Multiple sequence alignment - TraesCS2D01G170700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G170700 chr2D 100.000 6112 0 0 1 6112 114555859 114549748 0.000000e+00 11287.0
1 TraesCS2D01G170700 chr2D 84.470 528 31 24 416 931 114647602 114647114 1.990000e-129 473.0
2 TraesCS2D01G170700 chr2D 84.524 252 27 9 174 422 114649269 114649027 7.920000e-59 239.0
3 TraesCS2D01G170700 chr2D 72.609 847 164 46 3749 4548 591030058 591030883 3.710000e-52 217.0
4 TraesCS2D01G170700 chr2A 97.013 2678 63 12 2688 5354 116016859 116014188 0.000000e+00 4486.0
5 TraesCS2D01G170700 chr2A 91.027 2307 110 35 358 2602 116019399 116017128 0.000000e+00 3024.0
6 TraesCS2D01G170700 chr2A 73.947 641 123 34 3750 4364 726032410 726033032 1.030000e-52 219.0
7 TraesCS2D01G170700 chr2A 97.619 42 1 0 5669 5710 116014085 116014044 8.500000e-09 73.1
8 TraesCS2D01G170700 chr2A 79.091 110 19 3 1001 1108 765762568 765762461 8.500000e-09 73.1
9 TraesCS2D01G170700 chr2A 83.333 78 9 3 1033 1108 765799570 765799495 1.100000e-07 69.4
10 TraesCS2D01G170700 chr2B 90.863 3360 222 45 2039 5354 165118686 165115368 0.000000e+00 4425.0
11 TraesCS2D01G170700 chr2B 87.447 1657 105 42 426 2038 165120380 165118783 0.000000e+00 1812.0
12 TraesCS2D01G170700 chr2B 87.871 371 34 7 1 364 165122004 165121638 5.660000e-115 425.0
13 TraesCS2D01G170700 chr2B 89.610 77 8 0 5563 5639 695443356 695443432 1.400000e-16 99.0
14 TraesCS2D01G170700 chr2B 89.610 77 8 0 5563 5639 736388663 736388739 1.400000e-16 99.0
15 TraesCS2D01G170700 chr2B 89.474 76 8 0 5563 5638 210267629 210267704 5.040000e-16 97.1
16 TraesCS2D01G170700 chr2B 95.000 60 2 1 5652 5710 165115355 165115296 6.520000e-15 93.5
17 TraesCS2D01G170700 chr2B 78.448 116 21 3 995 1108 801162358 801162471 8.500000e-09 73.1
18 TraesCS2D01G170700 chr5D 88.591 149 16 1 5362 5509 496213328 496213180 4.870000e-41 180.0
19 TraesCS2D01G170700 chr5D 86.093 151 20 1 5360 5509 74150027 74150177 1.760000e-35 161.0
20 TraesCS2D01G170700 chr4B 88.571 140 14 2 5362 5500 408607169 408607307 1.050000e-37 169.0
21 TraesCS2D01G170700 chr5B 90.164 122 12 0 5362 5483 57923177 57923298 6.340000e-35 159.0
22 TraesCS2D01G170700 chr5B 89.610 77 8 0 5563 5639 674377690 674377766 1.400000e-16 99.0
23 TraesCS2D01G170700 chr3B 85.235 149 21 1 5362 5509 728816162 728816310 1.060000e-32 152.0
24 TraesCS2D01G170700 chr3B 90.541 74 7 0 5566 5639 784169945 784169872 1.400000e-16 99.0
25 TraesCS2D01G170700 chr3B 89.333 75 8 0 5566 5640 59236585 59236511 1.810000e-15 95.3
26 TraesCS2D01G170700 chr1B 84.868 152 22 1 5362 5512 94009586 94009435 1.060000e-32 152.0
27 TraesCS2D01G170700 chr1B 87.356 87 8 2 5566 5649 589500630 589500544 5.040000e-16 97.1
28 TraesCS2D01G170700 chr5A 84.768 151 22 1 5362 5511 44090833 44090983 3.820000e-32 150.0
29 TraesCS2D01G170700 chr1D 84.211 152 23 1 5362 5512 13009339 13009188 4.940000e-31 147.0
30 TraesCS2D01G170700 chr3D 83.553 152 24 1 5362 5512 537680176 537680025 2.300000e-29 141.0
31 TraesCS2D01G170700 chr7B 89.744 78 8 0 5563 5640 742229801 742229878 3.900000e-17 100.0
32 TraesCS2D01G170700 chr7B 89.474 76 8 0 5563 5638 24414541 24414616 5.040000e-16 97.1
33 TraesCS2D01G170700 chr7B 93.878 49 3 0 5513 5561 462055115 462055067 2.360000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G170700 chr2D 114549748 114555859 6111 True 11287.000 11287 100.000000 1 6112 1 chr2D.!!$R1 6111
1 TraesCS2D01G170700 chr2D 114647114 114649269 2155 True 356.000 473 84.497000 174 931 2 chr2D.!!$R2 757
2 TraesCS2D01G170700 chr2D 591030058 591030883 825 False 217.000 217 72.609000 3749 4548 1 chr2D.!!$F1 799
3 TraesCS2D01G170700 chr2A 116014044 116019399 5355 True 2527.700 4486 95.219667 358 5710 3 chr2A.!!$R3 5352
4 TraesCS2D01G170700 chr2A 726032410 726033032 622 False 219.000 219 73.947000 3750 4364 1 chr2A.!!$F1 614
5 TraesCS2D01G170700 chr2B 165115296 165122004 6708 True 1688.875 4425 90.295250 1 5710 4 chr2B.!!$R1 5709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 85 0.036388 TTGAGATGAGGGCGTTGGTC 60.036 55.000 0.00 0.00 0.00 4.02 F
1133 3880 0.604578 CACAAGGTGAGCCCCAATTG 59.395 55.000 0.00 0.00 35.23 2.32 F
1321 4078 1.066908 GCTCAGGAGTCCAGAGATTCG 59.933 57.143 30.23 9.21 39.13 3.34 F
2977 6040 0.105964 TCCGATGGACCCTTATTGCG 59.894 55.000 0.00 0.00 0.00 4.85 F
3252 6319 0.108329 ACTATTGGAAGCGACCGTGG 60.108 55.000 0.00 0.00 0.00 4.94 F
4603 7736 0.737804 TTTTGCTTCACTCAGCGCAA 59.262 45.000 11.47 0.00 43.37 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1197 3944 0.528684 CGGATGAAGAAGCCTCGTCC 60.529 60.000 1.63 1.63 36.48 4.79 R
2111 4974 0.460459 TCCACACGAACAGCGAAACA 60.460 50.000 0.00 0.00 44.57 2.83 R
3252 6319 1.400530 ATGGTGTCCTACTAGGCCGC 61.401 60.000 0.00 0.00 34.61 6.53 R
4685 7818 2.710377 CACTCCATTGAAATCCGGACA 58.290 47.619 6.12 0.00 0.00 4.02 R
5060 8193 0.179174 CGACGTCCACATCGACATCA 60.179 55.000 10.58 0.00 40.86 3.07 R
5532 8668 0.034756 TGCTGCTTTGCGAACCTCTA 59.965 50.000 0.00 0.00 35.36 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 72 6.208644 GTGTTGCATTAGTTGTTGTTGAGAT 58.791 36.000 0.00 0.00 0.00 2.75
67 73 6.142798 GTGTTGCATTAGTTGTTGTTGAGATG 59.857 38.462 0.00 0.00 0.00 2.90
76 82 1.197721 GTTGTTGAGATGAGGGCGTTG 59.802 52.381 0.00 0.00 0.00 4.10
79 85 0.036388 TTGAGATGAGGGCGTTGGTC 60.036 55.000 0.00 0.00 0.00 4.02
90 96 1.135333 GGCGTTGGTCCTTTTGTTTGA 59.865 47.619 0.00 0.00 0.00 2.69
99 105 5.106317 TGGTCCTTTTGTTTGATAGATTCGC 60.106 40.000 0.00 0.00 0.00 4.70
106 112 9.132521 CTTTTGTTTGATAGATTCGCTTGAAAT 57.867 29.630 0.00 0.00 34.72 2.17
119 125 4.335315 TCGCTTGAAATTCCGCTCATATTT 59.665 37.500 0.00 0.00 0.00 1.40
120 126 5.036737 CGCTTGAAATTCCGCTCATATTTT 58.963 37.500 0.00 0.00 0.00 1.82
142 148 1.258982 GCGCTCGATTAAGGTGTCATG 59.741 52.381 0.00 0.00 0.00 3.07
143 149 2.540515 CGCTCGATTAAGGTGTCATGT 58.459 47.619 0.00 0.00 0.00 3.21
153 159 1.710244 AGGTGTCATGTTTCCCCATCA 59.290 47.619 0.00 0.00 0.00 3.07
181 187 9.843334 TTTTTATTGTTCGGGACACATAAATAC 57.157 29.630 13.02 0.00 38.18 1.89
183 189 9.887629 TTTATTGTTCGGGACACATAAATACTA 57.112 29.630 10.26 0.00 38.18 1.82
202 208 5.864628 ACTATTTCTTTTTCGGTCTCAGC 57.135 39.130 0.00 0.00 0.00 4.26
215 222 3.372206 CGGTCTCAGCCATTCTTTACAAG 59.628 47.826 0.00 0.00 0.00 3.16
218 225 2.424956 CTCAGCCATTCTTTACAAGCCC 59.575 50.000 0.00 0.00 0.00 5.19
232 239 4.660938 GCCCGCTCAAGGTTGGGT 62.661 66.667 0.00 0.00 43.89 4.51
234 241 2.268076 CCCGCTCAAGGTTGGGTTG 61.268 63.158 0.00 0.00 36.86 3.77
235 242 1.528309 CCGCTCAAGGTTGGGTTGT 60.528 57.895 0.00 0.00 0.00 3.32
236 243 1.654220 CGCTCAAGGTTGGGTTGTG 59.346 57.895 0.00 0.00 0.00 3.33
257 266 2.124570 CTACTGCCGGGCTTGCAT 60.125 61.111 21.46 3.55 38.22 3.96
338 347 2.946990 GGACGGGTTGAGTTTCTTTTGA 59.053 45.455 0.00 0.00 0.00 2.69
342 351 3.568007 CGGGTTGAGTTTCTTTTGATGGA 59.432 43.478 0.00 0.00 0.00 3.41
352 361 7.851228 AGTTTCTTTTGATGGAAAAACCTTCT 58.149 30.769 0.00 0.00 41.58 2.85
480 3158 2.436417 ACTGAAATCCACCATCAACCG 58.564 47.619 0.00 0.00 0.00 4.44
859 3583 2.041265 TGCTTCCTCCCTCCCTCC 59.959 66.667 0.00 0.00 0.00 4.30
860 3584 2.770475 GCTTCCTCCCTCCCTCCC 60.770 72.222 0.00 0.00 0.00 4.30
861 3585 3.124088 CTTCCTCCCTCCCTCCCT 58.876 66.667 0.00 0.00 0.00 4.20
862 3586 1.074850 CTTCCTCCCTCCCTCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
863 3587 2.613576 CTTCCTCCCTCCCTCCCTCC 62.614 70.000 0.00 0.00 0.00 4.30
864 3588 3.039526 CCTCCCTCCCTCCCTCCT 61.040 72.222 0.00 0.00 0.00 3.69
900 3624 1.071471 CCACTGGCTCCGTTCAGTT 59.929 57.895 0.00 0.00 41.71 3.16
925 3649 4.760047 CTTGACCGACCCGCCTGG 62.760 72.222 0.00 0.00 41.37 4.45
1133 3880 0.604578 CACAAGGTGAGCCCCAATTG 59.395 55.000 0.00 0.00 35.23 2.32
1138 3885 2.181975 AGGTGAGCCCCAATTGAATTG 58.818 47.619 10.84 10.84 39.94 2.32
1139 3886 2.178580 GGTGAGCCCCAATTGAATTGA 58.821 47.619 18.82 0.00 42.83 2.57
1153 3900 2.027385 GAATTGAATCCCCCTCTGTGC 58.973 52.381 0.00 0.00 0.00 4.57
1159 3906 1.912862 ATCCCCCTCTGTGCCTAATT 58.087 50.000 0.00 0.00 0.00 1.40
1197 3944 5.155509 TGTGTTTGAGTTCTTGATTCGTG 57.844 39.130 0.00 0.00 0.00 4.35
1299 4056 2.041620 AGTGGTTCCGGGTGTACTAGTA 59.958 50.000 0.00 0.00 0.00 1.82
1312 4069 4.276431 GTGTACTAGTATGCTCAGGAGTCC 59.724 50.000 5.75 0.00 0.00 3.85
1321 4078 1.066908 GCTCAGGAGTCCAGAGATTCG 59.933 57.143 30.23 9.21 39.13 3.34
1322 4079 2.649190 CTCAGGAGTCCAGAGATTCGA 58.351 52.381 23.75 0.99 39.13 3.71
