Multiple sequence alignment - TraesCS2D01G169500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G169500 chr2D 100.000 3320 0 0 1 3320 113479501 113482820 0.000000e+00 6131.0
1 TraesCS2D01G169500 chr2D 92.822 1421 78 4 923 2334 113091278 113092683 0.000000e+00 2037.0
2 TraesCS2D01G169500 chr2D 91.556 675 52 4 2649 3319 545782659 545781986 0.000000e+00 926.0
3 TraesCS2D01G169500 chr2D 88.889 666 55 6 2669 3319 472026871 472026210 0.000000e+00 802.0
4 TraesCS2D01G169500 chr2B 95.795 1736 50 11 785 2510 163977039 163978761 0.000000e+00 2780.0
5 TraesCS2D01G169500 chr2B 93.300 1418 76 4 921 2334 163741709 163743111 0.000000e+00 2074.0
6 TraesCS2D01G169500 chr2B 96.835 316 7 1 478 790 163976664 163976979 2.930000e-145 525.0
7 TraesCS2D01G169500 chr2B 94.928 138 6 1 355 492 163976513 163976649 7.210000e-52 215.0
8 TraesCS2D01G169500 chr2B 89.091 165 14 3 627 790 163736754 163736915 5.620000e-48 202.0
9 TraesCS2D01G169500 chr2B 88.722 133 12 3 2503 2634 164069523 164069653 3.430000e-35 159.0
10 TraesCS2D01G169500 chr2B 90.323 62 3 2 532 593 163736698 163736756 9.870000e-11 78.7
11 TraesCS2D01G169500 chr2B 91.111 45 1 2 588 629 545370138 545370094 1.290000e-04 58.4
12 TraesCS2D01G169500 chr2A 93.013 1746 69 21 627 2341 115094377 115096100 0.000000e+00 2499.0
13 TraesCS2D01G169500 chr2A 92.762 1050 63 7 1334 2383 114498414 114497378 0.000000e+00 1506.0
14 TraesCS2D01G169500 chr2A 91.803 427 24 6 923 1343 114499323 114498902 4.770000e-163 584.0
15 TraesCS2D01G169500 chr2A 89.270 233 20 4 2338 2569 115096206 115096434 1.510000e-73 287.0
16 TraesCS2D01G169500 chr2A 80.272 294 23 19 634 896 114503693 114503404 4.370000e-44 189.0
17 TraesCS2D01G169500 chr2A 96.923 65 0 2 530 593 115094316 115094379 1.260000e-19 108.0
18 TraesCS2D01G169500 chr2A 92.308 52 1 1 588 636 761433060 761433009 1.650000e-08 71.3
19 TraesCS2D01G169500 chr3A 86.300 1365 140 21 967 2325 100847760 100849083 0.000000e+00 1441.0
20 TraesCS2D01G169500 chr3A 92.878 674 45 3 2647 3319 629049902 629050573 0.000000e+00 976.0
21 TraesCS2D01G169500 chr3A 92.000 675 51 3 2647 3320 628702274 628701602 0.000000e+00 944.0
22 TraesCS2D01G169500 chr3A 83.106 367 49 9 1 355 731785344 731785709 4.130000e-84 322.0
23 TraesCS2D01G169500 chr3B 88.838 1093 119 3 1233 2325 132910201 132911290 0.000000e+00 1339.0
24 TraesCS2D01G169500 chr3B 86.577 1043 131 4 1289 2325 132052916 132051877 0.000000e+00 1142.0
25 TraesCS2D01G169500 chr3B 86.892 1007 127 5 1191 2196 132956159 132957161 0.000000e+00 1123.0
26 TraesCS2D01G169500 chr3B 89.099 688 56 5 2646 3318 829296628 829297311 0.000000e+00 837.0
27 TraesCS2D01G169500 chrUn 83.333 1104 156 18 1219 2320 34009833 34010910 0.000000e+00 994.0
28 TraesCS2D01G169500 chrUn 83.243 1104 157 18 1219 2320 34465190 34464113 0.000000e+00 989.0
29 TraesCS2D01G169500 chr3D 80.539 1336 193 35 1000 2330 1196972 1195699 0.000000e+00 965.0
30 TraesCS2D01G169500 chr3D 90.764 563 39 4 2768 3319 608182377 608182937 0.000000e+00 739.0
31 TraesCS2D01G169500 chr3D 94.130 460 26 1 2649 3107 548717772 548718231 0.000000e+00 699.0
32 TraesCS2D01G169500 chr3D 93.182 44 0 1 589 629 418436720 418436677 9.950000e-06 62.1
33 TraesCS2D01G169500 chr3D 90.000 50 2 1 588 634 605030758 605030807 9.950000e-06 62.1
34 TraesCS2D01G169500 chr7D 91.071 672 39 8 2649 3319 557947369 557948020 0.000000e+00 889.0
35 TraesCS2D01G169500 chr7D 89.016 701 47 4 2649 3319 116128848 116128148 0.000000e+00 841.0
36 TraesCS2D01G169500 chr7D 88.660 485 51 4 2647 3129 439708171 439708653 3.690000e-164 588.0
37 TraesCS2D01G169500 chr7D 95.486 288 12 1 3029 3316 614290905 614291191 3.020000e-125 459.0
38 TraesCS2D01G169500 chr7D 92.308 52 1 1 588 636 566094455 566094404 1.650000e-08 71.3
39 TraesCS2D01G169500 chr6A 89.926 675 57 7 2649 3319 171451371 171450704 0.000000e+00 859.0
40 TraesCS2D01G169500 chr6A 85.434 357 41 7 4 351 317148439 317148085 8.760000e-96 361.0
41 TraesCS2D01G169500 chr6A 82.888 374 42 14 1 358 570519360 570518993 1.920000e-82 316.0
42 TraesCS2D01G169500 chr6D 86.515 482 60 5 2647 3125 427314847 427315326 2.930000e-145 525.0
43 TraesCS2D01G169500 chr1D 86.345 476 61 4 2652 3125 382776429 382776902 1.770000e-142 516.0
44 TraesCS2D01G169500 chr7B 93.822 259 16 0 3059 3317 104028610 104028868 1.120000e-104 390.0
45 TraesCS2D01G169500 chr5A 85.714 364 42 7 1 355 311874126 311873764 3.130000e-100 375.0
46 TraesCS2D01G169500 chr5A 84.000 375 41 12 1 357 524194411 524194784 3.170000e-90 342.0
47 TraesCS2D01G169500 chr6B 84.341 364 42 11 5 359 72434804 72434447 3.170000e-90 342.0
48 TraesCS2D01G169500 chr6B 88.462 52 3 1 588 636 2799895 2799844 3.580000e-05 60.2
49 TraesCS2D01G169500 chr1A 83.967 368 37 15 1 355 430240873 430240515 1.910000e-87 333.0
50 TraesCS2D01G169500 chr5D 83.155 374 45 12 1 357 393453717 393453345 3.190000e-85 326.0
51 TraesCS2D01G169500 chr5D 83.696 368 37 10 1 357 418944197 418944552 3.190000e-85 326.0
52 TraesCS2D01G169500 chr4D 90.000 50 2 2 588 634 110233707 110233658 9.950000e-06 62.1
53 TraesCS2D01G169500 chr4B 91.304 46 1 1 587 629 654062627 654062582 3.580000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G169500 chr2D 113479501 113482820 3319 False 6131.000000 6131 100.000000 1 3320 1 chr2D.!!$F2 3319
1 TraesCS2D01G169500 chr2D 113091278 113092683 1405 False 2037.000000 2037 92.822000 923 2334 1 chr2D.!!$F1 1411
2 TraesCS2D01G169500 chr2D 545781986 545782659 673 True 926.000000 926 91.556000 2649 3319 1 chr2D.!!$R2 670
