Multiple sequence alignment - TraesCS2D01G168500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G168500 chr2D 100.000 8628 0 0 1 8628 112548468 112539841 0.000000e+00 15934.0
1 TraesCS2D01G168500 chr2D 79.530 894 139 32 7649 8528 572644581 572645444 1.600000e-166 597.0
2 TraesCS2D01G168500 chr2D 93.130 131 8 1 7245 7374 112541092 112540962 3.180000e-44 191.0
3 TraesCS2D01G168500 chr2D 93.130 131 8 1 7377 7507 112541224 112541095 3.180000e-44 191.0
4 TraesCS2D01G168500 chr2D 97.872 94 2 0 4564 4657 643762841 643762748 6.930000e-36 163.0
5 TraesCS2D01G168500 chr2D 94.059 101 4 2 4555 4654 154158789 154158888 1.500000e-32 152.0
6 TraesCS2D01G168500 chr2A 92.912 2455 118 33 4667 7082 113819136 113816699 0.000000e+00 3518.0
7 TraesCS2D01G168500 chr2A 91.106 1248 81 14 3320 4566 113820352 113819134 0.000000e+00 1663.0
8 TraesCS2D01G168500 chr2A 91.488 1210 96 5 1664 2869 113822293 113821087 0.000000e+00 1657.0
9 TraesCS2D01G168500 chr2A 91.725 713 33 11 953 1665 113823143 113822457 0.000000e+00 966.0
10 TraesCS2D01G168500 chr2A 83.878 949 124 17 1 940 113827119 113826191 0.000000e+00 878.0
11 TraesCS2D01G168500 chr2A 81.261 587 81 17 8044 8627 113810474 113809914 1.710000e-121 448.0
12 TraesCS2D01G168500 chr2A 89.595 346 32 3 7649 7991 113812973 113812629 3.700000e-118 436.0
13 TraesCS2D01G168500 chr2A 89.474 266 22 5 3039 3301 113820722 113820460 1.800000e-86 331.0
14 TraesCS2D01G168500 chr2A 89.773 176 14 3 2868 3039 113821032 113820857 1.130000e-53 222.0
15 TraesCS2D01G168500 chr2A 92.727 55 4 0 7377 7431 113814329 113814275 7.180000e-11 80.5
16 TraesCS2D01G168500 chr2A 89.362 47 5 0 2937 2983 728750616 728750570 9.350000e-05 60.2
17 TraesCS2D01G168500 chr2B 92.518 2085 97 30 5057 7103 162865888 162863825 0.000000e+00 2931.0
18 TraesCS2D01G168500 chr2B 87.269 2058 180 40 1 2034 162871482 162869483 0.000000e+00 2274.0
19 TraesCS2D01G168500 chr2B 91.380 1543 86 28 7099 8627 162863708 162862199 0.000000e+00 2069.0
20 TraesCS2D01G168500 chr2B 92.258 1240 73 8 3328 4566 162867857 162866640 0.000000e+00 1736.0
21 TraesCS2D01G168500 chr2B 91.228 855 61 8 2023 2868 162869466 162868617 0.000000e+00 1151.0
22 TraesCS2D01G168500 chr2B 80.403 893 140 28 7654 8530 229792643 229791770 0.000000e+00 647.0
23 TraesCS2D01G168500 chr2B 91.899 395 23 5 4667 5053 162866642 162866249 2.120000e-150 544.0
24 TraesCS2D01G168500 chr2B 88.015 267 26 5 3039 3300 162868246 162867981 2.340000e-80 311.0
25 TraesCS2D01G168500 chr2B 88.166 169 18 2 7482 7649 162868305 162868138 5.280000e-47 200.0
26 TraesCS2D01G168500 chr2B 100.000 31 0 0 2937 2967 754609498 754609528 3.360000e-04 58.4
27 TraesCS2D01G168500 chr5D 82.143 896 120 22 7649 8526 223869660 223870533 0.000000e+00 732.0
28 TraesCS2D01G168500 chr5D 94.000 100 5 1 4559 4657 228447063 228446964 5.400000e-32 150.0
29 TraesCS2D01G168500 chr7D 80.089 899 144 29 7645 8530 112011728 112012604 3.400000e-178 636.0
30 TraesCS2D01G168500 chr7D 96.907 97 1 2 4559 4654 190163115 190163210 2.490000e-35 161.0
31 TraesCS2D01G168500 chr7B 79.663 890 141 25 7649 8524 521203231 521202368 9.580000e-169 604.0
32 TraesCS2D01G168500 chr6A 79.418 894 151 28 7649 8530 414261890 414261018 1.240000e-167 601.0
33 TraesCS2D01G168500 chr3D 79.372 892 148 28 7649 8526 402499064 402499933 5.770000e-166 595.0
34 TraesCS2D01G168500 chr5B 80.448 803 123 29 7649 8440 674343160 674342381 4.490000e-162 582.0
35 TraesCS2D01G168500 chr5B 78.152 682 95 35 7649 8321 649001299 649000663 1.360000e-102 385.0
36 TraesCS2D01G168500 chr5B 84.173 278 38 4 8191 8468 556141164 556140893 1.850000e-66 265.0
37 TraesCS2D01G168500 chr5B 97.059 34 1 0 2937 2970 595667862 595667829 3.360000e-04 58.4
38 TraesCS2D01G168500 chr4D 80.267 674 88 29 7649 8278 471159594 471158922 4.720000e-127 466.0
39 TraesCS2D01G168500 chr4D 86.705 346 43 3 7649 7991 483666181 483665836 1.760000e-101 381.0
40 TraesCS2D01G168500 chr4D 94.393 107 3 3 4553 4657 12354805 12354700 2.490000e-35 161.0
41 TraesCS2D01G168500 chr4D 84.337 166 21 4 7138 7299 471165932 471165768 3.220000e-34 158.0
42 TraesCS2D01G168500 chr4D 100.000 30 0 0 2937 2966 215393697 215393668 1.000000e-03 56.5
43 TraesCS2D01G168500 chr4B 79.924 528 91 12 8012 8528 105008767 105009290 2.940000e-99 374.0
44 TraesCS2D01G168500 chr4B 82.500 160 18 4 7192 7341 105006302 105006461 1.950000e-26 132.0
45 TraesCS2D01G168500 chr6D 80.580 448 75 9 8084 8528 363905031 363905469 1.390000e-87 335.0
46 TraesCS2D01G168500 chr6D 95.122 41 2 0 2463 2503 3747929 3747969 2.010000e-06 65.8
47 TraesCS2D01G168500 chr5A 95.960 99 3 1 4560 4657 702581599 702581697 8.960000e-35 159.0
48 TraesCS2D01G168500 chr1B 95.000 100 4 1 4559 4657 555629493 555629394 1.160000e-33 156.0
49 TraesCS2D01G168500 chr1B 90.196 51 5 0 2937 2987 610300477 610300427 5.590000e-07 67.6
50 TraesCS2D01G168500 chr1B 97.059 34 1 0 2937 2970 204398397 204398364 3.360000e-04 58.4
51 TraesCS2D01G168500 chr1B 100.000 31 0 0 2937 2967 384039263 384039293 3.360000e-04 58.4
52 TraesCS2D01G168500 chr1A 95.000 100 4 1 4559 4657 508633125 508633026 1.160000e-33 156.0
53 TraesCS2D01G168500 chr1A 93.333 105 6 1 4554 4657 58289710 58289814 4.170000e-33 154.0
54 TraesCS2D01G168500 chr3A 97.561 41 1 0 2463 2503 1571858 1571898 4.320000e-08 71.3
55 TraesCS2D01G168500 chr6B 97.222 36 1 0 2465 2500 9052420 9052455 2.600000e-05 62.1
56 TraesCS2D01G168500 chr1D 88.235 51 4 2 2937 2986 483527309 483527260 9.350000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G168500 chr2D 112539841 112548468 8627 True 15934.00 15934 100.000000 1 8628 1 chr2D.!!$R1 8627
1 TraesCS2D01G168500 chr2D 572644581 572645444 863 False 597.00 597 79.530000 7649 8528 1 chr2D.!!$F2 879
2 TraesCS2D01G168500 chr2A 113809914 113827119 17205 True 1019.95 3518 89.393900 1 8627 10 chr2A.!!$R2 8626
3 TraesCS2D01G168500 chr2B 162862199 162871482 9283 True 1402.00 2931 90.341625 1 8627 8 chr2B.!!$R2 8626
4 TraesCS2D01G168500 chr2B 229791770 229792643 873 True 647.00 647 80.403000 7654 8530 1 chr2B.!!$R1 876
5 TraesCS2D01G168500 chr5D 223869660 223870533 873 False 732.00 732 82.143000 7649 8526 1 chr5D.!!$F1 877
6 TraesCS2D01G168500 chr7D 112011728 112012604 876 False 636.00 636 80.089000 7645 8530 1 chr7D.!!$F1 885
7 TraesCS2D01G168500 chr7B 521202368 521203231 863 True 604.00 604 79.663000 7649 8524 1 chr7B.!!$R1 875
8 TraesCS2D01G168500 chr6A 414261018 414261890 872 True 601.00 601 79.418000 7649 8530 1 chr6A.!!$R1 881
9 TraesCS2D01G168500 chr3D 402499064 402499933 869 False 595.00 595 79.372000 7649 8526 1 chr3D.!!$F1 877
10 TraesCS2D01G168500 chr5B 674342381 674343160 779 True 582.00 582 80.448000 7649 8440 1 chr5B.!!$R4 791
11 TraesCS2D01G168500 chr5B 649000663 649001299 636 True 385.00 385 78.152000 7649 8321 1 chr5B.!!$R3 672
12 TraesCS2D01G168500 chr4D 471158922 471159594 672 True 466.00 466 80.267000 7649 8278 1 chr4D.!!$R3 629
13 TraesCS2D01G168500 chr4B 105006302 105009290 2988 False 253.00 374 81.212000 7192 8528 2 chr4B.!!$F1 1336


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 601 0.037882 CAGCAGCAGACGAGAAGGAA 60.038 55.0 0.00 0.0 0.00 3.36 F
763 775 0.109342 GGACAATCGGGCTGATCCAT 59.891 55.0 9.72 0.0 35.84 3.41 F