1323 4080 3.221771 CTCAGGAGTCCAGAGATTCGAT 58.778 50.000 23.75 0.00 39.13 3.59
1341 4098 3.575687 TCGATGATGATCCACTGTGCTAT 59.424 43.478 1.29 0.00 0.00 2.97
1343 4100 3.758755 TGATGATCCACTGTGCTATCC 57.241 47.619 14.79 5.41 0.00 2.59
1382 4139 3.493129 TGTTTCGGTGTCTGAAATTCTCG 59.507 43.478 6.96 0.00 37.62 4.04
1414 4171 4.338118 TCGATGCTTTTAATTCATGGGTCC 59.662 41.667 0.00 0.00 0.00 4.46
1450 4208 7.042456 AGCAAAATATACTAGTTCACATCGCTG 60.042 37.037 0.00 0.00 0.00 5.18
1578 4336 1.978580 CCAAGTCCTGTCCACCTTAGT 59.021 52.381 0.00 0.00 0.00 2.24
1586 4344 6.002082 GTCCTGTCCACCTTAGTTGTAAATT 58.998 40.000 0.00 0.00 0.00 1.82
1653 4420 4.231890 ACCAACCAAATCCATATACCCTGT 59.768 41.667 0.00 0.00 0.00 4.00
1959 4726 2.724977 TGTAGTTCACTTCAGCCTCG 57.275 50.000 0.00 0.00 0.00 4.63
2111 4974 6.153340 CCACCTCTGACCATTTTATTGTTCAT 59.847 38.462 0.00 0.00 0.00 2.57
2131 4996 0.232303 GTTTCGCTGTTCGTGTGGAG 59.768 55.000 0.00 0.00 39.67 3.86
2208 5073 8.677148 TTTGAGTATCTTTAGTTTGTCAGCTT 57.323 30.769 0.00 0.00 34.92 3.74
2258 5123 7.761651 TTCGTAGATTGATGAGAATGTTCAG 57.238 36.000 0.00 0.00 35.04 3.02
2401 5266 4.769688 TCTTTATGGATCTGACAATGCGT 58.230 39.130 0.00 0.00 0.00 5.24
2403 5268 2.696989 ATGGATCTGACAATGCGTGA 57.303 45.000 0.00 0.00 0.00 4.35
2622 5490 7.378461 TGCTGAAAATTCGTCAAACTTCATAAC 59.622 33.333 0.00 0.00 0.00 1.89
2625 5493 7.378461 TGAAAATTCGTCAAACTTCATAACAGC 59.622 33.333 0.00 0.00 0.00 4.40
2633 5501 7.414436 GTCAAACTTCATAACAGCAGTGTTTA 58.586 34.615 0.00 0.00 45.00 2.01
2634 5502 7.913297 GTCAAACTTCATAACAGCAGTGTTTAA 59.087 33.333 0.00 0.00 45.00 1.52
2635 5503 8.462811 TCAAACTTCATAACAGCAGTGTTTAAA 58.537 29.630 0.00 0.00 45.00 1.52
2636 5504 9.081997 CAAACTTCATAACAGCAGTGTTTAAAA 57.918 29.630 0.00 0.00 45.00 1.52
2637 5505 9.816354 AAACTTCATAACAGCAGTGTTTAAAAT 57.184 25.926 0.00 0.00 45.00 1.82
2638 5506 8.801715 ACTTCATAACAGCAGTGTTTAAAATG 57.198 30.769 0.00 0.00 45.00 2.32
2639 5507 7.382218 ACTTCATAACAGCAGTGTTTAAAATGC 59.618 33.333 11.45 11.45 45.00 3.56
2885 5947 5.422970 TGGTAGTGACGGATACCTTTATTGT 59.577 40.000 3.30 0.00 41.74 2.71
2964 6027 4.393062 GGTGTGGCTATGAATATTCCGATG 59.607 45.833 12.90 2.41 0.00 3.84
2975 6038 6.237901 TGAATATTCCGATGGACCCTTATTG 58.762 40.000 12.90 0.00 0.00 1.90
2976 6039 2.341846 TTCCGATGGACCCTTATTGC 57.658 50.000 0.00 0.00 0.00 3.56
2977 6040 0.105964 TCCGATGGACCCTTATTGCG 59.894 55.000 0.00 0.00 0.00 4.85
3251 6318 1.278238 GACTATTGGAAGCGACCGTG 58.722 55.000 0.00 0.00 0.00 4.94
3252 6319 0.108329 ACTATTGGAAGCGACCGTGG 60.108 55.000 0.00 0.00 0.00 4.94
3253 6320 1.429148 CTATTGGAAGCGACCGTGGC 61.429 60.000 0.00 0.00 0.00 5.01
3405 6474 7.611213 AAATGTTGTAACTCTAGCACCATAC 57.389 36.000 0.00 0.00 0.00 2.39
3753 6825 6.014584 TGCAGGACTTAACAGAGATCACTTAA 60.015 38.462 0.00 0.00 0.00 1.85
4193 7276 3.196254 TCGGTTACTCCAAGGTAATCCAC 59.804 47.826 0.00 0.00 34.73 4.02
4423 7547 4.605183 TCCTTCACCTGAAACCTTCAAAA 58.395 39.130 0.00 0.00 39.58 2.44
4424 7548 4.401202 TCCTTCACCTGAAACCTTCAAAAC 59.599 41.667 0.00 0.00 39.58 2.43
4425 7549 4.441495 CCTTCACCTGAAACCTTCAAAACC 60.441 45.833 0.00 0.00 39.58 3.27
4466 7594 2.775384 TGTTTGGTCCTGTGGAGTAACT 59.225 45.455 0.00 0.00 29.39 2.24
4563 7691 5.240183 ACTGTGAGTTCATCCAACAATCAAG 59.760 40.000 0.00 0.00 37.48 3.02
4603 7736 0.737804 TTTTGCTTCACTCAGCGCAA 59.262 45.000 11.47 0.00 43.37 4.85
4685 7818 9.422681 AGTGTACAATACTCAGTACCTGATTAT 57.577 33.333 0.00 0.00 39.92 1.28
4756 7889 3.690460 CAAACCCTGAGCAAGTAATCCT 58.310 45.455 0.00 0.00 0.00 3.24
5060 8193 1.968704 TGGAGCTCGACGACATAGAT 58.031 50.000 7.83 0.00 0.00 1.98
5063 8196 2.486203 GGAGCTCGACGACATAGATGAT 59.514 50.000 7.83 0.00 0.00 2.45
5090 8223 3.735029 GACGTCGAGGACAGCGGT 61.735 66.667 12.85 0.00 32.09 5.68
5182 8315 2.618241 TGTGTTCATCCTTCTGTTGTGC 59.382 45.455 0.00 0.00 0.00 4.57
5184 8317 2.229792 GTTCATCCTTCTGTTGTGCCA 58.770 47.619 0.00 0.00 0.00 4.92
5202 8335 2.365293 GCCATTTGTTTCAGAGGGTTGT 59.635 45.455 0.00 0.00 0.00 3.32
5336 8472 3.063510 TCCTGGTGATTTGCTTCTCTG 57.936 47.619 0.00 0.00 0.00 3.35
5359 8495 0.438830 GCTTCGGCAGTTTACGTCAG 59.561 55.000 0.00 0.00 41.33 3.51
5360 8496 1.933500 GCTTCGGCAGTTTACGTCAGA 60.934 52.381 0.00 0.00 41.33 3.27
5361 8497 2.400399 CTTCGGCAGTTTACGTCAGAA 58.600 47.619 0.00 0.00 0.00 3.02
5362 8498 2.060326 TCGGCAGTTTACGTCAGAAG 57.940 50.000 0.00 0.00 0.00 2.85
5363 8499 1.068474 CGGCAGTTTACGTCAGAAGG 58.932 55.000 0.00 0.00 0.00 3.46
5365 8501 2.352030 CGGCAGTTTACGTCAGAAGGTA 60.352 50.000 0.00 0.00 0.00 3.08
5366 8502 3.251571 GGCAGTTTACGTCAGAAGGTAG 58.748 50.000 0.00 0.00 0.00 3.18
5367 8503 3.305881 GGCAGTTTACGTCAGAAGGTAGT 60.306 47.826 0.00 0.00 0.00 2.73
5368 8504 3.919197 GCAGTTTACGTCAGAAGGTAGTC 59.081 47.826 0.00 0.00 0.00 2.59
5369 8505 4.483311 CAGTTTACGTCAGAAGGTAGTCC 58.517 47.826 0.00 0.00 0.00 3.85
5371 8507 4.217983 AGTTTACGTCAGAAGGTAGTCCAG 59.782 45.833 0.00 0.00 35.89 3.86
5372 8508 2.581216 ACGTCAGAAGGTAGTCCAGA 57.419 50.000 0.00 0.00 35.89 3.86
5373 8509 2.872732 ACGTCAGAAGGTAGTCCAGAA 58.127 47.619 0.00 0.00 35.89 3.02
5374 8510 2.820787 ACGTCAGAAGGTAGTCCAGAAG 59.179 50.000 0.00 0.00 35.89 2.85
5375 8511 2.416162 CGTCAGAAGGTAGTCCAGAAGC 60.416 54.545 0.00 0.00 35.89 3.86
5376 8512 1.819288 TCAGAAGGTAGTCCAGAAGCG 59.181 52.381 0.00 0.00 35.89 4.68
5377 8513 1.134965 CAGAAGGTAGTCCAGAAGCGG 60.135 57.143 0.00 0.00 35.89 5.52
5378 8514 1.183549 GAAGGTAGTCCAGAAGCGGA 58.816 55.000 0.00 0.00 35.89 5.54
5380 8516 1.115467 AGGTAGTCCAGAAGCGGATG 58.885 55.000 0.00 0.00 37.41 3.51
5381 8517 0.530870 GGTAGTCCAGAAGCGGATGC 60.531 60.000 0.00 0.00 37.41 3.91
5383 8519 0.901827 TAGTCCAGAAGCGGATGCAA 59.098 50.000 0.00 0.00 46.23 4.08
5384 8520 0.036732 AGTCCAGAAGCGGATGCAAA 59.963 50.000 0.00 0.00 46.23 3.68
5385 8521 1.098050 GTCCAGAAGCGGATGCAAAT 58.902 50.000 0.00 0.00 46.23 2.32
5386 8522 1.474077 GTCCAGAAGCGGATGCAAATT 59.526 47.619 0.00 0.00 46.23 1.82
5387 8523 1.473677 TCCAGAAGCGGATGCAAATTG 59.526 47.619 0.00 0.00 46.23 2.32
5388 8524 1.203052 CCAGAAGCGGATGCAAATTGT 59.797 47.619 0.00 0.00 46.23 2.71
5389 8525 2.256174 CAGAAGCGGATGCAAATTGTG 58.744 47.619 0.00 0.00 46.23 3.33
5403 8539 5.281693 CAAATTGTGCTCTACATCAACGA 57.718 39.130 0.00 0.00 39.48 3.85
5404 8540 5.872635 CAAATTGTGCTCTACATCAACGAT 58.127 37.500 0.00 0.00 39.48 3.73
5405 8541 7.003939 CAAATTGTGCTCTACATCAACGATA 57.996 36.000 0.00 0.00 39.48 2.92
5406 8542 7.633621 CAAATTGTGCTCTACATCAACGATAT 58.366 34.615 0.00 0.00 39.48 1.63
5407 8543 7.792374 AATTGTGCTCTACATCAACGATATT 57.208 32.000 0.00 0.00 39.48 1.28
5408 8544 7.792374 ATTGTGCTCTACATCAACGATATTT 57.208 32.000 0.00 0.00 39.48 1.40
5409 8545 6.588348 TGTGCTCTACATCAACGATATTTG 57.412 37.500 0.00 0.00 33.42 2.32
5410 8546 6.337356 TGTGCTCTACATCAACGATATTTGA 58.663 36.000 0.00 0.00 39.79 2.69
5411 8547 6.816140 TGTGCTCTACATCAACGATATTTGAA 59.184 34.615 0.00 0.00 38.95 2.69
5412 8548 7.333174 TGTGCTCTACATCAACGATATTTGAAA 59.667 33.333 0.00 0.00 38.95 2.69
5413 8549 7.848051 GTGCTCTACATCAACGATATTTGAAAG 59.152 37.037 0.00 0.00 38.95 2.62
5414 8550 7.763985 TGCTCTACATCAACGATATTTGAAAGA 59.236 33.333 0.00 0.00 38.95 2.52
5415 8551 8.058915 GCTCTACATCAACGATATTTGAAAGAC 58.941 37.037 0.00 0.00 38.95 3.01
5416 8552 8.115491 TCTACATCAACGATATTTGAAAGACG 57.885 34.615 0.00 0.00 38.95 4.18
5417 8553 6.961359 ACATCAACGATATTTGAAAGACGA 57.039 33.333 7.81 0.00 38.95 4.20
5418 8554 7.359262 ACATCAACGATATTTGAAAGACGAA 57.641 32.000 7.81 0.00 38.95 3.85
5419 8555 7.802738 ACATCAACGATATTTGAAAGACGAAA 58.197 30.769 7.81 0.00 38.95 3.46
5421 8557 8.727733 CATCAACGATATTTGAAAGACGAAATG 58.272 33.333 7.81 5.29 38.95 2.32
5423 8559 7.744276 TCAACGATATTTGAAAGACGAAATGTG 59.256 33.333 7.81 0.00 32.42 3.21
5426 8562 6.022251 CGATATTTGAAAGACGAAATGTGTGC 60.022 38.462 0.00 0.00 0.00 4.57
5428 8564 3.607422 TGAAAGACGAAATGTGTGCTG 57.393 42.857 0.00 0.00 0.00 4.41
5430 8566 1.238439 AAGACGAAATGTGTGCTGGG 58.762 50.000 0.00 0.00 0.00 4.45
5433 8569 0.951558 ACGAAATGTGTGCTGGGTTC 59.048 50.000 0.00 0.00 0.00 3.62
5434 8570 0.110238 CGAAATGTGTGCTGGGTTCG 60.110 55.000 0.00 0.00 32.89 3.95
5436 8572 0.667993 AAATGTGTGCTGGGTTCGTG 59.332 50.000 0.00 0.00 0.00 4.35
5438 8574 2.203153 GTGTGCTGGGTTCGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
5441 8577 1.116536 TGTGCTGGGTTCGTGGTAGA 61.117 55.000 0.00 0.00 0.00 2.59
