.000000e+00 1002.0
55 TraesCS2D01G172000 chr5D 96.923 130 4 0 1 130 102342918 102343047 8.160000e-53 219.0
56 TraesCS2D01G172000 chr5D 86.702 188 14 9 4333 4516 512215664 512215844 1.060000e-46 198.0
57 TraesCS2D01G172000 chr5D 88.235 170 12 5 4336 4502 150835565 150835729 3.820000e-46 196.0
58 TraesCS2D01G172000 chr6A 90.462 325 29 1 2030 2352 291302981 291303305 1.240000e-115 427.0
59 TraesCS2D01G172000 chr6A 96.923 130 4 0 1 130 477675130 477675259 8.160000e-53 219.0
60 TraesCS2D01G172000 chr6A 88.889 162 11 4 4339 4497 28248782 28248939 4.940000e-45 193.0
61 TraesCS2D01G172000 chr6A 87.647 170 13 5 4337 4503 297641218 297641382 1.780000e-44 191.0
62 TraesCS2D01G172000 chrUn 90.462 325 28 3 2030 2352 137607744 137607421 4.480000e-115 425.0
63 TraesCS2D01G172000 chrUn 90.154 325 30 1 2030 2352 149922497 149922173 5.790000e-114 422.0
64 TraesCS2D01G172000 chrUn 90.093 323 32 0 2030 2352 54776366 54776688 2.080000e-113 420.0
65 TraesCS2D01G172000 chrUn 89.815 324 32 1 2030 2352 54054415 54054092 9.690000e-112 414.0
66 TraesCS2D01G172000 chrUn 90.728 151 9 3 4362 4507 80232813 80232663 3.820000e-46 196.0
67 TraesCS2D01G172000 chrUn 86.310 168 15 7 4338 4503 116287318 116287157 4.980000e-40 176.0
68 TraesCS2D01G172000 chrUn 86.228 167 15 6 4339 4502 141680907 141680746 1.790000e-39 174.0
69 TraesCS2D01G172000 chrUn 86.145 166 16 6 4339 4502 86671477 86671317 6.440000e-39 172.0
70 TraesCS2D01G172000 chrUn 87.671 146 14 3 4362 4504 47689731 47689587 3.000000e-37 167.0
71 TraesCS2D01G172000 chrUn 87.770 139 10 6 4338 4474 29994521 29994388 6.490000e-34 156.0
72 TraesCS2D01G172000 chrUn 91.228 114 9 1 4362 4474 87983381 87983268 2.330000e-33 154.0
73 TraesCS2D01G172000 chrUn 87.500 136 13 3 4339 4474 127140184 127140053 2.330000e-33 154.0
74 TraesCS2D01G172000 chrUn 83.929 168 19 7 4338 4502 320881740 320881578 2.330000e-33 154.0
75 TraesCS2D01G172000 chrUn 86.111 144 16 3 4362 4502 88350280 88350138 8.390000e-33 152.0
76 TraesCS2D01G172000 chrUn 85.714 147 17 3 4362 4505 344406337 344406192 8.390000e-33 152.0
77 TraesCS2D01G172000 chrUn 83.333 174 16 10 4338 4504 104514361 104514194 1.090000e-31 148.0
78 TraesCS2D01G172000 chrUn 83.429 175 14 12 4338 4504 173546536 173546703 1.090000e-31 148.0
79 TraesCS2D01G172000 chrUn 83.146 178 15 12 4336 4506 305227638 305227469 1.090000e-31 148.0
80 TraesCS2D01G172000 chrUn 83.146 178 15 12 4336 4506 305228866 305228697 1.090000e-31 148.0
81 TraesCS2D01G172000 chr3D 94.928 138 7 0 1 138 422876163 422876026 2.930000e-52 217.0
82 TraesCS2D01G172000 chr3D 88.623 167 11 5 4339 4502 528611687 528611526 3.820000e-46 196.0
83 TraesCS2D01G172000 chr3D 88.690 168 9 8 4338 4502 563861161 563861321 3.820000e-46 196.0
84 TraesCS2D01G172000 chr3D 87.931 174 10 9 4338 4506 87925999 87926166 1.370000e-45 195.0
85 TraesCS2D01G172000 chr3B 85.000 220 23 7 1 217 526779550 526779762 1.060000e-51 215.0
86 TraesCS2D01G172000 chr7A 94.286 140 7 1 1 139 202270768 202270907 3.790000e-51 213.0
87 TraesCS2D01G172000 chr3A 88.136 177 12 6 4338 4510 600923241 600923070 8.210000e-48 202.0
88 TraesCS2D01G172000 chr5A 87.500 176 14 6 4338 4510 320214243 320214413 3.820000e-46 196.0
89 TraesCS2D01G172000 chr4B 86.517 178 15 7 4333 4506 135218042 135218214 2.300000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G172000 chr2D 115946943 115951782 4839 False 8938.000000 8938 100.000000 1 4840 1 chr2D.!!$F1 4839
1 TraesCS2D01G172000 chr2D 446594563 446595372 809 False 1003.000000 1003 89.202000 134 937 1 chr2D.!!$F3 803
2 TraesCS2D01G172000 chr1A 52055596 52059361 3765 True 870.400000 2061 88.193200 933 4555 5 chr1A.!!$R1 3622
3 TraesCS2D01G172000 chr1D 127242120 127242929 809 False 1003.000000 1003 89.106000 124 933 1 chr1D.!!$F2 809
4 TraesCS2D01G172000 chr1D 52357752 52361398 3646 True 710.833333 1735 90.758667 933 4839 6 chr1D.!!$R2 3906
5 TraesCS2D01G172000 chr1B 83204364 83209058 4694 True 793.966667 1714 91.882833 933 4840 6 chr1B.!!$R2 3907
6 TraesCS2D01G172000 chr2A 117390064 117390848 784 False 620.600000 1157 93.168000 4049 4840 2 chr2A.!!$F1 791
7 TraesCS2D01G172000 chr6D 255529329 255530137 808 True 1079.000000 1079 90.798000 124 932 1 chr6D.!!$R2 808
8 TraesCS2D01G172000 chr6D 399042089 399042899 810 True 1003.000000 1003 89.216000 130 932 1 chr6D.!!$R3 802
9 TraesCS2D01G172000 chr7D 553227574 553228383 809 True 1038.000000 1038 89.866000 124 935 1 chr7D.!!$R2 811
10 TraesCS2D01G172000 chr2B 166468873 166472495 3622 False 841.750000 1037 88.867000 1165 4837 4 chr2B.!!$F1 3672
11 TraesCS2D01G172000 chr6B 351342065 351342868 803 False 1024.000000 1024 89.655000 125 932 1 chr6B.!!$F1 807
12 TraesCS2D01G172000 chr4D 458087143 458087949 806 True 1011.000000 1011 89.338000 124 933 1 chr4D.!!$R6 809
13 TraesCS2D01G172000 chr4A 571993807 571994612 805 True 1003.000000 1003 89.299000 130 932 1 chr4A.!!$R2 802
14 TraesCS2D01G172000 chr5D 133553973 133554782 809 False 1002.000000 1002 89.120000 126 933 1 chr5D.!!$F2 807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
960 993 0.401356 TTTCAGGGAGCATCTGCACA 59.599 50.0 4.79 0.0 45.16 4.57 F
2055 2318 0.106167 TGATAGAGGTGAGGGTCCCG 60.106 60.0 0.99 0.0 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2085 2348 0.031585 CGTCAAAGTCGTCTCCACCA 59.968 55.000 0.00 0.0 0.00 4.17 R
3966 5007 1.217942 TGGGGCTATAGCAGAGTGAGA 59.782 52.381 25.53 0.0 44.36 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.959721 ATTCATACATGTACTAAGTTTCTGGTT 57.040 29.630 7.96 0.00 0.00 3.67
109 110 6.530019 ACAACTTTATTATTGCCTCAAGGG 57.470 37.500 0.00 0.00 35.18 3.95
122 123 3.902218 CCTCAAGGGCATATTTCCTTCA 58.098 45.455 3.92 0.00 41.06 3.02
173 177 2.841215 CGGACTGAAAACTGGGTAACA 58.159 47.619 0.00 0.00 39.74 2.41
174 178 3.207778 CGGACTGAAAACTGGGTAACAA 58.792 45.455 0.00 0.00 39.74 2.83
183 188 6.989169 TGAAAACTGGGTAACAATTGGATTTG 59.011 34.615 10.83 0.00 39.74 2.32
190 195 3.676291 AACAATTGGATTTGTTCCCCG 57.324 42.857 10.83 0.00 44.39 5.73
192 197 0.530288 AATTGGATTTGTTCCCCGCG 59.470 50.000 0.00 0.00 44.77 6.46
204 209 1.927487 TCCCCGCGCTATATAAAGGA 58.073 50.000 5.56 0.00 0.00 3.36
229 236 1.600636 CTTCCCAAGAAGCGCACCA 60.601 57.895 11.47 0.00 42.97 4.17
236 243 0.603975 AAGAAGCGCACCACTTCCTC 60.604 55.000 11.47 0.00 43.75 3.71
325 335 7.947890 ACTTGTTGATTCTTTAGGGATTGGTTA 59.052 33.333 0.00 0.00 0.00 2.85
414 426 2.664402 ACTCTTGGGTGTTTGAGCAT 57.336 45.000 0.00 0.00 0.00 3.79
428 440 2.176045 TGAGCATCCTAGACGGTTGAA 58.824 47.619 0.00 0.00 34.93 2.69
453 467 1.140852 CCTCGGAGCCACATTCCATTA 59.859 52.381 0.00 0.00 34.24 1.90
454 468 2.224621 CCTCGGAGCCACATTCCATTAT 60.225 50.000 0.00 0.00 34.24 1.28
455 469 3.007940 CCTCGGAGCCACATTCCATTATA 59.992 47.826 0.00 0.00 34.24 0.98
490 504 0.623723 GGTGTTGGGAGCCTCCAATA 59.376 55.000 13.90 6.37 46.97 1.90
510 524 2.266055 GTTGTGGAGAGAGCCCCG 59.734 66.667 0.00 0.00 0.00 5.73
522 536 1.515521 GAGCCCCGACCTTGTTTGTG 61.516 60.000 0.00 0.00 0.00 3.33