992 4039 0.736053 GGAAATACAAATGGCGCGGA 59.264 50.0 8.83 0.0 0.00 5.54 F
2853 6105 0.680061 GGTAGTTAGGGATGGGCTCG 59.320 60.0 0.00 0.0 0.00 5.03 F
4577 8133 0.032017 AATGCTACTCCCTCCGTCCT 60.032 55.0 0.00 0.0 0.00 3.85 F
4658 8214 0.177141 TATTTTGGACGGAGGGAGCG 59.823 55.0 0.00 0.0 0.00 5.03 F
6238 10183 0.175989 CTTGACTCTACCTTCGCCCC 59.824 60.0 0.00 0.0 0.00 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1394 4441 0.038310 CCAAAACCTCCCAGAGTCCC 59.962 60.0 0.00 0.0 0.0 4.46 R
1785 4997 0.317479 ATCCTACCTATTGCGTCGCC 59.683 55.0 15.88 0.0 0.0 5.54 R
2874 6126 0.108138 AGCCCGAAGTCAAATCCGAG 60.108 55.0 0.00 0.0 0.0 4.63 R
4639 8195 0.177141 CGCTCCCTCCGTCCAAAATA 59.823 55.0 0.00 0.0 0.0 1.40 R
6219 10163 0.175989 GGGGCGAAGGTAGAGTCAAG 59.824 60.0 0.00 0.0 0.0 3.02 R
6401 10348 0.254299 AGGGTGGAATGAAGGGGGAT 60.254 55.0 0.00 0.0 0.0 3.85 R
7913 15320 0.324943 CCGGAGTTGACCACCTCATT 59.675 55.0 0.00 0.0 0.0 2.57 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 171 6.834168 TCAGATGTCTATGTGAGTGTTGTA 57.166 37.500 0.00 0.00 32.23 2.41
189 200 5.431420 TTTTATGTGTCACGAGCATTTGT 57.569 34.783 0.00 0.00 0.00 2.83
190 201 5.431420 TTTATGTGTCACGAGCATTTGTT 57.569 34.783 0.00 0.00 0.00 2.83
191 202 3.988379 ATGTGTCACGAGCATTTGTTT 57.012 38.095 0.00 0.00 0.00 2.83
192 203 3.063670 TGTGTCACGAGCATTTGTTTG 57.936 42.857 0.00 0.00 0.00 2.93
210 221 4.863689 TGTTTGAAAACAGTGCATGAACAG 59.136 37.500 6.60 0.00 43.45 3.16
222 233 3.568007 TGCATGAACAGTCCTTTACAACC 59.432 43.478 0.00 0.00 0.00 3.77
270 281 0.755327 AAAACAACGAGGCCCTTGCT 60.755 50.000 0.00 0.00 37.74 3.91
287 298 4.702131 CCTTGCTTTATGCCTACAAAGTCT 59.298 41.667 0.00 0.00 42.00 3.24
291 302 4.082787 GCTTTATGCCTACAAAGTCTGCAA 60.083 41.667 0.00 0.00 35.30 4.08
294 305 3.921119 TGCCTACAAAGTCTGCAAATG 57.079 42.857 0.00 0.00 0.00 2.32
296 307 2.855180 CCTACAAAGTCTGCAAATGCG 58.145 47.619 0.35 0.00 45.83 4.73
298 309 2.405892 ACAAAGTCTGCAAATGCGAC 57.594 45.000 16.88 16.88 45.83 5.19
303 314 0.169009 GTCTGCAAATGCGACCTTCC 59.831 55.000 14.93 0.00 45.83 3.46
306 317 2.016318 CTGCAAATGCGACCTTCCATA 58.984 47.619 0.35 0.00 45.83 2.74
323 334 7.050377 CCTTCCATACATACAACAACTCATCT 58.950 38.462 0.00 0.00 0.00 2.90
325 336 8.492673 TTCCATACATACAACAACTCATCTTC 57.507 34.615 0.00 0.00 0.00 2.87
344 355 4.840680 TCTTCCATCATCGAGTATCCCAAT 59.159 41.667 0.00 0.00 0.00 3.16
410 421 7.750229 AACTATATGGCATTTGATCGAACAT 57.250 32.000 4.78 0.34 0.00 2.71
416 427 4.571984 TGGCATTTGATCGAACATCTGTAG 59.428 41.667 0.00 0.00 0.00 2.74
427 438 2.054799 ACATCTGTAGGGTGTGGTGTT 58.945 47.619 0.00 0.00 0.00 3.32
440 451 1.072505 GGTGTTCACCATGGACGGT 59.927 57.895 21.47 0.00 41.07 4.83
507 518 1.198759 ACGGTGGCATAGTCCAAGGT 61.199 55.000 0.00 0.00 37.96 3.50
536 547 1.828768 GTGGGAGAGGGATGCAGAG 59.171 63.158 0.00 0.00 0.00 3.35
542 553 2.039624 AGGGATGCAGAGGTCCGT 59.960 61.111 0.00 0.00 35.28 4.69
545 556 2.660064 GGATGCAGAGGTCCGTGGT 61.660 63.158 0.00 0.00 0.00 4.16
590 601 0.037882 CAGCAGCAGACGAGAAGGAA 60.038 55.000 0.00 0.00 0.00 3.36
596 607 0.734253 CAGACGAGAAGGAAGGTGCG 60.734 60.000 0.00 0.00 0.00 5.34
613 624 1.459450 GCGGATGCAAAGTAAAGGGA 58.541 50.000 0.00 0.00 42.15 4.20
618 629 4.698304 CGGATGCAAAGTAAAGGGAAAGTA 59.302 41.667 0.00 0.00 0.00 2.24
645 657 0.396811 AGTGGAAGGAAAGTGGACCG 59.603 55.000 0.00 0.00 0.00 4.79
688 700 1.341531 GGATGTCGGAGTCCTATGTGG 59.658 57.143 7.77 0.00 37.10 4.17
689 701 0.753262 ATGTCGGAGTCCTATGTGGC 59.247 55.000 7.77 0.00 35.26 5.01
696 708 3.845259 TCCTATGTGGCGGCGGTC 61.845 66.667 9.78 0.00 35.26 4.79
697 709 3.849951 CCTATGTGGCGGCGGTCT 61.850 66.667 9.78 0.00 0.00 3.85
706 718 4.778415 CGGCGGTCTGGACACTCG 62.778 72.222 0.00 0.00 0.00 4.18
707 719 3.681835 GGCGGTCTGGACACTCGT 61.682 66.667 3.10 0.00 0.00 4.18
710 722 1.303799 GCGGTCTGGACACTCGTAGA 61.304 60.000 3.10 0.00 0.00 2.59
724 736 1.373812 GTAGAGCACCCCCGTTTGT 59.626 57.895 0.00 0.00 0.00 2.83
725 737 0.953960 GTAGAGCACCCCCGTTTGTG 60.954 60.000 0.00 0.00 35.58 3.33
739 751 2.888464 TTTGTGTCCGGTTTGCGGGA 62.888 55.000 0.00 0.00 41.10 5.14
750 762 1.201414 GTTTGCGGGAATTCGGACAAT 59.799 47.619 0.00 0.00 0.00 2.71
754 766 1.157870 CGGGAATTCGGACAATCGGG 61.158 60.000 0.00 0.00 0.00 5.14
758 770 0.251916 AATTCGGACAATCGGGCTGA 59.748 50.000 0.00 0.00 0.00 4.26
762 774 1.526887 GGACAATCGGGCTGATCCA 59.473 57.895 9.72 0.00 35.84 3.41
763 775 0.109342 GGACAATCGGGCTGATCCAT 59.891 55.000 9.72 0.00 35.84 3.41
767 779 2.705658 ACAATCGGGCTGATCCATAGAA 59.294 45.455 9.72 0.00 35.84 2.10
771 783 1.273606 CGGGCTGATCCATAGAACGAT 59.726 52.381 0.00 0.00 36.21 3.73
773 785 2.300152 GGGCTGATCCATAGAACGATGA 59.700 50.000 0.00 0.00 36.21 2.92
781 793 4.274978 TCCATAGAACGATGAGTACCACA 58.725 43.478 0.00 0.00 0.00 4.17
789 801 3.133691 CGATGAGTACCACATTGGATGG 58.866 50.000 0.00 0.00 40.96 3.51
798 810 2.615747 CCACATTGGATGGCAAATTGCA 60.616 45.455 20.27 6.44 42.58 4.08
802 814 8.578637 CCACATTGGATGGCAAATTGCATCTA 62.579 42.308 20.27 14.44 42.58 1.98
810 822 3.692576 GCAAATTGCATCTAGACAGCTG 58.307 45.455 13.48 13.48 44.26 4.24
826 844 3.530910 CTGGTCCGGACGGTTGCTT 62.531 63.158 27.68 0.00 36.47 3.91
842 860 1.536073 GCTTGGCTTTTGAGGGTCCC 61.536 60.000 0.00 0.00 0.00 4.46
855 874 2.202892 GTCCCGTCGAAGATGCCC 60.203 66.667 0.00 0.00 43.31 5.36
858 877 1.078426 CCCGTCGAAGATGCCCTTT 60.078 57.895 0.00 0.00 43.31 3.11
860 879 1.287425 CCGTCGAAGATGCCCTTTAC 58.713 55.000 0.00 0.00 43.31 2.01
861 880 1.404986 CCGTCGAAGATGCCCTTTACA 60.405 52.381 0.00 0.00 43.31 2.41
862 881 2.343101 CGTCGAAGATGCCCTTTACAA 58.657 47.619 0.00 0.00 40.67 2.41
863 882 2.936498 CGTCGAAGATGCCCTTTACAAT 59.064 45.455 0.00 0.00 40.67 2.71
864 883 3.374058 CGTCGAAGATGCCCTTTACAATT 59.626 43.478 0.00 0.00 40.67 2.32
868 887 6.308041 GTCGAAGATGCCCTTTACAATTTTTC 59.692 38.462 0.00 0.00 40.67 2.29
966 985 9.025041 AGATAGAGATAAAAACAAAAACCCCAG 57.975 33.333 0.00 0.00 0.00 4.45
973 4020 5.384063 AAAACAAAAACCCCAGCAAAAAG 57.616 34.783 0.00 0.00 0.00 2.27
974 4021 2.997980 ACAAAAACCCCAGCAAAAAGG 58.002 42.857 0.00 0.00 0.00 3.11
980 4027 4.617253 AACCCCAGCAAAAAGGAAATAC 57.383 40.909 0.00 0.00 0.00 1.89
992 4039 0.736053 GGAAATACAAATGGCGCGGA 59.264 50.000 8.83 0.00 0.00 5.54
1045 4092 1.667830 CGCACCGCTTTTCTCCTCA 60.668 57.895 0.00 0.00 0.00 3.86
1296 4343 5.087397 CGTGTTTTTCCGCCGATTATTTTA 58.913 37.500 0.00 0.00 0.00 1.52
1320 4367 1.166531 GGTTTGGTCTTGCTGCGTCT 61.167 55.000 0.00 0.00 0.00 4.18
1380 4427 2.599281 TCGGCTCGTCTGGGTTCA 60.599 61.111 0.00 0.00 0.00 3.18
1381 4428 2.125912 CGGCTCGTCTGGGTTCAG 60.126 66.667 0.00 0.00 42.21 3.02
1382 4429 2.932234 CGGCTCGTCTGGGTTCAGT 61.932 63.158 0.00 0.00 41.59 3.41
1393 4440 1.826487 GGTTCAGTGGCGGTGGTTT 60.826 57.895 0.00 0.00 0.00 3.27
1394 4441 1.358759 GTTCAGTGGCGGTGGTTTG 59.641 57.895 0.00 0.00 0.00 2.93
1395 4442 1.826054 TTCAGTGGCGGTGGTTTGG 60.826 57.895 0.00 0.00 0.00 3.28
1396 4443 3.294493 CAGTGGCGGTGGTTTGGG 61.294 66.667 0.00 0.00 0.00 4.12
1397 4444 3.494254 AGTGGCGGTGGTTTGGGA 61.494 61.111 0.00 0.00 0.00 4.37
1398 4445 3.292159 GTGGCGGTGGTTTGGGAC 61.292 66.667 0.00 0.00 0.00 4.46
1399 4446 3.494254 TGGCGGTGGTTTGGGACT 61.494 61.111 0.00 0.00 0.00 3.85
1400 4447 2.671963 GGCGGTGGTTTGGGACTC 60.672 66.667 0.00 0.00 0.00 3.36
1512 4559 3.436704 TGGAATTCACTCGATTCTTGTGC 59.563 43.478 7.93 0.00 0.00 4.57