5442 8578 0.249398 GTGCTGGGTTCGTGGTAGAT 59.751 55.000 0.00 0.00 0.00 1.98
5443 8579 0.249120 TGCTGGGTTCGTGGTAGATG 59.751 55.000 0.00 0.00 0.00 2.90
5445 8581 1.191535 CTGGGTTCGTGGTAGATGGA 58.808 55.000 0.00 0.00 0.00 3.41
5446 8582 1.762957 CTGGGTTCGTGGTAGATGGAT 59.237 52.381 0.00 0.00 0.00 3.41
5448 8584 1.202651 GGGTTCGTGGTAGATGGATGG 60.203 57.143 0.00 0.00 0.00 3.51
5449 8585 1.583054 GTTCGTGGTAGATGGATGGC 58.417 55.000 0.00 0.00 0.00 4.40
5450 8586 1.134521 GTTCGTGGTAGATGGATGGCA 60.135 52.381 0.00 0.00 0.00 4.92
5451 8587 1.423584 TCGTGGTAGATGGATGGCAT 58.576 50.000 0.00 0.00 0.00 4.40
5452 8588 1.070601 TCGTGGTAGATGGATGGCATG 59.929 52.381 3.81 0.00 0.00 4.06
5453 8589 1.202687 CGTGGTAGATGGATGGCATGT 60.203 52.381 3.81 0.00 0.00 3.21
5454 8590 2.037121 CGTGGTAGATGGATGGCATGTA 59.963 50.000 3.81 0.00 0.00 2.29
5456 8592 4.005650 GTGGTAGATGGATGGCATGTATG 58.994 47.826 3.81 0.00 0.00 2.39
5457 8593 3.009363 TGGTAGATGGATGGCATGTATGG 59.991 47.826 3.81 0.00 0.00 2.74
5458 8594 3.009473 GGTAGATGGATGGCATGTATGGT 59.991 47.826 3.81 0.00 0.00 3.55
5459 8595 3.889859 AGATGGATGGCATGTATGGTT 57.110 42.857 3.81 0.00 0.00 3.67
5460 8596 4.188937 AGATGGATGGCATGTATGGTTT 57.811 40.909 3.81 0.00 0.00 3.27
5461 8597 4.549668 AGATGGATGGCATGTATGGTTTT 58.450 39.130 3.81 0.00 0.00 2.43
5462 8598 4.586001 AGATGGATGGCATGTATGGTTTTC 59.414 41.667 3.81 0.00 0.00 2.29
5463 8599 3.979911 TGGATGGCATGTATGGTTTTCT 58.020 40.909 3.81 0.00 0.00 2.52
5464 8600 3.953612 TGGATGGCATGTATGGTTTTCTC 59.046 43.478 3.81 0.00 0.00 2.87
5465 8601 3.319122 GGATGGCATGTATGGTTTTCTCC 59.681 47.826 3.81 0.00 0.00 3.71
5466 8602 3.737559 TGGCATGTATGGTTTTCTCCT 57.262 42.857 0.00 0.00 0.00 3.69
5467 8603 4.046286 TGGCATGTATGGTTTTCTCCTT 57.954 40.909 0.00 0.00 0.00 3.36
5468 8604 4.016444 TGGCATGTATGGTTTTCTCCTTC 58.984 43.478 0.00 0.00 0.00 3.46
5469 8605 3.065371 GGCATGTATGGTTTTCTCCTTCG 59.935 47.826 0.00 0.00 0.00 3.79
5470 8606 3.065371 GCATGTATGGTTTTCTCCTTCGG 59.935 47.826 0.00 0.00 0.00 4.30
5471 8607 2.706890 TGTATGGTTTTCTCCTTCGGC 58.293 47.619 0.00 0.00 0.00 5.54
5472 8608 1.664151 GTATGGTTTTCTCCTTCGGCG 59.336 52.381 0.00 0.00 0.00 6.46
5473 8609 0.036306 ATGGTTTTCTCCTTCGGCGT 59.964 50.000 6.85 0.00 0.00 5.68
5474 8610 0.601841 TGGTTTTCTCCTTCGGCGTC 60.602 55.000 6.85 0.00 0.00 5.19
5475 8611 0.320508 GGTTTTCTCCTTCGGCGTCT 60.321 55.000 6.85 0.00 0.00 4.18
5476 8612 1.509703 GTTTTCTCCTTCGGCGTCTT 58.490 50.000 6.85 0.00 0.00 3.01
5477 8613 2.611224 GGTTTTCTCCTTCGGCGTCTTA 60.611 50.000 6.85 0.00 0.00 2.10
5478 8614 2.649331 TTTCTCCTTCGGCGTCTTAG 57.351 50.000 6.85 1.13 0.00 2.18
5479 8615 1.542492 TTCTCCTTCGGCGTCTTAGT 58.458 50.000 6.85 0.00 0.00 2.24
5480 8616 1.093159 TCTCCTTCGGCGTCTTAGTC 58.907 55.000 6.85 0.00 0.00 2.59
5481 8617 0.248134 CTCCTTCGGCGTCTTAGTCG 60.248 60.000 6.85 0.00 41.09 4.18
5482 8618 0.957395 TCCTTCGGCGTCTTAGTCGT 60.957 55.000 6.85 0.00 40.52 4.34
5483 8619 0.729116 CCTTCGGCGTCTTAGTCGTA 59.271 55.000 6.85 0.00 40.52 3.43
5484 8620 1.267932 CCTTCGGCGTCTTAGTCGTAG 60.268 57.143 6.85 0.00 40.52 3.51
5485 8621 1.396301 CTTCGGCGTCTTAGTCGTAGT 59.604 52.381 6.85 0.00 40.52 2.73
5486 8622 2.293677 TCGGCGTCTTAGTCGTAGTA 57.706 50.000 6.85 0.00 40.52 1.82
5487 8623 2.196749 TCGGCGTCTTAGTCGTAGTAG 58.803 52.381 6.85 0.00 40.52 2.57
5488 8624 1.260033 CGGCGTCTTAGTCGTAGTAGG 59.740 57.143 0.00 0.00 34.13 3.18
5489 8625 1.601430 GGCGTCTTAGTCGTAGTAGGG 59.399 57.143 0.68 0.00 0.00 3.53
5490 8626 2.284190 GCGTCTTAGTCGTAGTAGGGT 58.716 52.381 0.68 0.00 0.00 4.34
5491 8627 2.031437 GCGTCTTAGTCGTAGTAGGGTG 59.969 54.545 0.68 0.00 0.00 4.61
5492 8628 3.265791 CGTCTTAGTCGTAGTAGGGTGT 58.734 50.000 0.00 0.00 0.00 4.16
5493 8629 3.686726 CGTCTTAGTCGTAGTAGGGTGTT 59.313 47.826 0.00 0.00 0.00 3.32
5494 8630 4.870426 CGTCTTAGTCGTAGTAGGGTGTTA 59.130 45.833 0.00 0.00 0.00 2.41
5495 8631 5.006165 CGTCTTAGTCGTAGTAGGGTGTTAG 59.994 48.000 0.00 0.00 0.00 2.34
5496 8632 6.109359 GTCTTAGTCGTAGTAGGGTGTTAGA 58.891 44.000 0.00 0.00 0.00 2.10
5497 8633 6.765512 GTCTTAGTCGTAGTAGGGTGTTAGAT 59.234 42.308 0.00 0.00 0.00 1.98
5498 8634 6.989169 TCTTAGTCGTAGTAGGGTGTTAGATC 59.011 42.308 0.00 0.00 0.00 2.75
5499 8635 5.370875 AGTCGTAGTAGGGTGTTAGATCT 57.629 43.478 0.00 0.00 0.00 2.75
5500 8636 5.753716 AGTCGTAGTAGGGTGTTAGATCTT 58.246 41.667 0.00 0.00 0.00 2.40
5501 8637 6.893583 AGTCGTAGTAGGGTGTTAGATCTTA 58.106 40.000 0.00 0.00 0.00 2.10
5502 8638 6.991531 AGTCGTAGTAGGGTGTTAGATCTTAG 59.008 42.308 0.00 0.00 0.00 2.18
5503 8639 6.765512 GTCGTAGTAGGGTGTTAGATCTTAGT 59.234 42.308 0.00 0.00 0.00 2.24
5504 8640 7.281999 GTCGTAGTAGGGTGTTAGATCTTAGTT 59.718 40.741 0.00 0.00 0.00 2.24
5505 8641 7.831193 TCGTAGTAGGGTGTTAGATCTTAGTTT 59.169 37.037 0.00 0.00 0.00 2.66
5506 8642 7.914346 CGTAGTAGGGTGTTAGATCTTAGTTTG 59.086 40.741 0.00 0.00 0.00 2.93
5507 8643 8.964772 GTAGTAGGGTGTTAGATCTTAGTTTGA 58.035 37.037 0.00 0.00 0.00 2.69
5508 8644 8.611051 AGTAGGGTGTTAGATCTTAGTTTGAT 57.389 34.615 0.00 0.00 0.00 2.57
5509 8645 9.710818 AGTAGGGTGTTAGATCTTAGTTTGATA 57.289 33.333 0.00 0.00 0.00 2.15
5510 8646 9.968870 GTAGGGTGTTAGATCTTAGTTTGATAG 57.031 37.037 0.00 0.00 0.00 2.08
5511 8647 7.501844 AGGGTGTTAGATCTTAGTTTGATAGC 58.498 38.462 0.00 0.00 0.00 2.97
5512 8648 7.345914 AGGGTGTTAGATCTTAGTTTGATAGCT 59.654 37.037 0.00 0.00 0.00 3.32
5513 8649 7.654116 GGGTGTTAGATCTTAGTTTGATAGCTC 59.346 40.741 0.00 0.00 0.00 4.09
5514 8650 8.198109 GGTGTTAGATCTTAGTTTGATAGCTCA 58.802 37.037 0.00 0.00 0.00 4.26
5515 8651 9.026074 GTGTTAGATCTTAGTTTGATAGCTCAC 57.974 37.037 0.00 0.00 0.00 3.51
5516 8652 8.198109 TGTTAGATCTTAGTTTGATAGCTCACC 58.802 37.037 0.00 0.00 0.00 4.02
5517 8653 8.417884 GTTAGATCTTAGTTTGATAGCTCACCT 58.582 37.037 0.00 0.00 0.00 4.00
5518 8654 7.430760 AGATCTTAGTTTGATAGCTCACCTT 57.569 36.000 0.00 0.00 0.00 3.50
5519 8655 7.856415 AGATCTTAGTTTGATAGCTCACCTTT 58.144 34.615 0.00 0.00 0.00 3.11
5520 8656 7.768120 AGATCTTAGTTTGATAGCTCACCTTTG 59.232 37.037 0.00 0.00 0.00 2.77
5521 8657 6.173339 TCTTAGTTTGATAGCTCACCTTTGG 58.827 40.000 0.00 0.00 0.00 3.28
5522 8658 4.373156 AGTTTGATAGCTCACCTTTGGT 57.627 40.909 0.00 0.00 35.62 3.67
5548 8684 1.808411 CCTTAGAGGTTCGCAAAGCA 58.192 50.000 0.00 0.00 35.29 3.91
5549 8685 1.734465 CCTTAGAGGTTCGCAAAGCAG 59.266 52.381 0.00 0.00 35.29 4.24
5550 8686 1.129437 CTTAGAGGTTCGCAAAGCAGC 59.871 52.381 0.00 0.00 35.29 5.25
5551 8687 0.034756 TAGAGGTTCGCAAAGCAGCA 59.965 50.000 0.00 0.00 35.29 4.41
5552 8688 0.607489 AGAGGTTCGCAAAGCAGCAT 60.607 50.000 0.00 0.00 35.29 3.79
5553 8689 1.086696 GAGGTTCGCAAAGCAGCATA 58.913 50.000 0.00 0.00 35.29 3.14
5554 8690 1.672881 GAGGTTCGCAAAGCAGCATAT 59.327 47.619 0.00 0.00 35.29 1.78
5555 8691 2.094675 AGGTTCGCAAAGCAGCATATT 58.905 42.857 0.00 0.00 35.29 1.28
5556 8692 3.278574 AGGTTCGCAAAGCAGCATATTA 58.721 40.909 0.00 0.00 35.29 0.98
5557 8693 3.313526 AGGTTCGCAAAGCAGCATATTAG 59.686 43.478 0.00 0.00 35.29 1.73
5558 8694 3.038710 GTTCGCAAAGCAGCATATTAGC 58.961 45.455 0.00 0.00 0.00 3.09
5559 8695 1.261354 TCGCAAAGCAGCATATTAGCG 59.739 47.619 0.00 0.00 44.66 4.26
5560 8696 1.261354 CGCAAAGCAGCATATTAGCGA 59.739 47.619 0.00 0.00 46.01 4.93
5561 8697 2.644078 GCAAAGCAGCATATTAGCGAC 58.356 47.619 0.00 0.00 40.15 5.19
5562 8698 2.896289 CAAAGCAGCATATTAGCGACG 58.104 47.619 0.00 0.00 40.15 5.12
5563 8699 2.225068 AAGCAGCATATTAGCGACGT 57.775 45.000 0.00 0.00 40.15 4.34
5564 8700 3.364889 AAGCAGCATATTAGCGACGTA 57.635 42.857 0.00 0.00 40.15 3.57
5565 8701 3.364889 AGCAGCATATTAGCGACGTAA 57.635 42.857 0.00 0.00 40.15 3.18
5566 8702 3.914312 AGCAGCATATTAGCGACGTAAT 58.086 40.909 0.00 2.71 40.15 1.89
5567 8703 3.675225 AGCAGCATATTAGCGACGTAATG 59.325 43.478 0.00 0.00 40.15 1.90
5568 8704 3.428870 GCAGCATATTAGCGACGTAATGT 59.571 43.478 0.00 0.00 40.15 2.71
5569 8705 4.433022 GCAGCATATTAGCGACGTAATGTC 60.433 45.833 0.00 0.00 44.53 3.06
5581 8717 4.877942 GACGTAATGTCGGTTGTTATGTG 58.122 43.478 0.00 0.00 37.96 3.21
5582 8718 4.558178 ACGTAATGTCGGTTGTTATGTGA 58.442 39.130 0.00 0.00 34.94 3.58
5583 8719 4.386652 ACGTAATGTCGGTTGTTATGTGAC 59.613 41.667 0.00 0.00 34.94 3.67
5584 8720 4.624024 CGTAATGTCGGTTGTTATGTGACT 59.376 41.667 0.00 0.00 0.00 3.41
5585 8721 5.119588 CGTAATGTCGGTTGTTATGTGACTT 59.880 40.000 0.00 0.00 0.00 3.01
5586 8722 5.356882 AATGTCGGTTGTTATGTGACTTG 57.643 39.130 0.00 0.00 0.00 3.16