612 626 1.125633 GGAGAATACGGTGGCCCTAA 58.874 55.000 0.00 0.00 0.00 2.69
789 811 3.445450 TCCTTTGCTTGCTTGTGTTGTTA 59.555 39.130 0.00 0.00 0.00 2.41
831 853 4.703897 GGTTGCTCACCTAGTTGCATATA 58.296 43.478 0.00 0.00 43.29 0.86
899 931 6.909550 AAAATTGGTAGTTGCCTATTCACA 57.090 33.333 0.00 0.00 33.93 3.58
900 932 5.897377 AATTGGTAGTTGCCTATTCACAC 57.103 39.130 0.00 0.00 30.24 3.82
901 933 4.359434 TTGGTAGTTGCCTATTCACACA 57.641 40.909 0.00 0.00 0.00 3.72
939 972 6.037172 ACCATATCGATCCTTTCAACTTTTCG 59.963 38.462 0.00 0.00 0.00 3.46
950 983 3.211045 TCAACTTTTCGGTTTCAGGGAG 58.789 45.455 0.00 0.00 0.00 4.30
960 993 0.401356 TTTCAGGGAGCATCTGCACA 59.599 50.000 4.79 0.00 45.16 4.57
968 1001 2.159043 GGAGCATCTGCACAGTAAGCTA 60.159 50.000 4.79 0.00 45.16 3.32
1040 1073 6.320434 TGGTCTATGGAACCATGTATTCAA 57.680 37.500 15.59 0.00 37.82 2.69
1046 1079 8.106462 TCTATGGAACCATGTATTCAACAAGAA 58.894 33.333 15.59 0.00 42.70 2.52
1054 1087 7.721399 ACCATGTATTCAACAAGAAAGAGTTCT 59.279 33.333 0.00 0.00 46.47 3.01
1105 1138 3.181479 TGGGAAGACGGTAATTCATCTCG 60.181 47.826 7.59 0.00 0.00 4.04
1124 1157 9.297586 TCATCTCGAACTTATGTTTACATGTAC 57.702 33.333 4.68 0.00 37.15 2.90
1151 1184 7.741554 AGTATTGAGTCAACTATCTCCCTTT 57.258 36.000 7.96 0.00 0.00 3.11
1156 1191 7.311092 TGAGTCAACTATCTCCCTTTTGTTA 57.689 36.000 0.00 0.00 0.00 2.41
1159 1194 8.392372 AGTCAACTATCTCCCTTTTGTTAAAC 57.608 34.615 0.00 0.00 0.00 2.01
1165 1200 9.533831 ACTATCTCCCTTTTGTTAAACATTGAT 57.466 29.630 0.00 0.00 0.00 2.57
1246 1289 7.566760 TTGCTAGAAAAGTTGAAGTCAATCA 57.433 32.000 0.00 0.00 38.24 2.57
1258 1301 7.922811 AGTTGAAGTCAATCAATTTGAAAGGAC 59.077 33.333 15.19 15.19 45.71 3.85
1290 1333 3.312421 CACATGATCGTATTGGTCCAACC 59.688 47.826 6.41 0.00 39.22 3.77
1309 1352 2.445525 ACCGTGGGGCTTAATATTGGAT 59.554 45.455 0.00 0.00 36.48 3.41
1354 1397 2.879103 TGTTTTCTGGGATCTGGGAC 57.121 50.000 0.00 0.00 0.00 4.46
1484 1527 5.713389 AGATTGATGTTTGCTCATTTCTCCA 59.287 36.000 0.00 0.00 0.00 3.86
1503 1546 8.648698 TTCTCCAATCTCCATTTTCATTAACA 57.351 30.769 0.00 0.00 0.00 2.41
1504 1547 8.648698 TCTCCAATCTCCATTTTCATTAACAA 57.351 30.769 0.00 0.00 0.00 2.83
1589 1633 5.793817 AGTAGAGTTGCACATGTTGTATCA 58.206 37.500 0.00 0.00 0.00 2.15
1637 1699 7.001674 ACTGGTTAATGGATTGTGTTTCACTA 58.998 34.615 1.72 0.00 35.11 2.74
1657 1720 8.897872 TCACTACTTTCTAAACCTTTAACTGG 57.102 34.615 0.00 0.00 0.00 4.00
1787 1856 9.013229 AGATAGAATACACTTCATTTTGCAACA 57.987 29.630 0.00 0.00 0.00 3.33
1788 1857 9.282247 GATAGAATACACTTCATTTTGCAACAG 57.718 33.333 0.00 0.00 0.00 3.16
1840 1917 3.903467 AGGCCAGTTTTCATCCCTTATC 58.097 45.455 5.01 0.00 0.00 1.75
1902 2160 7.659390 AGAGTTGATGCTTATACTAAAGGCATC 59.341 37.037 16.20 16.20 38.75 3.91
1993 2255 8.709308 ACCTTATACTTTGATGCTACAGAGATT 58.291 33.333 7.85 0.11 0.00 2.40
2048 2311 9.823647 ATATTTGTACAACTTGATAGAGGTGAG 57.176 33.333 8.07 0.00 36.43 3.51
2049 2312 5.661056 TGTACAACTTGATAGAGGTGAGG 57.339 43.478 0.00 0.00 36.43 3.86
2051 2314 3.521727 ACAACTTGATAGAGGTGAGGGT 58.478 45.455 0.00 0.00 36.43 4.34
2052 2315 3.515901 ACAACTTGATAGAGGTGAGGGTC 59.484 47.826 0.00 0.00 36.43 4.46
2055 2318 0.106167 TGATAGAGGTGAGGGTCCCG 60.106 60.000 0.99 0.00 0.00 5.14
2056 2319 0.185416 GATAGAGGTGAGGGTCCCGA 59.815 60.000 0.99 0.00 0.00 5.14
2057 2320 0.861155 ATAGAGGTGAGGGTCCCGAT 59.139 55.000 0.99 0.00 0.00 4.18
2058 2321 0.185416 TAGAGGTGAGGGTCCCGATC 59.815 60.000 0.99 0.00 0.00 3.69
2059 2322 1.075896 GAGGTGAGGGTCCCGATCT 60.076 63.158 0.99 0.00 0.00 2.75
2061 2324 0.252742 AGGTGAGGGTCCCGATCTTT 60.253 55.000 0.99 0.00 0.00 2.52
2062 2325 0.178301 GGTGAGGGTCCCGATCTTTC 59.822 60.000 0.99 0.00 0.00 2.62
2081 2344 9.220635 GATCTTTCGATGAGATGATAACTATCG 57.779 37.037 14.43 0.00 38.86 2.92
2083 2346 8.951243 TCTTTCGATGAGATGATAACTATCGAT 58.049 33.333 2.16 2.16 43.69 3.59
2084 2347 9.566530 CTTTCGATGAGATGATAACTATCGATT 57.433 33.333 1.71 0.00 43.69 3.34
2085 2348 9.914131 TTTCGATGAGATGATAACTATCGATTT 57.086 29.630 1.71 0.00 43.69 2.17
2086 2349 8.902040 TCGATGAGATGATAACTATCGATTTG 57.098 34.615 1.71 0.00 40.71 2.32
2087 2350 7.970614 TCGATGAGATGATAACTATCGATTTGG 59.029 37.037 1.71 0.00 40.71 3.28
2088 2351 7.757173 CGATGAGATGATAACTATCGATTTGGT 59.243 37.037 1.71 0.00 39.60 3.67
2089 2352 8.768957 ATGAGATGATAACTATCGATTTGGTG 57.231 34.615 1.71 0.00 35.48 4.17
2090 2353 7.154656 TGAGATGATAACTATCGATTTGGTGG 58.845 38.462 1.71 0.00 35.48 4.61
2093 2356 6.724893 TGATAACTATCGATTTGGTGGAGA 57.275 37.500 1.71 0.00 35.48 3.71
2094 2357 6.513180 TGATAACTATCGATTTGGTGGAGAC 58.487 40.000 1.71 0.00 35.48 3.36
2095 2358 3.438297 ACTATCGATTTGGTGGAGACG 57.562 47.619 1.71 0.00 0.00 4.18
2096 2359 3.021695 ACTATCGATTTGGTGGAGACGA 58.978 45.455 1.71 0.00 0.00 4.20
2097 2360 2.295253 ATCGATTTGGTGGAGACGAC 57.705 50.000 0.00 0.00 32.93 4.34
2098 2361 1.254026 TCGATTTGGTGGAGACGACT 58.746 50.000 0.00 0.00 0.00 4.18
2100 2363 2.036733 TCGATTTGGTGGAGACGACTTT 59.963 45.455 0.00 0.00 0.00 2.66
2101 2364 2.157668 CGATTTGGTGGAGACGACTTTG 59.842 50.000 0.00 0.00 0.00 2.77
2102 2365 2.992124 TTTGGTGGAGACGACTTTGA 57.008 45.000 0.00 0.00 0.00 2.69
2103 2366 2.234300 TTGGTGGAGACGACTTTGAC 57.766 50.000 0.00 0.00 0.00 3.18
2104 2367 0.031585 TGGTGGAGACGACTTTGACG 59.968 55.000 0.00 0.00 0.00 4.35
2105 2368 0.313043 GGTGGAGACGACTTTGACGA 59.687 55.000 0.00 0.00 34.70 4.20
2106 2369 1.067776 GGTGGAGACGACTTTGACGAT 60.068 52.381 0.00 0.00 34.70 3.73
2107 2370 2.251893 GTGGAGACGACTTTGACGATC 58.748 52.381 0.00 0.00 34.70 3.69
2108 2371 1.201647 TGGAGACGACTTTGACGATCC 59.798 52.381 0.00 0.00 39.01 3.36
2109 2372 1.536149 GAGACGACTTTGACGATCCG 58.464 55.000 0.00 0.00 34.70 4.18
2110 2373 1.129998 GAGACGACTTTGACGATCCGA 59.870 52.381 0.00 0.00 34.70 4.55
2111 2374 1.135746 AGACGACTTTGACGATCCGAC 60.136 52.381 0.00 0.00 34.70 4.79
2112 2375 0.879765 ACGACTTTGACGATCCGACT 59.120 50.000 0.00 0.00 34.70 4.18
2113 2376 2.079158 ACGACTTTGACGATCCGACTA 58.921 47.619 0.00 0.00 34.70 2.59
2114 2377 2.159599 ACGACTTTGACGATCCGACTAC 60.160 50.000 0.00 0.00 34.70 2.73
2115 2378 2.438583 GACTTTGACGATCCGACTACG 58.561 52.381 0.00 0.00 39.43 3.51
2116 2379 2.079158 ACTTTGACGATCCGACTACGA 58.921 47.619 0.00 0.00 42.66 3.43
2117 2380 2.485426 ACTTTGACGATCCGACTACGAA 59.515 45.455 0.00 0.00 42.66 3.85
2118 2381 2.532531 TTGACGATCCGACTACGAAC 57.467 50.000 0.00 0.00 42.66 3.95
2119 2382 1.441738 TGACGATCCGACTACGAACA 58.558 50.000 0.00 0.00 42.66 3.18
2120 2383 2.011947 TGACGATCCGACTACGAACAT 58.988 47.619 0.00 0.00 42.66 2.71
2121 2384 2.223180 TGACGATCCGACTACGAACATG 60.223 50.000 0.00 0.00 42.66 3.21
2122 2385 1.121240 CGATCCGACTACGAACATGC 58.879 55.000 0.00 0.00 42.66 4.06
2123 2386 1.533129 CGATCCGACTACGAACATGCA 60.533 52.381 0.00 0.00 42.66 3.96
2124 2387 2.536365 GATCCGACTACGAACATGCAA 58.464 47.619 0.00 0.00 42.66 4.08
2125 2388 1.990799 TCCGACTACGAACATGCAAG 58.009 50.000 0.00 0.00 42.66 4.01
2126 2389 0.999406 CCGACTACGAACATGCAAGG 59.001 55.000 0.00 0.00 42.66 3.61