3 TraesCS2D01G169500 chr2D 472026210 472026871 661 True 802.000000 802 88.889000 2669 3319 1 chr2D.!!$R1 650
4 TraesCS2D01G169500 chr2B 163741709 163743111 1402 False 2074.000000 2074 93.300000 921 2334 1 chr2B.!!$F1 1413
5 TraesCS2D01G169500 chr2B 163976513 163978761 2248 False 1173.333333 2780 95.852667 355 2510 3 chr2B.!!$F4 2155
6 TraesCS2D01G169500 chr2A 114497378 114499323 1945 True 1045.000000 1506 92.282500 923 2383 2 chr2A.!!$R3 1460
7 TraesCS2D01G169500 chr2A 115094316 115096434 2118 False 964.666667 2499 93.068667 530 2569 3 chr2A.!!$F1 2039
8 TraesCS2D01G169500 chr3A 100847760 100849083 1323 False 1441.000000 1441 86.300000 967 2325 1 chr3A.!!$F1 1358
9 TraesCS2D01G169500 chr3A 629049902 629050573 671 False 976.000000 976 92.878000 2647 3319 1 chr3A.!!$F2 672
10 TraesCS2D01G169500 chr3A 628701602 628702274 672 True 944.000000 944 92.000000 2647 3320 1 chr3A.!!$R1 673
11 TraesCS2D01G169500 chr3B 132910201 132911290 1089 False 1339.000000 1339 88.838000 1233 2325 1 chr3B.!!$F1 1092
12 TraesCS2D01G169500 chr3B 132051877 132052916 1039 True 1142.000000 1142 86.577000 1289 2325 1 chr3B.!!$R1 1036
13 TraesCS2D01G169500 chr3B 132956159 132957161 1002 False 1123.000000 1123 86.892000 1191 2196 1 chr3B.!!$F2 1005
14 TraesCS2D01G169500 chr3B 829296628 829297311 683 False 837.000000 837 89.099000 2646 3318 1 chr3B.!!$F3 672
15 TraesCS2D01G169500 chrUn 34009833 34010910 1077 False 994.000000 994 83.333000 1219 2320 1 chrUn.!!$F1 1101
16 TraesCS2D01G169500 chrUn 34464113 34465190 1077 True 989.000000 989 83.243000 1219 2320 1 chrUn.!!$R1 1101
17 TraesCS2D01G169500 chr3D 1195699 1196972 1273 True 965.000000 965 80.539000 1000 2330 1 chr3D.!!$R1 1330
18 TraesCS2D01G169500 chr3D 608182377 608182937 560 False 739.000000 739 90.764000 2768 3319 1 chr3D.!!$F3 551
19 TraesCS2D01G169500 chr7D 557947369 557948020 651 False 889.000000 889 91.071000 2649 3319 1 chr7D.!!$F2 670
20 TraesCS2D01G169500 chr7D 116128148 116128848 700 True 841.000000 841 89.016000 2649 3319 1 chr7D.!!$R1 670
21 TraesCS2D01G169500 chr6A 171450704 171451371 667 True 859.000000 859 89.926000 2649 3319 1 chr6A.!!$R1 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
269 270 0.035881 CAGAAGAAGCACCCAGAGCA 59.964 55.0 0.00 0.0 0.0 4.26 F
270 271 0.036022 AGAAGAAGCACCCAGAGCAC 59.964 55.0 0.00 0.0 0.0 4.40 F
333 334 0.036388 ATTGCGAGGCTTCCGAAGAA 60.036 50.0 12.54 0.0 0.0 2.52 F
334 335 0.250124 TTGCGAGGCTTCCGAAGAAA 60.250 50.0 12.54 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1085 1229 1.375908 GAGTCAATGTGGGCGAGCA 60.376 57.895 0.0 0.0 0.00 4.26 R
1090 1234 1.541588 GAGTTTGGAGTCAATGTGGGC 59.458 52.381 0.0 0.0 32.28 5.36 R
2310 2960 1.275856 AGCTTCAGACCTCAGAGCTTG 59.724 52.381 0.0 0.0 0.00 4.01 R
2335 2985 3.833650 TGGATACCCACAAGAAAGTACGA 59.166 43.478 0.0 0.0 37.58 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.589798 AAAACCGTGACTCTCGTGAA 57.410 45.000 0.24 0.00 0.00 3.18
20 21 2.589798 AAACCGTGACTCTCGTGAAA 57.410 45.000 0.24 0.00 0.00 2.69
21 22 2.135664 AACCGTGACTCTCGTGAAAG 57.864 50.000 0.24 0.00 0.00 2.62
22 23 0.318784 ACCGTGACTCTCGTGAAAGC 60.319 55.000 0.24 0.00 0.00 3.51
23 24 0.318699 CCGTGACTCTCGTGAAAGCA 60.319 55.000 0.24 0.00 0.00 3.91
24 25 1.487482 CGTGACTCTCGTGAAAGCAA 58.513 50.000 0.00 0.00 0.00 3.91
25 26 1.858458 CGTGACTCTCGTGAAAGCAAA 59.142 47.619 0.00 0.00 0.00 3.68
26 27 2.284150 CGTGACTCTCGTGAAAGCAAAA 59.716 45.455 0.00 0.00 0.00 2.44
27 28 3.242284 CGTGACTCTCGTGAAAGCAAAAA 60.242 43.478 0.00 0.00 0.00 1.94
66 67 2.861006 GTTTTCGAGAGGCACGGC 59.139 61.111 0.00 0.00 0.00 5.68
97 98 2.018717 CGAAAGCAAAACCGTGACTC 57.981 50.000 0.00 0.00 0.00 3.36
98 99 1.597663 CGAAAGCAAAACCGTGACTCT 59.402 47.619 0.00 0.00 0.00 3.24
99 100 2.348591 CGAAAGCAAAACCGTGACTCTC 60.349 50.000 0.00 0.00 0.00 3.20
100 101 1.217882 AAGCAAAACCGTGACTCTCG 58.782 50.000 0.00 0.00 0.00 4.04
101 102 1.204312 GCAAAACCGTGACTCTCGC 59.796 57.895 0.00 0.00 0.00 5.03
109 110 3.491581 GTGACTCTCGCGAAGGAAA 57.508 52.632 11.33 0.00 0.00 3.13
110 111 1.779569 GTGACTCTCGCGAAGGAAAA 58.220 50.000 11.33 0.00 0.00 2.29
111 112 2.132762 GTGACTCTCGCGAAGGAAAAA 58.867 47.619 11.33 0.00 0.00 1.94
171 172 6.737254 TTATTGAAAAGCTAAGGAAGACCG 57.263 37.500 0.00 0.00 41.83 4.79
172 173 3.053831 TGAAAAGCTAAGGAAGACCGG 57.946 47.619 0.00 0.00 41.83 5.28
173 174 2.370849 TGAAAAGCTAAGGAAGACCGGT 59.629 45.455 6.92 6.92 41.83 5.28
174 175 2.474410 AAAGCTAAGGAAGACCGGTG 57.526 50.000 14.63 0.00 41.83 4.94
175 176 0.613777 AAGCTAAGGAAGACCGGTGG 59.386 55.000 14.63 0.00 41.83 4.61
176 177 0.252103 AGCTAAGGAAGACCGGTGGA 60.252 55.000 14.63 0.00 41.83 4.02
177 178 0.611714 GCTAAGGAAGACCGGTGGAA 59.388 55.000 14.63 0.00 41.83 3.53
178 179 1.002773 GCTAAGGAAGACCGGTGGAAA 59.997 52.381 14.63 0.00 41.83 3.13
179 180 2.551504 GCTAAGGAAGACCGGTGGAAAA 60.552 50.000 14.63 0.00 41.83 2.29
180 181 1.977056 AAGGAAGACCGGTGGAAAAC 58.023 50.000 14.63 0.00 41.83 2.43
181 182 0.109913 AGGAAGACCGGTGGAAAACC 59.890 55.000 14.63 6.78 46.60 3.27
195 196 6.410243 GTGGAAAACCAAAATGTCGAAAAA 57.590 33.333 0.00 0.00 0.00 1.94
230 231 2.325166 GTTGAAAACGCGTGCGGA 59.675 55.556 14.98 0.00 44.69 5.54
231 232 1.297745 GTTGAAAACGCGTGCGGAA 60.298 52.632 14.98 0.50 44.69 4.30
232 233 0.862283 GTTGAAAACGCGTGCGGAAA 60.862 50.000 14.98 0.97 44.69 3.13
233 234 0.179171 TTGAAAACGCGTGCGGAAAA 60.179 45.000 14.98 0.00 44.69 2.29
234 235 0.179171 TGAAAACGCGTGCGGAAAAA 60.179 45.000 14.98 0.00 44.69 1.94