5587 8723 3.799366 TGTCGGTTGTTATGTGACTTGT 58.201 40.909 0.00 0.00 0.00 3.16
5588 8724 4.946445 TGTCGGTTGTTATGTGACTTGTA 58.054 39.130 0.00 0.00 0.00 2.41
5589 8725 5.358090 TGTCGGTTGTTATGTGACTTGTAA 58.642 37.500 0.00 0.00 0.00 2.41
5590 8726 5.992829 TGTCGGTTGTTATGTGACTTGTAAT 59.007 36.000 0.00 0.00 0.00 1.89
5591 8727 6.483974 TGTCGGTTGTTATGTGACTTGTAATT 59.516 34.615 0.00 0.00 0.00 1.40
5592 8728 7.012515 TGTCGGTTGTTATGTGACTTGTAATTT 59.987 33.333 0.00 0.00 0.00 1.82
5593 8729 7.322699 GTCGGTTGTTATGTGACTTGTAATTTG 59.677 37.037 0.00 0.00 0.00 2.32
5594 8730 7.226918 TCGGTTGTTATGTGACTTGTAATTTGA 59.773 33.333 0.00 0.00 0.00 2.69
5595 8731 8.020819 CGGTTGTTATGTGACTTGTAATTTGAT 58.979 33.333 0.00 0.00 0.00 2.57
5596 8732 9.341899 GGTTGTTATGTGACTTGTAATTTGATC 57.658 33.333 0.00 0.00 0.00 2.92
5617 8753 9.755804 TTGATCTTTATGATATGAGTGAGACAC 57.244 33.333 0.00 0.00 35.14 3.67
5618 8754 8.917088 TGATCTTTATGATATGAGTGAGACACA 58.083 33.333 4.75 0.00 34.43 3.72
5619 8755 9.926158 GATCTTTATGATATGAGTGAGACACAT 57.074 33.333 4.75 0.00 34.43 3.21
5629 8765 9.716531 ATATGAGTGAGACACATATTAACATGG 57.283 33.333 0.00 0.00 38.59 3.66
5630 8766 7.181569 TGAGTGAGACACATATTAACATGGA 57.818 36.000 0.00 0.00 36.74 3.41
5631 8767 7.619965 TGAGTGAGACACATATTAACATGGAA 58.380 34.615 0.00 0.00 36.74 3.53
5632 8768 8.100164 TGAGTGAGACACATATTAACATGGAAA 58.900 33.333 0.00 0.00 36.74 3.13
5633 8769 8.862325 AGTGAGACACATATTAACATGGAAAA 57.138 30.769 0.00 0.00 36.74 2.29
5634 8770 9.295825 AGTGAGACACATATTAACATGGAAAAA 57.704 29.630 0.00 0.00 36.74 1.94
5710 8846 3.066380 TGTTGATCCATCGTGTGTTCAG 58.934 45.455 0.00 0.00 0.00 3.02
5711 8847 2.385013 TGATCCATCGTGTGTTCAGG 57.615 50.000 0.00 0.00 0.00 3.86
5712 8848 1.066215 TGATCCATCGTGTGTTCAGGG 60.066 52.381 0.00 0.00 0.00 4.45
5713 8849 0.253044 ATCCATCGTGTGTTCAGGGG 59.747 55.000 0.00 0.00 0.00 4.79
5714 8850 1.125093 TCCATCGTGTGTTCAGGGGT 61.125 55.000 0.00 0.00 0.00 4.95
5715 8851 0.250727 CCATCGTGTGTTCAGGGGTT 60.251 55.000 0.00 0.00 0.00 4.11
5716 8852 1.604604 CATCGTGTGTTCAGGGGTTT 58.395 50.000 0.00 0.00 0.00 3.27
5717 8853 1.266718 CATCGTGTGTTCAGGGGTTTG 59.733 52.381 0.00 0.00 0.00 2.93
5718 8854 0.253610 TCGTGTGTTCAGGGGTTTGT 59.746 50.000 0.00 0.00 0.00 2.83
5719 8855 1.485480 TCGTGTGTTCAGGGGTTTGTA 59.515 47.619 0.00 0.00 0.00 2.41
5720 8856 1.600485 CGTGTGTTCAGGGGTTTGTAC 59.400 52.381 0.00 0.00 0.00 2.90
5721 8857 2.743838 CGTGTGTTCAGGGGTTTGTACT 60.744 50.000 0.00 0.00 0.00 2.73
5722 8858 3.493002 CGTGTGTTCAGGGGTTTGTACTA 60.493 47.826 0.00 0.00 0.00 1.82
5723 8859 4.648651 GTGTGTTCAGGGGTTTGTACTAT 58.351 43.478 0.00 0.00 0.00 2.12
5724 8860 5.067954 GTGTGTTCAGGGGTTTGTACTATT 58.932 41.667 0.00 0.00 0.00 1.73
5725 8861 5.180680 GTGTGTTCAGGGGTTTGTACTATTC 59.819 44.000 0.00 0.00 0.00 1.75
5726 8862 5.072600 TGTGTTCAGGGGTTTGTACTATTCT 59.927 40.000 0.00 0.00 0.00 2.40
5727 8863 6.270463 TGTGTTCAGGGGTTTGTACTATTCTA 59.730 38.462 0.00 0.00 0.00 2.10
5728 8864 7.163441 GTGTTCAGGGGTTTGTACTATTCTAA 58.837 38.462 0.00 0.00 0.00 2.10
5729 8865 7.662669 GTGTTCAGGGGTTTGTACTATTCTAAA 59.337 37.037 0.00 0.00 0.00 1.85
5730 8866 7.662669 TGTTCAGGGGTTTGTACTATTCTAAAC 59.337 37.037 0.00 0.00 33.48 2.01
5731 8867 7.563724 TCAGGGGTTTGTACTATTCTAAACT 57.436 36.000 0.00 0.00 34.40 2.66
5732 8868 8.669055 TCAGGGGTTTGTACTATTCTAAACTA 57.331 34.615 0.00 0.00 34.40 2.24
5733 8869 8.534496 TCAGGGGTTTGTACTATTCTAAACTAC 58.466 37.037 0.00 0.00 34.40 2.73
5734 8870 8.537858 CAGGGGTTTGTACTATTCTAAACTACT 58.462 37.037 0.00 0.00 34.40 2.57
5735 8871 8.756927 AGGGGTTTGTACTATTCTAAACTACTC 58.243 37.037 0.00 0.00 34.40 2.59
5736 8872 7.704047 GGGGTTTGTACTATTCTAAACTACTCG 59.296 40.741 0.00 0.00 34.40 4.18
5737 8873 8.246871 GGGTTTGTACTATTCTAAACTACTCGT 58.753 37.037 0.00 0.00 34.40 4.18
5751 8887 5.395682 ACTACTCGTAGTTGGTATTGCAA 57.604 39.130 0.00 0.00 43.35 4.08
5752 8888 5.166398 ACTACTCGTAGTTGGTATTGCAAC 58.834 41.667 0.00 0.00 43.35 4.17
5753 8889 4.267349 ACTCGTAGTTGGTATTGCAACT 57.733 40.909 0.00 0.00 43.24 3.16
5754 8890 5.395682 ACTCGTAGTTGGTATTGCAACTA 57.604 39.130 0.00 0.00 41.34 2.24
5755 8891 5.786311 ACTCGTAGTTGGTATTGCAACTAA 58.214 37.500 0.00 0.00 43.03 2.24
5756 8892 6.225318 ACTCGTAGTTGGTATTGCAACTAAA 58.775 36.000 0.00 0.00 43.03 1.85
5757 8893 6.707161 ACTCGTAGTTGGTATTGCAACTAAAA 59.293 34.615 0.00 0.00 43.03 1.52
5758 8894 6.890558 TCGTAGTTGGTATTGCAACTAAAAC 58.109 36.000 0.00 5.05 43.03 2.43
5759 8895 6.482641 TCGTAGTTGGTATTGCAACTAAAACA 59.517 34.615 0.00 0.00 43.03 2.83
5760 8896 7.012138 TCGTAGTTGGTATTGCAACTAAAACAA 59.988 33.333 0.00 0.00 43.03 2.83
5761 8897 7.112426 CGTAGTTGGTATTGCAACTAAAACAAC 59.888 37.037 18.78 18.78 43.03 3.32
5762 8898 7.107639 AGTTGGTATTGCAACTAAAACAACT 57.892 32.000 21.46 21.46 39.57 3.16
5763 8899 8.228035 AGTTGGTATTGCAACTAAAACAACTA 57.772 30.769 23.89 0.97 42.69 2.24
5764 8900 8.349983 AGTTGGTATTGCAACTAAAACAACTAG 58.650 33.333 23.89 0.00 42.69 2.57
5765 8901 7.811117 TGGTATTGCAACTAAAACAACTAGT 57.189 32.000 0.00 0.00 0.00 2.57
5766 8902 8.905660 TGGTATTGCAACTAAAACAACTAGTA 57.094 30.769 0.00 0.00 0.00 1.82
5767 8903 9.509956 TGGTATTGCAACTAAAACAACTAGTAT 57.490 29.630 0.00 0.00 0.00 2.12
5772 8908 8.671384 TGCAACTAAAACAACTAGTATTGAGT 57.329 30.769 0.00 0.00 33.57 3.41
5773 8909 9.767228 TGCAACTAAAACAACTAGTATTGAGTA 57.233 29.630 0.00 0.00 33.57 2.59
5780 8916 8.803397 AAACAACTAGTATTGAGTATTTCCCC 57.197 34.615 0.00 0.00 33.57 4.81
5781 8917 7.750947 ACAACTAGTATTGAGTATTTCCCCT 57.249 36.000 0.00 0.00 33.57 4.79
5782 8918 8.159229 ACAACTAGTATTGAGTATTTCCCCTT 57.841 34.615 0.00 0.00 33.57 3.95
5783 8919 8.612145 ACAACTAGTATTGAGTATTTCCCCTTT 58.388 33.333 0.00 0.00 33.57 3.11
5784 8920 9.462606 CAACTAGTATTGAGTATTTCCCCTTTT 57.537 33.333 0.00 0.00 0.00 2.27
5837 8973 9.838339 ATTTTTAGGGTGACTAGAGTATTCATG 57.162 33.333 0.00 0.00 32.16 3.07
5838 8974 7.973048 TTTAGGGTGACTAGAGTATTCATGT 57.027 36.000 0.00 0.00 32.16 3.21
5839 8975 7.973048 TTAGGGTGACTAGAGTATTCATGTT 57.027 36.000 0.00 0.00 32.16 2.71
5840 8976 6.472686 AGGGTGACTAGAGTATTCATGTTC 57.527 41.667 0.00 0.00 0.00 3.18
5841 8977 5.364157 AGGGTGACTAGAGTATTCATGTTCC 59.636 44.000 0.00 0.00 0.00 3.62
5842 8978 5.128827 GGGTGACTAGAGTATTCATGTTCCA 59.871 44.000 0.00 0.00 0.00 3.53
5843 8979 6.351881 GGGTGACTAGAGTATTCATGTTCCAA 60.352 42.308 0.00 0.00 0.00 3.53
5844 8980 7.103641 GGTGACTAGAGTATTCATGTTCCAAA 58.896 38.462 0.00 0.00 0.00 3.28
5845 8981 7.064728 GGTGACTAGAGTATTCATGTTCCAAAC 59.935 40.741 0.00 0.00 0.00 2.93
5846 8982 7.064728 GTGACTAGAGTATTCATGTTCCAAACC 59.935 40.741 0.00 0.00 0.00 3.27
5847 8983 7.016153 ACTAGAGTATTCATGTTCCAAACCA 57.984 36.000 0.00 0.00 0.00 3.67
5848 8984 7.458397 ACTAGAGTATTCATGTTCCAAACCAA 58.542 34.615 0.00 0.00 0.00 3.67
5849 8985 7.942341 ACTAGAGTATTCATGTTCCAAACCAAA 59.058 33.333 0.00 0.00 0.00 3.28
5850 8986 7.595819 AGAGTATTCATGTTCCAAACCAAAA 57.404 32.000 0.00 0.00 0.00 2.44
5851 8987 7.661040 AGAGTATTCATGTTCCAAACCAAAAG 58.339 34.615 0.00 0.00 0.00 2.27
5852 8988 6.758254 AGTATTCATGTTCCAAACCAAAAGG 58.242 36.000 0.00 0.00 0.00 3.11
5853 8989 5.885449 ATTCATGTTCCAAACCAAAAGGA 57.115 34.783 0.00 0.00 0.00 3.36
5854 8990 5.683876 TTCATGTTCCAAACCAAAAGGAA 57.316 34.783 0.00 0.00 39.01 3.36
5855 8991 5.683876 TCATGTTCCAAACCAAAAGGAAA 57.316 34.783 0.00 0.00 42.59 3.13
5856 8992 6.054860 TCATGTTCCAAACCAAAAGGAAAA 57.945 33.333 0.00 0.00 42.59 2.29
5857 8993 5.877564 TCATGTTCCAAACCAAAAGGAAAAC 59.122 36.000 0.00 0.00 42.59 2.43
5858 8994 5.228945 TGTTCCAAACCAAAAGGAAAACA 57.771 34.783 0.00 0.00 42.59 2.83
5859 8995 5.241662 TGTTCCAAACCAAAAGGAAAACAG 58.758 37.500 0.00 0.00 42.59 3.16
5860 8996 5.012148 TGTTCCAAACCAAAAGGAAAACAGA 59.988 36.000 0.00 0.00 42.59 3.41
5861 8997 5.746990 TCCAAACCAAAAGGAAAACAGAA 57.253 34.783 0.00 0.00 0.00 3.02
5862 8998 5.483811 TCCAAACCAAAAGGAAAACAGAAC 58.516 37.500 0.00 0.00 0.00 3.01
5863 8999 4.634004 CCAAACCAAAAGGAAAACAGAACC 59.366 41.667 0.00 0.00 0.00 3.62
5864 9000 5.241662 CAAACCAAAAGGAAAACAGAACCA 58.758 37.500 0.00 0.00 0.00 3.67
5865 9001 4.465632 ACCAAAAGGAAAACAGAACCAC 57.534 40.909 0.00 0.00 0.00 4.16
5866 9002 3.835395 ACCAAAAGGAAAACAGAACCACA 59.165 39.130 0.00 0.00 0.00 4.17
5867 9003 4.180817 CCAAAAGGAAAACAGAACCACAC 58.819 43.478 0.00 0.00 0.00 3.82
5868 9004 4.180817 CAAAAGGAAAACAGAACCACACC 58.819 43.478 0.00 0.00 0.00 4.16
5869 9005 3.382083 AAGGAAAACAGAACCACACCT 57.618 42.857 0.00 0.00 0.00 4.00