1685 4897 3.806316 ATTTAGTAGTGCGTGTGTTGC 57.194 42.857 0.00 0.00 0.00 4.17
1727 4939 2.719739 CAGATGGTTGCTGGAGTGATT 58.280 47.619 0.00 0.00 0.00 2.57
1755 4967 5.527951 GTGCAGACCACACATTAATTTTGA 58.472 37.500 0.00 0.00 44.06 2.69
1777 4989 9.874205 TTTGATAAAGCTAAATAAAGCATGCTT 57.126 25.926 27.21 27.21 45.30 3.91
1788 5000 3.683055 CATGCTTGCAATTCGGCG 58.317 55.556 0.00 0.00 36.28 6.46
1869 5081 6.418946 TGGTTGGCACTAAAAGGAAATTTTT 58.581 32.000 0.00 0.00 41.40 1.94
1957 5169 4.922791 GCAACGAGCCAACAACTC 57.077 55.556 0.00 0.00 37.23 3.01
1980 5192 4.449068 CGGACACCTACTAAATCATGATGC 59.551 45.833 9.46 0.00 0.00 3.91
1983 5195 6.239217 ACACCTACTAAATCATGATGCAGA 57.761 37.500 18.88 2.45 0.00 4.26
2048 5263 6.372659 AGTTTTCTCTGGTGCAGTATAACATG 59.627 38.462 0.00 0.00 32.61 3.21
2050 5265 2.874701 CTCTGGTGCAGTATAACATGCC 59.125 50.000 0.00 0.00 41.85 4.40
2068 5315 1.936547 GCCGATACTTGAGCCTTTCTG 59.063 52.381 0.00 0.00 0.00 3.02
2077 5324 2.507484 TGAGCCTTTCTGGACATGTTG 58.493 47.619 0.00 0.00 38.35 3.33
2083 5330 4.261994 GCCTTTCTGGACATGTTGCTTTTA 60.262 41.667 0.00 0.00 38.35 1.52
2119 5369 7.653311 AGACTAATCTGAATTGTTTTGGTTTGC 59.347 33.333 0.00 0.00 32.29 3.68
2150 5400 8.842280 ACAATTGCATTCTTTCATTTGTTTCAT 58.158 25.926 5.05 0.00 34.88 2.57
2152 5402 8.610248 ATTGCATTCTTTCATTTGTTTCATGA 57.390 26.923 0.00 0.00 0.00 3.07
2153 5403 8.434733 TTGCATTCTTTCATTTGTTTCATGAA 57.565 26.923 3.38 3.38 38.59 2.57
2154 5404 8.610248 TGCATTCTTTCATTTGTTTCATGAAT 57.390 26.923 9.40 0.00 39.76 2.57
2179 5429 9.860898 ATATTAAGACCTCAATTTTGTTCTTGC 57.139 29.630 11.44 0.00 30.94 4.01
2387 5637 3.897141 TGTACACCTCAACACAAGTGA 57.103 42.857 7.28 0.00 34.33 3.41
2424 5674 4.328536 TGTTTTTCTGCTTATCGCCCTTA 58.671 39.130 0.00 0.00 38.05 2.69
2449 5699 1.478916 TCTGCATGCCAATTGTGATGG 59.521 47.619 16.68 0.00 41.08 3.51
2457 5707 3.894427 TGCCAATTGTGATGGTAGTTGTT 59.106 39.130 4.43 0.00 40.23 2.83
2485 5736 6.134535 TCTTTCCTGCTTATAAAGGTTGGA 57.865 37.500 3.62 0.00 34.94 3.53
2504 5755 2.639065 GAGTTGGTTGTGAGTTCACCA 58.361 47.619 9.60 0.00 45.88 4.17
2633 5884 2.930040 GTTGCTCGGATTTGATCTTCGA 59.070 45.455 0.00 0.00 0.00 3.71
2651 5902 5.422331 TCTTCGAGGTGAAAACCTATGATCT 59.578 40.000 0.00 0.00 40.86 2.75
2663 5914 3.133721 ACCTATGATCTGACCTTCAGTGC 59.866 47.826 3.19 0.00 44.58 4.40
2680 5931 2.436646 CTTGAATCCGGCAGCGGT 60.437 61.111 0.00 0.00 0.00 5.68
2682 5933 3.247056 TTGAATCCGGCAGCGGTGA 62.247 57.895 20.69 0.00 0.00 4.02
2730 5981 2.870411 GCGTTGTTGTTGAAGTAGACCT 59.130 45.455 0.00 0.00 0.00 3.85
2737 5988 5.781306 TGTTGTTGAAGTAGACCTGGGTATA 59.219 40.000 0.00 0.00 0.00 1.47
2769 6020 1.145803 GACGACCCGACCTGAAAAAG 58.854 55.000 0.00 0.00 0.00 2.27
2800 6051 0.770499 TGGGTCAGGCTTGTCAATCA 59.230 50.000 0.00 0.00 0.00 2.57
2827 6078 2.182537 CGGGCATCCTTTTGCAGC 59.817 61.111 0.00 0.00 44.59 5.25
2853 6105 0.680061 GGTAGTTAGGGATGGGCTCG 59.320 60.000 0.00 0.00 0.00 5.03
2861 6113 2.592308 GATGGGCTCGGGCTTCTT 59.408 61.111 7.48 0.00 38.73 2.52
2888 6198 1.821216 TTGGGCTCGGATTTGACTTC 58.179 50.000 0.00 0.00 0.00 3.01
2931 6241 1.069935 GAGGATAGTTCGGGCTGGC 59.930 63.158 0.00 0.00 0.00 4.85
2943 6253 0.686789 GGGCTGGCATTTTGAAGGTT 59.313 50.000 2.88 0.00 0.00 3.50
2949 6259 1.072173 GGCATTTTGAAGGTTGGGCTT 59.928 47.619 0.00 0.00 0.00 4.35
2964 6274 3.284336 CTTTTACAAGCCCGGCCC 58.716 61.111 5.55 0.00 0.00 5.80
2981 6291 0.606401 CCCGACACATGCTCAGGTTT 60.606 55.000 0.00 0.00 0.00 3.27
3039 6351 2.636768 GCAGTAATTGGTGTTGCCTC 57.363 50.000 0.00 0.00 38.35 4.70
3040 6352 1.202348 GCAGTAATTGGTGTTGCCTCC 59.798 52.381 0.00 0.00 38.35 4.30
3042 6354 3.157087 CAGTAATTGGTGTTGCCTCCTT 58.843 45.455 0.00 0.00 38.35 3.36
3043 6355 3.573967 CAGTAATTGGTGTTGCCTCCTTT 59.426 43.478 0.00 0.00 38.35 3.11
3044 6356 4.764823 CAGTAATTGGTGTTGCCTCCTTTA 59.235 41.667 0.00 0.00 38.35 1.85
3045 6357 5.418840 CAGTAATTGGTGTTGCCTCCTTTAT 59.581 40.000 0.00 0.00 38.35 1.40
3070 6521 2.303163 AAAAAGGTTGTTCAACGCCC 57.697 45.000 9.15 0.00 0.00 6.13
3074 6525 4.676586 GTTGTTCAACGCCCGCCG 62.677 66.667 0.00 0.00 44.21 6.46
3084 6536 4.817936 GCCCGCCGCATGCAAATT 62.818 61.111 19.57 0.00 41.33 1.82
3086 6538 2.166579 CCCGCCGCATGCAAATTTC 61.167 57.895 19.57 0.00 41.33 2.17
3099 6551 6.020360 GCATGCAAATTTCTCCTCGTATTTTC 60.020 38.462 14.21 0.00 0.00 2.29
3132 6585 1.151777 CCATGAACCGCGCGATAGTT 61.152 55.000 34.63 26.38 39.35 2.24
3133 6586 0.043053 CATGAACCGCGCGATAGTTG 60.043 55.000 34.63 18.67 39.35 3.16
3138 6591 2.317689 CGCGCGATAGTTGCACAG 59.682 61.111 28.94 0.00 39.12 3.66
3184 6638 3.515602 AAGCTGATGGTCCAACTTCTT 57.484 42.857 0.00 0.00 0.00 2.52
3185 6639 2.787994 AGCTGATGGTCCAACTTCTTG 58.212 47.619 0.00 0.00 0.00 3.02
3243 6700 9.051408 GCATTGTGCTGATGTTCCAATAAATGG 62.051 40.741 0.00 0.00 45.10 3.16
3263 6722 1.268999 GGAGATAGCTCGCTCTGTGTG 60.269 57.143 13.53 0.00 42.25 3.82
3264 6723 1.403679 GAGATAGCTCGCTCTGTGTGT 59.596 52.381 8.16 0.00 0.00 3.72
3276 6735 6.337356 TCGCTCTGTGTGTTAATCATATTCA 58.663 36.000 0.00 0.00 0.00 2.57
3305 6765 8.862325 ATACTCTTGATTGTTTGGTTATCACA 57.138 30.769 0.00 0.00 0.00 3.58
3306 6766 6.970484 ACTCTTGATTGTTTGGTTATCACAC 58.030 36.000 0.00 0.00 0.00 3.82
3307 6767 6.016276 ACTCTTGATTGTTTGGTTATCACACC 60.016 38.462 0.00 0.00 37.34 4.16
3308 6768 4.757799 TGATTGTTTGGTTATCACACCG 57.242 40.909 0.00 0.00 40.09 4.94
3309 6769 3.057876 TGATTGTTTGGTTATCACACCGC 60.058 43.478 0.00 0.00 40.09 5.68
3310 6770 2.264005 TGTTTGGTTATCACACCGCT 57.736 45.000 0.00 0.00 40.09 5.52
3312 6772 3.331150 TGTTTGGTTATCACACCGCTAG 58.669 45.455 0.00 0.00 40.09 3.42
3316 6872 2.300723 TGGTTATCACACCGCTAGTTGT 59.699 45.455 0.00 0.00 40.09 3.32
3318 6874 3.749609 GGTTATCACACCGCTAGTTGTTT 59.250 43.478 0.00 0.00 0.00 2.83
3323 6879 2.353269 CACACCGCTAGTTGTTTGTTGA 59.647 45.455 0.00 0.00 0.00 3.18
3325 6881 1.595794 ACCGCTAGTTGTTTGTTGACG 59.404 47.619 0.00 0.00 0.00 4.35
3340 6896 4.489810 TGTTGACGCTTGACACAAAAATT 58.510 34.783 0.00 0.00 0.00 1.82
3370 6926 6.183360 GGTTTGTTTTGGTATCTATCTCAGGC 60.183 42.308 0.00 0.00 0.00 4.85
3427 6983 5.197451 ACATCTTCCCATAACGCCATAAAA 58.803 37.500 0.00 0.00 0.00 1.52
3473 7029 8.849168 CATGGTTGTAAATTCTTATCATAGCCA 58.151 33.333 0.00 0.00 0.00 4.75
3506 7062 2.322543 ACTTATCTCCTCCCCCTCCTTT 59.677 50.000 0.00 0.00 0.00 3.11
3540 7096 5.649557 CAAACAAGTGGAGACAAATGACAA 58.350 37.500 0.00 0.00 46.06 3.18
3604 7160 5.395325 CGATAGTGCATTTTCAGGTACAG 57.605 43.478 0.00 0.00 0.00 2.74
3608 7164 5.941948 AGTGCATTTTCAGGTACAGTTAC 57.058 39.130 0.00 0.00 0.00 2.50
3623 7179 7.823665 GGTACAGTTACCTTCCCATTTTTAAG 58.176 38.462 0.00 0.00 44.24 1.85
3624 7180 7.666804 GGTACAGTTACCTTCCCATTTTTAAGA 59.333 37.037 0.00 0.00 44.24 2.10
3625 7181 9.239551 GTACAGTTACCTTCCCATTTTTAAGAT 57.760 33.333 0.00 0.00 0.00 2.40
3627 7183 9.990868 ACAGTTACCTTCCCATTTTTAAGATAT 57.009 29.630 0.00 0.00 0.00 1.63
3634 7190 9.264719 CCTTCCCATTTTTAAGATATTTGATGC 57.735 33.333 0.00 0.00 0.00 3.91
3741 7297 7.723324 TGTTACCCACTATAGTTAGCTCAATC 58.277 38.462 1.56 0.00 0.00 2.67
3780 7336 6.449698 AGGAAAATTATGTGCACTCAAACTG 58.550 36.000 19.41 0.00 0.00 3.16
3786 7342 1.451207 TGCACTCAAACTGCGTGGT 60.451 52.632 0.00 0.00 33.97 4.16
3800 7356 6.139048 ACTGCGTGGTATGTTTTACTTTTT 57.861 33.333 0.00 0.00 0.00 1.94