235 236 1.125270 GAAAACGCGTGCGGAAAAAT 58.875 45.000 14.98 0.00 44.69 1.82
236 237 2.286831 TGAAAACGCGTGCGGAAAAATA 60.287 40.909 14.98 0.00 44.69 1.40
237 238 2.402640 AAACGCGTGCGGAAAAATAA 57.597 40.000 14.98 0.00 44.69 1.40
238 239 2.402640 AACGCGTGCGGAAAAATAAA 57.597 40.000 14.98 0.00 44.69 1.40
239 240 2.402640 ACGCGTGCGGAAAAATAAAA 57.597 40.000 12.93 0.00 44.69 1.52
240 241 2.728922 ACGCGTGCGGAAAAATAAAAA 58.271 38.095 12.93 0.00 44.69 1.94
263 264 5.921962 AATAAAATCCAGAAGAAGCACCC 57.078 39.130 0.00 0.00 0.00 4.61
264 265 2.978156 AAATCCAGAAGAAGCACCCA 57.022 45.000 0.00 0.00 0.00 4.51
265 266 2.503895 AATCCAGAAGAAGCACCCAG 57.496 50.000 0.00 0.00 0.00 4.45
266 267 1.661463 ATCCAGAAGAAGCACCCAGA 58.339 50.000 0.00 0.00 0.00 3.86
267 268 0.979665 TCCAGAAGAAGCACCCAGAG 59.020 55.000 0.00 0.00 0.00 3.35
268 269 0.676151 CCAGAAGAAGCACCCAGAGC 60.676 60.000 0.00 0.00 0.00 4.09
269 270 0.035881 CAGAAGAAGCACCCAGAGCA 59.964 55.000 0.00 0.00 0.00 4.26
270 271 0.036022 AGAAGAAGCACCCAGAGCAC 59.964 55.000 0.00 0.00 0.00 4.40
271 272 1.294659 GAAGAAGCACCCAGAGCACG 61.295 60.000 0.00 0.00 0.00 5.34
272 273 1.758440 AAGAAGCACCCAGAGCACGA 61.758 55.000 0.00 0.00 0.00 4.35
273 274 2.029844 GAAGCACCCAGAGCACGAC 61.030 63.158 0.00 0.00 0.00 4.34
274 275 2.715532 GAAGCACCCAGAGCACGACA 62.716 60.000 0.00 0.00 0.00 4.35
275 276 2.996168 AAGCACCCAGAGCACGACAC 62.996 60.000 0.00 0.00 0.00 3.67
276 277 2.734723 CACCCAGAGCACGACACG 60.735 66.667 0.00 0.00 0.00 4.49
277 278 3.224324 ACCCAGAGCACGACACGT 61.224 61.111 0.00 0.00 42.36 4.49
288 289 2.742372 GACACGTGGCGAATGGCT 60.742 61.111 21.57 0.00 42.94 4.75
289 290 3.027170 GACACGTGGCGAATGGCTG 62.027 63.158 21.57 0.00 42.94 4.85
290 291 2.741985 CACGTGGCGAATGGCTGA 60.742 61.111 7.95 0.00 42.94 4.26
291 292 2.434884 ACGTGGCGAATGGCTGAG 60.435 61.111 0.00 0.00 42.94 3.35
292 293 2.125552 CGTGGCGAATGGCTGAGA 60.126 61.111 0.00 0.00 42.94 3.27
293 294 2.169789 CGTGGCGAATGGCTGAGAG 61.170 63.158 0.00 0.00 42.94 3.20
294 295 2.124983 TGGCGAATGGCTGAGAGC 60.125 61.111 0.00 0.00 42.94 4.09
295 296 2.124983 GGCGAATGGCTGAGAGCA 60.125 61.111 0.00 0.00 44.75 4.26
296 297 2.467826 GGCGAATGGCTGAGAGCAC 61.468 63.158 0.00 0.00 44.75 4.40
297 298 2.806856 GCGAATGGCTGAGAGCACG 61.807 63.158 0.00 0.00 44.75 5.34
298 299 2.806856 CGAATGGCTGAGAGCACGC 61.807 63.158 0.00 0.00 44.75 5.34
299 300 2.437359 AATGGCTGAGAGCACGCC 60.437 61.111 0.00 0.00 44.75 5.68
302 303 3.123620 GGCTGAGAGCACGCCAAG 61.124 66.667 0.00 0.00 44.75 3.61
303 304 2.358003 GCTGAGAGCACGCCAAGT 60.358 61.111 0.00 0.00 41.89 3.16
315 316 4.230603 CCAAGTGGCGCTGATCAT 57.769 55.556 7.64 0.00 0.00 2.45
316 317 2.485677 CCAAGTGGCGCTGATCATT 58.514 52.632 7.64 0.00 0.00 2.57
317 318 0.099968 CCAAGTGGCGCTGATCATTG 59.900 55.000 7.64 4.46 0.00 2.82
318 319 0.524816 CAAGTGGCGCTGATCATTGC 60.525 55.000 7.64 10.08 0.00 3.56
324 325 4.137879 GCTGATCATTGCGAGGCT 57.862 55.556 0.00 0.00 0.00 4.58
325 326 2.401967 GCTGATCATTGCGAGGCTT 58.598 52.632 0.00 0.00 0.00 4.35
326 327 0.307146 GCTGATCATTGCGAGGCTTC 59.693 55.000 0.00 0.00 0.00 3.86
327 328 0.942962 CTGATCATTGCGAGGCTTCC 59.057 55.000 0.00 0.00 0.00 3.46
328 329 0.811219 TGATCATTGCGAGGCTTCCG 60.811 55.000 0.00 0.00 0.00 4.30
329 330 0.530650 GATCATTGCGAGGCTTCCGA 60.531 55.000 0.00 0.00 0.00 4.55
330 331 0.107703 ATCATTGCGAGGCTTCCGAA 60.108 50.000 0.00 0.00 0.00 4.30
331 332 0.740868 TCATTGCGAGGCTTCCGAAG 60.741 55.000 3.56 3.56 0.00 3.79
332 333 0.740868 CATTGCGAGGCTTCCGAAGA 60.741 55.000 12.54 0.00 0.00 2.87
333 334 0.036388 ATTGCGAGGCTTCCGAAGAA 60.036 50.000 12.54 0.00 0.00 2.52
334 335 0.250124 TTGCGAGGCTTCCGAAGAAA 60.250 50.000 12.54 0.00 0.00 2.52
335 336 0.949105 TGCGAGGCTTCCGAAGAAAC 60.949 55.000 12.54 1.50 0.00 2.78
336 337 1.956620 GCGAGGCTTCCGAAGAAACG 61.957 60.000 12.54 12.91 0.00 3.60
337 338 1.788481 GAGGCTTCCGAAGAAACGC 59.212 57.895 12.54 0.00 0.00 4.84
338 339 0.670854 GAGGCTTCCGAAGAAACGCT 60.671 55.000 12.54 0.00 0.00 5.07
339 340 0.670854 AGGCTTCCGAAGAAACGCTC 60.671 55.000 12.54 0.00 0.00 5.03
340 341 0.949105 GGCTTCCGAAGAAACGCTCA 60.949 55.000 12.54 0.00 0.00 4.26
341 342 1.079503 GCTTCCGAAGAAACGCTCAT 58.920 50.000 12.54 0.00 0.00 2.90
342 343 1.464997 GCTTCCGAAGAAACGCTCATT 59.535 47.619 12.54 0.00 0.00 2.57
343 344 2.671396 GCTTCCGAAGAAACGCTCATTA 59.329 45.455 12.54 0.00 0.00 1.90
344 345 3.124636 GCTTCCGAAGAAACGCTCATTAA 59.875 43.478 12.54 0.00 0.00 1.40
345 346 4.638963 CTTCCGAAGAAACGCTCATTAAC 58.361 43.478 1.51 0.00 0.00 2.01
346 347 3.921677 TCCGAAGAAACGCTCATTAACT 58.078 40.909 0.00 0.00 0.00 2.24
347 348 5.063180 TCCGAAGAAACGCTCATTAACTA 57.937 39.130 0.00 0.00 0.00 2.24
348 349 5.100259 TCCGAAGAAACGCTCATTAACTAG 58.900 41.667 0.00 0.00 0.00 2.57
349 350 4.863131 CCGAAGAAACGCTCATTAACTAGT 59.137 41.667 0.00 0.00 0.00 2.57
350 351 5.347907 CCGAAGAAACGCTCATTAACTAGTT 59.652 40.000 13.68 13.68 0.00 2.24
351 352 6.234213 CGAAGAAACGCTCATTAACTAGTTG 58.766 40.000 18.56 2.32 0.00 3.16
352 353 5.532025 AGAAACGCTCATTAACTAGTTGC 57.468 39.130 18.56 11.18 0.00 4.17
353 354 5.238583 AGAAACGCTCATTAACTAGTTGCT 58.761 37.500 18.56 2.19 0.00 3.91
356 357 4.425520 ACGCTCATTAACTAGTTGCTCTC 58.574 43.478 18.56 2.53 0.00 3.20
367 368 5.701855 ACTAGTTGCTCTCGAGAAAGTTAC 58.298 41.667 17.36 10.07 32.08 2.50
413 414 1.367840 GAGCGAGAGTGTGTTGGGT 59.632 57.895 0.00 0.00 0.00 4.51
414 415 0.667792 GAGCGAGAGTGTGTTGGGTC 60.668 60.000 0.00 0.00 0.00 4.46
475 476 6.644248 AAACCTGGTAAAGTACATGTTTCC 57.356 37.500 2.30 0.00 0.00 3.13