5870 9006 2.932261 AGGAAAACAGAACCACACCTC 58.068 47.619 0.00 0.00 0.00 3.85
5871 9007 2.509964 AGGAAAACAGAACCACACCTCT 59.490 45.455 0.00 0.00 0.00 3.69
5872 9008 2.879026 GGAAAACAGAACCACACCTCTC 59.121 50.000 0.00 0.00 0.00 3.20
5873 9009 2.640316 AAACAGAACCACACCTCTCC 57.360 50.000 0.00 0.00 0.00 3.71
5874 9010 0.393077 AACAGAACCACACCTCTCCG 59.607 55.000 0.00 0.00 0.00 4.63
5875 9011 0.469331 ACAGAACCACACCTCTCCGA 60.469 55.000 0.00 0.00 0.00 4.55
5876 9012 0.679505 CAGAACCACACCTCTCCGAA 59.320 55.000 0.00 0.00 0.00 4.30
5877 9013 0.680061 AGAACCACACCTCTCCGAAC 59.320 55.000 0.00 0.00 0.00 3.95
5878 9014 0.320508 GAACCACACCTCTCCGAACC 60.321 60.000 0.00 0.00 0.00 3.62
5879 9015 1.052124 AACCACACCTCTCCGAACCA 61.052 55.000 0.00 0.00 0.00 3.67
5880 9016 1.052124 ACCACACCTCTCCGAACCAA 61.052 55.000 0.00 0.00 0.00 3.67
5881 9017 0.320771 CCACACCTCTCCGAACCAAG 60.321 60.000 0.00 0.00 0.00 3.61
5882 9018 0.951040 CACACCTCTCCGAACCAAGC 60.951 60.000 0.00 0.00 0.00 4.01
5883 9019 1.371183 CACCTCTCCGAACCAAGCA 59.629 57.895 0.00 0.00 0.00 3.91
5884 9020 0.671781 CACCTCTCCGAACCAAGCAG 60.672 60.000 0.00 0.00 0.00 4.24
5885 9021 0.832135 ACCTCTCCGAACCAAGCAGA 60.832 55.000 0.00 0.00 0.00 4.26
5886 9022 0.108424 CCTCTCCGAACCAAGCAGAG 60.108 60.000 0.00 0.00 0.00 3.35
5887 9023 0.605589 CTCTCCGAACCAAGCAGAGT 59.394 55.000 0.00 0.00 0.00 3.24
5888 9024 1.819288 CTCTCCGAACCAAGCAGAGTA 59.181 52.381 0.00 0.00 0.00 2.59
5889 9025 1.819288 TCTCCGAACCAAGCAGAGTAG 59.181 52.381 0.00 0.00 0.00 2.57
5890 9026 1.546476 CTCCGAACCAAGCAGAGTAGT 59.454 52.381 0.00 0.00 0.00 2.73
5891 9027 1.968493 TCCGAACCAAGCAGAGTAGTT 59.032 47.619 0.00 0.00 0.00 2.24
5892 9028 2.367567 TCCGAACCAAGCAGAGTAGTTT 59.632 45.455 0.00 0.00 0.00 2.66
5893 9029 3.139077 CCGAACCAAGCAGAGTAGTTTT 58.861 45.455 0.00 0.00 0.00 2.43
5894 9030 3.564225 CCGAACCAAGCAGAGTAGTTTTT 59.436 43.478 0.00 0.00 0.00 1.94
5918 9054 9.771534 TTTTCCTTTTTCTTTTGAGAAACTTGA 57.228 25.926 1.35 0.00 37.50 3.02
5919 9055 8.986477 TTCCTTTTTCTTTTGAGAAACTTGAG 57.014 30.769 1.35 0.00 37.50 3.02
5920 9056 7.035612 TCCTTTTTCTTTTGAGAAACTTGAGC 58.964 34.615 1.35 0.00 37.50 4.26
5921 9057 7.038048 CCTTTTTCTTTTGAGAAACTTGAGCT 58.962 34.615 1.35 0.00 37.50 4.09
5922 9058 7.547019 CCTTTTTCTTTTGAGAAACTTGAGCTT 59.453 33.333 1.35 0.00 37.50 3.74
5923 9059 8.466086 TTTTTCTTTTGAGAAACTTGAGCTTC 57.534 30.769 1.35 0.00 37.50 3.86
5924 9060 7.396540 TTTCTTTTGAGAAACTTGAGCTTCT 57.603 32.000 0.00 0.00 33.58 2.85
5925 9061 7.396540 TTCTTTTGAGAAACTTGAGCTTCTT 57.603 32.000 0.00 0.00 31.30 2.52
5926 9062 7.396540 TCTTTTGAGAAACTTGAGCTTCTTT 57.603 32.000 0.00 0.00 31.30 2.52
5927 9063 8.506168 TCTTTTGAGAAACTTGAGCTTCTTTA 57.494 30.769 0.00 0.00 31.30 1.85
5928 9064 8.398665 TCTTTTGAGAAACTTGAGCTTCTTTAC 58.601 33.333 0.00 0.00 31.30 2.01
5929 9065 5.907197 TGAGAAACTTGAGCTTCTTTACG 57.093 39.130 0.00 0.00 31.30 3.18
5930 9066 5.357257 TGAGAAACTTGAGCTTCTTTACGT 58.643 37.500 0.00 0.00 31.30 3.57
5931 9067 5.815740 TGAGAAACTTGAGCTTCTTTACGTT 59.184 36.000 0.00 0.00 31.30 3.99
5932 9068 6.315393 TGAGAAACTTGAGCTTCTTTACGTTT 59.685 34.615 0.00 0.00 31.30 3.60
5933 9069 7.085052 AGAAACTTGAGCTTCTTTACGTTTT 57.915 32.000 0.00 0.00 26.81 2.43
5934 9070 7.535997 AGAAACTTGAGCTTCTTTACGTTTTT 58.464 30.769 0.00 0.00 26.81 1.94
6026 9162 9.849166 TTTTAAAGTTTCTTTCGAGACAAATGT 57.151 25.926 0.00 0.00 0.00 2.71
6027 9163 9.849166 TTTAAAGTTTCTTTCGAGACAAATGTT 57.151 25.926 0.00 0.00 0.00 2.71
6028 9164 9.849166 TTAAAGTTTCTTTCGAGACAAATGTTT 57.151 25.926 0.00 0.00 0.00 2.83
6029 9165 8.757164 AAAGTTTCTTTCGAGACAAATGTTTT 57.243 26.923 0.00 0.00 0.00 2.43
6030 9166 8.757164 AAGTTTCTTTCGAGACAAATGTTTTT 57.243 26.923 0.00 0.00 0.00 1.94
6082 9218 8.658840 TTTTAGGGGTGCTTCTTTATTTATGT 57.341 30.769 0.00 0.00 0.00 2.29
6083 9219 8.658840 TTTAGGGGTGCTTCTTTATTTATGTT 57.341 30.769 0.00 0.00 0.00 2.71
6084 9220 8.658840 TTAGGGGTGCTTCTTTATTTATGTTT 57.341 30.769 0.00 0.00 0.00 2.83
6085 9221 7.553504 AGGGGTGCTTCTTTATTTATGTTTT 57.446 32.000 0.00 0.00 0.00 2.43
6086 9222 7.973402 AGGGGTGCTTCTTTATTTATGTTTTT 58.027 30.769 0.00 0.00 0.00 1.94
6106 9242 1.722011 TTTAGCGACAACAGCTAGGC 58.278 50.000 0.00 0.00 46.33 3.93
6107 9243 0.895530 TTAGCGACAACAGCTAGGCT 59.104 50.000 0.00 0.00 46.33 4.58
6108 9244 0.895530 TAGCGACAACAGCTAGGCTT 59.104 50.000 0.00 0.00 44.05 4.35
6109 9245 0.035458 AGCGACAACAGCTAGGCTTT 59.965 50.000 0.00 0.00 44.05 3.51
6110 9246 1.275291 AGCGACAACAGCTAGGCTTTA 59.725 47.619 0.00 0.00 44.05 1.85
6111 9247 2.093447 AGCGACAACAGCTAGGCTTTAT 60.093 45.455 0.00 0.00 44.05 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.650266 TGCCACAACATTATAACGAGGAAAT 59.350 36.000 0.00 0.00 0.00 2.17
66 72 0.821711 CAAAAGGACCAACGCCCTCA 60.822 55.000 0.00 0.00 31.17 3.86
67 73 0.822121 ACAAAAGGACCAACGCCCTC 60.822 55.000 0.00 0.00 31.17 4.30
76 82 5.123979 AGCGAATCTATCAAACAAAAGGACC 59.876 40.000 0.00 0.00 0.00 4.46
79 85 6.611381 TCAAGCGAATCTATCAAACAAAAGG 58.389 36.000 0.00 0.00 0.00 3.11
90 96 4.130118 AGCGGAATTTCAAGCGAATCTAT 58.870 39.130 9.44 0.00 34.34 1.98
99 105 7.614674 GCTAAAATATGAGCGGAATTTCAAG 57.385 36.000 0.00 0.00 0.00 3.02
119 125 2.164827 TGACACCTTAATCGAGCGCTAA 59.835 45.455 11.50 0.95 0.00 3.09
120 126 1.746787 TGACACCTTAATCGAGCGCTA 59.253 47.619 11.50 0.00 0.00 4.26
142 148 7.148490 CCGAACAATAAAAATTGATGGGGAAAC 60.148 37.037 5.18 0.00 31.74 2.78
143 149 6.876257 CCGAACAATAAAAATTGATGGGGAAA 59.124 34.615 5.18 0.00 31.74 3.13
153 159 9.936759 ATTTATGTGTCCCGAACAATAAAAATT 57.063 25.926 14.34 0.00 40.31 1.82
181 187 4.695455 TGGCTGAGACCGAAAAAGAAATAG 59.305 41.667 0.00 0.00 0.00 1.73
183 189 3.486383 TGGCTGAGACCGAAAAAGAAAT 58.514 40.909 0.00 0.00 0.00 2.17
215 222 4.660938 ACCCAACCTTGAGCGGGC 62.661 66.667 0.00 0.00 42.97 6.13
218 225 1.654220 CACAACCCAACCTTGAGCG 59.346 57.895 0.00 0.00 0.00 5.03
232 239 4.028490 CCGGCAGTAGGGGCACAA 62.028 66.667 0.00 0.00 0.00 3.33
242 251 3.266686 TACATGCAAGCCCGGCAGT 62.267 57.895 13.15 0.00 45.68 4.40
244 253 2.438254 CTACATGCAAGCCCGGCA 60.438 61.111 13.15 0.00 46.66 5.69
246 255 2.124570 AGCTACATGCAAGCCCGG 60.125 61.111 15.13 0.00 45.94 5.73
316 325 2.685897 CAAAAGAAACTCAACCCGTCCA 59.314 45.455 0.00 0.00 0.00 4.02
319 328 3.317993 CCATCAAAAGAAACTCAACCCGT 59.682 43.478 0.00 0.00 0.00 5.28
352 361 6.119536 ACCTGCTCGGATTTATTGTAAATCA 58.880 36.000 18.73 4.45 38.15 2.57
456 3134 5.192927 GGTTGATGGTGGATTTCAGTATCA 58.807 41.667 0.00 0.00 31.29 2.15
468 3146 2.638480 ATATGGTCGGTTGATGGTGG 57.362 50.000 0.00 0.00 0.00 4.61
469 3147 4.439974 CCAAAATATGGTCGGTTGATGGTG 60.440 45.833 0.00 0.00 44.85 4.17
512 3190 0.953727 TCTTCACAAGTGTGCCATGC 59.046 50.000 6.56 0.00 45.25 4.06
515 3193 2.288666 GAACTCTTCACAAGTGTGCCA 58.711 47.619 6.56 0.00 45.25 4.92
784 3493 0.340208 AGGAAGGTGAGGTAGAGGGG 59.660 60.000 0.00 0.00 0.00 4.79
790 3499 0.338814 GGGGAGAGGAAGGTGAGGTA 59.661 60.000 0.00 0.00 0.00 3.08
791 3500 1.081277 GGGGAGAGGAAGGTGAGGT 59.919 63.158 0.00 0.00 0.00 3.85
859 3583 1.536418 TGGAGTGGACACCAGGAGG 60.536 63.158 0.00 0.00 42.21 4.30
860 3584 0.833834 AGTGGAGTGGACACCAGGAG 60.834 60.000 0.00 0.00 37.28 3.69
861 3585 0.832135 GAGTGGAGTGGACACCAGGA 60.832 60.000 0.00 0.00 37.28 3.86
862 3586 1.674057 GAGTGGAGTGGACACCAGG 59.326 63.158 0.00 0.00 37.28 4.45
863 3587 1.290324 CGAGTGGAGTGGACACCAG 59.710 63.158 0.00 0.00 37.28 4.00
864 3588 2.867855 GCGAGTGGAGTGGACACCA 61.868 63.158 0.00 0.00 39.63 4.17
897 3621 3.557264 GGGTCGGTCAAGATTCAAGAACT 60.557 47.826 0.00 0.00 0.00 3.01
900 3624 1.067142 CGGGTCGGTCAAGATTCAAGA 60.067 52.381 0.00 0.00 0.00 3.02
955 3693 2.125512 CAGCTCGTAGCCACCACC 60.126 66.667 3.66 0.00 43.77 4.61
1133 3880 2.027385 GCACAGAGGGGGATTCAATTC 58.973 52.381 0.00 0.00 0.00 2.17
1138 3885 1.213296 TTAGGCACAGAGGGGGATTC 58.787 55.000 0.00 0.00 0.00 2.52
1139 3886 1.912862 ATTAGGCACAGAGGGGGATT 58.087 50.000 0.00 0.00 0.00 3.01
1153 3900 3.127425 CCTAGGAAAGGGCGAATTAGG 57.873 52.381 1.05 0.00 42.32 2.69
1197 3944 0.528684 CGGATGAAGAAGCCTCGTCC 60.529 60.000 1.63 1.63 36.48 4.79
1299 4056 2.475339 ATCTCTGGACTCCTGAGCAT 57.525 50.000 21.78 14.91 45.33 3.79
1312 4069 4.924462 CAGTGGATCATCATCGAATCTCTG 59.076 45.833 0.00 0.00 0.00 3.35
1321 4078 4.252073 GGATAGCACAGTGGATCATCATC 58.748 47.826 1.84 0.00 0.00 2.92
1322 4079 3.008813 GGGATAGCACAGTGGATCATCAT 59.991 47.826 1.84 0.00 0.00 2.45