2127 2390 1.403647 CCGACTACGAACATGCAAGGA 60.404 52.381 0.00 0.00 42.66 3.36
2128 2391 1.654105 CGACTACGAACATGCAAGGAC 59.346 52.381 0.00 0.00 42.66 3.85
2129 2392 1.654105 GACTACGAACATGCAAGGACG 59.346 52.381 0.00 0.00 0.00 4.79
2130 2393 1.000506 ACTACGAACATGCAAGGACGT 59.999 47.619 16.52 16.52 37.73 4.34
2131 2394 1.654105 CTACGAACATGCAAGGACGTC 59.346 52.381 15.98 7.13 36.14 4.34
2132 2395 1.282248 ACGAACATGCAAGGACGTCG 61.282 55.000 9.92 7.25 30.86 5.12
2133 2396 1.282248 CGAACATGCAAGGACGTCGT 61.282 55.000 9.92 7.31 0.00 4.34
2134 2397 0.163788 GAACATGCAAGGACGTCGTG 59.836 55.000 12.13 12.20 0.00 4.35
2138 2401 2.665185 GCAAGGACGTCGTGCCTT 60.665 61.111 24.75 16.26 45.07 4.35
2139 2402 1.373748 GCAAGGACGTCGTGCCTTA 60.374 57.895 24.75 0.00 42.41 2.69
2140 2403 1.352156 GCAAGGACGTCGTGCCTTAG 61.352 60.000 24.75 17.28 42.41 2.18
2141 2404 1.080025 AAGGACGTCGTGCCTTAGC 60.080 57.895 20.55 0.00 42.49 3.09
2159 2422 2.544480 GCAATCGCTAAACCAACTCC 57.456 50.000 0.00 0.00 34.30 3.85
2160 2423 1.810151 GCAATCGCTAAACCAACTCCA 59.190 47.619 0.00 0.00 34.30 3.86
2161 2424 2.227865 GCAATCGCTAAACCAACTCCAA 59.772 45.455 0.00 0.00 34.30 3.53
2162 2425 3.670627 GCAATCGCTAAACCAACTCCAAG 60.671 47.826 0.00 0.00 34.30 3.61
2163 2426 3.695830 ATCGCTAAACCAACTCCAAGA 57.304 42.857 0.00 0.00 0.00 3.02
2164 2427 3.478857 TCGCTAAACCAACTCCAAGAA 57.521 42.857 0.00 0.00 0.00 2.52
2165 2428 3.399330 TCGCTAAACCAACTCCAAGAAG 58.601 45.455 0.00 0.00 0.00 2.85
2166 2429 3.139077 CGCTAAACCAACTCCAAGAAGT 58.861 45.455 0.00 0.00 0.00 3.01
2167 2430 3.564225 CGCTAAACCAACTCCAAGAAGTT 59.436 43.478 0.00 0.00 40.08 2.66
2168 2431 4.753107 CGCTAAACCAACTCCAAGAAGTTA 59.247 41.667 0.00 0.00 37.38 2.24
2169 2432 5.411669 CGCTAAACCAACTCCAAGAAGTTAT 59.588 40.000 0.00 0.00 37.38 1.89
2170 2433 6.072673 CGCTAAACCAACTCCAAGAAGTTATT 60.073 38.462 0.00 0.00 37.38 1.40
2171 2434 7.084486 GCTAAACCAACTCCAAGAAGTTATTG 58.916 38.462 3.16 3.16 37.38 1.90
2172 2435 7.040686 GCTAAACCAACTCCAAGAAGTTATTGA 60.041 37.037 11.78 0.00 37.38 2.57
2173 2436 6.635030 AACCAACTCCAAGAAGTTATTGAC 57.365 37.500 11.78 0.00 37.38 3.18
2174 2437 5.070685 ACCAACTCCAAGAAGTTATTGACC 58.929 41.667 11.78 0.00 37.38 4.02
2175 2438 5.070001 CCAACTCCAAGAAGTTATTGACCA 58.930 41.667 11.78 0.00 37.38 4.02
2176 2439 5.048713 CCAACTCCAAGAAGTTATTGACCAC 60.049 44.000 11.78 0.00 37.38 4.16
2177 2440 4.315803 ACTCCAAGAAGTTATTGACCACG 58.684 43.478 11.78 0.00 0.00 4.94
2178 2441 3.071479 TCCAAGAAGTTATTGACCACGC 58.929 45.455 11.78 0.00 0.00 5.34
2179 2442 2.161609 CCAAGAAGTTATTGACCACGCC 59.838 50.000 11.78 0.00 0.00 5.68
2180 2443 1.722011 AGAAGTTATTGACCACGCCG 58.278 50.000 0.00 0.00 0.00 6.46
2181 2444 0.725117 GAAGTTATTGACCACGCCGG 59.275 55.000 0.00 0.00 42.50 6.13
2182 2445 0.322322 AAGTTATTGACCACGCCGGA 59.678 50.000 5.05 0.00 38.63 5.14
2183 2446 0.108329 AGTTATTGACCACGCCGGAG 60.108 55.000 5.05 3.72 38.63 4.63
2184 2447 1.448893 TTATTGACCACGCCGGAGC 60.449 57.895 5.05 0.00 38.63 4.70
2185 2448 2.173758 TTATTGACCACGCCGGAGCA 62.174 55.000 5.05 0.00 39.83 4.26
2186 2449 1.966901 TATTGACCACGCCGGAGCAT 61.967 55.000 5.05 0.00 39.83 3.79
2187 2450 1.966901 ATTGACCACGCCGGAGCATA 61.967 55.000 5.05 0.00 39.83 3.14
2188 2451 2.173758 TTGACCACGCCGGAGCATAA 62.174 55.000 5.05 0.00 39.83 1.90
2189 2452 1.227556 GACCACGCCGGAGCATAAT 60.228 57.895 5.05 0.00 39.83 1.28
2190 2453 1.222115 GACCACGCCGGAGCATAATC 61.222 60.000 5.05 0.00 39.83 1.75
2191 2454 1.227527 CCACGCCGGAGCATAATCA 60.228 57.895 5.05 0.00 39.83 2.57
2192 2455 0.813610 CCACGCCGGAGCATAATCAA 60.814 55.000 5.05 0.00 39.83 2.57
2193 2456 0.304705 CACGCCGGAGCATAATCAAC 59.695 55.000 5.05 0.00 39.83 3.18
2194 2457 0.814010 ACGCCGGAGCATAATCAACC 60.814 55.000 5.05 0.00 39.83 3.77
2195 2458 0.532862 CGCCGGAGCATAATCAACCT 60.533 55.000 5.05 0.00 39.83 3.50
2196 2459 0.947244 GCCGGAGCATAATCAACCTG 59.053 55.000 5.05 0.00 39.53 4.00
2197 2460 1.475034 GCCGGAGCATAATCAACCTGA 60.475 52.381 5.05 0.00 39.53 3.86
2198 2461 2.213499 CCGGAGCATAATCAACCTGAC 58.787 52.381 0.00 0.00 0.00 3.51
2199 2462 2.213499 CGGAGCATAATCAACCTGACC 58.787 52.381 0.00 0.00 0.00 4.02
2200 2463 2.419990 CGGAGCATAATCAACCTGACCA 60.420 50.000 0.00 0.00 0.00 4.02
2201 2464 2.945668 GGAGCATAATCAACCTGACCAC 59.054 50.000 0.00 0.00 0.00 4.16
2202 2465 2.609459 GAGCATAATCAACCTGACCACG 59.391 50.000 0.00 0.00 0.00 4.94
2203 2466 2.236146 AGCATAATCAACCTGACCACGA 59.764 45.455 0.00 0.00 0.00 4.35
2204 2467 3.006940 GCATAATCAACCTGACCACGAA 58.993 45.455 0.00 0.00 0.00 3.85
2205 2468 3.063997 GCATAATCAACCTGACCACGAAG 59.936 47.826 0.00 0.00 0.00 3.79
2206 2469 2.185004 AATCAACCTGACCACGAAGG 57.815 50.000 0.00 0.00 45.67 3.46
2218 2481 2.280628 CCACGAAGGTCTATTTCCTGC 58.719 52.381 0.00 0.00 35.27 4.85
2219 2482 2.354704 CCACGAAGGTCTATTTCCTGCA 60.355 50.000 0.00 0.00 35.27 4.41
2220 2483 2.673368 CACGAAGGTCTATTTCCTGCAC 59.327 50.000 0.00 0.00 35.27 4.57
2221 2484 2.280628 CGAAGGTCTATTTCCTGCACC 58.719 52.381 0.00 0.00 35.27 5.01
2222 2485 2.644676 GAAGGTCTATTTCCTGCACCC 58.355 52.381 0.00 0.00 35.27 4.61
2223 2486 1.668826 AGGTCTATTTCCTGCACCCA 58.331 50.000 0.00 0.00 33.62 4.51
2224 2487 1.992557 AGGTCTATTTCCTGCACCCAA 59.007 47.619 0.00 0.00 33.62 4.12
2225 2488 2.378547 AGGTCTATTTCCTGCACCCAAA 59.621 45.455 0.00 0.00 33.62 3.28
2226 2489 2.492088 GGTCTATTTCCTGCACCCAAAC 59.508 50.000 0.00 0.00 0.00 2.93
2227 2490 2.161609 GTCTATTTCCTGCACCCAAACG 59.838 50.000 0.00 0.00 0.00 3.60
2228 2491 2.039216 TCTATTTCCTGCACCCAAACGA 59.961 45.455 0.00 0.00 0.00 3.85
2229 2492 1.698506 ATTTCCTGCACCCAAACGAA 58.301 45.000 0.00 0.00 0.00 3.85
2230 2493 1.028905 TTTCCTGCACCCAAACGAAG 58.971 50.000 0.00 0.00 0.00 3.79
2231 2494 0.181587 TTCCTGCACCCAAACGAAGA 59.818 50.000 0.00 0.00 0.00 2.87
2232 2495 0.181587 TCCTGCACCCAAACGAAGAA 59.818 50.000 0.00 0.00 0.00 2.52
2233 2496 0.310854 CCTGCACCCAAACGAAGAAC 59.689 55.000 0.00 0.00 0.00 3.01
2234 2497 1.021202 CTGCACCCAAACGAAGAACA 58.979 50.000 0.00 0.00 0.00 3.18
2235 2498 1.403679 CTGCACCCAAACGAAGAACAA 59.596 47.619 0.00 0.00 0.00 2.83
2236 2499 1.403679 TGCACCCAAACGAAGAACAAG 59.596 47.619 0.00 0.00 0.00 3.16
2237 2500 1.404035 GCACCCAAACGAAGAACAAGT 59.596 47.619 0.00 0.00 0.00 3.16
2238 2501 2.614983 GCACCCAAACGAAGAACAAGTA 59.385 45.455 0.00 0.00 0.00 2.24
2239 2502 3.065648 GCACCCAAACGAAGAACAAGTAA 59.934 43.478 0.00 0.00 0.00 2.24
2240 2503 4.788521 GCACCCAAACGAAGAACAAGTAAG 60.789 45.833 0.00 0.00 0.00 2.34
2241 2504 4.573201 CACCCAAACGAAGAACAAGTAAGA 59.427 41.667 0.00 0.00 0.00 2.10
2242 2505 5.065474 CACCCAAACGAAGAACAAGTAAGAA 59.935 40.000 0.00 0.00 0.00 2.52
2243 2506 5.648960 ACCCAAACGAAGAACAAGTAAGAAA 59.351 36.000 0.00 0.00 0.00 2.52
2244 2507 6.320418 ACCCAAACGAAGAACAAGTAAGAAAT 59.680 34.615 0.00 0.00 0.00 2.17
2245 2508 7.147966 ACCCAAACGAAGAACAAGTAAGAAATT 60.148 33.333 0.00 0.00 0.00 1.82
2246 2509 8.347035 CCCAAACGAAGAACAAGTAAGAAATTA 58.653 33.333 0.00 0.00 0.00 1.40