3802 7358 6.132791 TGCGTGGTATGTTTTACTTTTTGA 57.867 33.333 0.00 0.00 0.00 2.69
3803 7359 6.561614 TGCGTGGTATGTTTTACTTTTTGAA 58.438 32.000 0.00 0.00 0.00 2.69
3804 7360 6.472808 TGCGTGGTATGTTTTACTTTTTGAAC 59.527 34.615 0.00 0.00 0.00 3.18
3843 7399 4.054359 ACCTGTTAATATGGTTGCCCAA 57.946 40.909 0.00 0.00 46.04 4.12
3864 7420 7.417612 CCCAAAGTTACTACATCATAATGCAC 58.582 38.462 0.00 0.00 36.26 4.57
3891 7447 8.870116 TGCATTGTTACTCCTCATATGTAGTAT 58.130 33.333 1.90 0.00 0.00 2.12
3941 7497 9.781633 TTGTTTACCTTTACTAGTGCAAAGATA 57.218 29.630 16.47 4.37 34.35 1.98
3942 7498 9.953565 TGTTTACCTTTACTAGTGCAAAGATAT 57.046 29.630 16.47 7.04 34.35 1.63
3959 7515 7.201741 GCAAAGATATTTTACTGTTCCCTCTCC 60.202 40.741 0.00 0.00 0.00 3.71
3982 7538 6.014499 TCCGTCCTTTCTTCTCTTATGTCTTT 60.014 38.462 0.00 0.00 0.00 2.52
3999 7555 5.418676 TGTCTTTGGCTCCAAAAAGAAAAG 58.581 37.500 14.28 2.44 44.07 2.27
4000 7556 4.811024 GTCTTTGGCTCCAAAAAGAAAAGG 59.189 41.667 14.28 2.05 44.07 3.11
4018 7574 6.432472 AGAAAAGGAAGTATGAGGAAAGCTTG 59.568 38.462 0.00 0.00 0.00 4.01
4058 7614 0.317160 TAACTGGTGACTGCCTGACG 59.683 55.000 0.00 0.00 0.00 4.35
4067 7623 1.661112 GACTGCCTGACGTATTCAAGC 59.339 52.381 0.00 0.00 41.50 4.01
4150 7706 4.400529 AGCTTTGACCGGTTTTGATTTT 57.599 36.364 9.42 0.00 0.00 1.82
4178 7734 6.715280 AGGTGAAGCTTCTAATCTTCATTCA 58.285 36.000 26.09 0.00 46.86 2.57
4236 7792 1.270518 ACAGTGAGTGCAGGTCATGTC 60.271 52.381 0.00 0.00 0.00 3.06
4241 7797 3.372206 GTGAGTGCAGGTCATGTCATAAC 59.628 47.826 2.11 0.00 0.00 1.89
4243 7799 3.866651 AGTGCAGGTCATGTCATAACTC 58.133 45.455 0.00 0.00 0.00 3.01
4244 7800 3.261643 AGTGCAGGTCATGTCATAACTCA 59.738 43.478 0.00 0.00 0.00 3.41
4246 7802 5.129320 AGTGCAGGTCATGTCATAACTCATA 59.871 40.000 0.00 0.00 0.00 2.15
4247 7803 5.817296 GTGCAGGTCATGTCATAACTCATAA 59.183 40.000 0.00 0.00 0.00 1.90
4248 7804 6.018425 GTGCAGGTCATGTCATAACTCATAAG 60.018 42.308 0.00 0.00 0.00 1.73
4251 7807 7.466455 GCAGGTCATGTCATAACTCATAAGTTG 60.466 40.741 0.00 0.00 45.37 3.16
4252 7808 7.765819 CAGGTCATGTCATAACTCATAAGTTGA 59.234 37.037 0.00 0.00 45.37 3.18
4297 7853 7.175641 AGCTGTAGTTTCATTTCTGCAATTAGT 59.824 33.333 0.00 0.00 0.00 2.24
4300 7856 6.029346 AGTTTCATTTCTGCAATTAGTGGG 57.971 37.500 0.00 0.00 0.00 4.61
4379 7935 3.697799 TGAGCATCCTCACTCCTCA 57.302 52.632 0.00 0.00 42.98 3.86
4400 7956 1.048160 TGGCCGGCTCTGTCATATGA 61.048 55.000 28.56 0.00 0.00 2.15
4446 8002 4.698780 AGGTTATTTTAGCAAGGTTCGGTC 59.301 41.667 0.00 0.00 0.00 4.79
4463 8019 6.371825 GGTTCGGTCAGATTATTCATATTCCC 59.628 42.308 0.00 0.00 0.00 3.97
4486 8042 4.543590 TTTCTTTTTGGCAGGTTGAACA 57.456 36.364 0.00 0.00 0.00 3.18
4566 8122 7.038231 ACCTACTAAAAGTCCTTGAATGCTACT 60.038 37.037 0.00 0.00 0.00 2.57
4567 8123 7.492994 CCTACTAAAAGTCCTTGAATGCTACTC 59.507 40.741 0.00 0.00 0.00 2.59
4568 8124 6.174049 ACTAAAAGTCCTTGAATGCTACTCC 58.826 40.000 0.00 0.00 0.00 3.85
4569 8125 3.636153 AAGTCCTTGAATGCTACTCCC 57.364 47.619 0.00 0.00 0.00 4.30
4570 8126 2.839228 AGTCCTTGAATGCTACTCCCT 58.161 47.619 0.00 0.00 0.00 4.20
4571 8127 2.769095 AGTCCTTGAATGCTACTCCCTC 59.231 50.000 0.00 0.00 0.00 4.30
4572 8128 2.119495 TCCTTGAATGCTACTCCCTCC 58.881 52.381 0.00 0.00 0.00 4.30
4573 8129 1.202580 CCTTGAATGCTACTCCCTCCG 60.203 57.143 0.00 0.00 0.00 4.63
4574 8130 1.482593 CTTGAATGCTACTCCCTCCGT 59.517 52.381 0.00 0.00 0.00 4.69
4575 8131 1.112113 TGAATGCTACTCCCTCCGTC 58.888 55.000 0.00 0.00 0.00 4.79
4576 8132 0.389757 GAATGCTACTCCCTCCGTCC 59.610 60.000 0.00 0.00 0.00 4.79
4577 8133 0.032017 AATGCTACTCCCTCCGTCCT 60.032 55.000 0.00 0.00 0.00 3.85
4578 8134 0.851469 ATGCTACTCCCTCCGTCCTA 59.149 55.000 0.00 0.00 0.00 2.94
4579 8135 0.627451 TGCTACTCCCTCCGTCCTAA 59.373 55.000 0.00 0.00 0.00 2.69
4580 8136 1.006281 TGCTACTCCCTCCGTCCTAAA 59.994 52.381 0.00 0.00 0.00 1.85
4581 8137 2.105766 GCTACTCCCTCCGTCCTAAAA 58.894 52.381 0.00 0.00 0.00 1.52
4582 8138 2.699321 GCTACTCCCTCCGTCCTAAAAT 59.301 50.000 0.00 0.00 0.00 1.82
4583 8139 3.893813 GCTACTCCCTCCGTCCTAAAATA 59.106 47.826 0.00 0.00 0.00 1.40
4584 8140 4.343239 GCTACTCCCTCCGTCCTAAAATAA 59.657 45.833 0.00 0.00 0.00 1.40
4585 8141 5.509332 GCTACTCCCTCCGTCCTAAAATAAG 60.509 48.000 0.00 0.00 0.00 1.73
4586 8142 4.359996 ACTCCCTCCGTCCTAAAATAAGT 58.640 43.478 0.00 0.00 0.00 2.24
4587 8143 4.161754 ACTCCCTCCGTCCTAAAATAAGTG 59.838 45.833 0.00 0.00 0.00 3.16
4588 8144 4.098894 TCCCTCCGTCCTAAAATAAGTGT 58.901 43.478 0.00 0.00 0.00 3.55
4589 8145 4.161001 TCCCTCCGTCCTAAAATAAGTGTC 59.839 45.833 0.00 0.00 0.00 3.67
4590 8146 4.161754 CCCTCCGTCCTAAAATAAGTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
4591 8147 5.349809 CCTCCGTCCTAAAATAAGTGTCTC 58.650 45.833 0.00 0.00 0.00 3.36
4592 8148 5.105473 CCTCCGTCCTAAAATAAGTGTCTCA 60.105 44.000 0.00 0.00 0.00 3.27
4593 8149 6.349243 TCCGTCCTAAAATAAGTGTCTCAA 57.651 37.500 0.00 0.00 0.00 3.02
4594 8150 6.161381 TCCGTCCTAAAATAAGTGTCTCAAC 58.839 40.000 0.00 0.00 0.00 3.18
4595 8151 6.014840 TCCGTCCTAAAATAAGTGTCTCAACT 60.015 38.462 0.00 0.00 0.00 3.16
4596 8152 6.649557 CCGTCCTAAAATAAGTGTCTCAACTT 59.350 38.462 0.00 0.00 42.89 2.66
4597 8153 7.172703 CCGTCCTAAAATAAGTGTCTCAACTTT 59.827 37.037 0.00 0.00 40.77 2.66
4598 8154 8.009974 CGTCCTAAAATAAGTGTCTCAACTTTG 58.990 37.037 0.00 0.00 40.77 2.77
4599 8155 8.837389 GTCCTAAAATAAGTGTCTCAACTTTGT 58.163 33.333 0.00 0.00 40.77 2.83
4608 8164 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
4609 8165 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
4610 8166 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
4611 8167 9.310716 GTGTCTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
4637 8193 7.971455 ACAAAGTTGTACTAAAGTTGAGACAC 58.029 34.615 0.00 0.00 40.16 3.67
4638 8194 7.822822 ACAAAGTTGTACTAAAGTTGAGACACT 59.177 33.333 0.00 0.00 40.16 3.55
4639 8195 8.665685 CAAAGTTGTACTAAAGTTGAGACACTT 58.334 33.333 0.00 0.00 38.74 3.16
4640 8196 9.880157 AAAGTTGTACTAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
4647 8203 8.974060 ACTAAAGTTGAGACACTTATTTTGGA 57.026 30.769 0.00 0.00 35.87 3.53
4648 8204 8.837389 ACTAAAGTTGAGACACTTATTTTGGAC 58.163 33.333 0.00 0.00 35.87 4.02
4649 8205 5.924475 AGTTGAGACACTTATTTTGGACG 57.076 39.130 0.00 0.00 0.00 4.79
4650 8206 4.755123 AGTTGAGACACTTATTTTGGACGG 59.245 41.667 0.00 0.00 0.00 4.79
4651 8207 4.610605 TGAGACACTTATTTTGGACGGA 57.389 40.909 0.00 0.00 0.00 4.69
4652 8208 4.566004 TGAGACACTTATTTTGGACGGAG 58.434 43.478 0.00 0.00 0.00 4.63
4653 8209 3.933332 GAGACACTTATTTTGGACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
4654 8210 3.007635 GACACTTATTTTGGACGGAGGG 58.992 50.000 0.00 0.00 0.00 4.30
4655 8211 2.640826 ACACTTATTTTGGACGGAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
4656 8212 3.270877 CACTTATTTTGGACGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
4657 8213 2.289565 CTTATTTTGGACGGAGGGAGC 58.710 52.381 0.00 0.00 0.00 4.70
4658 8214 0.177141 TATTTTGGACGGAGGGAGCG 59.823 55.000 0.00 0.00 0.00 5.03
4659 8215 2.536997 ATTTTGGACGGAGGGAGCGG 62.537 60.000 0.00 0.00 0.00 5.52
4660 8216 4.689549 TTGGACGGAGGGAGCGGA 62.690 66.667 0.00 0.00 0.00 5.54
4666 8222 4.467107 GGAGGGAGCGGAGGGAGT 62.467 72.222 0.00 0.00 0.00 3.85
4667 8223 2.601868 GAGGGAGCGGAGGGAGTA 59.398 66.667 0.00 0.00 0.00 2.59