1323 4080 2.369860 GGGATAGCACAGTGGATCATCA 59.630 50.000 1.84 0.00 0.00 3.07
1343 4100 3.790437 AGAGCATGTCGGGCCAGG 61.790 66.667 4.39 0.00 0.00 4.45
1427 4184 8.718102 AACAGCGATGTGAACTAGTATATTTT 57.282 30.769 7.27 0.00 0.00 1.82
1450 4208 3.994204 TTTAAGGCCAAGAAACCGAAC 57.006 42.857 5.01 0.00 0.00 3.95
1578 4336 6.154192 TGAATAGATGCTTGCCCAATTTACAA 59.846 34.615 0.00 0.00 0.00 2.41
1586 4344 2.025981 ACTGTGAATAGATGCTTGCCCA 60.026 45.455 0.00 0.00 0.00 5.36
1653 4420 2.123683 TTGGGCTGCAAAACGGGA 60.124 55.556 0.50 0.00 0.00 5.14
1780 4547 5.049612 GTCTACCAGCTTTGTGGAAACTTAC 60.050 44.000 1.32 0.00 40.44 2.34
1895 4662 8.717821 CCGATATGACCGTGTGAATTATTTAAT 58.282 33.333 0.00 0.00 0.00 1.40
1896 4663 7.711772 ACCGATATGACCGTGTGAATTATTTAA 59.288 33.333 0.00 0.00 0.00 1.52
1897 4664 7.211573 ACCGATATGACCGTGTGAATTATTTA 58.788 34.615 0.00 0.00 0.00 1.40
1898 4665 6.053005 ACCGATATGACCGTGTGAATTATTT 58.947 36.000 0.00 0.00 0.00 1.40
1899 4666 5.607477 ACCGATATGACCGTGTGAATTATT 58.393 37.500 0.00 0.00 0.00 1.40
1900 4667 5.209818 ACCGATATGACCGTGTGAATTAT 57.790 39.130 0.00 0.00 0.00 1.28
1901 4668 4.659111 ACCGATATGACCGTGTGAATTA 57.341 40.909 0.00 0.00 0.00 1.40
1902 4669 3.536956 ACCGATATGACCGTGTGAATT 57.463 42.857 0.00 0.00 0.00 2.17
1983 4750 4.386711 TGAGAGCCAATGATGATAAGCAG 58.613 43.478 0.00 0.00 0.00 4.24
2081 4944 0.693049 AATGGTCAGAGGTGGTGGAC 59.307 55.000 0.00 0.00 0.00 4.02
2111 4974 0.460459 TCCACACGAACAGCGAAACA 60.460 50.000 0.00 0.00 44.57 2.83
2131 4996 7.039293 ACCCAATTAAGTTAAGGTGAATGGTTC 60.039 37.037 9.59 0.00 0.00 3.62
2223 5088 6.533012 TCATCAATCTACGAAAGCAGAAGAAG 59.467 38.462 0.00 0.00 37.00 2.85
2258 5123 5.306678 AGATCTGTGGTTCATAATCTCCCTC 59.693 44.000 0.00 0.00 0.00 4.30
2401 5266 5.817296 CGAAAATCATTGGACTGAGGTATCA 59.183 40.000 0.00 0.00 0.00 2.15
2403 5268 5.104527 TCCGAAAATCATTGGACTGAGGTAT 60.105 40.000 0.00 0.00 0.00 2.73
2608 5476 5.424121 ACACTGCTGTTATGAAGTTTGAC 57.576 39.130 0.00 0.00 0.00 3.18
2622 5490 6.528014 TTGAATGCATTTTAAACACTGCTG 57.472 33.333 14.33 0.00 35.66 4.41
2673 5541 2.863970 TTTTTGGGGGAGAGGGGGC 61.864 63.158 0.00 0.00 0.00 5.80
2674 5542 3.614192 TTTTTGGGGGAGAGGGGG 58.386 61.111 0.00 0.00 0.00 5.40
2964 6027 4.281898 ACCATATACGCAATAAGGGTCC 57.718 45.455 5.08 0.00 43.11 4.46
3251 6318 2.794028 GGTGTCCTACTAGGCCGCC 61.794 68.421 0.00 0.00 36.68 6.13
3252 6319 1.400530 ATGGTGTCCTACTAGGCCGC 61.401 60.000 0.00 0.00 34.61 6.53
3253 6320 1.887198 CTATGGTGTCCTACTAGGCCG 59.113 57.143 0.00 0.00 34.61 6.13
3753 6825 4.280929 GGGAGTTAGCACAACCTGAAAAAT 59.719 41.667 0.00 0.00 0.00 1.82
4232 7315 9.388672 AGATAAATGGGTAAGTATACTGGCTTA 57.611 33.333 6.06 0.00 32.36 3.09
4386 7505 4.761739 GGTGAAGGATCATGAACACTTGAA 59.238 41.667 12.75 1.76 38.01 2.69
4466 7594 3.743521 GCCCACAAGCATCACATATAGA 58.256 45.455 0.00 0.00 0.00 1.98
4563 7691 3.213206 TGGAATGAGGATATGGTGCAC 57.787 47.619 8.80 8.80 0.00 4.57
4603 7736 5.149976 ACTCCCAAGCATAATTAATGGCAT 58.850 37.500 0.00 0.00 35.99 4.40
4685 7818 2.710377 CACTCCATTGAAATCCGGACA 58.290 47.619 6.12 0.00 0.00 4.02
4756 7889 3.806949 AACATAGCTGTTTGGGGAGAA 57.193 42.857 0.00 0.00 43.05 2.87
4789 7922 4.009675 GGTGAGAATGCAGGTATTCAACA 58.990 43.478 11.72 8.63 39.08 3.33
5021 8154 2.366167 CTCCCTAGCCCAGGCACT 60.366 66.667 12.03 0.00 43.98 4.40
5060 8193 0.179174 CGACGTCCACATCGACATCA 60.179 55.000 10.58 0.00 40.86 3.07
5063 8196 1.500396 CTCGACGTCCACATCGACA 59.500 57.895 10.58 0.00 42.18 4.35
5069 8202 2.916052 GCTGTCCTCGACGTCCACA 61.916 63.158 10.58 7.01 34.95 4.17
5071 8204 3.733960 CGCTGTCCTCGACGTCCA 61.734 66.667 10.58 0.00 34.95 4.02
5090 8223 1.061729 CAACGCGCACACAAAGTCA 59.938 52.632 5.73 0.00 0.00 3.41
5182 8315 3.243839 CCACAACCCTCTGAAACAAATGG 60.244 47.826 0.00 0.00 0.00 3.16
5184 8317 3.384467 CACCACAACCCTCTGAAACAAAT 59.616 43.478 0.00 0.00 0.00 2.32
5202 8335 4.646572 TGTAATCATACAACAGCACACCA 58.353 39.130 0.00 0.00 39.06 4.17
5238 8372 1.068474 AGCATCACTACGAACAACGC 58.932 50.000 0.00 0.00 46.94 4.84
5336 8472 0.110823 CGTAAACTGCCGAAGCACAC 60.111 55.000 0.00 0.00 46.52 3.82
5354 8490 2.416162 GCTTCTGGACTACCTTCTGACG 60.416 54.545 0.00 0.00 37.04 4.35
5355 8491 2.416162 CGCTTCTGGACTACCTTCTGAC 60.416 54.545 0.00 0.00 37.04 3.51
5357 8493 1.134965 CCGCTTCTGGACTACCTTCTG 60.135 57.143 0.00 0.00 37.04 3.02
5359 8495 1.183549 TCCGCTTCTGGACTACCTTC 58.816 55.000 0.00 0.00 37.04 3.46
5360 8496 1.482593 CATCCGCTTCTGGACTACCTT 59.517 52.381 0.00 0.00 41.85 3.50
5361 8497 1.115467 CATCCGCTTCTGGACTACCT 58.885 55.000 0.00 0.00 41.85 3.08
5362 8498 0.530870 GCATCCGCTTCTGGACTACC 60.531 60.000 0.00 0.00 41.85 3.18
5363 8499 0.175760 TGCATCCGCTTCTGGACTAC 59.824 55.000 0.00 0.00 41.85 2.73
5365 8501 0.036732 TTTGCATCCGCTTCTGGACT 59.963 50.000 0.00 0.00 41.85 3.85
5366 8502 1.098050 ATTTGCATCCGCTTCTGGAC 58.902 50.000 0.00 0.00 41.85 4.02
5367 8503 1.473677 CAATTTGCATCCGCTTCTGGA 59.526 47.619 0.00 0.00 43.58 3.86
5368 8504 1.203052 ACAATTTGCATCCGCTTCTGG 59.797 47.619 0.00 0.00 39.64 3.86
5369 8505 2.256174 CACAATTTGCATCCGCTTCTG 58.744 47.619 0.00 0.00 39.64 3.02
5381 8517 5.281693 TCGTTGATGTAGAGCACAATTTG 57.718 39.130 0.00 0.00 41.55 2.32
5383 8519 7.792374 AATATCGTTGATGTAGAGCACAATT 57.208 32.000 0.00 0.00 41.55 2.32
5384 8520 7.495606 TCAAATATCGTTGATGTAGAGCACAAT 59.504 33.333 0.00 0.00 41.55 2.71
5385 8521 6.816140 TCAAATATCGTTGATGTAGAGCACAA 59.184 34.615 0.00 0.00 41.55 3.33
5386 8522 6.337356 TCAAATATCGTTGATGTAGAGCACA 58.663 36.000 0.00 0.00 42.69 4.57
5387 8523 6.828502 TCAAATATCGTTGATGTAGAGCAC 57.171 37.500 0.00 0.00 32.56 4.40
5388 8524 7.763985 TCTTTCAAATATCGTTGATGTAGAGCA 59.236 33.333 0.00 0.00 37.36 4.26
5389 8525 8.058915 GTCTTTCAAATATCGTTGATGTAGAGC 58.941 37.037 0.00 0.00 37.36 4.09
5391 8527 7.971722 TCGTCTTTCAAATATCGTTGATGTAGA 59.028 33.333 0.00 0.00 37.36 2.59
5392 8528 8.115491 TCGTCTTTCAAATATCGTTGATGTAG 57.885 34.615 0.00 0.00 37.36 2.74
5393 8529 8.468720 TTCGTCTTTCAAATATCGTTGATGTA 57.531 30.769 0.00 0.00 37.36 2.29
5394 8530 6.961359 TCGTCTTTCAAATATCGTTGATGT 57.039 33.333 0.00 0.00 37.36 3.06
5395 8531 8.727733 CATTTCGTCTTTCAAATATCGTTGATG 58.272 33.333 0.00 0.00 37.36 3.07
5396 8532 8.450964 ACATTTCGTCTTTCAAATATCGTTGAT 58.549 29.630 0.00 0.00 37.36 2.57
5397 8533 7.744276 CACATTTCGTCTTTCAAATATCGTTGA 59.256 33.333 0.00 0.00 35.72 3.18
5398 8534 7.533900 ACACATTTCGTCTTTCAAATATCGTTG 59.466 33.333 0.00 0.00 0.00 4.10
5399 8535 7.533900 CACACATTTCGTCTTTCAAATATCGTT 59.466 33.333 0.00 0.00 0.00 3.85
5401 8537 6.022251 GCACACATTTCGTCTTTCAAATATCG 60.022 38.462 0.00 0.00 0.00 2.92
5403 8539 6.803320 CAGCACACATTTCGTCTTTCAAATAT 59.197 34.615 0.00 0.00 0.00 1.28
5404 8540 6.142139 CAGCACACATTTCGTCTTTCAAATA 58.858 36.000 0.00 0.00 0.00 1.40
5405 8541 4.977963 CAGCACACATTTCGTCTTTCAAAT 59.022 37.500 0.00 0.00 0.00 2.32
5406 8542 4.350346 CAGCACACATTTCGTCTTTCAAA 58.650 39.130 0.00 0.00 0.00 2.69
5407 8543 3.243035 CCAGCACACATTTCGTCTTTCAA 60.243 43.478 0.00 0.00 0.00 2.69
5408 8544 2.290367 CCAGCACACATTTCGTCTTTCA 59.710 45.455 0.00 0.00 0.00 2.69
5409 8545 2.350772 CCCAGCACACATTTCGTCTTTC 60.351 50.000 0.00 0.00 0.00 2.62
5410 8546 1.608590 CCCAGCACACATTTCGTCTTT 59.391 47.619 0.00 0.00 0.00 2.52
5411 8547 1.238439 CCCAGCACACATTTCGTCTT 58.762 50.000 0.00 0.00 0.00 3.01
5412 8548 0.108585 ACCCAGCACACATTTCGTCT 59.891 50.000 0.00 0.00 0.00 4.18
5413 8549 0.951558 AACCCAGCACACATTTCGTC 59.048 50.000 0.00 0.00 0.00 4.20
5414 8550 0.951558 GAACCCAGCACACATTTCGT 59.048 50.000 0.00 0.00 0.00 3.85
5415 8551 0.110238 CGAACCCAGCACACATTTCG 60.110 55.000 0.00 0.00 0.00 3.46
5416 8552 0.951558 ACGAACCCAGCACACATTTC 59.048 50.000 0.00 0.00 0.00 2.17
5417 8553 0.667993 CACGAACCCAGCACACATTT 59.332 50.000 0.00 0.00 0.00 2.32
5418 8554 1.172180 CCACGAACCCAGCACACATT 61.172 55.000 0.00 0.00 0.00 2.71
5419 8555 1.600636 CCACGAACCCAGCACACAT 60.601 57.895 0.00 0.00 0.00 3.21
5421 8557 0.949105 CTACCACGAACCCAGCACAC 60.949 60.000 0.00 0.00 0.00 3.82
5423 8559 0.249398 ATCTACCACGAACCCAGCAC 59.751 55.000 0.00 0.00 0.00 4.40
5426 8562 1.191535 TCCATCTACCACGAACCCAG 58.808 55.000 0.00 0.00 0.00 4.45
5428 8564 1.202651 CCATCCATCTACCACGAACCC 60.203 57.143 0.00 0.00 0.00 4.11
5430 8566 1.134521 TGCCATCCATCTACCACGAAC 60.135 52.381 0.00 0.00 0.00 3.95
5433 8569 1.202687 ACATGCCATCCATCTACCACG 60.203 52.381 0.00 0.00 29.71 4.94