2247 2510 9.724839 CCAAACGAAGAACAAGTAAGAAATTAA 57.275 29.630 0.00 0.00 0.00 1.40
2302 2565 9.710900 AAGAAAAGCTTTATTAATGAAAGTGGG 57.289 29.630 13.10 0.00 36.47 4.61
2303 2566 8.314021 AGAAAAGCTTTATTAATGAAAGTGGGG 58.686 33.333 13.10 0.00 36.47 4.96
2304 2567 7.553504 AAAGCTTTATTAATGAAAGTGGGGT 57.446 32.000 10.72 0.00 36.47 4.95
2305 2568 7.553504 AAGCTTTATTAATGAAAGTGGGGTT 57.446 32.000 0.00 0.00 36.47 4.11
2306 2569 7.170393 AGCTTTATTAATGAAAGTGGGGTTC 57.830 36.000 0.00 0.00 36.47 3.62
2307 2570 6.954102 AGCTTTATTAATGAAAGTGGGGTTCT 59.046 34.615 0.00 0.00 36.47 3.01
2308 2571 7.035612 GCTTTATTAATGAAAGTGGGGTTCTG 58.964 38.462 0.00 0.00 36.47 3.02
2309 2572 7.309805 GCTTTATTAATGAAAGTGGGGTTCTGT 60.310 37.037 0.00 0.00 36.47 3.41
2310 2573 5.982890 ATTAATGAAAGTGGGGTTCTGTG 57.017 39.130 0.00 0.00 0.00 3.66
2311 2574 3.593442 AATGAAAGTGGGGTTCTGTGA 57.407 42.857 0.00 0.00 0.00 3.58
2312 2575 2.341846 TGAAAGTGGGGTTCTGTGAC 57.658 50.000 0.00 0.00 0.00 3.67
2313 2576 1.226746 GAAAGTGGGGTTCTGTGACG 58.773 55.000 0.00 0.00 0.00 4.35
2314 2577 0.544697 AAAGTGGGGTTCTGTGACGT 59.455 50.000 0.00 0.00 0.00 4.34
2315 2578 0.106149 AAGTGGGGTTCTGTGACGTC 59.894 55.000 9.11 9.11 0.00 4.34
2316 2579 0.759436 AGTGGGGTTCTGTGACGTCT 60.759 55.000 17.92 0.00 0.00 4.18
2317 2580 0.106149 GTGGGGTTCTGTGACGTCTT 59.894 55.000 17.92 0.00 0.00 3.01
2318 2581 0.105964 TGGGGTTCTGTGACGTCTTG 59.894 55.000 17.92 6.88 0.00 3.02
2319 2582 0.602905 GGGGTTCTGTGACGTCTTGG 60.603 60.000 17.92 6.51 0.00 3.61
2320 2583 0.106149 GGGTTCTGTGACGTCTTGGT 59.894 55.000 17.92 0.00 0.00 3.67
2321 2584 1.499049 GGTTCTGTGACGTCTTGGTC 58.501 55.000 17.92 3.20 37.45 4.02
2322 2585 1.068741 GGTTCTGTGACGTCTTGGTCT 59.931 52.381 17.92 0.00 37.81 3.85
2323 2586 2.128035 GTTCTGTGACGTCTTGGTCTG 58.872 52.381 17.92 6.49 37.81 3.51
2324 2587 0.673985 TCTGTGACGTCTTGGTCTGG 59.326 55.000 17.92 0.00 37.81 3.86
2325 2588 0.389391 CTGTGACGTCTTGGTCTGGT 59.611 55.000 17.92 0.00 37.81 4.00
2326 2589 0.387929 TGTGACGTCTTGGTCTGGTC 59.612 55.000 17.92 0.00 37.81 4.02
2327 2590 0.663568 GTGACGTCTTGGTCTGGTCG 60.664 60.000 17.92 0.00 37.81 4.79
2328 2591 1.105167 TGACGTCTTGGTCTGGTCGT 61.105 55.000 17.92 0.00 37.81 4.34
2329 2592 0.877071 GACGTCTTGGTCTGGTCGTA 59.123 55.000 8.70 0.00 34.09 3.43
2330 2593 0.879765 ACGTCTTGGTCTGGTCGTAG 59.120 55.000 0.00 0.00 0.00 3.51
2331 2594 1.162698 CGTCTTGGTCTGGTCGTAGA 58.837 55.000 0.00 0.00 0.00 2.59
2332 2595 1.538512 CGTCTTGGTCTGGTCGTAGAA 59.461 52.381 0.00 0.00 39.69 2.10
2344 2607 3.765505 GTCGTAGAACACAAACGAAGG 57.234 47.619 0.00 0.00 46.08 3.46
2345 2608 3.374745 GTCGTAGAACACAAACGAAGGA 58.625 45.455 0.00 0.00 46.08 3.36
2346 2609 3.181178 GTCGTAGAACACAAACGAAGGAC 59.819 47.826 0.00 0.00 46.08 3.85
2347 2610 4.091770 TCGTAGAACACAAACGAAGGACG 61.092 47.826 0.00 0.00 42.18 4.79
2348 2611 0.935196 AGAACACAAACGAAGGACGC 59.065 50.000 0.00 0.00 46.94 5.19
2349 2612 0.382636 GAACACAAACGAAGGACGCG 60.383 55.000 3.53 3.53 46.94 6.01
2352 2615 0.302288 CACAAACGAAGGACGCGAAA 59.698 50.000 15.93 0.00 46.94 3.46
2656 2936 4.021981 GCCAAATCTGCTCTTGGTAAGTTT 60.022 41.667 3.01 0.00 43.45 2.66
2737 3018 2.938956 AAAGTCTGTCAAGGACTGGG 57.061 50.000 0.00 0.00 42.39 4.45
2738 3019 1.059913 AAGTCTGTCAAGGACTGGGG 58.940 55.000 0.00 0.00 42.39 4.96
2767 3048 3.817647 GGATCATTACTGGAGTGAATGGC 59.182 47.826 0.00 0.00 32.52 4.40
2869 3151 5.947228 AACAGGTTGTGTGATGTTAGATG 57.053 39.130 0.00 0.00 40.26 2.90
2910 3484 4.702131 ACCTTACAGAACTCAATGCATTCC 59.298 41.667 9.53 0.00 0.00 3.01
2941 3515 7.759489 ACTGAAAACTGCAATTACTTGGATA 57.241 32.000 0.00 0.00 31.80 2.59
2942 3516 7.820648 ACTGAAAACTGCAATTACTTGGATAG 58.179 34.615 0.00 0.00 31.80 2.08
2955 3529 9.474313 AATTACTTGGATAGAAATTGGCACTTA 57.526 29.630 0.00 0.00 0.00 2.24
3017 3598 5.237779 AGTTGTAACTGTAAACCAATCCACG 59.762 40.000 0.00 0.00 37.98 4.94
3019 3600 2.943036 ACTGTAAACCAATCCACGGT 57.057 45.000 0.00 0.00 38.85 4.83
3024 3605 2.880963 AAACCAATCCACGGTTGTTG 57.119 45.000 0.00 0.00 46.12 3.33
3059 3640 5.045286 GGATATCAGTTTCCATGCTCCCTAT 60.045 44.000 4.83 0.00 31.99 2.57
3071 3652 6.012245 TCCATGCTCCCTATGTCATGAATATT 60.012 38.462 0.00 0.00 38.77 1.28
3131 3712 1.685517 TGCTTTAACCATGTGCTTGCA 59.314 42.857 0.00 0.00 0.00 4.08
3139 3720 4.540359 ACCATGTGCTTGCACATAATTT 57.460 36.364 32.09 17.99 43.24 1.82
3148 3729 7.493971 TGTGCTTGCACATAATTTAAGTTGTTT 59.506 29.630 22.47 0.00 0.00 2.83
3250 4023 7.086685 TGTCCATATTATTCCTTTAGTCCCC 57.913 40.000 0.00 0.00 0.00 4.81
3251 4024 6.855061 TGTCCATATTATTCCTTTAGTCCCCT 59.145 38.462 0.00 0.00 0.00 4.79
3252 4025 7.168905 GTCCATATTATTCCTTTAGTCCCCTG 58.831 42.308 0.00 0.00 0.00 4.45
3253 4026 5.946377 CCATATTATTCCTTTAGTCCCCTGC 59.054 44.000 0.00 0.00 0.00 4.85
3254 4027 6.467194 CCATATTATTCCTTTAGTCCCCTGCA 60.467 42.308 0.00 0.00 0.00 4.41
3255 4028 4.938575 TTATTCCTTTAGTCCCCTGCAA 57.061 40.909 0.00 0.00 0.00 4.08
3416 4191 1.066573 AGAGTTTGACGAGAGGCCATG 60.067 52.381 5.01 0.00 39.67 3.66
3678 4699 9.099454 GATACATAGAACTAAACACTTGGAAGG 57.901 37.037 0.00 0.00 0.00 3.46
3679 4700 6.838382 ACATAGAACTAAACACTTGGAAGGT 58.162 36.000 0.00 0.00 0.00 3.50
3922 4963 6.313744 TGATGTCGTTGATCTCGTGTATAT 57.686 37.500 9.75 0.00 0.00 0.86
3966 5007 2.086869 CAGTTGAAGCCCATCGTCATT 58.913 47.619 0.00 0.00 33.34 2.57
4028 5070 2.680577 GCTTTTGCAGTGGGAATTCTG 58.319 47.619 5.23 0.00 46.58 3.02
4029 5071 2.036346 GCTTTTGCAGTGGGAATTCTGT 59.964 45.455 5.23 0.00 46.58 3.41
4030 5072 3.493176 GCTTTTGCAGTGGGAATTCTGTT 60.493 43.478 5.23 0.00 46.58 3.16
4031 5073 3.731652 TTTGCAGTGGGAATTCTGTTG 57.268 42.857 5.23 1.02 34.57 3.33
4032 5074 2.363306 TGCAGTGGGAATTCTGTTGT 57.637 45.000 5.23 0.00 34.57 3.32
4045 5113 4.558226 TTCTGTTGTAGTGATGGCAGAT 57.442 40.909 0.00 0.00 33.72 2.90
4047 5115 2.941064 CTGTTGTAGTGATGGCAGATGG 59.059 50.000 0.00 0.00 0.00 3.51
4055 5123 2.762327 GTGATGGCAGATGGGATTGTTT 59.238 45.455 0.00 0.00 0.00 2.83
4059 5127 2.971330 TGGCAGATGGGATTGTTTGTTT 59.029 40.909 0.00 0.00 0.00 2.83
4149 5229 0.953727 TGCTGAGTGGCAATGTTGAC 59.046 50.000 0.00 0.00 39.43 3.18
4182 5262 3.791993 TTGTACGTCCGTAATGTTTGC 57.208 42.857 0.46 0.00 31.86 3.68
4195 5276 5.974751 CGTAATGTTTGCCCCATAATTACAC 59.025 40.000 0.00 0.00 32.55 2.90
4198 5279 2.130272 TTGCCCCATAATTACACGCA 57.870 45.000 0.00 0.00 0.00 5.24
4243 5355 4.852134 TGGTAGCTTTGTACGTCTGTAA 57.148 40.909 0.00 0.00 30.94 2.41
4244 5356 5.395682 TGGTAGCTTTGTACGTCTGTAAT 57.604 39.130 0.00 0.00 30.94 1.89
4245 5357 5.165676 TGGTAGCTTTGTACGTCTGTAATG 58.834 41.667 0.00 0.00 30.94 1.90
4246 5358 5.166398 GGTAGCTTTGTACGTCTGTAATGT 58.834 41.667 0.00 0.00 30.94 2.71
4348 5520 5.202004 TCACCAGTAGAAATACTCCCTCTC 58.798 45.833 0.00 0.00 0.00 3.20
4355 5527 7.947890 CAGTAGAAATACTCCCTCTCTTCCTAT 59.052 40.741 0.00 0.00 0.00 2.57
4360 5532 9.984590 GAAATACTCCCTCTCTTCCTATATACT 57.015 37.037 0.00 0.00 0.00 2.12
4411 6697 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