4668 8224 1.829096 GAGGGAGCGGAGGGAGTAC 60.829 68.421 0.00 0.00 0.00 2.73
4731 8288 5.050499 GTCTTGCATTCTCGGATACATTCTG 60.050 44.000 0.00 0.00 0.00 3.02
4788 8345 6.019075 CGTCATTTTATTTCCATGAGCTCGTA 60.019 38.462 8.44 0.00 0.00 3.43
4789 8346 7.348201 GTCATTTTATTTCCATGAGCTCGTAG 58.652 38.462 8.44 0.68 0.00 3.51
4791 8348 7.552687 TCATTTTATTTCCATGAGCTCGTAGTT 59.447 33.333 8.44 0.00 0.00 2.24
4796 8353 2.628178 TCCATGAGCTCGTAGTTATGGG 59.372 50.000 21.90 12.52 36.57 4.00
4807 8371 2.555732 AGTTATGGGTCCGGTTCCTA 57.444 50.000 15.51 11.42 0.00 2.94
4812 8376 0.694196 TGGGTCCGGTTCCTAAAAGG 59.306 55.000 15.51 0.00 36.46 3.11
4814 8378 0.679002 GGTCCGGTTCCTAAAAGGCC 60.679 60.000 0.00 0.00 34.61 5.19
4876 8440 2.744318 CGCACCCGCACCAATGTA 60.744 61.111 0.00 0.00 38.40 2.29
4970 8534 6.623486 TGTTGCATTGGATTATCTTCAGTTG 58.377 36.000 0.00 0.00 0.00 3.16
5027 8591 6.425577 TGTATTTTACTAACGATGGTTGGC 57.574 37.500 3.01 0.00 38.10 4.52
5053 8617 9.257651 CGTTTTAGACATAGGTATTCCTTTAGG 57.742 37.037 0.00 0.00 42.12 2.69
5110 9039 7.778185 AATGGTAGAGTTACAGTCTGTAGTT 57.222 36.000 12.39 5.57 33.92 2.24
5167 9096 5.292101 GTGCATGAGTGTGTAGGAAGTTATC 59.708 44.000 0.00 0.00 0.00 1.75
5170 9099 3.119245 TGAGTGTGTAGGAAGTTATCGGC 60.119 47.826 0.00 0.00 0.00 5.54
5802 9743 1.139058 GACAATCTCATGGTAGCGGGT 59.861 52.381 0.00 0.00 0.00 5.28
5859 9800 2.289274 TCAAGACGCGCTGAATTTTCAA 59.711 40.909 5.73 0.00 36.64 2.69
6006 9950 4.021368 GTCTCCTAGGTAAGAACTGCACAA 60.021 45.833 9.08 0.00 0.00 3.33
6010 9954 5.705441 TCCTAGGTAAGAACTGCACAATTTG 59.295 40.000 9.08 0.00 0.00 2.32
6013 9957 4.649218 AGGTAAGAACTGCACAATTTGGTT 59.351 37.500 0.78 0.00 0.00 3.67
6058 10002 4.141824 TGGGCAATACGTGATCAACTATCA 60.142 41.667 0.00 0.00 42.48 2.15
6139 10083 3.676646 GCACTGTCAAATTTCTTGATGCC 59.323 43.478 0.00 0.00 30.12 4.40
6201 10145 3.055167 TCGGTCAATGTGAGTGAATCCAT 60.055 43.478 0.00 0.00 0.00 3.41
6209 10153 2.170187 GTGAGTGAATCCATGCTCCTCT 59.830 50.000 0.00 0.00 0.00 3.69
6212 10156 2.158986 AGTGAATCCATGCTCCTCTTCG 60.159 50.000 0.00 0.00 0.00 3.79
6216 10160 2.088104 TCCATGCTCCTCTTCGGTAT 57.912 50.000 0.00 0.00 0.00 2.73
6219 10163 2.548920 CCATGCTCCTCTTCGGTATTCC 60.549 54.545 0.00 0.00 0.00 3.01
6221 10165 2.467880 TGCTCCTCTTCGGTATTCCTT 58.532 47.619 0.00 0.00 0.00 3.36
6222 10166 2.168521 TGCTCCTCTTCGGTATTCCTTG 59.831 50.000 0.00 0.00 0.00 3.61
6229 10173 5.221087 CCTCTTCGGTATTCCTTGACTCTAC 60.221 48.000 0.00 0.00 0.00 2.59
6230 10174 4.643784 TCTTCGGTATTCCTTGACTCTACC 59.356 45.833 0.00 0.00 0.00 3.18
6231 10175 4.246712 TCGGTATTCCTTGACTCTACCT 57.753 45.455 0.00 0.00 31.59 3.08
6233 10177 4.643784 TCGGTATTCCTTGACTCTACCTTC 59.356 45.833 0.00 0.00 31.59 3.46
6238 10183 0.175989 CTTGACTCTACCTTCGCCCC 59.824 60.000 0.00 0.00 0.00 5.80
6240 10185 1.751927 GACTCTACCTTCGCCCCGA 60.752 63.158 0.00 0.00 0.00 5.14
6241 10186 2.002509 GACTCTACCTTCGCCCCGAC 62.003 65.000 0.00 0.00 34.89 4.79
6244 10189 3.718210 CTACCTTCGCCCCGACAGC 62.718 68.421 0.00 0.00 34.89 4.40
6263 10208 6.432607 ACAGCTGAATCATAAGTTGTCATG 57.567 37.500 23.35 0.00 33.17 3.07
6264 10209 5.356190 ACAGCTGAATCATAAGTTGTCATGG 59.644 40.000 23.35 0.00 33.17 3.66
6265 10210 4.885907 AGCTGAATCATAAGTTGTCATGGG 59.114 41.667 0.00 0.00 0.00 4.00
6266 10211 4.883585 GCTGAATCATAAGTTGTCATGGGA 59.116 41.667 0.00 0.00 0.00 4.37
6267 10212 5.533903 GCTGAATCATAAGTTGTCATGGGAT 59.466 40.000 0.00 0.00 0.00 3.85
6268 10213 6.293845 GCTGAATCATAAGTTGTCATGGGATC 60.294 42.308 0.00 0.00 0.00 3.36
6269 10214 6.661777 TGAATCATAAGTTGTCATGGGATCA 58.338 36.000 0.00 0.00 0.00 2.92
6270 10215 7.292319 TGAATCATAAGTTGTCATGGGATCAT 58.708 34.615 0.00 0.00 0.00 2.45
6314 10259 0.463474 GTCCTGATGGCAAGCTCCTC 60.463 60.000 0.00 0.00 0.00 3.71
6348 10293 2.181777 GCTCCGACTGCGTGATCA 59.818 61.111 0.00 0.00 35.23 2.92
6419 10366 0.636647 AATCCCCCTTCATTCCACCC 59.363 55.000 0.00 0.00 0.00 4.61
6420 10367 0.254299 ATCCCCCTTCATTCCACCCT 60.254 55.000 0.00 0.00 0.00 4.34
6425 10372 1.318158 CCTTCATTCCACCCTGCAGC 61.318 60.000 8.66 0.00 0.00 5.25
6617 10564 2.283809 CTGGGAGGGAGGATCGGT 59.716 66.667 0.00 0.00 34.37 4.69
6894 10841 3.914984 AGTGGAACAGTCATGTCGG 57.085 52.632 0.00 0.00 37.51 4.79
6898 10845 2.740714 GAACAGTCATGTCGGCCGC 61.741 63.158 23.51 16.75 39.29 6.53
6956 10915 2.969821 TATGGCAAGTGGTGGTTTCT 57.030 45.000 0.00 0.00 0.00 2.52
6981 10943 2.665649 TATGCGGAGTGGTACAAGTG 57.334 50.000 0.00 0.00 44.16 3.16
7086 13048 1.610038 TGGTTCGCGTGAGAAGAGTTA 59.390 47.619 5.77 0.00 0.00 2.24
7103 13065 6.793492 AGAGTTAAGTCTTTTGATGACTGC 57.207 37.500 7.02 0.00 43.16 4.40
7214 13507 0.401356 TTGCATGCAAGGAGGTCTGA 59.599 50.000 28.80 2.84 0.00 3.27
7222 13515 2.494870 GCAAGGAGGTCTGATTTGCATT 59.505 45.455 2.93 0.00 42.63 3.56
7250 13543 0.038310 ACTTAAAGCACCCCAGAGCC 59.962 55.000 0.00 0.00 0.00 4.70
7256 13549 3.655211 CACCCCAGAGCCTGCCTT 61.655 66.667 0.00 0.00 0.00 4.35
7267 13560 3.741476 CTGCCTTGCTGGGAACGC 61.741 66.667 0.00 0.00 35.09 4.84
7278 13571 2.761195 GGGAACGCTTGAATCGGCC 61.761 63.158 0.00 0.00 0.00 6.13
7284 13577 1.635663 CGCTTGAATCGGCCGTTTCT 61.636 55.000 36.00 17.83 0.00 2.52
7286 13579 1.735571 GCTTGAATCGGCCGTTTCTAA 59.264 47.619 36.00 28.13 0.00 2.10
7304 13597 4.299155 TCTAACGAGACAGACTGCAAAAG 58.701 43.478 1.25 0.00 0.00 2.27
7316 13609 0.394488 TGCAAAAGTTGGTCCCGACA 60.394 50.000 6.48 0.00 32.91 4.35
7364 13658 5.947228 AACGCCTGATATCATATTGGTTG 57.053 39.130 5.72 4.14 0.00 3.77
7365 13659 4.973168 ACGCCTGATATCATATTGGTTGT 58.027 39.130 5.72 4.72 0.00 3.32
7618 14453 8.865590 TGTATTTTTGCTCTCTTTTAAACCAC 57.134 30.769 0.00 0.00 0.00 4.16
7625 14460 2.545106 TCTCTTTTAAACCACGAACCGC 59.455 45.455 0.00 0.00 0.00 5.68
7913 15320 1.816835 ACGAGAAAGATGTGACGCCTA 59.183 47.619 0.00 0.00 0.00 3.93
7965 15374 2.468532 GTTTGACAACGAAGTGTGGG 57.531 50.000 0.00 0.00 45.00 4.61
8024 16740 7.512992 ACAAGGATCTGAAGAAGAAGAAGAAA 58.487 34.615 0.00 0.00 38.79 2.52
8134 18512 5.311913 AGAAAAAGAAGAGGAAGAGGATGGT 59.688 40.000 0.00 0.00 0.00 3.55
8407 18822 2.573462 TGCTTTCTTGATGTAGGGAGCT 59.427 45.455 0.00 0.00 0.00 4.09
8408 18823 3.202097 GCTTTCTTGATGTAGGGAGCTC 58.798 50.000 4.71 4.71 0.00 4.09
8487 18903 9.042008 TCTAAACAGATTCAACTGAACAAGTAC 57.958 33.333 0.00 0.00 38.56 2.73
8546 18963 3.222603 CCCTTGGCAACTACAGTTCTTT 58.777 45.455 0.00 0.00 35.83 2.52
8547 18964 3.636764 CCCTTGGCAACTACAGTTCTTTT 59.363 43.478 0.00 0.00 35.83 2.27
8592 19009 2.650778 GGCTGCTTTGGTTTCCCG 59.349 61.111 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
176 187 4.738124 TGTTTTCAAACAAATGCTCGTGA 58.262 34.783 2.53 0.00 45.17 4.35
188 199 4.864247 ACTGTTCATGCACTGTTTTCAAAC 59.136 37.500 2.30 0.00 39.33 2.93
189 200 5.070770 ACTGTTCATGCACTGTTTTCAAA 57.929 34.783 2.30 0.00 0.00 2.69
190 201 4.439974 GGACTGTTCATGCACTGTTTTCAA 60.440 41.667 9.19 0.00 0.00 2.69
191 202 3.066621 GGACTGTTCATGCACTGTTTTCA 59.933 43.478 9.19 0.00 0.00 2.69
192 203 3.316308 AGGACTGTTCATGCACTGTTTTC 59.684 43.478 9.19 3.78 0.00 2.29
199 210 4.537015 GTTGTAAAGGACTGTTCATGCAC 58.463 43.478 0.00 0.00 0.00 4.57
210 221 0.872388 CACGCCTGGTTGTAAAGGAC 59.128 55.000 0.00 0.00 35.40 3.85
222 233 0.592637 TGCATGTTTCTTCACGCCTG 59.407 50.000 0.00 0.00 0.00 4.85
258 269 1.729881 GCATAAAGCAAGGGCCTCG 59.270 57.895 6.46 0.00 44.79 4.63