478 479 4.700213 CCTGGTAAAGTACATGTTTCCCAG 59.300 45.833 2.30 8.48 37.33 4.45
507 537 7.362662 TGAATTGAGTACTTGTGCTTTCAATC 58.637 34.615 0.00 0.00 35.03 2.67
610 641 3.009143 AGCTACTCCCTCCGTTTCAAAAT 59.991 43.478 0.00 0.00 0.00 1.82
615 646 5.429130 ACTCCCTCCGTTTCAAAATAGATC 58.571 41.667 0.00 0.00 0.00 2.75
616 647 4.777463 TCCCTCCGTTTCAAAATAGATCC 58.223 43.478 0.00 0.00 0.00 3.36
617 648 4.226394 TCCCTCCGTTTCAAAATAGATCCA 59.774 41.667 0.00 0.00 0.00 3.41
618 649 4.947388 CCCTCCGTTTCAAAATAGATCCAA 59.053 41.667 0.00 0.00 0.00 3.53
620 651 5.648092 CCTCCGTTTCAAAATAGATCCAACT 59.352 40.000 0.00 0.00 0.00 3.16
621 652 6.151144 CCTCCGTTTCAAAATAGATCCAACTT 59.849 38.462 0.00 0.00 0.00 2.66
622 653 7.309194 CCTCCGTTTCAAAATAGATCCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
623 654 7.367285 TCCGTTTCAAAATAGATCCAACTTTG 58.633 34.615 0.00 0.00 0.00 2.77
1085 1229 2.920645 CGTCCGGCTATCGCTCCAT 61.921 63.158 0.00 0.00 37.59 3.41
1090 1234 1.735920 GGCTATCGCTCCATGCTCG 60.736 63.158 0.00 0.00 40.11 5.03
1122 1266 0.310854 CCAAACTCGGCTTCACCAAC 59.689 55.000 0.00 0.00 39.03 3.77
2277 2927 0.943673 TGCTGTTTGACATCACCGTG 59.056 50.000 0.00 0.00 0.00 4.94
2310 2960 1.823169 TTGTCCCCACCGACTGTAGC 61.823 60.000 0.00 0.00 33.70 3.58
2334 2984 2.232452 GCTCTGAGGTCTGAAGCTTACA 59.768 50.000 0.00 0.00 32.07 2.41
2335 2985 3.118811 GCTCTGAGGTCTGAAGCTTACAT 60.119 47.826 0.00 0.00 32.07 2.29
2353 3112 4.877378 ACATCGTACTTTCTTGTGGGTA 57.123 40.909 0.00 0.00 0.00 3.69
2369 3128 3.509575 GTGGGTATCCAAGCAATTGTTGA 59.490 43.478 17.13 4.15 46.04 3.18
2432 3191 0.240945 GTTCATTGCCCTGTTGTCGG 59.759 55.000 0.00 0.00 0.00 4.79
2433 3192 0.109532 TTCATTGCCCTGTTGTCGGA 59.890 50.000 0.00 0.00 0.00 4.55
2434 3193 0.321564 TCATTGCCCTGTTGTCGGAG 60.322 55.000 0.00 0.00 0.00 4.63
2518 3277 1.076485 GCATGGGGATCAGTGCCTT 60.076 57.895 0.00 0.00 35.87 4.35
2522 3281 2.308722 GGGGATCAGTGCCTTGGGA 61.309 63.158 0.00 0.00 35.87 4.37
2528 3287 4.021925 AGTGCCTTGGGAGCGGAC 62.022 66.667 0.00 0.00 0.00 4.79
2553 3312 7.401493 ACTCCATCCAGAGATTAGAAAGAGAAA 59.599 37.037 0.00 0.00 37.33 2.52
2554 3313 8.150827 TCCATCCAGAGATTAGAAAGAGAAAA 57.849 34.615 0.00 0.00 0.00 2.29
2569 3328 9.594478 AGAAAGAGAAAATCTAGCTAACTTAGC 57.406 33.333 12.25 12.25 44.59 3.09
2581 3340 5.898630 GCTAACTTAGCTAGTTCATGAGC 57.101 43.478 12.80 0.50 43.67 4.26
2582 3341 4.747605 GCTAACTTAGCTAGTTCATGAGCC 59.252 45.833 12.80 0.00 43.67 4.70
2583 3342 5.452636 GCTAACTTAGCTAGTTCATGAGCCT 60.453 44.000 12.80 4.20 43.67 4.58
2584 3343 6.239064 GCTAACTTAGCTAGTTCATGAGCCTA 60.239 42.308 12.80 5.14 43.67 3.93
2585 3344 5.523438 ACTTAGCTAGTTCATGAGCCTAC 57.477 43.478 5.87 0.00 39.65 3.18
2586 3345 5.205056 ACTTAGCTAGTTCATGAGCCTACT 58.795 41.667 5.87 4.51 39.65 2.57
2587 3346 5.659079 ACTTAGCTAGTTCATGAGCCTACTT 59.341 40.000 5.87 0.00 39.65 2.24
2588 3347 4.399004 AGCTAGTTCATGAGCCTACTTG 57.601 45.455 5.87 4.36 39.65 3.16
2589 3348 4.026744 AGCTAGTTCATGAGCCTACTTGA 58.973 43.478 5.87 0.00 39.65 3.02
2590 3349 4.653341 AGCTAGTTCATGAGCCTACTTGAT 59.347 41.667 5.87 0.00 39.65 2.57
2591 3350 5.130145 AGCTAGTTCATGAGCCTACTTGATT 59.870 40.000 5.87 0.00 39.65 2.57
2592 3351 6.325028 AGCTAGTTCATGAGCCTACTTGATTA 59.675 38.462 5.87 0.00 39.65 1.75
2593 3352 6.422400 GCTAGTTCATGAGCCTACTTGATTAC 59.578 42.308 5.87 0.00 32.25 1.89
2594 3353 6.552445 AGTTCATGAGCCTACTTGATTACT 57.448 37.500 5.87 0.00 0.00 2.24
2595 3354 6.578023 AGTTCATGAGCCTACTTGATTACTC 58.422 40.000 5.87 0.00 0.00 2.59
2596 3355 6.382570 AGTTCATGAGCCTACTTGATTACTCT 59.617 38.462 5.87 0.00 0.00 3.24
2597 3356 6.798427 TCATGAGCCTACTTGATTACTCTT 57.202 37.500 0.00 0.00 0.00 2.85
2598 3357 6.810911 TCATGAGCCTACTTGATTACTCTTC 58.189 40.000 0.00 0.00 0.00 2.87
2599 3358 5.599999 TGAGCCTACTTGATTACTCTTCC 57.400 43.478 0.00 0.00 0.00 3.46
2600 3359 5.273208 TGAGCCTACTTGATTACTCTTCCT 58.727 41.667 0.00 0.00 0.00 3.36
2601 3360 6.432581 TGAGCCTACTTGATTACTCTTCCTA 58.567 40.000 0.00 0.00 0.00 2.94
2602 3361 7.069986 TGAGCCTACTTGATTACTCTTCCTAT 58.930 38.462 0.00 0.00 0.00 2.57
2603 3362 7.565398 TGAGCCTACTTGATTACTCTTCCTATT 59.435 37.037 0.00 0.00 0.00 1.73
2604 3363 9.080097 GAGCCTACTTGATTACTCTTCCTATTA 57.920 37.037 0.00 0.00 0.00 0.98
2605 3364 8.862085 AGCCTACTTGATTACTCTTCCTATTAC 58.138 37.037 0.00 0.00 0.00 1.89
2606 3365 8.639761 GCCTACTTGATTACTCTTCCTATTACA 58.360 37.037 0.00 0.00 0.00 2.41
2610 3369 9.256228 ACTTGATTACTCTTCCTATTACAGTGA 57.744 33.333 0.00 0.00 0.00 3.41
2613 3372 9.421399 TGATTACTCTTCCTATTACAGTGATCA 57.579 33.333 0.00 0.00 37.61 2.92
2616 3375 6.565234 ACTCTTCCTATTACAGTGATCAACG 58.435 40.000 0.00 0.00 0.00 4.10
2617 3376 6.377429 ACTCTTCCTATTACAGTGATCAACGA 59.623 38.462 0.00 0.00 0.00 3.85
2618 3377 7.068839 ACTCTTCCTATTACAGTGATCAACGAT 59.931 37.037 0.00 0.00 0.00 3.73
2619 3378 7.203218 TCTTCCTATTACAGTGATCAACGATG 58.797 38.462 0.00 0.00 0.00 3.84
2620 3379 6.709018 TCCTATTACAGTGATCAACGATGA 57.291 37.500 0.00 0.00 40.57 2.92
2622 3381 8.404107 TCCTATTACAGTGATCAACGATGATA 57.596 34.615 8.29 0.00 46.30 2.15
2623 3382 9.025041 TCCTATTACAGTGATCAACGATGATAT 57.975 33.333 8.29 0.00 46.30 1.63
2624 3383 9.080915 CCTATTACAGTGATCAACGATGATATG 57.919 37.037 8.29 10.09 46.30 1.78
2625 3384 9.631452 CTATTACAGTGATCAACGATGATATGT 57.369 33.333 18.26 18.26 46.30 2.29
2626 3385 7.698836 TTACAGTGATCAACGATGATATGTG 57.301 36.000 21.03 15.10 46.30 3.21
2627 3386 5.664457 ACAGTGATCAACGATGATATGTGT 58.336 37.500 8.29 8.87 46.30 3.72