4509 6897 5.193728 AGAAATGGAGGGGAGTATAAAGCAA 59.806 40.000 0.00 0.00 0.00 3.91
4520 6908 5.290493 AGTATAAAGCAACCGATGATCCA 57.710 39.130 0.00 0.00 0.00 3.41
4801 7190 0.895559 CAAGGAACAGGTGGGAAGGC 60.896 60.000 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.959721 AACCAGAAACTTAGTACATGTATGAAT 57.040 29.630 9.18 0.00 0.00 2.57
83 84 8.695456 CCCTTGAGGCAATAATAAAGTTGTTAT 58.305 33.333 0.00 0.00 0.00 1.89
84 85 8.062065 CCCTTGAGGCAATAATAAAGTTGTTA 57.938 34.615 0.00 0.00 0.00 2.41
85 86 6.935167 CCCTTGAGGCAATAATAAAGTTGTT 58.065 36.000 0.00 0.00 0.00 2.83
86 87 6.530019 CCCTTGAGGCAATAATAAAGTTGT 57.470 37.500 0.00 0.00 0.00 3.32
101 102 3.633986 GTGAAGGAAATATGCCCTTGAGG 59.366 47.826 12.19 0.00 42.43 3.86
102 103 3.313526 CGTGAAGGAAATATGCCCTTGAG 59.686 47.826 12.19 2.46 42.43 3.02
103 104 3.278574 CGTGAAGGAAATATGCCCTTGA 58.721 45.455 12.19 3.23 42.43 3.02
104 105 2.223572 GCGTGAAGGAAATATGCCCTTG 60.224 50.000 12.19 2.22 42.43 3.61
105 106 2.024414 GCGTGAAGGAAATATGCCCTT 58.976 47.619 8.23 8.23 44.85 3.95
106 107 1.212935 AGCGTGAAGGAAATATGCCCT 59.787 47.619 0.00 0.00 0.00 5.19
107 108 1.604278 GAGCGTGAAGGAAATATGCCC 59.396 52.381 0.00 0.00 0.00 5.36
108 109 1.604278 GGAGCGTGAAGGAAATATGCC 59.396 52.381 0.00 0.00 0.00 4.40
109 110 1.604278 GGGAGCGTGAAGGAAATATGC 59.396 52.381 0.00 0.00 0.00 3.14
110 111 2.158755 AGGGGAGCGTGAAGGAAATATG 60.159 50.000 0.00 0.00 0.00 1.78
111 112 2.127708 AGGGGAGCGTGAAGGAAATAT 58.872 47.619 0.00 0.00 0.00 1.28
112 113 1.209504 CAGGGGAGCGTGAAGGAAATA 59.790 52.381 0.00 0.00 0.00 1.40
113 114 0.035056 CAGGGGAGCGTGAAGGAAAT 60.035 55.000 0.00 0.00 0.00 2.17
114 115 1.125093 TCAGGGGAGCGTGAAGGAAA 61.125 55.000 0.00 0.00 0.00 3.13
115 116 1.535444 TCAGGGGAGCGTGAAGGAA 60.535 57.895 0.00 0.00 0.00 3.36
116 117 1.984570 CTCAGGGGAGCGTGAAGGA 60.985 63.158 0.00 0.00 33.67 3.36
117 118 2.581354 CTCAGGGGAGCGTGAAGG 59.419 66.667 0.00 0.00 33.67 3.46
183 188 2.028748 TCCTTTATATAGCGCGGGGAAC 60.029 50.000 8.83 0.00 0.00 3.62
190 195 5.394224 AGAAGACCTCCTTTATATAGCGC 57.606 43.478 0.00 0.00 34.68 5.92
192 197 6.270231 TGGGAAGAAGACCTCCTTTATATAGC 59.730 42.308 0.00 0.00 34.68 2.97
223 229 2.690653 TTTGGGGAGGAAGTGGTGCG 62.691 60.000 0.00 0.00 0.00 5.34
224 230 1.152830 TTTGGGGAGGAAGTGGTGC 59.847 57.895 0.00 0.00 0.00 5.01
229 236 1.760405 ATGGAGTTTGGGGAGGAAGT 58.240 50.000 0.00 0.00 0.00 3.01
236 243 1.273327 GAGCAACAATGGAGTTTGGGG 59.727 52.381 0.00 0.00 0.00 4.96
325 335 4.651962 GGAAGTGTAGATCTAGGCCTTCTT 59.348 45.833 12.58 13.59 0.00 2.52
414 426 1.891150 GGTGACTTCAACCGTCTAGGA 59.109 52.381 0.00 0.00 45.00 2.94
453 467 3.009723 CACCACCACGAAGCTTCAATAT 58.990 45.455 25.47 5.90 0.00 1.28
454 468 2.224426 ACACCACCACGAAGCTTCAATA 60.224 45.455 25.47 0.00 0.00 1.90
455 469 1.238439 CACCACCACGAAGCTTCAAT 58.762 50.000 25.47 10.68 0.00 2.57
490 504 2.584391 GGGCTCTCTCCACAACCGT 61.584 63.158 0.00 0.00 0.00 4.83
567 581 1.012086 CCTCACACAATGCGAGATGG 58.988 55.000 0.00 0.00 28.37 3.51
612 626 0.337428 AATGCTCCCCAAGAAGCCAT 59.663 50.000 0.00 0.00 0.00 4.40
789 811 6.072286 GCAACCTATATGATGCTAGCAACAAT 60.072 38.462 28.45 22.73 35.93 2.71
913 946 6.927294 AAAGTTGAAAGGATCGATATGGTC 57.073 37.500 0.00 0.00 0.00 4.02
939 972 0.322816 TGCAGATGCTCCCTGAAACC 60.323 55.000 6.35 0.00 42.66 3.27
950 983 2.898705 ACTAGCTTACTGTGCAGATGC 58.101 47.619 6.17 0.00 42.50 3.91
968 1001 2.183679 CCCTCTTCTCAACCAGCTACT 58.816 52.381 0.00 0.00 0.00 2.57
976 1009 3.682999 GCTGGTATTCCCCTCTTCTCAAC 60.683 52.174 0.00 0.00 0.00 3.18
1035 1068 6.678900 GCACACAGAACTCTTTCTTGTTGAAT 60.679 38.462 0.00 0.00 40.34 2.57
1040 1073 3.873952 GAGCACACAGAACTCTTTCTTGT 59.126 43.478 0.00 0.00 40.34 3.16
1046 1079 2.636893 AGGATGAGCACACAGAACTCTT 59.363 45.455 0.00 0.00 0.00 2.85
1054 1087 1.002430 GACTCCAAGGATGAGCACACA 59.998 52.381 0.00 0.00 32.98 3.72
1082 1115 4.501571 CGAGATGAATTACCGTCTTCCCAT 60.502 45.833 0.00 0.00 32.90 4.00
1124 1157 6.039941 AGGGAGATAGTTGACTCAATACTTCG 59.960 42.308 0.00 0.00 35.17 3.79
1223 1266 7.566760 TTGATTGACTTCAACTTTTCTAGCA 57.433 32.000 0.00 0.00 38.86 3.49
1246 1289 5.069119 GTGGAAGACCTTGTCCTTTCAAATT 59.931 40.000 0.00 0.00 34.77 1.82
1258 1301 2.977914 ACGATCATGTGGAAGACCTTG 58.022 47.619 0.00 0.00 37.04 3.61
1290 1333 3.486383 ACATCCAATATTAAGCCCCACG 58.514 45.455 0.00 0.00 0.00 4.94
1309 1352 9.979578 AAGTTTTACATTTGCATCTTCAATACA 57.020 25.926 0.00 0.00 0.00 2.29
1354 1397 2.159627 GCACAAGAAACCATACCTGACG 59.840 50.000 0.00 0.00 0.00 4.35
1462 1505 5.988310 TGGAGAAATGAGCAAACATCAAT 57.012 34.783 0.00 0.00 0.00 2.57
1468 1511 4.460382 TGGAGATTGGAGAAATGAGCAAAC 59.540 41.667 0.00 0.00 0.00 2.93
1523 1566 4.578871 TGAGCAAGAATCTCGATTTCCAA 58.421 39.130 5.00 0.00 33.41 3.53
1573 1617 6.482641 AGCAAAATTTGATACAACATGTGCAA 59.517 30.769 10.26 0.00 0.00 4.08
1589 1633 3.554129 GCAACCCGGTTCTAGCAAAATTT 60.554 43.478 0.00 0.00 0.00 1.82
1637 1699 5.451354 TGCCCAGTTAAAGGTTTAGAAAGT 58.549 37.500 0.00 0.00 0.00 2.66
1657 1720 2.558359 CGGGAATGGGATCTTTATTGCC 59.442 50.000 13.53 13.53 38.48 4.52
1787 1856 9.213777 TGTCATTTATCTAATCCAGGTACTTCT 57.786 33.333 0.00 0.00 34.60 2.85
1788 1857 9.832445 TTGTCATTTATCTAATCCAGGTACTTC 57.168 33.333 0.00 0.00 34.60 3.01
1840 1917 4.412796 TTGCATGTCCTGAGGATTCTAG 57.587 45.455 3.65 0.00 32.73 2.43
1923 2185 4.386652 GCTGCAGTTTTGTCATAAACATGG 59.613 41.667 16.64 0.00 39.82 3.66
1982 2244 5.782893 ATGTAGACCAGAATCTCTGTAGC 57.217 43.478 3.15 0.00 42.80 3.58
1993 2255 4.402474 ACATGATCACGAATGTAGACCAGA 59.598 41.667 0.00 0.00 35.28 3.86
2003 2265 9.778741 ACAAATATTAGGTACATGATCACGAAT 57.221 29.630 0.00 0.00 0.00 3.34
2028 2291 4.466726 ACCCTCACCTCTATCAAGTTGTAC 59.533 45.833 2.11 0.00 0.00 2.90
2033 2296 2.627217 GGGACCCTCACCTCTATCAAGT 60.627 54.545 2.09 0.00 0.00 3.16
2034 2297 2.043227 GGGACCCTCACCTCTATCAAG 58.957 57.143 2.09 0.00 0.00 3.02
2035 2298 1.688311 CGGGACCCTCACCTCTATCAA 60.688 57.143 9.41 0.00 0.00 2.57
2036 2299 0.106167 CGGGACCCTCACCTCTATCA 60.106 60.000 9.41 0.00 0.00 2.15
2038 2301 0.861155 ATCGGGACCCTCACCTCTAT 59.139 55.000 9.41 0.00 0.00 1.98
2040 2303 1.075896 GATCGGGACCCTCACCTCT 60.076 63.158 9.41 0.00 0.00 3.69
2041 2304 0.688087 AAGATCGGGACCCTCACCTC 60.688 60.000 9.41 0.00 0.00 3.85
2042 2305 0.252742 AAAGATCGGGACCCTCACCT 60.253 55.000 9.41 0.00 0.00 4.00
2043 2306 0.178301 GAAAGATCGGGACCCTCACC 59.822 60.000 9.41 0.00 0.00 4.02
2055 2318 9.220635 CGATAGTTATCATCTCATCGAAAGATC 57.779 37.037 9.95 0.00 39.59 2.75
2056 2319 8.951243 TCGATAGTTATCATCTCATCGAAAGAT 58.049 33.333 7.64 7.64 40.70 2.40
2057 2320 8.324163 TCGATAGTTATCATCTCATCGAAAGA 57.676 34.615 3.63 3.63 40.70 2.52
2058 2321 9.566530 AATCGATAGTTATCATCTCATCGAAAG 57.433 33.333 0.00 0.00 44.92 2.62
2059 2322 9.914131 AAATCGATAGTTATCATCTCATCGAAA 57.086 29.630 0.00 0.00 44.92 3.46
2061 2324 7.970614 CCAAATCGATAGTTATCATCTCATCGA 59.029 37.037 0.00 6.90 45.57 3.59
2062 2325 7.757173 ACCAAATCGATAGTTATCATCTCATCG 59.243 37.037 0.00 0.00 37.27 3.84