270 281 6.389091 CATTTGCAGACTTTGTAGGCATAAA 58.611 36.000 0.00 0.00 34.03 1.40
287 298 1.742831 GTATGGAAGGTCGCATTTGCA 59.257 47.619 3.13 0.00 42.21 4.08
291 302 4.415881 TGTATGTATGGAAGGTCGCATT 57.584 40.909 0.00 0.00 0.00 3.56
294 305 3.527533 TGTTGTATGTATGGAAGGTCGC 58.472 45.455 0.00 0.00 0.00 5.19
296 307 6.170506 TGAGTTGTTGTATGTATGGAAGGTC 58.829 40.000 0.00 0.00 0.00 3.85
298 309 7.050377 AGATGAGTTGTTGTATGTATGGAAGG 58.950 38.462 0.00 0.00 0.00 3.46
303 314 7.848223 TGGAAGATGAGTTGTTGTATGTATG 57.152 36.000 0.00 0.00 0.00 2.39
306 317 6.475504 TGATGGAAGATGAGTTGTTGTATGT 58.524 36.000 0.00 0.00 0.00 2.29
323 334 6.874278 ATATTGGGATACTCGATGATGGAA 57.126 37.500 0.00 0.00 0.00 3.53
325 336 6.314648 CACAATATTGGGATACTCGATGATGG 59.685 42.308 19.37 0.00 31.80 3.51
344 355 7.868922 TCGTTGTTTTCTAGAGTAAGCACAATA 59.131 33.333 0.00 0.00 0.00 1.90
410 421 1.414919 GTGAACACCACACCCTACAGA 59.585 52.381 0.00 0.00 45.03 3.41
440 451 1.001248 CCTCTTCCCCCTACCGACA 59.999 63.158 0.00 0.00 0.00 4.35
523 534 1.760086 CGGACCTCTGCATCCCTCT 60.760 63.158 0.00 0.00 0.00 3.69
563 574 2.926779 TCTGCTGCTGCACCTCCT 60.927 61.111 14.93 0.00 45.31 3.69
564 575 2.745492 GTCTGCTGCTGCACCTCC 60.745 66.667 14.93 0.00 45.31 4.30
575 586 0.605589 CACCTTCCTTCTCGTCTGCT 59.394 55.000 0.00 0.00 0.00 4.24
578 589 1.587054 CGCACCTTCCTTCTCGTCT 59.413 57.895 0.00 0.00 0.00 4.18
596 607 6.350194 CCTTACTTTCCCTTTACTTTGCATCC 60.350 42.308 0.00 0.00 0.00 3.51
612 623 0.611714 TCCACTCCGCCCTTACTTTC 59.388 55.000 0.00 0.00 0.00 2.62
613 624 1.003233 CTTCCACTCCGCCCTTACTTT 59.997 52.381 0.00 0.00 0.00 2.66
618 629 1.423794 TTTCCTTCCACTCCGCCCTT 61.424 55.000 0.00 0.00 0.00 3.95
645 657 0.684479 GCCCACTCAAATCCCCTTCC 60.684 60.000 0.00 0.00 0.00 3.46
689 701 4.778415 CGAGTGTCCAGACCGCCG 62.778 72.222 0.00 0.00 0.00 6.46
696 708 0.171455 GGTGCTCTACGAGTGTCCAG 59.829 60.000 0.00 0.00 31.39 3.86
697 709 1.248785 GGGTGCTCTACGAGTGTCCA 61.249 60.000 0.00 0.00 31.39 4.02
704 716 1.909781 AAACGGGGGTGCTCTACGA 60.910 57.895 0.00 0.00 0.00 3.43
706 718 0.953960 CACAAACGGGGGTGCTCTAC 60.954 60.000 0.00 0.00 0.00 2.59
707 719 1.373435 CACAAACGGGGGTGCTCTA 59.627 57.895 0.00 0.00 0.00 2.43
710 722 2.203294 GACACAAACGGGGGTGCT 60.203 61.111 3.01 0.00 38.57 4.40
711 723 3.292159 GGACACAAACGGGGGTGC 61.292 66.667 3.01 0.00 38.57 5.01
718 730 1.652930 CGCAAACCGGACACAAACG 60.653 57.895 9.46 0.00 0.00 3.60
739 751 0.251916 TCAGCCCGATTGTCCGAATT 59.748 50.000 0.00 0.00 0.00 2.17
750 762 0.673985 CGTTCTATGGATCAGCCCGA 59.326 55.000 0.00 0.00 34.97 5.14
754 766 4.250116 ACTCATCGTTCTATGGATCAGC 57.750 45.455 0.00 0.00 0.00 4.26
758 770 4.893524 TGTGGTACTCATCGTTCTATGGAT 59.106 41.667 0.00 0.00 0.00 3.41
762 774 5.362717 TCCAATGTGGTACTCATCGTTCTAT 59.637 40.000 0.00 0.00 42.08 1.98
763 775 4.707934 TCCAATGTGGTACTCATCGTTCTA 59.292 41.667 0.00 0.00 42.08 2.10
767 779 3.432186 CCATCCAATGTGGTACTCATCGT 60.432 47.826 0.00 0.00 42.08 3.73
771 783 1.632920 TGCCATCCAATGTGGTACTCA 59.367 47.619 0.00 0.00 39.03 3.41
773 785 2.897271 TTGCCATCCAATGTGGTACT 57.103 45.000 0.00 0.00 39.03 2.73
781 793 4.897076 TCTAGATGCAATTTGCCATCCAAT 59.103 37.500 18.27 4.26 44.23 3.16
789 801 3.488721 CCAGCTGTCTAGATGCAATTTGC 60.489 47.826 13.81 14.49 45.29 3.68
798 810 0.259065 TCCGGACCAGCTGTCTAGAT 59.741 55.000 13.81 0.00 43.89 1.98
802 814 3.374402 CGTCCGGACCAGCTGTCT 61.374 66.667 28.52 0.00 43.89 3.41
810 822 3.047877 CAAGCAACCGTCCGGACC 61.048 66.667 28.52 14.12 38.96 4.46
826 844 2.406002 GACGGGACCCTCAAAAGCCA 62.406 60.000 9.41 0.00 0.00 4.75
842 860 2.004583 TGTAAAGGGCATCTTCGACG 57.995 50.000 0.00 0.00 33.94 5.12
947 966 6.685527 TTTGCTGGGGTTTTTGTTTTTATC 57.314 33.333 0.00 0.00 0.00 1.75
948 967 7.363355 CCTTTTTGCTGGGGTTTTTGTTTTTAT 60.363 33.333 0.00 0.00 0.00 1.40
954 973 2.573915 TCCTTTTTGCTGGGGTTTTTGT 59.426 40.909 0.00 0.00 0.00 2.83
958 977 4.410555 TGTATTTCCTTTTTGCTGGGGTTT 59.589 37.500 0.00 0.00 0.00 3.27
959 978 3.970640 TGTATTTCCTTTTTGCTGGGGTT 59.029 39.130 0.00 0.00 0.00 4.11
966 985 4.668941 GCGCCATTTGTATTTCCTTTTTGC 60.669 41.667 0.00 0.00 0.00 3.68
973 4020 0.736053 TCCGCGCCATTTGTATTTCC 59.264 50.000 0.00 0.00 0.00 3.13
974 4021 1.400494 AGTCCGCGCCATTTGTATTTC 59.600 47.619 0.00 0.00 0.00 2.17
980 4027 1.647346 TAACTAGTCCGCGCCATTTG 58.353 50.000 0.00 0.00 0.00 2.32
992 4039 0.319405 AAGGCACCGCGTTAACTAGT 59.681 50.000 4.92 0.00 34.83 2.57
1045 4092 1.228154 GGTGGAAGTGGCGAAAGGT 60.228 57.895 0.00 0.00 0.00 3.50
1296 4343 0.111253 CAGCAAGACCAAACCCTCCT 59.889 55.000 0.00 0.00 0.00 3.69
1320 4367 1.839994 GAGGGAGGGATCACACATTCA 59.160 52.381 0.00 0.00 0.00 2.57
1365 4412 1.374758 CACTGAACCCAGACGAGCC 60.375 63.158 0.00 0.00 43.02 4.70
1380 4427 3.494254 TCCCAAACCACCGCCACT 61.494 61.111 0.00 0.00 0.00 4.00
1381 4428 3.292159 GTCCCAAACCACCGCCAC 61.292 66.667 0.00 0.00 0.00 5.01
1382 4429 3.485346 GAGTCCCAAACCACCGCCA 62.485 63.158 0.00 0.00 0.00 5.69
1393 4440 0.771127 CAAAACCTCCCAGAGTCCCA 59.229 55.000 0.00 0.00 0.00 4.37
1394 4441 0.038310 CCAAAACCTCCCAGAGTCCC 59.962 60.000 0.00 0.00 0.00 4.46
1395 4442 0.609406 GCCAAAACCTCCCAGAGTCC 60.609 60.000 0.00 0.00 0.00 3.85
1396 4443 0.609406 GGCCAAAACCTCCCAGAGTC 60.609 60.000 0.00 0.00 0.00 3.36
1397 4444 1.460699 GGCCAAAACCTCCCAGAGT 59.539 57.895 0.00 0.00 0.00 3.24
1398 4445 1.675641 CGGCCAAAACCTCCCAGAG 60.676 63.158 2.24 0.00 0.00 3.35
1399 4446 2.434331 CGGCCAAAACCTCCCAGA 59.566 61.111 2.24 0.00 0.00 3.86
1400 4447 2.676471 CCGGCCAAAACCTCCCAG 60.676 66.667 2.24 0.00 0.00 4.45
1629 4676 0.542805 TGGTTAACCATACCGGGCTC 59.457 55.000 23.69 0.00 42.01 4.70
1675 4887 1.658409 GGCTTGAAGCAACACACGC 60.658 57.895 19.89 0.00 44.75 5.34
1685 4897 3.181506 GCTTCCGTATTGAAGGCTTGAAG 60.182 47.826 3.46 10.47 41.65 3.02
1727 4939 2.248280 ATGTGTGGTCTGCACGTAAA 57.752 45.000 0.00 0.00 39.53 2.01
1775 4987 2.574212 GCGTCGCCGAATTGCAAG 60.574 61.111 5.75 0.00 35.63 4.01
1777 4989 1.362406 TATTGCGTCGCCGAATTGCA 61.362 50.000 15.88 5.92 35.63 4.08
1785 4997 0.317479 ATCCTACCTATTGCGTCGCC 59.683 55.000 15.88 0.00 0.00 5.54
1788 5000 6.565999 GCAAATGTTATCCTACCTATTGCGTC 60.566 42.308 0.00 0.00 32.48 5.19
1792 5004 9.683069 GATTTGCAAATGTTATCCTACCTATTG 57.317 33.333 28.67 0.00 0.00 1.90
1797 5009 7.992180 CAAGATTTGCAAATGTTATCCTACC 57.008 36.000 28.05 11.87 31.56 3.18
1957 5169 4.449068 GCATCATGATTTAGTAGGTGTCCG 59.551 45.833 5.16 0.00 0.00 4.79
1980 5192 3.442625 AGATGTCCATGTGCACATTTCTG 59.557 43.478 29.48 19.37 33.22 3.02
1983 5195 5.195185 TCATAGATGTCCATGTGCACATTT 58.805 37.500 29.48 8.57 33.22 2.32
2048 5263 1.936547 CAGAAAGGCTCAAGTATCGGC 59.063 52.381 0.00 0.00 0.00 5.54
2050 5265 3.190874 GTCCAGAAAGGCTCAAGTATCG 58.809 50.000 0.00 0.00 37.29 2.92
2096 5343 6.930722 AGGCAAACCAAAACAATTCAGATTAG 59.069 34.615 0.00 0.00 39.06 1.73
2099 5346 5.058490 CAGGCAAACCAAAACAATTCAGAT 58.942 37.500 0.00 0.00 39.06 2.90
2119 5369 7.041644 ACAAATGAAAGAATGCAATTGTTCAGG 60.042 33.333 7.40 5.00 39.06 3.86
2153 5403 9.860898 GCAAGAACAAAATTGAGGTCTTAATAT 57.139 29.630 9.58 0.00 31.39 1.28
2154 5404 9.077885 AGCAAGAACAAAATTGAGGTCTTAATA 57.922 29.630 9.58 0.00 31.39 0.98
2337 5587 3.459828 TCTCACCATATCAAACCCCTGA 58.540 45.455 0.00 0.00 0.00 3.86