2628 3387 6.805713 ACAGTGATCAACGATGATATGTGTA 58.194 36.000 8.29 0.00 46.30 2.90
2629 3388 7.264947 ACAGTGATCAACGATGATATGTGTAA 58.735 34.615 8.29 0.00 46.30 2.41
2630 3389 7.763985 ACAGTGATCAACGATGATATGTGTAAA 59.236 33.333 8.29 0.00 46.30 2.01
2631 3390 8.603181 CAGTGATCAACGATGATATGTGTAAAA 58.397 33.333 8.29 0.00 46.30 1.52
2632 3391 9.330063 AGTGATCAACGATGATATGTGTAAAAT 57.670 29.630 8.29 0.00 46.30 1.82
2633 3392 9.586150 GTGATCAACGATGATATGTGTAAAATC 57.414 33.333 8.29 0.00 46.30 2.17
2634 3393 9.546428 TGATCAACGATGATATGTGTAAAATCT 57.454 29.630 8.29 0.00 46.30 2.40
2635 3394 9.803130 GATCAACGATGATATGTGTAAAATCTG 57.197 33.333 8.29 0.00 46.30 2.90
2636 3395 8.940768 TCAACGATGATATGTGTAAAATCTGA 57.059 30.769 0.00 0.00 0.00 3.27
2637 3396 9.377312 TCAACGATGATATGTGTAAAATCTGAA 57.623 29.630 0.00 0.00 0.00 3.02
2638 3397 9.642312 CAACGATGATATGTGTAAAATCTGAAG 57.358 33.333 0.00 0.00 0.00 3.02
2639 3398 9.599866 AACGATGATATGTGTAAAATCTGAAGA 57.400 29.630 0.00 0.00 0.00 2.87
2640 3399 9.035607 ACGATGATATGTGTAAAATCTGAAGAC 57.964 33.333 0.00 0.00 0.00 3.01
2641 3400 9.034544 CGATGATATGTGTAAAATCTGAAGACA 57.965 33.333 0.00 0.00 0.00 3.41
2644 3403 9.889128 TGATATGTGTAAAATCTGAAGACATGA 57.111 29.630 0.00 0.00 0.00 3.07
2675 3434 5.758296 GCATCTCCAATAGACGGTTCAAATA 59.242 40.000 0.00 0.00 36.93 1.40
2701 3460 6.964807 AAAATACCTAACTTTTGGACCGTT 57.035 33.333 0.00 0.00 0.00 4.44
2704 3463 3.888583 ACCTAACTTTTGGACCGTTTGA 58.111 40.909 0.00 0.00 0.00 2.69
2705 3464 4.271661 ACCTAACTTTTGGACCGTTTGAA 58.728 39.130 0.00 0.00 0.00 2.69
2735 3495 1.070786 GCTCCAACAGACGGTCCAA 59.929 57.895 4.14 0.00 0.00 3.53
2793 3557 2.747396 AAATACAACACCTCGCGGTA 57.253 45.000 6.13 0.00 43.24 4.02
2944 3710 1.606313 CCACCGCCCAAATCCTTGT 60.606 57.895 0.00 0.00 0.00 3.16
2947 3713 1.674322 CCGCCCAAATCCTTGTCGT 60.674 57.895 0.00 0.00 0.00 4.34
3065 3842 3.810896 GCAACCGCGGTGGGATTC 61.811 66.667 34.95 12.41 44.64 2.52
3066 3843 3.496131 CAACCGCGGTGGGATTCG 61.496 66.667 34.95 10.61 44.64 3.34
3067 3844 4.770874 AACCGCGGTGGGATTCGG 62.771 66.667 34.95 0.00 46.61 4.30
3258 4070 2.338984 GCTCCTCGTGGTGTTCGT 59.661 61.111 2.99 0.00 34.23 3.85
3262 4074 1.663702 CCTCGTGGTGTTCGTGTCC 60.664 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.285950 CGTGCCTCTCGAAAACGAAAAA 60.286 45.455 0.00 0.00 36.38 1.94
44 45 1.259507 CGTGCCTCTCGAAAACGAAAA 59.740 47.619 0.00 0.00 36.38 2.29
45 46 0.856641 CGTGCCTCTCGAAAACGAAA 59.143 50.000 0.00 0.00 36.38 3.46
46 47 0.942410 CCGTGCCTCTCGAAAACGAA 60.942 55.000 0.00 0.00 36.38 3.85
47 48 1.372499 CCGTGCCTCTCGAAAACGA 60.372 57.895 0.00 0.00 36.38 3.85
48 49 3.011760 GCCGTGCCTCTCGAAAACG 62.012 63.158 0.00 0.00 0.00 3.60
49 50 2.677979 GGCCGTGCCTCTCGAAAAC 61.678 63.158 7.58 0.00 46.69 2.43
50 51 2.358247 GGCCGTGCCTCTCGAAAA 60.358 61.111 7.58 0.00 46.69 2.29
65 66 4.430765 TTTCGCGAGAGTCCCGGC 62.431 66.667 9.59 0.00 43.69 6.13
66 67 2.202623 CTTTCGCGAGAGTCCCGG 60.203 66.667 17.92 0.00 43.69 5.73
67 68 2.881352 GCTTTCGCGAGAGTCCCG 60.881 66.667 25.34 3.62 43.69 5.14
68 69 0.949105 TTTGCTTTCGCGAGAGTCCC 60.949 55.000 25.34 11.41 43.69 4.46
69 70 0.865769 TTTTGCTTTCGCGAGAGTCC 59.134 50.000 25.34 12.07 43.69 3.85
70 71 1.398578 GGTTTTGCTTTCGCGAGAGTC 60.399 52.381 25.34 18.16 43.69 3.36
71 72 0.586802 GGTTTTGCTTTCGCGAGAGT 59.413 50.000 25.34 0.00 43.69 3.24
72 73 0.451135 CGGTTTTGCTTTCGCGAGAG 60.451 55.000 21.42 21.42 43.69 3.20
73 74 1.155424 ACGGTTTTGCTTTCGCGAGA 61.155 50.000 9.59 3.35 39.65 4.04
74 75 0.991770 CACGGTTTTGCTTTCGCGAG 60.992 55.000 9.59 0.00 39.65 5.03
75 76 1.010574 CACGGTTTTGCTTTCGCGA 60.011 52.632 3.71 3.71 39.65 5.87
76 77 1.010574 TCACGGTTTTGCTTTCGCG 60.011 52.632 0.00 0.00 39.65 5.87
77 78 0.028902 AGTCACGGTTTTGCTTTCGC 59.971 50.000 0.00 0.00 0.00 4.70
78 79 1.597663 AGAGTCACGGTTTTGCTTTCG 59.402 47.619 0.00 0.00 0.00 3.46
79 80 2.348591 CGAGAGTCACGGTTTTGCTTTC 60.349 50.000 1.62 0.00 0.00 2.62
80 81 1.597663 CGAGAGTCACGGTTTTGCTTT 59.402 47.619 1.62 0.00 0.00 3.51
81 82 1.217882 CGAGAGTCACGGTTTTGCTT 58.782 50.000 1.62 0.00 0.00 3.91
82 83 1.222115 GCGAGAGTCACGGTTTTGCT 61.222 55.000 11.95 0.00 0.00 3.91
83 84 1.204312 GCGAGAGTCACGGTTTTGC 59.796 57.895 11.95 0.00 0.00 3.68
84 85 0.937699 TCGCGAGAGTCACGGTTTTG 60.938 55.000 3.71 0.00 34.84 2.44
85 86 0.249155 TTCGCGAGAGTCACGGTTTT 60.249 50.000 9.59 0.00 43.69 2.43
86 87 0.663568 CTTCGCGAGAGTCACGGTTT 60.664 55.000 9.59 0.00 43.69 3.27
87 88 1.081376 CTTCGCGAGAGTCACGGTT 60.081 57.895 9.59 0.00 43.69 4.44
88 89 2.561885 CTTCGCGAGAGTCACGGT 59.438 61.111 9.59 0.00 43.69 4.83
89 90 2.196382 TTCCTTCGCGAGAGTCACGG 62.196 60.000 9.59 2.88 43.69 4.94
90 91 0.386858 TTTCCTTCGCGAGAGTCACG 60.387 55.000 9.59 5.53 43.69 4.35
91 92 1.779569 TTTTCCTTCGCGAGAGTCAC 58.220 50.000 9.59 0.00 43.69 3.67
92 93 2.519377 TTTTTCCTTCGCGAGAGTCA 57.481 45.000 9.59 0.00 43.69 3.41
145 146 8.079809 CGGTCTTCCTTAGCTTTTCAATAAAAA 58.920 33.333 0.00 0.00 34.26 1.94
146 147 7.308951 CCGGTCTTCCTTAGCTTTTCAATAAAA 60.309 37.037 0.00 0.00 33.58 1.52
147 148 6.150474 CCGGTCTTCCTTAGCTTTTCAATAAA 59.850 38.462 0.00 0.00 0.00 1.40
148 149 5.646360 CCGGTCTTCCTTAGCTTTTCAATAA 59.354 40.000 0.00 0.00 0.00 1.40
149 150 5.183228 CCGGTCTTCCTTAGCTTTTCAATA 58.817 41.667 0.00 0.00 0.00 1.90
150 151 4.010349 CCGGTCTTCCTTAGCTTTTCAAT 58.990 43.478 0.00 0.00 0.00 2.57
151 152 3.181448 ACCGGTCTTCCTTAGCTTTTCAA 60.181 43.478 0.00 0.00 0.00 2.69
152 153 2.370849 ACCGGTCTTCCTTAGCTTTTCA 59.629 45.455 0.00 0.00 0.00 2.69