2067 2330 7.233553 TCTCCACCAAATCGATAGTTATCATCT 59.766 37.037 0.00 0.00 32.98 2.90
2068 2331 7.329717 GTCTCCACCAAATCGATAGTTATCATC 59.670 40.741 0.00 0.00 32.98 2.92
2069 2332 7.155328 GTCTCCACCAAATCGATAGTTATCAT 58.845 38.462 0.00 0.00 32.98 2.45
2071 2334 5.629849 CGTCTCCACCAAATCGATAGTTATC 59.370 44.000 0.00 0.00 37.40 1.75
2072 2335 5.301045 TCGTCTCCACCAAATCGATAGTTAT 59.699 40.000 0.00 0.00 37.40 1.89
2073 2336 4.641541 TCGTCTCCACCAAATCGATAGTTA 59.358 41.667 0.00 0.00 37.40 2.24
2075 2338 3.021695 TCGTCTCCACCAAATCGATAGT 58.978 45.455 0.00 0.00 37.40 2.12
2077 2340 3.021695 AGTCGTCTCCACCAAATCGATA 58.978 45.455 0.00 0.00 0.00 2.92
2078 2341 1.825474 AGTCGTCTCCACCAAATCGAT 59.175 47.619 0.00 0.00 0.00 3.59
2080 2343 2.080286 AAGTCGTCTCCACCAAATCG 57.920 50.000 0.00 0.00 0.00 3.34
2081 2344 3.186613 GTCAAAGTCGTCTCCACCAAATC 59.813 47.826 0.00 0.00 0.00 2.17
2083 2346 2.557317 GTCAAAGTCGTCTCCACCAAA 58.443 47.619 0.00 0.00 0.00 3.28
2084 2347 1.537348 CGTCAAAGTCGTCTCCACCAA 60.537 52.381 0.00 0.00 0.00 3.67
2085 2348 0.031585 CGTCAAAGTCGTCTCCACCA 59.968 55.000 0.00 0.00 0.00 4.17
2086 2349 0.313043 TCGTCAAAGTCGTCTCCACC 59.687 55.000 0.00 0.00 0.00 4.61
2087 2350 2.251893 GATCGTCAAAGTCGTCTCCAC 58.748 52.381 0.00 0.00 0.00 4.02
2088 2351 1.201647 GGATCGTCAAAGTCGTCTCCA 59.798 52.381 0.00 0.00 34.30 3.86
2089 2352 1.794437 CGGATCGTCAAAGTCGTCTCC 60.794 57.143 0.00 0.00 0.00 3.71
2090 2353 1.129998 TCGGATCGTCAAAGTCGTCTC 59.870 52.381 0.00 0.00 0.00 3.36
2093 2356 0.879765 AGTCGGATCGTCAAAGTCGT 59.120 50.000 0.00 0.00 0.00 4.34
2094 2357 2.438583 GTAGTCGGATCGTCAAAGTCG 58.561 52.381 0.00 0.00 0.00 4.18
2095 2358 2.094894 TCGTAGTCGGATCGTCAAAGTC 59.905 50.000 0.00 0.00 37.69 3.01
2096 2359 2.079158 TCGTAGTCGGATCGTCAAAGT 58.921 47.619 0.00 0.00 37.69 2.66
2097 2360 2.819422 TCGTAGTCGGATCGTCAAAG 57.181 50.000 0.00 0.00 37.69 2.77
2098 2361 2.226200 TGTTCGTAGTCGGATCGTCAAA 59.774 45.455 0.00 0.00 37.69 2.69
2100 2363 1.441738 TGTTCGTAGTCGGATCGTCA 58.558 50.000 0.00 0.00 37.69 4.35
2101 2364 2.373269 CATGTTCGTAGTCGGATCGTC 58.627 52.381 0.00 0.00 37.69 4.20
2102 2365 1.533338 GCATGTTCGTAGTCGGATCGT 60.533 52.381 0.00 0.00 37.69 3.73
2103 2366 1.121240 GCATGTTCGTAGTCGGATCG 58.879 55.000 0.00 0.00 37.69 3.69
2104 2367 2.203800 TGCATGTTCGTAGTCGGATC 57.796 50.000 0.00 0.00 37.69 3.36
2105 2368 2.540515 CTTGCATGTTCGTAGTCGGAT 58.459 47.619 0.00 0.00 37.69 4.18
2106 2369 1.403647 CCTTGCATGTTCGTAGTCGGA 60.404 52.381 0.00 0.00 37.69 4.55
2107 2370 0.999406 CCTTGCATGTTCGTAGTCGG 59.001 55.000 0.00 0.00 37.69 4.79
2108 2371 1.654105 GTCCTTGCATGTTCGTAGTCG 59.346 52.381 0.00 0.00 38.55 4.18
2109 2372 1.654105 CGTCCTTGCATGTTCGTAGTC 59.346 52.381 0.00 0.00 0.00 2.59
2110 2373 1.000506 ACGTCCTTGCATGTTCGTAGT 59.999 47.619 14.17 0.00 0.00 2.73
2111 2374 1.654105 GACGTCCTTGCATGTTCGTAG 59.346 52.381 3.51 0.00 0.00 3.51
2112 2375 1.705256 GACGTCCTTGCATGTTCGTA 58.295 50.000 3.51 0.00 0.00 3.43
2113 2376 1.282248 CGACGTCCTTGCATGTTCGT 61.282 55.000 10.58 15.17 0.00 3.85
2114 2377 1.282248 ACGACGTCCTTGCATGTTCG 61.282 55.000 10.58 10.42 0.00 3.95
2115 2378 0.163788 CACGACGTCCTTGCATGTTC 59.836 55.000 10.58 0.00 0.00 3.18
2116 2379 1.841663 GCACGACGTCCTTGCATGTT 61.842 55.000 24.78 0.00 36.22 2.71
2117 2380 2.317609 GCACGACGTCCTTGCATGT 61.318 57.895 24.78 7.86 36.22 3.21
2118 2381 2.476051 GCACGACGTCCTTGCATG 59.524 61.111 24.78 7.26 36.22 4.06
2119 2382 2.731691 AAGGCACGACGTCCTTGCAT 62.732 55.000 28.50 22.77 40.90 3.96
2120 2383 2.089887 TAAGGCACGACGTCCTTGCA 62.090 55.000 28.50 12.93 42.29 4.08
2121 2384 1.352156 CTAAGGCACGACGTCCTTGC 61.352 60.000 27.53 22.69 42.29 4.01
2122 2385 1.352156 GCTAAGGCACGACGTCCTTG 61.352 60.000 27.53 21.08 42.29 3.61
2123 2386 1.080025 GCTAAGGCACGACGTCCTT 60.080 57.895 24.89 24.89 44.32 3.36
2124 2387 2.273179 TGCTAAGGCACGACGTCCT 61.273 57.895 10.58 11.66 44.28 3.85
2125 2388 2.260434 TGCTAAGGCACGACGTCC 59.740 61.111 10.58 2.76 44.28 4.79
2140 2403 1.810151 TGGAGTTGGTTTAGCGATTGC 59.190 47.619 0.00 0.00 43.24 3.56
2141 2404 3.751175 TCTTGGAGTTGGTTTAGCGATTG 59.249 43.478 0.00 0.00 0.00 2.67
2142 2405 4.015872 TCTTGGAGTTGGTTTAGCGATT 57.984 40.909 0.00 0.00 0.00 3.34
2143 2406 3.695830 TCTTGGAGTTGGTTTAGCGAT 57.304 42.857 0.00 0.00 0.00 4.58
2144 2407 3.181458 ACTTCTTGGAGTTGGTTTAGCGA 60.181 43.478 0.00 0.00 0.00 4.93
2145 2408 3.139077 ACTTCTTGGAGTTGGTTTAGCG 58.861 45.455 0.00 0.00 0.00 4.26
2146 2409 6.819397 ATAACTTCTTGGAGTTGGTTTAGC 57.181 37.500 4.66 0.00 39.99 3.09
2147 2410 8.290325 GTCAATAACTTCTTGGAGTTGGTTTAG 58.710 37.037 4.66 0.00 39.99 1.85
2148 2411 7.229907 GGTCAATAACTTCTTGGAGTTGGTTTA 59.770 37.037 4.66 0.00 39.99 2.01
2149 2412 6.040504 GGTCAATAACTTCTTGGAGTTGGTTT 59.959 38.462 4.66 0.00 39.99 3.27
2150 2413 5.535030 GGTCAATAACTTCTTGGAGTTGGTT 59.465 40.000 4.66 0.00 39.99 3.67
2151 2414 5.070685 GGTCAATAACTTCTTGGAGTTGGT 58.929 41.667 4.66 0.00 39.99 3.67
2152 2415 5.048713 GTGGTCAATAACTTCTTGGAGTTGG 60.049 44.000 4.66 0.00 39.99 3.77
2153 2416 5.334105 CGTGGTCAATAACTTCTTGGAGTTG 60.334 44.000 4.66 0.00 39.99 3.16
2154 2417 4.755123 CGTGGTCAATAACTTCTTGGAGTT 59.245 41.667 0.00 0.00 42.27 3.01
2155 2418 4.315803 CGTGGTCAATAACTTCTTGGAGT 58.684 43.478 0.00 0.00 0.00 3.85
2156 2419 3.125316 GCGTGGTCAATAACTTCTTGGAG 59.875 47.826 0.00 0.00 0.00 3.86
2157 2420 3.071479 GCGTGGTCAATAACTTCTTGGA 58.929 45.455 0.00 0.00 0.00 3.53
2158 2421 2.161609 GGCGTGGTCAATAACTTCTTGG 59.838 50.000 0.00 0.00 0.00 3.61
2159 2422 2.159707 CGGCGTGGTCAATAACTTCTTG 60.160 50.000 0.00 0.00 0.00 3.02
2160 2423 2.073816 CGGCGTGGTCAATAACTTCTT 58.926 47.619 0.00 0.00 0.00 2.52
2161 2424 1.674817 CCGGCGTGGTCAATAACTTCT 60.675 52.381 6.01 0.00 0.00 2.85
2162 2425 0.725117 CCGGCGTGGTCAATAACTTC 59.275 55.000 6.01 0.00 0.00 3.01
2163 2426 0.322322 TCCGGCGTGGTCAATAACTT 59.678 50.000 6.01 0.00 39.52 2.66
2164 2427 0.108329 CTCCGGCGTGGTCAATAACT 60.108 55.000 6.01 0.00 39.52 2.24
2165 2428 1.702491 GCTCCGGCGTGGTCAATAAC 61.702 60.000 6.01 0.00 39.52 1.89
2166 2429 1.448893 GCTCCGGCGTGGTCAATAA 60.449 57.895 6.01 0.00 39.52 1.40
2167 2430 1.966901 ATGCTCCGGCGTGGTCAATA 61.967 55.000 6.01 0.00 42.25 1.90
2168 2431 1.966901 TATGCTCCGGCGTGGTCAAT 61.967 55.000 6.01 0.00 42.25 2.57
2169 2432 2.173758 TTATGCTCCGGCGTGGTCAA 62.174 55.000 6.01 0.00 42.25 3.18
2170 2433 1.966901 ATTATGCTCCGGCGTGGTCA 61.967 55.000 6.01 0.00 42.25 4.02
2171 2434 1.222115 GATTATGCTCCGGCGTGGTC 61.222 60.000 6.01 0.00 42.25 4.02
2172 2435 1.227556 GATTATGCTCCGGCGTGGT 60.228 57.895 6.01 0.00 42.25 4.16
2173 2436 0.813610 TTGATTATGCTCCGGCGTGG 60.814 55.000 6.01 0.00 42.25 4.94
2174 2437 0.304705 GTTGATTATGCTCCGGCGTG 59.695 55.000 6.01 0.00 42.25 5.34
2175 2438 0.814010 GGTTGATTATGCTCCGGCGT 60.814 55.000 6.01 0.00 42.25 5.68
2176 2439 0.532862 AGGTTGATTATGCTCCGGCG 60.533 55.000 0.00 0.00 42.25 6.46
2177 2440 0.947244 CAGGTTGATTATGCTCCGGC 59.053 55.000 0.00 0.00 39.26 6.13
2178 2441 2.213499 GTCAGGTTGATTATGCTCCGG 58.787 52.381 0.00 0.00 0.00 5.14