2374 5624 3.793129 GCACCAATGTCACTTGTGTTGAG 60.793 47.826 0.46 0.00 0.00 3.02
2382 5632 2.034124 AGCTTTGCACCAATGTCACTT 58.966 42.857 0.00 0.00 0.00 3.16
2387 5637 2.985957 AAACAGCTTTGCACCAATGT 57.014 40.000 0.00 0.00 0.00 2.71
2432 5682 2.428171 ACTACCATCACAATTGGCATGC 59.572 45.455 9.90 9.90 37.81 4.06
2449 5699 7.674471 AAGCAGGAAAGAAGATAACAACTAC 57.326 36.000 0.00 0.00 0.00 2.73
2457 5707 9.396022 CAACCTTTATAAGCAGGAAAGAAGATA 57.604 33.333 9.74 0.00 32.94 1.98
2526 5777 9.221933 CAACTAAGGTTGTTGTTACCACATATA 57.778 33.333 0.00 0.00 45.42 0.86
2584 5835 0.625849 ATGCCTTCAGGAACGGGAAT 59.374 50.000 0.00 0.00 37.39 3.01
2680 5931 2.656007 GAACGACACACCGCGTCA 60.656 61.111 4.92 0.00 40.23 4.35
2682 5933 4.955774 GGGAACGACACACCGCGT 62.956 66.667 4.92 0.00 43.39 6.01
2730 5981 2.847234 CCGGGCTGCCTATACCCA 60.847 66.667 19.68 0.00 44.49 4.51
2805 6056 0.678048 GCAAAAGGATGCCCGAGTCT 60.678 55.000 0.00 0.00 40.49 3.24
2815 6066 0.967380 CTTCCGGGCTGCAAAAGGAT 60.967 55.000 0.00 0.00 0.00 3.24
2827 6078 1.692519 CATCCCTAACTACCTTCCGGG 59.307 57.143 0.00 0.00 41.89 5.73
2869 6121 1.821216 GAAGTCAAATCCGAGCCCAA 58.179 50.000 0.00 0.00 0.00 4.12
2870 6122 0.391130 CGAAGTCAAATCCGAGCCCA 60.391 55.000 0.00 0.00 0.00 5.36
2871 6123 1.090052 CCGAAGTCAAATCCGAGCCC 61.090 60.000 0.00 0.00 0.00 5.19
2872 6124 1.090052 CCCGAAGTCAAATCCGAGCC 61.090 60.000 0.00 0.00 0.00 4.70
2873 6125 1.706287 GCCCGAAGTCAAATCCGAGC 61.706 60.000 0.00 0.00 0.00 5.03
2874 6126 0.108138 AGCCCGAAGTCAAATCCGAG 60.108 55.000 0.00 0.00 0.00 4.63
2906 6216 3.118592 AGCCCGAACTATCCTCTTTTCTG 60.119 47.826 0.00 0.00 0.00 3.02
2931 6241 5.363939 TGTAAAAGCCCAACCTTCAAAATG 58.636 37.500 0.00 0.00 0.00 2.32
2949 6259 3.638316 TCGGGCCGGGCTTGTAAA 61.638 61.111 28.80 0.00 0.00 2.01
2964 6274 3.002791 ACATAAACCTGAGCATGTGTCG 58.997 45.455 0.00 0.00 30.64 4.35
2981 6291 3.258372 ACTGCGAGAGAGGTTTCAACATA 59.742 43.478 0.00 0.00 0.00 2.29
3057 6508 4.676586 CGGCGGGCGTTGAACAAC 62.677 66.667 16.48 7.51 37.92 3.32
3074 6525 2.927553 ACGAGGAGAAATTTGCATGC 57.072 45.000 11.82 11.82 0.00 4.06
3084 6536 3.695060 AGAGAGCGAAAATACGAGGAGAA 59.305 43.478 0.00 0.00 35.09 2.87
3086 6538 3.701532 AGAGAGCGAAAATACGAGGAG 57.298 47.619 0.00 0.00 35.09 3.69
3099 6551 4.669197 CGGTTCATGGTTTAAAAGAGAGCG 60.669 45.833 0.00 0.00 0.00 5.03
3155 6609 4.556697 TGGACCATCAGCTTAGGAGATTA 58.443 43.478 3.01 0.00 0.00 1.75
3243 6700 1.028905 ACACAGAGCGAGCTATCTCC 58.971 55.000 10.19 0.00 35.94 3.71
3301 6761 2.319136 ACAAACAACTAGCGGTGTGA 57.681 45.000 10.62 0.00 0.00 3.58
3302 6762 2.353269 TCAACAAACAACTAGCGGTGTG 59.647 45.455 0.00 3.60 0.00 3.82
3303 6763 2.353579 GTCAACAAACAACTAGCGGTGT 59.646 45.455 0.00 0.00 0.00 4.16
3304 6764 2.598907 CGTCAACAAACAACTAGCGGTG 60.599 50.000 0.00 0.00 0.00 4.94
3305 6765 1.595794 CGTCAACAAACAACTAGCGGT 59.404 47.619 0.00 0.00 0.00 5.68
3306 6766 1.659211 GCGTCAACAAACAACTAGCGG 60.659 52.381 0.00 0.00 0.00 5.52
3307 6767 1.260561 AGCGTCAACAAACAACTAGCG 59.739 47.619 0.00 0.00 0.00 4.26
3308 6768 3.035942 CAAGCGTCAACAAACAACTAGC 58.964 45.455 0.00 0.00 0.00 3.42
3309 6769 4.201773 TGTCAAGCGTCAACAAACAACTAG 60.202 41.667 0.00 0.00 0.00 2.57
3310 6770 3.685272 TGTCAAGCGTCAACAAACAACTA 59.315 39.130 0.00 0.00 0.00 2.24
3312 6772 2.592459 GTGTCAAGCGTCAACAAACAAC 59.408 45.455 0.00 0.00 0.00 3.32
3316 6872 3.560902 TTTGTGTCAAGCGTCAACAAA 57.439 38.095 0.00 0.00 0.00 2.83
3318 6874 3.560902 TTTTTGTGTCAAGCGTCAACA 57.439 38.095 0.00 0.00 0.00 3.33
3340 6896 7.458397 AGATAGATACCAAAACAAACCTGACA 58.542 34.615 0.00 0.00 0.00 3.58
3391 6947 4.176271 GGGAAGATGTATTGTTTGCTTGC 58.824 43.478 0.00 0.00 0.00 4.01
3447 7003 8.849168 TGGCTATGATAAGAATTTACAACCATG 58.151 33.333 0.00 0.00 0.00 3.66
3473 7029 6.408662 GGGAGGAGATAAGTCAAACAGCTAAT 60.409 42.308 0.00 0.00 0.00 1.73
3506 7062 3.135712 TCCACTTGTTTGCACTCCTAGAA 59.864 43.478 0.00 0.00 0.00 2.10
3540 7096 6.712095 TGTGTTGAAGCAGAAATCATAGAACT 59.288 34.615 0.00 0.00 0.00 3.01
3608 7164 9.264719 GCATCAAATATCTTAAAAATGGGAAGG 57.735 33.333 0.00 0.00 0.00 3.46
3627 7183 9.687210 GATTCTTATATCAATGCAAGCATCAAA 57.313 29.630 8.14 0.00 35.31 2.69
3701 7257 7.057894 AGTGGGTAACAATCAAAAACTCTGTA 58.942 34.615 0.00 0.00 39.74 2.74
3711 7267 8.086143 AGCTAACTATAGTGGGTAACAATCAA 57.914 34.615 6.06 0.00 39.74 2.57
3722 7278 7.981789 TGTTGAAGATTGAGCTAACTATAGTGG 59.018 37.037 6.06 4.06 0.00 4.00
3763 7319 2.032117 CACGCAGTTTGAGTGCACATAA 60.032 45.455 21.04 10.66 44.55 1.90
3780 7336 6.472808 TGTTCAAAAAGTAAAACATACCACGC 59.527 34.615 0.00 0.00 0.00 5.34
3843 7399 6.823182 TGCAGTGCATTATGATGTAGTAACTT 59.177 34.615 15.37 0.00 35.63 2.66
3864 7420 7.212976 ACTACATATGAGGAGTAACAATGCAG 58.787 38.462 10.38 0.00 0.00 4.41
3941 7497 3.055312 GGACGGAGAGGGAACAGTAAAAT 60.055 47.826 0.00 0.00 0.00 1.82
3942 7498 2.301009 GGACGGAGAGGGAACAGTAAAA 59.699 50.000 0.00 0.00 0.00 1.52
3945 7501 0.702902 AGGACGGAGAGGGAACAGTA 59.297 55.000 0.00 0.00 0.00 2.74
3959 7515 6.091441 CCAAAGACATAAGAGAAGAAAGGACG 59.909 42.308 0.00 0.00 0.00 4.79
3982 7538 4.030216 ACTTCCTTTTCTTTTTGGAGCCA 58.970 39.130 0.00 0.00 0.00 4.75
3999 7555 3.127721 GCACAAGCTTTCCTCATACTTCC 59.872 47.826 0.00 0.00 37.91 3.46
4000 7556 3.127721 GGCACAAGCTTTCCTCATACTTC 59.872 47.826 0.00 0.00 41.70 3.01
4077 7633 9.683069 ACAGAGTAAGAACATAAAATGCAAAAG 57.317 29.630 0.00 0.00 0.00 2.27
4178 7734 7.998383 TGCAGTCTATACCAATGGAATAAACAT 59.002 33.333 6.16 0.00 0.00 2.71
4189 7745 6.015350 ACGCTATAGTTGCAGTCTATACCAAT 60.015 38.462 13.23 0.00 31.64 3.16
4243 7799 2.158900 ACCAGATCCGGCTCAACTTATG 60.159 50.000 8.23 0.00 0.00 1.90
4244 7800 2.119495 ACCAGATCCGGCTCAACTTAT 58.881 47.619 8.23 0.00 0.00 1.73
4246 7802 1.568504 TACCAGATCCGGCTCAACTT 58.431 50.000 8.23 0.00 0.00 2.66
4247 7803 1.207329 GTTACCAGATCCGGCTCAACT 59.793 52.381 8.23 0.00 0.00 3.16
4248 7804 1.207329 AGTTACCAGATCCGGCTCAAC 59.793 52.381 8.23 3.24 0.00 3.18
4250 7806 0.824109 CAGTTACCAGATCCGGCTCA 59.176 55.000 8.23 0.00 0.00 4.26
4251 7807 1.112113 TCAGTTACCAGATCCGGCTC 58.888 55.000 0.00 0.00 0.00 4.70
4252 7808 1.482593 CTTCAGTTACCAGATCCGGCT 59.517 52.381 0.00 0.00 0.00 5.52
4253 7809 1.941325 CTTCAGTTACCAGATCCGGC 58.059 55.000 0.00 0.00 0.00 6.13
4254 7810 1.482593 AGCTTCAGTTACCAGATCCGG 59.517 52.381 0.00 0.00 0.00 5.14
4255 7811 2.093973 ACAGCTTCAGTTACCAGATCCG 60.094 50.000 0.00 0.00 0.00 4.18
4256 7812 3.618690 ACAGCTTCAGTTACCAGATCC 57.381 47.619 0.00 0.00 0.00 3.36
4297 7853 7.527196 GCAGTTCTATCCTAATATACAAGCCCA 60.527 40.741 0.00 0.00 0.00 5.36
4300 7856 8.833231 TTGCAGTTCTATCCTAATATACAAGC 57.167 34.615 0.00 0.00 0.00 4.01
4331 7887 3.326747 CTTAAGAACCCTGTTGAGTCCG 58.673 50.000 0.00 0.00 0.00 4.79
4373 7929 4.154347 GAGCCGGCCACTGAGGAG 62.154 72.222 26.15 0.00 41.22 3.69
4374 7930 4.704103 AGAGCCGGCCACTGAGGA 62.704 66.667 26.15 0.00 41.22 3.71
4375 7931 4.463879 CAGAGCCGGCCACTGAGG 62.464 72.222 33.56 15.88 41.84 3.86
4376 7932 3.655810 GACAGAGCCGGCCACTGAG 62.656 68.421 39.20 24.17 35.85 3.35
4377 7933 3.695606 GACAGAGCCGGCCACTGA 61.696 66.667 39.20 0.00 35.85 3.41
4378 7934 1.960040 TATGACAGAGCCGGCCACTG 61.960 60.000 34.38 34.38 37.62 3.66
4379 7935 1.050988 ATATGACAGAGCCGGCCACT 61.051 55.000 26.15 20.52 0.00 4.00
4400 7956 9.206690 ACCTATCATATCATATTCCGAAGATGT 57.793 33.333 13.96 6.04 32.16 3.06