153 154 2.742589 CACCGGTCTTCCTTAGCTTTTC 59.257 50.000 2.59 0.00 0.00 2.29
154 155 2.552373 CCACCGGTCTTCCTTAGCTTTT 60.552 50.000 2.59 0.00 0.00 2.27
155 156 1.003233 CCACCGGTCTTCCTTAGCTTT 59.997 52.381 2.59 0.00 0.00 3.51
156 157 0.613777 CCACCGGTCTTCCTTAGCTT 59.386 55.000 2.59 0.00 0.00 3.74
157 158 0.252103 TCCACCGGTCTTCCTTAGCT 60.252 55.000 2.59 0.00 0.00 3.32
158 159 0.611714 TTCCACCGGTCTTCCTTAGC 59.388 55.000 2.59 0.00 0.00 3.09
159 160 3.072211 GTTTTCCACCGGTCTTCCTTAG 58.928 50.000 2.59 0.00 0.00 2.18
160 161 2.224597 GGTTTTCCACCGGTCTTCCTTA 60.225 50.000 2.59 0.00 40.31 2.69
161 162 1.478105 GGTTTTCCACCGGTCTTCCTT 60.478 52.381 2.59 0.00 40.31 3.36
162 163 0.109913 GGTTTTCCACCGGTCTTCCT 59.890 55.000 2.59 0.00 40.31 3.36
163 164 2.637521 GGTTTTCCACCGGTCTTCC 58.362 57.895 2.59 0.00 40.31 3.46
202 203 6.463262 GCACGCGTTTTCAACTTTTTATTTTT 59.537 30.769 10.22 0.00 0.00 1.94
203 204 5.954922 GCACGCGTTTTCAACTTTTTATTTT 59.045 32.000 10.22 0.00 0.00 1.82
204 205 5.485831 GCACGCGTTTTCAACTTTTTATTT 58.514 33.333 10.22 0.00 0.00 1.40
205 206 4.316792 CGCACGCGTTTTCAACTTTTTATT 60.317 37.500 10.22 0.00 34.35 1.40
206 207 3.178814 CGCACGCGTTTTCAACTTTTTAT 59.821 39.130 10.22 0.00 34.35 1.40
207 208 2.526688 CGCACGCGTTTTCAACTTTTTA 59.473 40.909 10.22 0.00 34.35 1.52
208 209 1.319079 CGCACGCGTTTTCAACTTTTT 59.681 42.857 10.22 0.00 34.35 1.94
209 210 0.911184 CGCACGCGTTTTCAACTTTT 59.089 45.000 10.22 0.00 34.35 2.27
210 211 0.863957 CCGCACGCGTTTTCAACTTT 60.864 50.000 10.22 0.00 37.81 2.66
211 212 1.298041 CCGCACGCGTTTTCAACTT 60.298 52.632 10.22 0.00 37.81 2.66
212 213 1.707239 TTCCGCACGCGTTTTCAACT 61.707 50.000 10.22 0.00 37.81 3.16
213 214 0.862283 TTTCCGCACGCGTTTTCAAC 60.862 50.000 10.22 0.00 37.81 3.18
214 215 0.179171 TTTTCCGCACGCGTTTTCAA 60.179 45.000 10.22 0.00 37.81 2.69
215 216 0.179171 TTTTTCCGCACGCGTTTTCA 60.179 45.000 10.22 0.00 37.81 2.69
216 217 1.125270 ATTTTTCCGCACGCGTTTTC 58.875 45.000 10.22 0.04 37.81 2.29
217 218 2.402640 TATTTTTCCGCACGCGTTTT 57.597 40.000 10.22 0.00 37.81 2.43
218 219 2.402640 TTATTTTTCCGCACGCGTTT 57.597 40.000 10.22 0.00 37.81 3.60
219 220 2.402640 TTTATTTTTCCGCACGCGTT 57.597 40.000 10.22 0.00 37.81 4.84
220 221 2.402640 TTTTATTTTTCCGCACGCGT 57.597 40.000 5.58 5.58 37.81 6.01
238 239 7.161404 GGGTGCTTCTTCTGGATTTTATTTTT 58.839 34.615 0.00 0.00 0.00 1.94
239 240 6.269769 TGGGTGCTTCTTCTGGATTTTATTTT 59.730 34.615 0.00 0.00 0.00 1.82
240 241 5.779771 TGGGTGCTTCTTCTGGATTTTATTT 59.220 36.000 0.00 0.00 0.00 1.40
241 242 5.332743 TGGGTGCTTCTTCTGGATTTTATT 58.667 37.500 0.00 0.00 0.00 1.40
242 243 4.934356 TGGGTGCTTCTTCTGGATTTTAT 58.066 39.130 0.00 0.00 0.00 1.40
243 244 4.042809 TCTGGGTGCTTCTTCTGGATTTTA 59.957 41.667 0.00 0.00 0.00 1.52
244 245 3.160269 CTGGGTGCTTCTTCTGGATTTT 58.840 45.455 0.00 0.00 0.00 1.82
245 246 2.376518 TCTGGGTGCTTCTTCTGGATTT 59.623 45.455 0.00 0.00 0.00 2.17
246 247 1.988107 TCTGGGTGCTTCTTCTGGATT 59.012 47.619 0.00 0.00 0.00 3.01
247 248 1.558756 CTCTGGGTGCTTCTTCTGGAT 59.441 52.381 0.00 0.00 0.00 3.41
248 249 0.979665 CTCTGGGTGCTTCTTCTGGA 59.020 55.000 0.00 0.00 0.00 3.86
249 250 0.676151 GCTCTGGGTGCTTCTTCTGG 60.676 60.000 0.00 0.00 0.00 3.86
250 251 0.035881 TGCTCTGGGTGCTTCTTCTG 59.964 55.000 0.00 0.00 0.00 3.02
251 252 0.036022 GTGCTCTGGGTGCTTCTTCT 59.964 55.000 0.00 0.00 0.00 2.85
252 253 1.294659 CGTGCTCTGGGTGCTTCTTC 61.295 60.000 0.00 0.00 0.00 2.87
253 254 1.302033 CGTGCTCTGGGTGCTTCTT 60.302 57.895 0.00 0.00 0.00 2.52
254 255 2.210013 TCGTGCTCTGGGTGCTTCT 61.210 57.895 0.00 0.00 0.00 2.85
255 256 2.029844 GTCGTGCTCTGGGTGCTTC 61.030 63.158 0.00 0.00 0.00 3.86
256 257 2.031163 GTCGTGCTCTGGGTGCTT 59.969 61.111 0.00 0.00 0.00 3.91
257 258 3.233980 TGTCGTGCTCTGGGTGCT 61.234 61.111 0.00 0.00 0.00 4.40
258 259 3.044305 GTGTCGTGCTCTGGGTGC 61.044 66.667 0.00 0.00 0.00 5.01
259 260 2.734723 CGTGTCGTGCTCTGGGTG 60.735 66.667 0.00 0.00 0.00 4.61
260 261 3.224324 ACGTGTCGTGCTCTGGGT 61.224 61.111 0.00 0.00 39.18 4.51
269 270 2.736995 CCATTCGCCACGTGTCGT 60.737 61.111 19.21 0.00 42.36 4.34
270 271 4.147322 GCCATTCGCCACGTGTCG 62.147 66.667 13.61 13.61 0.00 4.35
271 272 2.742372 AGCCATTCGCCACGTGTC 60.742 61.111 15.65 0.00 38.78 3.67
272 273 3.049674 CAGCCATTCGCCACGTGT 61.050 61.111 15.65 0.00 38.78 4.49
273 274 2.741985 TCAGCCATTCGCCACGTG 60.742 61.111 9.08 9.08 38.78 4.49
274 275 2.434884 CTCAGCCATTCGCCACGT 60.435 61.111 0.00 0.00 38.78 4.49
275 276 2.125552 TCTCAGCCATTCGCCACG 60.126 61.111 0.00 0.00 38.78 4.94
276 277 2.467826 GCTCTCAGCCATTCGCCAC 61.468 63.158 0.00 0.00 38.78 5.01
277 278 2.124983 GCTCTCAGCCATTCGCCA 60.125 61.111 0.00 0.00 38.78 5.69
278 279 2.124983 TGCTCTCAGCCATTCGCC 60.125 61.111 0.00 0.00 41.51 5.54
279 280 2.806856 CGTGCTCTCAGCCATTCGC 61.807 63.158 0.00 0.00 41.51 4.70
280 281 2.806856 GCGTGCTCTCAGCCATTCG 61.807 63.158 0.00 0.00 41.51 3.34
281 282 3.096791 GCGTGCTCTCAGCCATTC 58.903 61.111 0.00 0.00 41.51 2.67
286 287 2.358003 ACTTGGCGTGCTCTCAGC 60.358 61.111 0.00 0.00 42.82 4.26
287 288 2.031516 CCACTTGGCGTGCTCTCAG 61.032 63.158 0.00 0.00 42.42 3.35
288 289 2.031012 CCACTTGGCGTGCTCTCA 59.969 61.111 0.00 0.00 42.42 3.27
298 299 0.099968 CAATGATCAGCGCCACTTGG 59.900 55.000 2.29 0.00 38.53 3.61
299 300 0.524816 GCAATGATCAGCGCCACTTG 60.525 55.000 2.29 0.00 0.00 3.16
300 301 1.805254 GCAATGATCAGCGCCACTT 59.195 52.632 2.29 0.00 0.00 3.16
301 302 3.506108 GCAATGATCAGCGCCACT 58.494 55.556 2.29 0.00 0.00 4.00
307 308 0.307146 GAAGCCTCGCAATGATCAGC 59.693 55.000 0.09 0.00 0.00 4.26