2179 2442 2.213499 GGTCAGGTTGATTATGCTCCG 58.787 52.381 0.00 0.00 0.00 4.63
2180 2443 2.945668 GTGGTCAGGTTGATTATGCTCC 59.054 50.000 0.00 0.00 0.00 4.70
2181 2444 2.609459 CGTGGTCAGGTTGATTATGCTC 59.391 50.000 0.00 0.00 0.00 4.26
2182 2445 2.236146 TCGTGGTCAGGTTGATTATGCT 59.764 45.455 0.00 0.00 0.00 3.79
2183 2446 2.627945 TCGTGGTCAGGTTGATTATGC 58.372 47.619 0.00 0.00 0.00 3.14
2184 2447 3.623060 CCTTCGTGGTCAGGTTGATTATG 59.377 47.826 0.00 0.00 0.00 1.90
2185 2448 3.873910 CCTTCGTGGTCAGGTTGATTAT 58.126 45.455 0.00 0.00 0.00 1.28
2186 2449 3.328382 CCTTCGTGGTCAGGTTGATTA 57.672 47.619 0.00 0.00 0.00 1.75
2187 2450 2.185004 CCTTCGTGGTCAGGTTGATT 57.815 50.000 0.00 0.00 0.00 2.57
2188 2451 3.935993 CCTTCGTGGTCAGGTTGAT 57.064 52.632 0.00 0.00 0.00 2.57
2198 2461 2.280628 GCAGGAAATAGACCTTCGTGG 58.719 52.381 7.21 0.00 38.50 4.94
2199 2462 2.673368 GTGCAGGAAATAGACCTTCGTG 59.327 50.000 0.00 1.88 40.15 4.35
2200 2463 2.354805 GGTGCAGGAAATAGACCTTCGT 60.355 50.000 0.00 0.00 35.35 3.85
2201 2464 2.280628 GGTGCAGGAAATAGACCTTCG 58.719 52.381 0.00 0.00 35.35 3.79
2202 2465 2.026262 TGGGTGCAGGAAATAGACCTTC 60.026 50.000 0.00 0.00 35.35 3.46
2203 2466 1.992557 TGGGTGCAGGAAATAGACCTT 59.007 47.619 0.00 0.00 35.35 3.50
2204 2467 1.668826 TGGGTGCAGGAAATAGACCT 58.331 50.000 0.00 0.00 38.40 3.85
2205 2468 2.492088 GTTTGGGTGCAGGAAATAGACC 59.508 50.000 0.00 0.00 0.00 3.85
2206 2469 2.161609 CGTTTGGGTGCAGGAAATAGAC 59.838 50.000 0.00 0.00 0.00 2.59
2207 2470 2.039216 TCGTTTGGGTGCAGGAAATAGA 59.961 45.455 0.00 0.00 0.00 1.98
2208 2471 2.432444 TCGTTTGGGTGCAGGAAATAG 58.568 47.619 0.00 0.00 0.00 1.73
2209 2472 2.570415 TCGTTTGGGTGCAGGAAATA 57.430 45.000 0.00 0.00 0.00 1.40
2210 2473 1.613437 CTTCGTTTGGGTGCAGGAAAT 59.387 47.619 0.00 0.00 0.00 2.17
2211 2474 1.028905 CTTCGTTTGGGTGCAGGAAA 58.971 50.000 0.00 0.00 0.00 3.13
2212 2475 0.181587 TCTTCGTTTGGGTGCAGGAA 59.818 50.000 0.00 0.00 0.00 3.36
2213 2476 0.181587 TTCTTCGTTTGGGTGCAGGA 59.818 50.000 0.00 0.00 0.00 3.86
2214 2477 0.310854 GTTCTTCGTTTGGGTGCAGG 59.689 55.000 0.00 0.00 0.00 4.85
2215 2478 1.021202 TGTTCTTCGTTTGGGTGCAG 58.979 50.000 0.00 0.00 0.00 4.41
2216 2479 1.403679 CTTGTTCTTCGTTTGGGTGCA 59.596 47.619 0.00 0.00 0.00 4.57
2217 2480 1.404035 ACTTGTTCTTCGTTTGGGTGC 59.596 47.619 0.00 0.00 0.00 5.01
2218 2481 4.573201 TCTTACTTGTTCTTCGTTTGGGTG 59.427 41.667 0.00 0.00 0.00 4.61
2219 2482 4.773013 TCTTACTTGTTCTTCGTTTGGGT 58.227 39.130 0.00 0.00 0.00 4.51
2220 2483 5.744666 TTCTTACTTGTTCTTCGTTTGGG 57.255 39.130 0.00 0.00 0.00 4.12
2221 2484 9.724839 TTAATTTCTTACTTGTTCTTCGTTTGG 57.275 29.630 0.00 0.00 0.00 3.28
2276 2539 9.710900 CCCACTTTCATTAATAAAGCTTTTCTT 57.289 29.630 18.47 13.55 37.44 2.52
2277 2540 8.314021 CCCCACTTTCATTAATAAAGCTTTTCT 58.686 33.333 18.47 7.46 37.44 2.52
2278 2541 8.094548 ACCCCACTTTCATTAATAAAGCTTTTC 58.905 33.333 18.47 0.00 37.44 2.29
2279 2542 7.973402 ACCCCACTTTCATTAATAAAGCTTTT 58.027 30.769 18.47 2.42 37.44 2.27
2280 2543 7.553504 ACCCCACTTTCATTAATAAAGCTTT 57.446 32.000 17.30 17.30 37.44 3.51
2281 2544 7.454694 AGAACCCCACTTTCATTAATAAAGCTT 59.545 33.333 0.00 0.00 37.44 3.74
2282 2545 6.954102 AGAACCCCACTTTCATTAATAAAGCT 59.046 34.615 13.08 0.00 37.44 3.74
2283 2546 7.035612 CAGAACCCCACTTTCATTAATAAAGC 58.964 38.462 13.08 0.00 37.44 3.51
2284 2547 8.028938 CACAGAACCCCACTTTCATTAATAAAG 58.971 37.037 12.20 12.20 39.38 1.85
2285 2548 7.726291 TCACAGAACCCCACTTTCATTAATAAA 59.274 33.333 0.00 0.00 0.00 1.40
2286 2549 7.175990 GTCACAGAACCCCACTTTCATTAATAA 59.824 37.037 0.00 0.00 0.00 1.40
2287 2550 6.657541 GTCACAGAACCCCACTTTCATTAATA 59.342 38.462 0.00 0.00 0.00 0.98
2288 2551 5.476945 GTCACAGAACCCCACTTTCATTAAT 59.523 40.000 0.00 0.00 0.00 1.40
2289 2552 4.825085 GTCACAGAACCCCACTTTCATTAA 59.175 41.667 0.00 0.00 0.00 1.40
2290 2553 4.394729 GTCACAGAACCCCACTTTCATTA 58.605 43.478 0.00 0.00 0.00 1.90
2291 2554 3.222603 GTCACAGAACCCCACTTTCATT 58.777 45.455 0.00 0.00 0.00 2.57
2292 2555 2.810400 CGTCACAGAACCCCACTTTCAT 60.810 50.000 0.00 0.00 0.00 2.57
2293 2556 1.474320 CGTCACAGAACCCCACTTTCA 60.474 52.381 0.00 0.00 0.00 2.69
2294 2557 1.226746 CGTCACAGAACCCCACTTTC 58.773 55.000 0.00 0.00 0.00 2.62
2295 2558 0.544697 ACGTCACAGAACCCCACTTT 59.455 50.000 0.00 0.00 0.00 2.66
2296 2559 0.106149 GACGTCACAGAACCCCACTT 59.894 55.000 11.55 0.00 0.00 3.16
2297 2560 0.759436 AGACGTCACAGAACCCCACT 60.759 55.000 19.50 0.00 0.00 4.00
2298 2561 0.106149 AAGACGTCACAGAACCCCAC 59.894 55.000 19.50 0.00 0.00 4.61
2299 2562 0.105964 CAAGACGTCACAGAACCCCA 59.894 55.000 19.50 0.00 0.00 4.96
2300 2563 0.602905 CCAAGACGTCACAGAACCCC 60.603 60.000 19.50 0.00 0.00 4.95
2301 2564 0.106149 ACCAAGACGTCACAGAACCC 59.894 55.000 19.50 0.00 0.00 4.11
2302 2565 1.068741 AGACCAAGACGTCACAGAACC 59.931 52.381 19.50 0.46 35.07 3.62
2303 2566 2.128035 CAGACCAAGACGTCACAGAAC 58.872 52.381 19.50 4.56 35.07 3.01
2304 2567 1.068588 CCAGACCAAGACGTCACAGAA 59.931 52.381 19.50 0.00 35.07 3.02
2305 2568 0.673985 CCAGACCAAGACGTCACAGA 59.326 55.000 19.50 0.00 35.07 3.41
2306 2569 0.389391 ACCAGACCAAGACGTCACAG 59.611 55.000 19.50 7.75 35.07 3.66
2307 2570 0.387929 GACCAGACCAAGACGTCACA 59.612 55.000 19.50 0.00 35.07 3.58
2308 2571 0.663568 CGACCAGACCAAGACGTCAC 60.664 60.000 19.50 3.64 35.07 3.67
2309 2572 1.105167 ACGACCAGACCAAGACGTCA 61.105 55.000 19.50 0.00 35.07 4.35
2310 2573 0.877071 TACGACCAGACCAAGACGTC 59.123 55.000 7.70 7.70 35.66 4.34
2311 2574 0.879765 CTACGACCAGACCAAGACGT 59.120 55.000 0.00 0.00 37.68 4.34
2312 2575 1.162698 TCTACGACCAGACCAAGACG 58.837 55.000 0.00 0.00 0.00 4.18
2313 2576 2.295349 TGTTCTACGACCAGACCAAGAC 59.705 50.000 0.00 0.00 0.00 3.01
2314 2577 2.295349 GTGTTCTACGACCAGACCAAGA 59.705 50.000 0.00 0.00 0.00 3.02
2315 2578 2.035449 TGTGTTCTACGACCAGACCAAG 59.965 50.000 0.00 0.00 0.00 3.61
2316 2579 2.033372 TGTGTTCTACGACCAGACCAA 58.967 47.619 0.00 0.00 0.00 3.67
2317 2580 1.694844 TGTGTTCTACGACCAGACCA 58.305 50.000 0.00 0.00 0.00 4.02
2318 2581 2.798847 GTTTGTGTTCTACGACCAGACC 59.201 50.000 0.00 0.00 0.00 3.85
2319 2582 2.470257 CGTTTGTGTTCTACGACCAGAC 59.530 50.000 0.00 0.00 37.47 3.51
2320 2583 2.358582 TCGTTTGTGTTCTACGACCAGA 59.641 45.455 0.00 0.00 39.15 3.86
2321 2584 2.734670 TCGTTTGTGTTCTACGACCAG 58.265 47.619 0.00 0.00 39.15 4.00
2322 2585 2.867287 TCGTTTGTGTTCTACGACCA 57.133 45.000 0.00 0.00 39.15 4.02
2323 2586 2.473984 CCTTCGTTTGTGTTCTACGACC 59.526 50.000 0.00 0.00 43.16 4.79
2324 2587 3.181178 GTCCTTCGTTTGTGTTCTACGAC 59.819 47.826 0.00 0.00 43.16 4.34
2325 2588 3.374745 GTCCTTCGTTTGTGTTCTACGA 58.625 45.455 0.00 0.00 41.95 3.43
2326 2589 2.152489 CGTCCTTCGTTTGTGTTCTACG 59.848 50.000 0.00 0.00 36.67 3.51
2327 2590 2.097056 GCGTCCTTCGTTTGTGTTCTAC 60.097 50.000 0.00 0.00 42.13 2.59
2328 2591 2.129607 GCGTCCTTCGTTTGTGTTCTA 58.870 47.619 0.00 0.00 42.13 2.10
2329 2592 0.935196 GCGTCCTTCGTTTGTGTTCT 59.065 50.000 0.00 0.00 42.13 3.01
2330 2593 0.382636 CGCGTCCTTCGTTTGTGTTC 60.383 55.000 0.00 0.00 42.13 3.18