5434 8570 2.645838 ACATGCCATCCATCTACCAC 57.354 50.000 0.00 0.00 29.71 4.16
5436 8572 3.009473 ACCATACATGCCATCCATCTACC 59.991 47.826 0.00 0.00 29.71 3.18
5438 8574 4.999469 AACCATACATGCCATCCATCTA 57.001 40.909 0.00 0.00 29.71 1.98
5441 8577 4.549668 AGAAAACCATACATGCCATCCAT 58.450 39.130 0.00 0.00 33.39 3.41
5442 8578 3.953612 GAGAAAACCATACATGCCATCCA 59.046 43.478 0.00 0.00 0.00 3.41
5443 8579 3.319122 GGAGAAAACCATACATGCCATCC 59.681 47.826 0.00 0.00 0.00 3.51
5445 8581 4.255510 AGGAGAAAACCATACATGCCAT 57.744 40.909 0.00 0.00 0.00 4.40
5446 8582 3.737559 AGGAGAAAACCATACATGCCA 57.262 42.857 0.00 0.00 0.00 4.92
5448 8584 4.278678 CGAAGGAGAAAACCATACATGC 57.721 45.455 0.00 0.00 0.00 4.06
5465 8601 1.396301 ACTACGACTAAGACGCCGAAG 59.604 52.381 0.00 0.00 0.00 3.79
5466 8602 1.442769 ACTACGACTAAGACGCCGAA 58.557 50.000 0.00 0.00 0.00 4.30
5467 8603 2.196749 CTACTACGACTAAGACGCCGA 58.803 52.381 0.00 0.00 0.00 5.54
5468 8604 1.260033 CCTACTACGACTAAGACGCCG 59.740 57.143 0.00 0.00 0.00 6.46
5469 8605 1.601430 CCCTACTACGACTAAGACGCC 59.399 57.143 0.00 0.00 0.00 5.68
5470 8606 2.031437 CACCCTACTACGACTAAGACGC 59.969 54.545 0.00 0.00 0.00 5.19
5471 8607 3.265791 ACACCCTACTACGACTAAGACG 58.734 50.000 0.00 0.00 0.00 4.18
5472 8608 6.109359 TCTAACACCCTACTACGACTAAGAC 58.891 44.000 0.00 0.00 0.00 3.01
5473 8609 6.299805 TCTAACACCCTACTACGACTAAGA 57.700 41.667 0.00 0.00 0.00 2.10
5474 8610 6.991531 AGATCTAACACCCTACTACGACTAAG 59.008 42.308 0.00 0.00 0.00 2.18
5475 8611 6.893583 AGATCTAACACCCTACTACGACTAA 58.106 40.000 0.00 0.00 0.00 2.24
5476 8612 6.491714 AGATCTAACACCCTACTACGACTA 57.508 41.667 0.00 0.00 0.00 2.59
5477 8613 5.370875 AGATCTAACACCCTACTACGACT 57.629 43.478 0.00 0.00 0.00 4.18
5478 8614 6.765512 ACTAAGATCTAACACCCTACTACGAC 59.234 42.308 0.00 0.00 0.00 4.34
5479 8615 6.893583 ACTAAGATCTAACACCCTACTACGA 58.106 40.000 0.00 0.00 0.00 3.43
5480 8616 7.565323 AACTAAGATCTAACACCCTACTACG 57.435 40.000 0.00 0.00 0.00 3.51
5481 8617 8.964772 TCAAACTAAGATCTAACACCCTACTAC 58.035 37.037 0.00 0.00 0.00 2.73
5482 8618 9.710818 ATCAAACTAAGATCTAACACCCTACTA 57.289 33.333 0.00 0.00 0.00 1.82
5483 8619 8.611051 ATCAAACTAAGATCTAACACCCTACT 57.389 34.615 0.00 0.00 0.00 2.57
5484 8620 9.968870 CTATCAAACTAAGATCTAACACCCTAC 57.031 37.037 0.00 0.00 0.00 3.18
5485 8621 8.639761 GCTATCAAACTAAGATCTAACACCCTA 58.360 37.037 0.00 0.00 0.00 3.53
5486 8622 7.345914 AGCTATCAAACTAAGATCTAACACCCT 59.654 37.037 0.00 0.00 0.00 4.34
5487 8623 7.501844 AGCTATCAAACTAAGATCTAACACCC 58.498 38.462 0.00 0.00 0.00 4.61
5488 8624 8.198109 TGAGCTATCAAACTAAGATCTAACACC 58.802 37.037 0.00 0.00 30.61 4.16
5489 8625 9.026074 GTGAGCTATCAAACTAAGATCTAACAC 57.974 37.037 0.00 0.00 37.14 3.32
5490 8626 8.198109 GGTGAGCTATCAAACTAAGATCTAACA 58.802 37.037 0.00 0.00 37.14 2.41
5491 8627 8.417884 AGGTGAGCTATCAAACTAAGATCTAAC 58.582 37.037 0.00 0.00 37.14 2.34
5492 8628 8.540507 AGGTGAGCTATCAAACTAAGATCTAA 57.459 34.615 0.00 0.00 37.14 2.10
5493 8629 8.540507 AAGGTGAGCTATCAAACTAAGATCTA 57.459 34.615 0.00 0.00 37.14 1.98
5494 8630 7.430760 AAGGTGAGCTATCAAACTAAGATCT 57.569 36.000 0.00 0.00 37.14 2.75
5495 8631 7.011857 CCAAAGGTGAGCTATCAAACTAAGATC 59.988 40.741 0.00 0.00 37.14 2.75
5496 8632 6.825721 CCAAAGGTGAGCTATCAAACTAAGAT 59.174 38.462 0.00 0.00 37.14 2.40
5497 8633 6.173339 CCAAAGGTGAGCTATCAAACTAAGA 58.827 40.000 0.00 0.00 37.14 2.10
5498 8634 5.940470 ACCAAAGGTGAGCTATCAAACTAAG 59.060 40.000 0.00 0.00 37.14 2.18
5499 8635 5.876357 ACCAAAGGTGAGCTATCAAACTAA 58.124 37.500 0.00 0.00 37.14 2.24
5500 8636 5.499004 ACCAAAGGTGAGCTATCAAACTA 57.501 39.130 0.00 0.00 37.14 2.24
5501 8637 4.373156 ACCAAAGGTGAGCTATCAAACT 57.627 40.909 0.00 0.00 37.14 2.66
5529 8665 1.734465 CTGCTTTGCGAACCTCTAAGG 59.266 52.381 0.00 0.00 42.49 2.69
5530 8666 1.129437 GCTGCTTTGCGAACCTCTAAG 59.871 52.381 0.00 0.00 0.00 2.18
5531 8667 1.156736 GCTGCTTTGCGAACCTCTAA 58.843 50.000 0.00 0.00 0.00 2.10
5532 8668 0.034756 TGCTGCTTTGCGAACCTCTA 59.965 50.000 0.00 0.00 35.36 2.43
5533 8669 0.607489 ATGCTGCTTTGCGAACCTCT 60.607 50.000 0.00 0.00 35.36 3.69
5534 8670 1.086696 TATGCTGCTTTGCGAACCTC 58.913 50.000 0.00 0.00 35.36 3.85
5535 8671 1.755179 ATATGCTGCTTTGCGAACCT 58.245 45.000 0.00 0.00 35.36 3.50
5536 8672 2.566952 AATATGCTGCTTTGCGAACC 57.433 45.000 0.00 0.00 35.36 3.62
5537 8673 3.038710 GCTAATATGCTGCTTTGCGAAC 58.961 45.455 0.00 0.00 35.36 3.95
5538 8674 2.286359 CGCTAATATGCTGCTTTGCGAA 60.286 45.455 18.51 0.00 45.13 4.70
5539 8675 1.261354 CGCTAATATGCTGCTTTGCGA 59.739 47.619 18.51 0.00 45.13 5.10
5540 8676 1.261354 TCGCTAATATGCTGCTTTGCG 59.739 47.619 17.68 17.68 44.19 4.85
5541 8677 2.644078 GTCGCTAATATGCTGCTTTGC 58.356 47.619 0.00 0.00 0.00 3.68
5542 8678 2.285220 ACGTCGCTAATATGCTGCTTTG 59.715 45.455 0.00 0.00 0.00 2.77
5543 8679 2.550978 ACGTCGCTAATATGCTGCTTT 58.449 42.857 0.00 0.00 0.00 3.51
5544 8680 2.225068 ACGTCGCTAATATGCTGCTT 57.775 45.000 0.00 0.00 0.00 3.91
5545 8681 3.364889 TTACGTCGCTAATATGCTGCT 57.635 42.857 0.00 0.00 0.00 4.24
5546 8682 3.428870 ACATTACGTCGCTAATATGCTGC 59.571 43.478 0.00 0.00 0.00 5.25
5547 8683 5.178660 GACATTACGTCGCTAATATGCTG 57.821 43.478 0.00 0.00 34.19 4.41
5559 8695 4.622313 TCACATAACAACCGACATTACGTC 59.378 41.667 0.00 0.00 41.62 4.34
5560 8696 4.386652 GTCACATAACAACCGACATTACGT 59.613 41.667 0.00 0.00 0.00 3.57
5561 8697 4.624024 AGTCACATAACAACCGACATTACG 59.376 41.667 0.00 0.00 0.00 3.18
5562 8698 6.073440 ACAAGTCACATAACAACCGACATTAC 60.073 38.462 0.00 0.00 0.00 1.89
5563 8699 5.992829 ACAAGTCACATAACAACCGACATTA 59.007 36.000 0.00 0.00 0.00 1.90
5564 8700 4.819630 ACAAGTCACATAACAACCGACATT 59.180 37.500 0.00 0.00 0.00 2.71
5565 8701 4.385825 ACAAGTCACATAACAACCGACAT 58.614 39.130 0.00 0.00 0.00 3.06
5566 8702 3.799366 ACAAGTCACATAACAACCGACA 58.201 40.909 0.00 0.00 0.00 4.35
5567 8703 5.910637 TTACAAGTCACATAACAACCGAC 57.089 39.130 0.00 0.00 0.00 4.79
5568 8704 7.226918 TCAAATTACAAGTCACATAACAACCGA 59.773 33.333 0.00 0.00 0.00 4.69
5569 8705 7.356540 TCAAATTACAAGTCACATAACAACCG 58.643 34.615 0.00 0.00 0.00 4.44
5570 8706 9.341899 GATCAAATTACAAGTCACATAACAACC 57.658 33.333 0.00 0.00 0.00 3.77
5591 8727 9.755804 GTGTCTCACTCATATCATAAAGATCAA 57.244 33.333 0.00 0.00 38.19 2.57
5592 8728 8.917088 TGTGTCTCACTCATATCATAAAGATCA 58.083 33.333 0.00 0.00 35.35 2.92
5593 8729 9.926158 ATGTGTCTCACTCATATCATAAAGATC 57.074 33.333 1.72 0.00 35.35 2.75
5603 8739 9.716531 CCATGTTAATATGTGTCTCACTCATAT 57.283 33.333 10.82 5.70 43.23 1.78
5604 8740 8.923270 TCCATGTTAATATGTGTCTCACTCATA 58.077 33.333 10.82 1.94 38.45 2.15
5605 8741 7.795047 TCCATGTTAATATGTGTCTCACTCAT 58.205 34.615 10.82 0.00 36.44 2.90
5606 8742 7.181569 TCCATGTTAATATGTGTCTCACTCA 57.818 36.000 10.82 0.00 35.11 3.41
5607 8743 8.492673 TTTCCATGTTAATATGTGTCTCACTC 57.507 34.615 10.82 0.00 35.11 3.51
5608 8744 8.862325 TTTTCCATGTTAATATGTGTCTCACT 57.138 30.769 10.82 0.00 35.11 3.41
5655 8791 1.682854 CTCCAACTGCAGCCTCAAAAA 59.317 47.619 15.27 0.00 0.00 1.94
5656 8792 1.321474 CTCCAACTGCAGCCTCAAAA 58.679 50.000 15.27 0.00 0.00 2.44
5657 8793 0.538057 CCTCCAACTGCAGCCTCAAA 60.538 55.000 15.27 0.00 0.00 2.69
5658 8794 1.073722 CCTCCAACTGCAGCCTCAA 59.926 57.895 15.27 0.00 0.00 3.02
5659 8795 2.752358 CCTCCAACTGCAGCCTCA 59.248 61.111 15.27 0.00 0.00 3.86
5660 8796 1.919600 ATCCCTCCAACTGCAGCCTC 61.920 60.000 15.27 0.00 0.00 4.70
5661 8797 1.919600 GATCCCTCCAACTGCAGCCT 61.920 60.000 15.27 0.00 0.00 4.58
5662 8798 1.452833 GATCCCTCCAACTGCAGCC 60.453 63.158 15.27 0.00 0.00 4.85
5663 8799 1.817099 CGATCCCTCCAACTGCAGC 60.817 63.158 15.27 0.00 0.00 5.25
5664 8800 0.460987 GACGATCCCTCCAACTGCAG 60.461 60.000 13.48 13.48 0.00 4.41
5665 8801 1.596934 GACGATCCCTCCAACTGCA 59.403 57.895 0.00 0.00 0.00 4.41
5666 8802 1.153349 GGACGATCCCTCCAACTGC 60.153 63.158 0.00 0.00 0.00 4.40
5667 8803 1.776662 TAGGACGATCCCTCCAACTG 58.223 55.000 6.81 0.00 37.19 3.16
5710 8846 7.704047 CGAGTAGTTTAGAATAGTACAAACCCC 59.296 40.741 0.00 0.00 32.52 4.95
5711 8847 8.246871 ACGAGTAGTTTAGAATAGTACAAACCC 58.753 37.037 0.00 0.00 32.52 4.11
5730 8866 5.697848 GTTGCAATACCAACTACGAGTAG 57.302 43.478 0.59 8.58 41.36 2.57
5739 8875 8.132995 ACTAGTTGTTTTAGTTGCAATACCAAC 58.867 33.333 0.59 10.20 44.12 3.77
5740 8876 8.228035 ACTAGTTGTTTTAGTTGCAATACCAA 57.772 30.769 0.59 0.00 0.00 3.67
5741 8877 7.811117 ACTAGTTGTTTTAGTTGCAATACCA 57.189 32.000 0.59 0.00 0.00 3.25