308 309 0.942962 GGAAGCCTCGCAATGATCAG 59.057 55.000 0.09 0.00 0.00 2.90
309 310 0.811219 CGGAAGCCTCGCAATGATCA 60.811 55.000 0.00 0.00 0.00 2.92
310 311 0.530650 TCGGAAGCCTCGCAATGATC 60.531 55.000 0.00 0.00 0.00 2.92
311 312 0.107703 TTCGGAAGCCTCGCAATGAT 60.108 50.000 0.00 0.00 0.00 2.45
312 313 0.740868 CTTCGGAAGCCTCGCAATGA 60.741 55.000 4.57 0.00 0.00 2.57
313 314 0.740868 TCTTCGGAAGCCTCGCAATG 60.741 55.000 12.90 0.00 0.00 2.82
314 315 0.036388 TTCTTCGGAAGCCTCGCAAT 60.036 50.000 12.90 0.00 0.00 3.56
315 316 0.250124 TTTCTTCGGAAGCCTCGCAA 60.250 50.000 12.90 0.00 35.19 4.85
316 317 0.949105 GTTTCTTCGGAAGCCTCGCA 60.949 55.000 12.90 0.00 35.19 5.10
317 318 1.788481 GTTTCTTCGGAAGCCTCGC 59.212 57.895 12.90 0.00 35.19 5.03
318 319 1.956620 GCGTTTCTTCGGAAGCCTCG 61.957 60.000 12.90 15.50 35.19 4.63
319 320 0.670854 AGCGTTTCTTCGGAAGCCTC 60.671 55.000 12.90 4.72 35.19 4.70
320 321 0.670854 GAGCGTTTCTTCGGAAGCCT 60.671 55.000 12.90 4.11 35.19 4.58
321 322 0.949105 TGAGCGTTTCTTCGGAAGCC 60.949 55.000 12.90 2.87 35.19 4.35
322 323 1.079503 ATGAGCGTTTCTTCGGAAGC 58.920 50.000 12.90 1.90 35.19 3.86
323 324 4.389077 AGTTAATGAGCGTTTCTTCGGAAG 59.611 41.667 11.54 11.54 35.19 3.46
324 325 4.312443 AGTTAATGAGCGTTTCTTCGGAA 58.688 39.130 0.00 0.00 0.00 4.30
325 326 3.921677 AGTTAATGAGCGTTTCTTCGGA 58.078 40.909 0.00 0.00 0.00 4.55
326 327 4.863131 ACTAGTTAATGAGCGTTTCTTCGG 59.137 41.667 0.00 0.00 0.00 4.30
327 328 6.234213 CAACTAGTTAATGAGCGTTTCTTCG 58.766 40.000 8.04 0.00 0.00 3.79
328 329 6.016111 GCAACTAGTTAATGAGCGTTTCTTC 58.984 40.000 8.04 0.00 0.00 2.87
329 330 5.701290 AGCAACTAGTTAATGAGCGTTTCTT 59.299 36.000 8.04 0.00 0.00 2.52
330 331 5.238583 AGCAACTAGTTAATGAGCGTTTCT 58.761 37.500 8.04 0.00 0.00 2.52
331 332 5.348997 AGAGCAACTAGTTAATGAGCGTTTC 59.651 40.000 8.04 1.73 0.00 2.78
332 333 5.238583 AGAGCAACTAGTTAATGAGCGTTT 58.761 37.500 8.04 0.00 0.00 3.60
333 334 4.822026 AGAGCAACTAGTTAATGAGCGTT 58.178 39.130 8.04 0.00 0.00 4.84
334 335 4.425520 GAGAGCAACTAGTTAATGAGCGT 58.574 43.478 8.04 0.55 0.00 5.07
335 336 3.483922 CGAGAGCAACTAGTTAATGAGCG 59.516 47.826 8.04 4.86 0.00 5.03
336 337 4.673441 TCGAGAGCAACTAGTTAATGAGC 58.327 43.478 8.04 7.28 0.00 4.26
337 338 6.125327 TCTCGAGAGCAACTAGTTAATGAG 57.875 41.667 12.08 9.77 0.00 2.90
338 339 6.510879 TTCTCGAGAGCAACTAGTTAATGA 57.489 37.500 15.94 0.54 0.00 2.57
339 340 6.809196 ACTTTCTCGAGAGCAACTAGTTAATG 59.191 38.462 15.94 0.00 0.00 1.90
340 341 6.926313 ACTTTCTCGAGAGCAACTAGTTAAT 58.074 36.000 15.94 0.00 0.00 1.40
341 342 6.328641 ACTTTCTCGAGAGCAACTAGTTAA 57.671 37.500 15.94 2.05 0.00 2.01
342 343 5.961396 ACTTTCTCGAGAGCAACTAGTTA 57.039 39.130 15.94 0.00 0.00 2.24
343 344 4.857509 ACTTTCTCGAGAGCAACTAGTT 57.142 40.909 15.94 1.12 0.00 2.24
344 345 4.857509 AACTTTCTCGAGAGCAACTAGT 57.142 40.909 15.94 10.14 0.00 2.57
345 346 5.945155 AGTAACTTTCTCGAGAGCAACTAG 58.055 41.667 15.94 9.57 0.00 2.57
346 347 5.940595 GAGTAACTTTCTCGAGAGCAACTA 58.059 41.667 15.94 0.00 0.00 2.24
347 348 4.800784 GAGTAACTTTCTCGAGAGCAACT 58.199 43.478 15.94 14.81 0.00 3.16
385 386 1.332065 CACTCTCGCTCGCTCTATCAA 59.668 52.381 0.00 0.00 0.00 2.57
413 414 3.052455 TGCGGCATCTCTAACAAAAGA 57.948 42.857 0.00 0.00 0.00 2.52
414 415 3.058293 TGTTGCGGCATCTCTAACAAAAG 60.058 43.478 2.28 0.00 0.00 2.27
475 476 4.391216 CACAAGTACTCAATTCAGAGCTGG 59.609 45.833 0.00 0.00 39.26 4.85
478 479 3.999663 AGCACAAGTACTCAATTCAGAGC 59.000 43.478 0.00 0.00 39.26 4.09
610 641 7.980099 GCTAAAGCTAGTACAAAGTTGGATCTA 59.020 37.037 0.00 0.00 38.21 1.98
615 646 6.204882 AGTTGCTAAAGCTAGTACAAAGTTGG 59.795 38.462 3.26 0.00 42.66 3.77
616 647 7.042051 TCAGTTGCTAAAGCTAGTACAAAGTTG 60.042 37.037 3.26 0.00 42.66 3.16
617 648 6.990349 TCAGTTGCTAAAGCTAGTACAAAGTT 59.010 34.615 3.26 0.00 42.66 2.66
618 649 6.522054 TCAGTTGCTAAAGCTAGTACAAAGT 58.478 36.000 3.26 0.00 42.66 2.66
620 651 6.990349 AGTTCAGTTGCTAAAGCTAGTACAAA 59.010 34.615 3.26 0.00 42.66 2.83
621 652 6.522054 AGTTCAGTTGCTAAAGCTAGTACAA 58.478 36.000 3.26 0.00 42.66 2.41
622 653 6.097915 AGTTCAGTTGCTAAAGCTAGTACA 57.902 37.500 3.26 0.00 42.66 2.90
623 654 7.314393 AGTAGTTCAGTTGCTAAAGCTAGTAC 58.686 38.462 3.26 0.00 42.66 2.73
629 663 6.427242 AGGTTTAGTAGTTCAGTTGCTAAAGC 59.573 38.462 13.42 13.42 44.36 3.51
1085 1229 1.375908 GAGTCAATGTGGGCGAGCA 60.376 57.895 0.00 0.00 0.00 4.26
1090 1234 1.541588 GAGTTTGGAGTCAATGTGGGC 59.458 52.381 0.00 0.00 32.28 5.36
2310 2960 1.275856 AGCTTCAGACCTCAGAGCTTG 59.724 52.381 0.00 0.00 0.00 4.01
2334 2984 4.468510 TGGATACCCACAAGAAAGTACGAT 59.531 41.667 0.00 0.00 37.58 3.73
2335 2985 3.833650 TGGATACCCACAAGAAAGTACGA 59.166 43.478 0.00 0.00 37.58 3.43
2353 3112 5.872617 CACATCAATCAACAATTGCTTGGAT 59.127 36.000 5.05 0.81 43.80 3.41
2432 3191 2.167075 CTGAAAATGCCAACCATCCCTC 59.833 50.000 0.00 0.00 31.43 4.30
2433 3192 2.181975 CTGAAAATGCCAACCATCCCT 58.818 47.619 0.00 0.00 31.43 4.20
2434 3193 1.901833 ACTGAAAATGCCAACCATCCC 59.098 47.619 0.00 0.00 31.43 3.85
2463 3222 8.206867 TGCTACAATTCTTATAGCTCTGTCATT 58.793 33.333 0.00 0.00 41.58 2.57
2464 3223 7.730084 TGCTACAATTCTTATAGCTCTGTCAT 58.270 34.615 0.00 0.00 41.58 3.06
2470 3229 7.644986 AACGATGCTACAATTCTTATAGCTC 57.355 36.000 0.00 0.00 41.58 4.09
2473 3232 9.256477 TGGTAAACGATGCTACAATTCTTATAG 57.744 33.333 0.00 0.00 0.00 1.31
2483 3242 2.753055 TGCTGGTAAACGATGCTACA 57.247 45.000 0.00 0.00 0.00 2.74
2498 3257 1.826921 GGCACTGATCCCCATGCTG 60.827 63.158 7.31 0.00 38.18 4.41
2510 3269 4.020617 TCCGCTCCCAAGGCACTG 62.021 66.667 0.00 0.00 40.86 3.66