2331 2594 0.806884 TCGCGTCCTTCGTTTGTGTT 60.807 50.000 5.77 0.00 42.13 3.32
2332 2595 0.806884 TTCGCGTCCTTCGTTTGTGT 60.807 50.000 5.77 0.00 42.13 3.72
2333 2596 0.302288 TTTCGCGTCCTTCGTTTGTG 59.698 50.000 5.77 0.00 42.13 3.33
2334 2597 1.070175 CATTTCGCGTCCTTCGTTTGT 60.070 47.619 5.77 0.00 42.13 2.83
2335 2598 1.193650 TCATTTCGCGTCCTTCGTTTG 59.806 47.619 5.77 0.00 42.13 2.93
2336 2599 1.193874 GTCATTTCGCGTCCTTCGTTT 59.806 47.619 5.77 0.00 42.13 3.60
2337 2600 0.788391 GTCATTTCGCGTCCTTCGTT 59.212 50.000 5.77 0.00 42.13 3.85
2338 2601 0.319211 TGTCATTTCGCGTCCTTCGT 60.319 50.000 5.77 0.00 42.13 3.85
2339 2602 0.787787 TTGTCATTTCGCGTCCTTCG 59.212 50.000 5.77 0.00 43.12 3.79
2340 2603 1.798813 ACTTGTCATTTCGCGTCCTTC 59.201 47.619 5.77 0.00 0.00 3.46
2341 2604 1.878953 ACTTGTCATTTCGCGTCCTT 58.121 45.000 5.77 0.00 0.00 3.36
2342 2605 1.878953 AACTTGTCATTTCGCGTCCT 58.121 45.000 5.77 0.00 0.00 3.85
2343 2606 2.991190 TCTAACTTGTCATTTCGCGTCC 59.009 45.455 5.77 0.00 0.00 4.79
2344 2607 3.181533 GGTCTAACTTGTCATTTCGCGTC 60.182 47.826 5.77 0.00 0.00 5.19
2345 2608 2.735134 GGTCTAACTTGTCATTTCGCGT 59.265 45.455 5.77 0.00 0.00 6.01
2346 2609 2.993899 AGGTCTAACTTGTCATTTCGCG 59.006 45.455 0.00 0.00 0.00 5.87
2347 2610 5.358298 AAAGGTCTAACTTGTCATTTCGC 57.642 39.130 0.00 0.00 0.00 4.70
2348 2611 5.106673 GGGAAAGGTCTAACTTGTCATTTCG 60.107 44.000 0.00 0.00 0.00 3.46
2349 2612 5.768164 TGGGAAAGGTCTAACTTGTCATTTC 59.232 40.000 0.00 0.00 0.00 2.17
2352 2615 4.993705 TGGGAAAGGTCTAACTTGTCAT 57.006 40.909 0.00 0.00 0.00 3.06
2412 2675 7.450074 TCACAAAGTGAAGGTCATAACTACAT 58.550 34.615 0.00 0.00 39.78 2.29
2520 2786 9.421806 TCAAAAACATGTAGCAATAGAATTTGG 57.578 29.630 0.00 0.00 0.00 3.28
2530 2796 3.636300 AGGCTGTCAAAAACATGTAGCAA 59.364 39.130 14.63 0.00 37.23 3.91
2610 2889 3.673902 TCTTCAAATGTTGAGCGGATGA 58.326 40.909 0.00 0.00 41.38 2.92
2612 2891 3.181493 GCATCTTCAAATGTTGAGCGGAT 60.181 43.478 0.00 0.00 41.38 4.18
2656 2936 6.127869 TGTTTTGTGACGAAAGAAATGGAAGA 60.128 34.615 0.00 0.00 0.00 2.87
2737 3018 6.098409 TCACTCCAGTAATGATCCTAACTTCC 59.902 42.308 0.00 0.00 0.00 3.46
2738 3019 7.113658 TCACTCCAGTAATGATCCTAACTTC 57.886 40.000 0.00 0.00 0.00 3.01
2767 3048 4.797868 TCTGCAACAAAAATGTTTGAGTCG 59.202 37.500 15.43 1.78 45.99 4.18
2856 3138 7.418337 AGTATGGTGTACATCTAACATCACA 57.582 36.000 7.81 0.00 40.59 3.58
2895 3469 3.614092 TCAGAGGGAATGCATTGAGTTC 58.386 45.455 18.59 8.95 0.00 3.01
2910 3484 4.843220 ATTGCAGTTTTCAGTTCAGAGG 57.157 40.909 0.00 0.00 0.00 3.69
2941 3515 6.625532 ATTTTCCCATAAGTGCCAATTTCT 57.374 33.333 0.00 0.00 0.00 2.52
2942 3516 6.316140 GGAATTTTCCCATAAGTGCCAATTTC 59.684 38.462 0.00 0.00 41.62 2.17
3017 3598 3.194005 TCCTCTGACACTTCAACAACC 57.806 47.619 0.00 0.00 0.00 3.77
3019 3600 6.014242 ACTGATATCCTCTGACACTTCAACAA 60.014 38.462 0.00 0.00 0.00 2.83
3024 3605 6.045955 GGAAACTGATATCCTCTGACACTTC 58.954 44.000 0.00 0.00 32.75 3.01
3071 3652 5.075493 TGCTCTGAGCTCTACATATGATGA 58.925 41.667 28.04 6.02 42.97 2.92
3139 3720 9.601971 GTAATGCGTCAATTCTTAAACAACTTA 57.398 29.630 0.00 0.00 0.00 2.24
3222 3804 9.628500 GGACTAAAGGAATAATATGGACAGTTT 57.372 33.333 0.00 0.00 0.00 2.66
3252 4025 4.553323 AGATGAAATGAACTTGCAGTTGC 58.447 39.130 6.31 0.00 38.80 4.17
3253 4026 6.210796 TCAAGATGAAATGAACTTGCAGTTG 58.789 36.000 6.31 0.00 38.80 3.16
3254 4027 6.395426 TCAAGATGAAATGAACTTGCAGTT 57.605 33.333 0.00 1.82 41.95 3.16
3255 4028 6.585695 ATCAAGATGAAATGAACTTGCAGT 57.414 33.333 0.00 0.00 39.33 4.40
3416 4191 1.670811 CAGATCCCGCCACAAACATAC 59.329 52.381 0.00 0.00 0.00 2.39
3535 4310 4.535526 TCATTGAAACTCCATCTCGTGA 57.464 40.909 0.00 0.00 0.00 4.35
3539 4314 6.998968 ACTGAATCATTGAAACTCCATCTC 57.001 37.500 0.00 0.00 0.00 2.75
3651 4671 8.697846 TTCCAAGTGTTTAGTTCTATGTATCG 57.302 34.615 0.00 0.00 0.00 2.92
3659 4680 6.496144 ACTACCTTCCAAGTGTTTAGTTCT 57.504 37.500 0.00 0.00 0.00 3.01
3666 4687 5.542635 TCATGTCTACTACCTTCCAAGTGTT 59.457 40.000 0.00 0.00 0.00 3.32
3667 4688 5.084519 TCATGTCTACTACCTTCCAAGTGT 58.915 41.667 0.00 0.00 0.00 3.55
3678 4699 6.423905 TGCACAACTTTCTTCATGTCTACTAC 59.576 38.462 0.00 0.00 0.00 2.73
3679 4700 6.521162 TGCACAACTTTCTTCATGTCTACTA 58.479 36.000 0.00 0.00 0.00 1.82
3798 4833 4.400961 GCGTGCCCTCAGAGCCTT 62.401 66.667 0.00 0.00 0.00 4.35
3922 4963 3.819902 TCATGACATTGTGCTAAAGTGCA 59.180 39.130 0.00 0.00 41.05 4.57
3966 5007 1.217942 TGGGGCTATAGCAGAGTGAGA 59.782 52.381 25.53 0.00 44.36 3.27
4011 5053 3.030291 ACAACAGAATTCCCACTGCAAA 58.970 40.909 0.65 0.00 37.61 3.68
4019 5061 3.378427 GCCATCACTACAACAGAATTCCC 59.622 47.826 0.65 0.00 0.00 3.97
4020 5062 4.009675 TGCCATCACTACAACAGAATTCC 58.990 43.478 0.65 0.00 0.00 3.01
4021 5063 4.937620 TCTGCCATCACTACAACAGAATTC 59.062 41.667 0.00 0.00 31.60 2.17
4022 5064 4.910195 TCTGCCATCACTACAACAGAATT 58.090 39.130 0.00 0.00 31.60 2.17
4023 5065 4.558226 TCTGCCATCACTACAACAGAAT 57.442 40.909 0.00 0.00 31.60 2.40
4024 5066 4.256110 CATCTGCCATCACTACAACAGAA 58.744 43.478 0.00 0.00 37.66 3.02
4025 5067 3.369787 CCATCTGCCATCACTACAACAGA 60.370 47.826 0.00 0.00 38.42 3.41
4026 5068 2.941064 CCATCTGCCATCACTACAACAG 59.059 50.000 0.00 0.00 0.00 3.16
4027 5069 2.356022 CCCATCTGCCATCACTACAACA 60.356 50.000 0.00 0.00 0.00 3.33
4028 5070 2.092968 TCCCATCTGCCATCACTACAAC 60.093 50.000 0.00 0.00 0.00 3.32
4029 5071 2.195727 TCCCATCTGCCATCACTACAA 58.804 47.619 0.00 0.00 0.00 2.41
4030 5072 1.878211 TCCCATCTGCCATCACTACA 58.122 50.000 0.00 0.00 0.00 2.74
4031 5073 3.144506 CAATCCCATCTGCCATCACTAC 58.855 50.000 0.00 0.00 0.00 2.73
4032 5074 2.779430 ACAATCCCATCTGCCATCACTA 59.221 45.455 0.00 0.00 0.00 2.74
4045 5113 4.956700 TGGAGTAACAAACAAACAATCCCA 59.043 37.500 0.00 0.00 0.00 4.37
4047 5115 5.983118 CCTTGGAGTAACAAACAAACAATCC 59.017 40.000 0.00 0.00 0.00 3.01
4055 5123 7.913789 ACTGTATATCCTTGGAGTAACAAACA 58.086 34.615 0.00 0.00 0.00 2.83
4059 5127 5.889853 ACGACTGTATATCCTTGGAGTAACA 59.110 40.000 0.00 0.00 0.00 2.41
4149 5229 2.671396 GACGTACAAAGCTACCATGTGG 59.329 50.000 0.00 0.00 42.17 4.17
4182 5262 3.738982 TCATCTGCGTGTAATTATGGGG 58.261 45.455 0.00 0.00 0.00 4.96
4195 5276 0.806868 AACATTGCCACTCATCTGCG 59.193 50.000 0.00 0.00 0.00 5.18
4198 5279 2.089980 GCTCAACATTGCCACTCATCT 58.910 47.619 0.00 0.00 0.00 2.90
4245 5357 7.042523 AGCTGCATTCTTTTTATGTTGACAAAC 60.043 33.333 1.02 0.00 36.78 2.93
4246 5358 6.985645 AGCTGCATTCTTTTTATGTTGACAAA 59.014 30.769 1.02 0.00 0.00 2.83
4381 6665 4.830600 TGCTCCGTATGTAGTCCATATTGA 59.169 41.667 0.00 0.00 38.29 2.57
4474 6761 5.012893 CCCCTCCATTTCTGAATATAAGCC 58.987 45.833 0.00 0.00 0.00 4.35
4484 6774 5.066593 GCTTTATACTCCCCTCCATTTCTG 58.933 45.833 0.00 0.00 0.00 3.02
4509 6897 2.233271 GGAATGCATTGGATCATCGGT 58.767 47.619 18.59 0.00 0.00 4.69
4520 6908 8.595362 AGATGAATCATATGATGGAATGCATT 57.405 30.769 18.85 12.83 34.49 3.56
4801 7190 4.761739 TGCTTGTACAATTCTTCTGAAGGG 59.238 41.667 16.83 7.46 35.44 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.