5746 8882 9.116067 ACTCAATACTAGTTGTTTTAGTTGCAA 57.884 29.630 0.00 0.00 33.60 4.08
5747 8883 8.671384 ACTCAATACTAGTTGTTTTAGTTGCA 57.329 30.769 0.00 0.00 33.60 4.08
5754 8890 9.239551 GGGGAAATACTCAATACTAGTTGTTTT 57.760 33.333 0.00 0.00 0.00 2.43
5755 8891 8.612145 AGGGGAAATACTCAATACTAGTTGTTT 58.388 33.333 0.00 0.00 0.00 2.83
5756 8892 8.159229 AGGGGAAATACTCAATACTAGTTGTT 57.841 34.615 0.00 0.00 0.00 2.83
5757 8893 7.750947 AGGGGAAATACTCAATACTAGTTGT 57.249 36.000 0.00 0.00 0.00 3.32
5758 8894 9.462606 AAAAGGGGAAATACTCAATACTAGTTG 57.537 33.333 0.00 0.00 0.00 3.16
5811 8947 9.838339 CATGAATACTCTAGTCACCCTAAAAAT 57.162 33.333 0.00 0.00 35.44 1.82
5812 8948 8.822805 ACATGAATACTCTAGTCACCCTAAAAA 58.177 33.333 0.00 0.00 35.44 1.94
5813 8949 8.375493 ACATGAATACTCTAGTCACCCTAAAA 57.625 34.615 0.00 0.00 35.44 1.52
5814 8950 7.973048 ACATGAATACTCTAGTCACCCTAAA 57.027 36.000 0.00 0.00 35.44 1.85
5815 8951 7.069578 GGAACATGAATACTCTAGTCACCCTAA 59.930 40.741 0.00 0.00 35.44 2.69
5816 8952 6.550108 GGAACATGAATACTCTAGTCACCCTA 59.450 42.308 0.00 0.00 35.44 3.53
5817 8953 5.364157 GGAACATGAATACTCTAGTCACCCT 59.636 44.000 0.00 0.00 35.44 4.34
5818 8954 5.128827 TGGAACATGAATACTCTAGTCACCC 59.871 44.000 0.00 0.00 35.44 4.61
5819 8955 6.222038 TGGAACATGAATACTCTAGTCACC 57.778 41.667 0.00 0.00 35.44 4.02
5820 8956 7.064728 GGTTTGGAACATGAATACTCTAGTCAC 59.935 40.741 0.00 0.00 39.30 3.67
5821 8957 7.103641 GGTTTGGAACATGAATACTCTAGTCA 58.896 38.462 0.00 0.00 39.30 3.41
5822 8958 7.103641 TGGTTTGGAACATGAATACTCTAGTC 58.896 38.462 0.00 0.00 39.30 2.59
5823 8959 7.016153 TGGTTTGGAACATGAATACTCTAGT 57.984 36.000 0.00 0.00 39.30 2.57
5824 8960 7.921786 TTGGTTTGGAACATGAATACTCTAG 57.078 36.000 0.00 0.00 39.30 2.43
5825 8961 8.698973 TTTTGGTTTGGAACATGAATACTCTA 57.301 30.769 0.00 0.00 39.30 2.43
5826 8962 7.255942 CCTTTTGGTTTGGAACATGAATACTCT 60.256 37.037 0.00 0.00 33.80 3.24
5827 8963 6.868339 CCTTTTGGTTTGGAACATGAATACTC 59.132 38.462 0.00 0.00 33.80 2.59
5828 8964 6.553100 TCCTTTTGGTTTGGAACATGAATACT 59.447 34.615 0.00 0.00 38.70 2.12
5829 8965 6.754193 TCCTTTTGGTTTGGAACATGAATAC 58.246 36.000 0.00 0.00 38.70 1.89
5830 8966 6.985653 TCCTTTTGGTTTGGAACATGAATA 57.014 33.333 0.00 0.00 38.70 1.75
5831 8967 5.885449 TCCTTTTGGTTTGGAACATGAAT 57.115 34.783 0.00 0.00 38.70 2.57
5832 8968 5.683876 TTCCTTTTGGTTTGGAACATGAA 57.316 34.783 0.00 0.00 38.70 2.57
5833 8969 5.683876 TTTCCTTTTGGTTTGGAACATGA 57.316 34.783 0.00 0.00 39.29 3.07
5834 8970 5.645497 TGTTTTCCTTTTGGTTTGGAACATG 59.355 36.000 0.00 0.00 39.29 3.21
5835 8971 5.810095 TGTTTTCCTTTTGGTTTGGAACAT 58.190 33.333 0.00 0.00 39.29 2.71
5836 8972 5.012148 TCTGTTTTCCTTTTGGTTTGGAACA 59.988 36.000 0.00 0.00 39.29 3.18
5837 8973 5.483811 TCTGTTTTCCTTTTGGTTTGGAAC 58.516 37.500 0.00 0.00 39.29 3.62
5838 8974 5.746990 TCTGTTTTCCTTTTGGTTTGGAA 57.253 34.783 0.00 0.00 41.38 3.53
5839 8975 5.483811 GTTCTGTTTTCCTTTTGGTTTGGA 58.516 37.500 0.00 0.00 41.38 3.53
5840 8976 4.634004 GGTTCTGTTTTCCTTTTGGTTTGG 59.366 41.667 0.00 0.00 41.38 3.28
5841 8977 5.121611 GTGGTTCTGTTTTCCTTTTGGTTTG 59.878 40.000 0.00 0.00 41.38 2.93
5842 8978 5.221742 TGTGGTTCTGTTTTCCTTTTGGTTT 60.222 36.000 0.00 0.00 41.38 3.27
5843 8979 4.284746 TGTGGTTCTGTTTTCCTTTTGGTT 59.715 37.500 0.00 0.00 41.38 3.67
5844 8980 3.835395 TGTGGTTCTGTTTTCCTTTTGGT 59.165 39.130 0.00 0.00 41.38 3.67
5845 8981 4.180817 GTGTGGTTCTGTTTTCCTTTTGG 58.819 43.478 0.00 0.00 42.21 3.28
5846 8982 4.081697 AGGTGTGGTTCTGTTTTCCTTTTG 60.082 41.667 0.00 0.00 0.00 2.44
5847 8983 4.093743 AGGTGTGGTTCTGTTTTCCTTTT 58.906 39.130 0.00 0.00 0.00 2.27
5848 8984 3.699538 GAGGTGTGGTTCTGTTTTCCTTT 59.300 43.478 0.00 0.00 0.00 3.11
5849 8985 3.053619 AGAGGTGTGGTTCTGTTTTCCTT 60.054 43.478 0.00 0.00 0.00 3.36
5850 8986 2.509964 AGAGGTGTGGTTCTGTTTTCCT 59.490 45.455 0.00 0.00 0.00 3.36
5851 8987 2.879026 GAGAGGTGTGGTTCTGTTTTCC 59.121 50.000 0.00 0.00 0.00 3.13
5852 8988 2.879026 GGAGAGGTGTGGTTCTGTTTTC 59.121 50.000 0.00 0.00 0.00 2.29
5853 8989 2.745152 CGGAGAGGTGTGGTTCTGTTTT 60.745 50.000 0.00 0.00 0.00 2.43
5854 8990 1.202651 CGGAGAGGTGTGGTTCTGTTT 60.203 52.381 0.00 0.00 0.00 2.83
5855 8991 0.393077 CGGAGAGGTGTGGTTCTGTT 59.607 55.000 0.00 0.00 0.00 3.16
5856 8992 0.469331 TCGGAGAGGTGTGGTTCTGT 60.469 55.000 0.00 0.00 0.00 3.41
5857 8993 0.679505 TTCGGAGAGGTGTGGTTCTG 59.320 55.000 0.00 0.00 38.43 3.02
5858 8994 0.680061 GTTCGGAGAGGTGTGGTTCT 59.320 55.000 0.00 0.00 38.43 3.01
5859 8995 0.320508 GGTTCGGAGAGGTGTGGTTC 60.321 60.000 0.00 0.00 38.43 3.62
5860 8996 1.052124 TGGTTCGGAGAGGTGTGGTT 61.052 55.000 0.00 0.00 38.43 3.67
5861 8997 1.052124 TTGGTTCGGAGAGGTGTGGT 61.052 55.000 0.00 0.00 38.43 4.16
5862 8998 0.320771 CTTGGTTCGGAGAGGTGTGG 60.321 60.000 0.00 0.00 38.43 4.17
5863 8999 0.951040 GCTTGGTTCGGAGAGGTGTG 60.951 60.000 0.00 0.00 38.43 3.82
5864 9000 1.371558 GCTTGGTTCGGAGAGGTGT 59.628 57.895 0.00 0.00 38.43 4.16
5865 9001 0.671781 CTGCTTGGTTCGGAGAGGTG 60.672 60.000 0.00 0.00 38.43 4.00
5866 9002 0.832135 TCTGCTTGGTTCGGAGAGGT 60.832 55.000 0.00 0.00 38.43 3.85
5867 9003 0.108424 CTCTGCTTGGTTCGGAGAGG 60.108 60.000 0.00 0.00 41.53 3.69
5868 9004 3.432517 CTCTGCTTGGTTCGGAGAG 57.567 57.895 0.00 0.00 39.91 3.20
5869 9005 1.819288 CTACTCTGCTTGGTTCGGAGA 59.181 52.381 5.90 0.00 38.84 3.71
5870 9006 1.546476 ACTACTCTGCTTGGTTCGGAG 59.454 52.381 0.00 0.00 41.51 4.63
5871 9007 1.629043 ACTACTCTGCTTGGTTCGGA 58.371 50.000 0.00 0.00 0.00 4.55
5872 9008 2.457366 AACTACTCTGCTTGGTTCGG 57.543 50.000 0.00 0.00 0.00 4.30
5873 9009 4.813296 AAAAACTACTCTGCTTGGTTCG 57.187 40.909 0.00 0.00 0.00 3.95
5900 9036 7.396540 AGAAGCTCAAGTTTCTCAAAAGAAA 57.603 32.000 3.56 0.00 46.72 2.52
5901 9037 7.396540 AAGAAGCTCAAGTTTCTCAAAAGAA 57.603 32.000 9.20 0.00 43.31 2.52
5902 9038 7.396540 AAAGAAGCTCAAGTTTCTCAAAAGA 57.603 32.000 9.20 0.00 43.31 2.52
5903 9039 7.374491 CGTAAAGAAGCTCAAGTTTCTCAAAAG 59.626 37.037 9.20 0.00 43.31 2.27
5904 9040 7.148306 ACGTAAAGAAGCTCAAGTTTCTCAAAA 60.148 33.333 9.20 0.00 43.31 2.44
5905 9041 6.315393 ACGTAAAGAAGCTCAAGTTTCTCAAA 59.685 34.615 9.20 0.00 43.31 2.69
5906 9042 5.815740 ACGTAAAGAAGCTCAAGTTTCTCAA 59.184 36.000 9.20 0.00 43.31 3.02
5907 9043 5.357257 ACGTAAAGAAGCTCAAGTTTCTCA 58.643 37.500 9.20 0.00 43.31 3.27
5908 9044 5.908916 ACGTAAAGAAGCTCAAGTTTCTC 57.091 39.130 9.20 0.00 43.31 2.87
5909 9045 6.679327 AAACGTAAAGAAGCTCAAGTTTCT 57.321 33.333 3.56 3.56 45.48 2.52
5910 9046 7.736031 AAAAACGTAAAGAAGCTCAAGTTTC 57.264 32.000 0.00 0.00 35.81 2.78
5931 9067 8.585471 AAGCTCATGATTCTCATAAGGAAAAA 57.415 30.769 0.00 0.00 34.28 1.94
5932 9068 8.585471 AAAGCTCATGATTCTCATAAGGAAAA 57.415 30.769 0.00 0.00 34.28 2.29
5933 9069 8.585471 AAAAGCTCATGATTCTCATAAGGAAA 57.415 30.769 0.00 0.00 34.28 3.13
5934 9070 8.585471 AAAAAGCTCATGATTCTCATAAGGAA 57.415 30.769 0.00 0.00 34.28 3.36
6000 9136 9.849166 ACATTTGTCTCGAAAGAAACTTTAAAA 57.151 25.926 0.00 0.00 41.32 1.52
6001 9137 9.849166 AACATTTGTCTCGAAAGAAACTTTAAA 57.151 25.926 0.00 0.00 41.32 1.52
6002 9138 9.849166 AAACATTTGTCTCGAAAGAAACTTTAA 57.151 25.926 0.00 0.00 41.32 1.52
6003 9139 9.849166 AAAACATTTGTCTCGAAAGAAACTTTA 57.151 25.926 0.00 0.00 41.32 1.85
6004 9140 8.757164 AAAACATTTGTCTCGAAAGAAACTTT 57.243 26.923 0.00 0.00 41.32 2.66
6005 9141 8.757164 AAAAACATTTGTCTCGAAAGAAACTT 57.243 26.923 0.00 0.00 41.32 2.66
6056 9192 9.095700 ACATAAATAAAGAAGCACCCCTAAAAA 57.904 29.630 0.00 0.00 0.00 1.94
6057 9193 8.658840 ACATAAATAAAGAAGCACCCCTAAAA 57.341 30.769 0.00 0.00 0.00 1.52
6058 9194 8.658840 AACATAAATAAAGAAGCACCCCTAAA 57.341 30.769 0.00 0.00 0.00 1.85
6059 9195 8.658840 AAACATAAATAAAGAAGCACCCCTAA 57.341 30.769 0.00 0.00 0.00 2.69
6060 9196 8.658840 AAAACATAAATAAAGAAGCACCCCTA 57.341 30.769 0.00 0.00 0.00 3.53
6061 9197 7.553504 AAAACATAAATAAAGAAGCACCCCT 57.446 32.000 0.00 0.00 0.00 4.79
6085 9221 2.482721 GCCTAGCTGTTGTCGCTAAAAA 59.517 45.455 0.00 0.00 39.29 1.94
6086 9222 2.073816 GCCTAGCTGTTGTCGCTAAAA 58.926 47.619 0.00 0.00 39.29 1.52
6087 9223 1.275291 AGCCTAGCTGTTGTCGCTAAA 59.725 47.619 0.00 0.00 39.29 1.85
6088 9224 0.895530 AGCCTAGCTGTTGTCGCTAA 59.104 50.000 0.00 0.00 39.29 3.09
6089 9225 0.895530 AAGCCTAGCTGTTGTCGCTA 59.104 50.000 0.00 0.00 39.62 4.26
6090 9226 0.035458 AAAGCCTAGCTGTTGTCGCT 59.965 50.000 0.00 0.00 39.62 4.93
6091 9227 1.722011 TAAAGCCTAGCTGTTGTCGC 58.278 50.000 0.00 0.00 39.62 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.