2513 3272 3.706373 GAGTCCGCTCCCAAGGCA 61.706 66.667 0.00 0.00 35.76 4.75
2528 3287 6.975196 TCTCTTTCTAATCTCTGGATGGAG 57.025 41.667 0.00 0.00 31.75 3.86
2564 3323 5.782893 AGTAGGCTCATGAACTAGCTAAG 57.217 43.478 6.97 0.00 38.80 2.18
2569 3328 7.721402 AGTAATCAAGTAGGCTCATGAACTAG 58.279 38.462 6.97 0.00 0.00 2.57
2570 3329 7.561722 AGAGTAATCAAGTAGGCTCATGAACTA 59.438 37.037 0.00 0.00 0.00 2.24
2571 3330 6.382570 AGAGTAATCAAGTAGGCTCATGAACT 59.617 38.462 0.00 0.55 0.00 3.01
2572 3331 6.578023 AGAGTAATCAAGTAGGCTCATGAAC 58.422 40.000 0.00 0.00 0.00 3.18
2573 3332 6.798427 AGAGTAATCAAGTAGGCTCATGAA 57.202 37.500 0.00 0.00 0.00 2.57
2574 3333 6.183360 GGAAGAGTAATCAAGTAGGCTCATGA 60.183 42.308 0.00 0.00 0.00 3.07
2575 3334 5.988561 GGAAGAGTAATCAAGTAGGCTCATG 59.011 44.000 0.00 0.00 0.00 3.07
2576 3335 5.902431 AGGAAGAGTAATCAAGTAGGCTCAT 59.098 40.000 0.00 0.00 0.00 2.90
2577 3336 5.273208 AGGAAGAGTAATCAAGTAGGCTCA 58.727 41.667 0.00 0.00 0.00 4.26
2578 3337 5.862678 AGGAAGAGTAATCAAGTAGGCTC 57.137 43.478 0.00 0.00 0.00 4.70
2579 3338 7.922699 AATAGGAAGAGTAATCAAGTAGGCT 57.077 36.000 0.00 0.00 0.00 4.58
2580 3339 8.639761 TGTAATAGGAAGAGTAATCAAGTAGGC 58.360 37.037 0.00 0.00 0.00 3.93
2584 3343 9.256228 TCACTGTAATAGGAAGAGTAATCAAGT 57.744 33.333 0.00 0.00 0.00 3.16
2587 3346 9.421399 TGATCACTGTAATAGGAAGAGTAATCA 57.579 33.333 0.00 0.00 0.00 2.57
2590 3349 8.188799 CGTTGATCACTGTAATAGGAAGAGTAA 58.811 37.037 0.00 0.00 0.00 2.24
2591 3350 7.555195 TCGTTGATCACTGTAATAGGAAGAGTA 59.445 37.037 0.00 0.00 0.00 2.59
2592 3351 6.377429 TCGTTGATCACTGTAATAGGAAGAGT 59.623 38.462 0.00 0.00 0.00 3.24
2593 3352 6.796426 TCGTTGATCACTGTAATAGGAAGAG 58.204 40.000 0.00 0.00 0.00 2.85
2594 3353 6.769134 TCGTTGATCACTGTAATAGGAAGA 57.231 37.500 0.00 0.00 0.00 2.87
2595 3354 7.203218 TCATCGTTGATCACTGTAATAGGAAG 58.797 38.462 0.00 0.00 0.00 3.46
2596 3355 7.107639 TCATCGTTGATCACTGTAATAGGAA 57.892 36.000 0.00 0.00 0.00 3.36
2597 3356 6.709018 TCATCGTTGATCACTGTAATAGGA 57.291 37.500 0.00 0.00 0.00 2.94
2598 3357 9.080915 CATATCATCGTTGATCACTGTAATAGG 57.919 37.037 12.14 0.00 41.73 2.57
2599 3358 9.631452 ACATATCATCGTTGATCACTGTAATAG 57.369 33.333 12.14 0.00 41.73 1.73
2600 3359 9.410556 CACATATCATCGTTGATCACTGTAATA 57.589 33.333 12.14 0.00 41.73 0.98
2601 3360 7.928167 ACACATATCATCGTTGATCACTGTAAT 59.072 33.333 12.14 5.14 41.73 1.89
2602 3361 7.264947 ACACATATCATCGTTGATCACTGTAA 58.735 34.615 12.14 0.00 41.73 2.41
2603 3362 6.805713 ACACATATCATCGTTGATCACTGTA 58.194 36.000 12.14 0.00 41.73 2.74
2604 3363 5.664457 ACACATATCATCGTTGATCACTGT 58.336 37.500 12.14 11.37 41.73 3.55
2605 3364 7.698836 TTACACATATCATCGTTGATCACTG 57.301 36.000 12.14 10.84 41.73 3.66
2606 3365 8.716646 TTTTACACATATCATCGTTGATCACT 57.283 30.769 12.14 0.00 41.73 3.41
2607 3366 9.586150 GATTTTACACATATCATCGTTGATCAC 57.414 33.333 12.14 0.00 41.73 3.06
2608 3367 9.546428 AGATTTTACACATATCATCGTTGATCA 57.454 29.630 12.14 0.00 41.73 2.92
2609 3368 9.803130 CAGATTTTACACATATCATCGTTGATC 57.197 33.333 12.14 0.00 41.73 2.92
2610 3369 9.546428 TCAGATTTTACACATATCATCGTTGAT 57.454 29.630 13.25 13.25 44.76 2.57
2611 3370 8.940768 TCAGATTTTACACATATCATCGTTGA 57.059 30.769 0.00 0.00 36.00 3.18
2612 3371 9.642312 CTTCAGATTTTACACATATCATCGTTG 57.358 33.333 0.00 0.00 0.00 4.10
2613 3372 9.599866 TCTTCAGATTTTACACATATCATCGTT 57.400 29.630 0.00 0.00 0.00 3.85
2614 3373 9.035607 GTCTTCAGATTTTACACATATCATCGT 57.964 33.333 0.00 0.00 0.00 3.73
2615 3374 9.034544 TGTCTTCAGATTTTACACATATCATCG 57.965 33.333 0.00 0.00 0.00 3.84
2618 3377 9.889128 TCATGTCTTCAGATTTTACACATATCA 57.111 29.630 0.00 0.00 0.00 2.15
2626 3385 9.928236 GCTCTAATTCATGTCTTCAGATTTTAC 57.072 33.333 0.00 0.00 0.00 2.01
2627 3386 9.671279 TGCTCTAATTCATGTCTTCAGATTTTA 57.329 29.630 0.00 0.00 0.00 1.52
2628 3387 8.571461 TGCTCTAATTCATGTCTTCAGATTTT 57.429 30.769 0.00 0.00 0.00 1.82
2629 3388 8.749026 ATGCTCTAATTCATGTCTTCAGATTT 57.251 30.769 0.00 0.00 0.00 2.17
2630 3389 8.212312 AGATGCTCTAATTCATGTCTTCAGATT 58.788 33.333 0.00 0.00 0.00 2.40
2631 3390 7.737869 AGATGCTCTAATTCATGTCTTCAGAT 58.262 34.615 0.00 0.00 0.00 2.90
2632 3391 7.122138 AGATGCTCTAATTCATGTCTTCAGA 57.878 36.000 0.00 0.00 0.00 3.27
2633 3392 6.424509 GGAGATGCTCTAATTCATGTCTTCAG 59.575 42.308 0.00 0.00 34.55 3.02
2634 3393 6.126968 TGGAGATGCTCTAATTCATGTCTTCA 60.127 38.462 0.00 0.00 34.55 3.02
2635 3394 6.286758 TGGAGATGCTCTAATTCATGTCTTC 58.713 40.000 0.00 0.00 34.55 2.87
2636 3395 6.244552 TGGAGATGCTCTAATTCATGTCTT 57.755 37.500 0.00 0.00 34.55 3.01
2637 3396 5.883685 TGGAGATGCTCTAATTCATGTCT 57.116 39.130 0.00 0.00 34.55 3.41
2638 3397 8.093307 TCTATTGGAGATGCTCTAATTCATGTC 58.907 37.037 10.57 0.00 38.24 3.06
2639 3398 7.877097 GTCTATTGGAGATGCTCTAATTCATGT 59.123 37.037 10.57 0.00 38.24 3.21
2640 3399 7.063191 CGTCTATTGGAGATGCTCTAATTCATG 59.937 40.741 10.57 0.00 38.24 3.07
2641 3400 7.095910 CGTCTATTGGAGATGCTCTAATTCAT 58.904 38.462 10.57 0.00 38.24 2.57
2642 3401 6.450545 CGTCTATTGGAGATGCTCTAATTCA 58.549 40.000 10.57 0.00 38.24 2.57
2643 3402 5.866633 CCGTCTATTGGAGATGCTCTAATTC 59.133 44.000 10.57 3.48 38.24 2.17
2644 3403 5.305644 ACCGTCTATTGGAGATGCTCTAATT 59.694 40.000 10.57 0.00 38.24 1.40
2675 3434 8.640063 ACGGTCCAAAAGTTAGGTATTTTTAT 57.360 30.769 0.00 0.00 0.00 1.40
3244 4056 1.663702 GGACACGAACACCACGAGG 60.664 63.158 0.00 0.00 42.21 4.63
3288 4100 2.111999 TACGTGCTCCTTTGCCAGCT 62.112 55.000 0.00 0.00 36.53 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.