4431 7987 3.695830 AATCTGACCGAACCTTGCTAA 57.304 42.857 0.00 0.00 0.00 3.09
4463 8019 4.874966 TGTTCAACCTGCCAAAAAGAAATG 59.125 37.500 0.00 0.00 0.00 2.32
4566 8122 4.098894 ACACTTATTTTAGGACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4567 8123 4.161754 AGACACTTATTTTAGGACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
4568 8124 5.105473 TGAGACACTTATTTTAGGACGGAGG 60.105 44.000 0.00 0.00 0.00 4.30
4569 8125 5.962433 TGAGACACTTATTTTAGGACGGAG 58.038 41.667 0.00 0.00 0.00 4.63
4570 8126 5.988310 TGAGACACTTATTTTAGGACGGA 57.012 39.130 0.00 0.00 0.00 4.69
4571 8127 6.164176 AGTTGAGACACTTATTTTAGGACGG 58.836 40.000 0.00 0.00 0.00 4.79
4572 8128 7.653767 AAGTTGAGACACTTATTTTAGGACG 57.346 36.000 0.00 0.00 35.10 4.79
4573 8129 8.837389 ACAAAGTTGAGACACTTATTTTAGGAC 58.163 33.333 0.00 0.00 35.87 3.85
4574 8130 8.974060 ACAAAGTTGAGACACTTATTTTAGGA 57.026 30.769 0.00 0.00 35.87 2.94
4582 8138 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
4583 8139 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
4584 8140 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
4585 8141 9.310716 ACTAAAGTTAGTACAAAGTTGAGACAC 57.689 33.333 1.81 0.00 41.92 3.67
4611 8167 9.090692 GTGTCTCAACTTTAGTACAACTTTGTA 57.909 33.333 0.00 0.00 42.35 2.41
4612 8168 7.822822 AGTGTCTCAACTTTAGTACAACTTTGT 59.177 33.333 0.00 0.00 44.86 2.83
4613 8169 8.197988 AGTGTCTCAACTTTAGTACAACTTTG 57.802 34.615 0.00 0.00 0.00 2.77
4614 8170 8.788325 AAGTGTCTCAACTTTAGTACAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
4622 8178 8.837389 GTCCAAAATAAGTGTCTCAACTTTAGT 58.163 33.333 0.00 0.00 40.77 2.24
4623 8179 8.009974 CGTCCAAAATAAGTGTCTCAACTTTAG 58.990 37.037 0.00 0.00 40.77 1.85
4624 8180 7.041644 CCGTCCAAAATAAGTGTCTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
4625 8181 6.238648 CCGTCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
4626 8182 5.238650 CCGTCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
4627 8183 4.755123 CCGTCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
4628 8184 4.753107 TCCGTCCAAAATAAGTGTCTCAAC 59.247 41.667 0.00 0.00 0.00 3.18
4629 8185 4.963373 TCCGTCCAAAATAAGTGTCTCAA 58.037 39.130 0.00 0.00 0.00 3.02
4630 8186 4.562757 CCTCCGTCCAAAATAAGTGTCTCA 60.563 45.833 0.00 0.00 0.00 3.27
4631 8187 3.933332 CCTCCGTCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4632 8188 3.307480 CCCTCCGTCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4633 8189 3.007635 CCCTCCGTCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4634 8190 2.640826 TCCCTCCGTCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
4635 8191 3.270877 CTCCCTCCGTCCAAAATAAGTG 58.729 50.000 0.00 0.00 0.00 3.16
4636 8192 2.355818 GCTCCCTCCGTCCAAAATAAGT 60.356 50.000 0.00 0.00 0.00 2.24
4637 8193 2.289565 GCTCCCTCCGTCCAAAATAAG 58.710 52.381 0.00 0.00 0.00 1.73
4638 8194 1.406341 CGCTCCCTCCGTCCAAAATAA 60.406 52.381 0.00 0.00 0.00 1.40
4639 8195 0.177141 CGCTCCCTCCGTCCAAAATA 59.823 55.000 0.00 0.00 0.00 1.40
4640 8196 1.078426 CGCTCCCTCCGTCCAAAAT 60.078 57.895 0.00 0.00 0.00 1.82
4641 8197 2.345991 CGCTCCCTCCGTCCAAAA 59.654 61.111 0.00 0.00 0.00 2.44
4642 8198 3.702048 CCGCTCCCTCCGTCCAAA 61.702 66.667 0.00 0.00 0.00 3.28
4643 8199 4.689549 TCCGCTCCCTCCGTCCAA 62.690 66.667 0.00 0.00 0.00 3.53
4649 8205 3.070987 TACTCCCTCCGCTCCCTCC 62.071 68.421 0.00 0.00 0.00 4.30
4650 8206 1.829096 GTACTCCCTCCGCTCCCTC 60.829 68.421 0.00 0.00 0.00 4.30
4651 8207 1.950748 ATGTACTCCCTCCGCTCCCT 61.951 60.000 0.00 0.00 0.00 4.20
4652 8208 1.457831 ATGTACTCCCTCCGCTCCC 60.458 63.158 0.00 0.00 0.00 4.30
4653 8209 0.468400 AGATGTACTCCCTCCGCTCC 60.468 60.000 0.00 0.00 0.00 4.70
4654 8210 1.404843 AAGATGTACTCCCTCCGCTC 58.595 55.000 0.00 0.00 0.00 5.03
4655 8211 1.867363 AAAGATGTACTCCCTCCGCT 58.133 50.000 0.00 0.00 0.00 5.52
4656 8212 2.280628 CAAAAGATGTACTCCCTCCGC 58.719 52.381 0.00 0.00 0.00 5.54
4657 8213 2.280628 GCAAAAGATGTACTCCCTCCG 58.719 52.381 0.00 0.00 0.00 4.63
4658 8214 3.350219 TGCAAAAGATGTACTCCCTCC 57.650 47.619 0.00 0.00 0.00 4.30
4659 8215 7.420800 CAATAATGCAAAAGATGTACTCCCTC 58.579 38.462 0.00 0.00 0.00 4.30
4660 8216 6.322201 CCAATAATGCAAAAGATGTACTCCCT 59.678 38.462 0.00 0.00 0.00 4.20
4661 8217 6.507023 CCAATAATGCAAAAGATGTACTCCC 58.493 40.000 0.00 0.00 0.00 4.30
4662 8218 5.979517 GCCAATAATGCAAAAGATGTACTCC 59.020 40.000 0.00 0.00 0.00 3.85
4663 8219 5.979517 GGCCAATAATGCAAAAGATGTACTC 59.020 40.000 0.00 0.00 0.00 2.59
4664 8220 5.450412 CGGCCAATAATGCAAAAGATGTACT 60.450 40.000 2.24 0.00 0.00 2.73
4665 8221 4.739716 CGGCCAATAATGCAAAAGATGTAC 59.260 41.667 2.24 0.00 0.00 2.90
4666 8222 4.642437 TCGGCCAATAATGCAAAAGATGTA 59.358 37.500 2.24 0.00 0.00 2.29
4667 8223 3.446873 TCGGCCAATAATGCAAAAGATGT 59.553 39.130 2.24 0.00 0.00 3.06
4668 8224 4.044336 TCGGCCAATAATGCAAAAGATG 57.956 40.909 2.24 0.00 0.00 2.90
4731 8288 8.126871 TGTCAAATAGTACAATAATCGACAGC 57.873 34.615 0.00 0.00 0.00 4.40
4763 8320 5.200454 CGAGCTCATGGAAATAAAATGACG 58.800 41.667 15.40 0.00 0.00 4.35
4788 8345 2.555732 TAGGAACCGGACCCATAACT 57.444 50.000 9.46 0.00 0.00 2.24
4789 8346 3.632643 TTTAGGAACCGGACCCATAAC 57.367 47.619 9.46 0.00 0.00 1.89
4791 8348 2.506644 CCTTTTAGGAACCGGACCCATA 59.493 50.000 9.46 0.00 37.67 2.74
4796 8353 0.327259 AGGCCTTTTAGGAACCGGAC 59.673 55.000 9.46 0.76 37.67 4.79
4812 8376 4.632327 AAAGAGGATAGGCAGATAAGGC 57.368 45.455 0.00 0.00 0.00 4.35
4871 8435 6.389906 GGCTAATGCAGACTTTTTGTACATT 58.610 36.000 0.00 0.00 41.91 2.71
4876 8440 3.500343 AGGGCTAATGCAGACTTTTTGT 58.500 40.909 0.00 0.00 41.91 2.83
4970 8534 6.152831 AGCATTTGGTTATCTTACCTGAAACC 59.847 38.462 0.00 0.00 40.03 3.27
5053 8617 7.288158 AGGACCTAGGAGTATTTCAAGATGTAC 59.712 40.741 17.98 0.00 0.00 2.90
5110 9039 2.441375 TCACTCCCATTTGACCAACTCA 59.559 45.455 0.00 0.00 0.00 3.41
5167 9096 2.028925 GCACAAACCAAAGGGCCG 59.971 61.111 0.00 0.00 37.90 6.13
5170 9099 2.093764 TGAAACTGCACAAACCAAAGGG 60.094 45.455 0.00 0.00 41.29 3.95
5424 9360 4.497300 CAGGTGCTGTTTTATCCAAATGG 58.503 43.478 0.00 0.00 0.00 3.16
5426 9362 3.577848 TGCAGGTGCTGTTTTATCCAAAT 59.422 39.130 3.18 0.00 42.66 2.32
5430 9366 3.578688 CTTTGCAGGTGCTGTTTTATCC 58.421 45.455 3.18 0.00 42.66 2.59
5432 9368 2.364970 TGCTTTGCAGGTGCTGTTTTAT 59.635 40.909 3.18 0.00 42.66 1.40
5433 9369 1.753649 TGCTTTGCAGGTGCTGTTTTA 59.246 42.857 3.18 0.00 42.66 1.52
5434 9370 0.536260 TGCTTTGCAGGTGCTGTTTT 59.464 45.000 3.18 0.00 42.66 2.43
5485 9421 7.071698 AGCTGAAGATACCAAGAATAGGAATGA 59.928 37.037 0.00 0.00 0.00 2.57
5700 9641 6.737720 TGTGAAGCAGATGGAGTATAGATT 57.262 37.500 0.00 0.00 0.00 2.40
5802 9743 0.542333 TCAGTTCACCACGGAAACCA 59.458 50.000 0.00 0.00 0.00 3.67
5811 9752 7.458397 ACTATACCTTGAAAATCAGTTCACCA 58.542 34.615 0.00 0.00 37.24 4.17
5814 9755 8.593679 TGAGACTATACCTTGAAAATCAGTTCA 58.406 33.333 0.00 0.00 35.72 3.18
6010 9954 9.512435 CACAAATTCAGAATCAGAATATCAACC 57.488 33.333 1.29 0.00 34.78 3.77
6013 9957 7.201848 GCCCACAAATTCAGAATCAGAATATCA 60.202 37.037 1.29 0.00 34.78 2.15
6058 10002 5.534207 TGCATTTTGACAACAGGAAATCT 57.466 34.783 0.00 0.00 0.00 2.40
6201 10145 2.160721 AGGAATACCGAAGAGGAGCA 57.839 50.000 0.00 0.00 45.00 4.26
6209 10153 4.607239 AGGTAGAGTCAAGGAATACCGAA 58.393 43.478 0.00 0.00 40.67 4.30
6212 10156 4.737055 GCGAAGGTAGAGTCAAGGAATACC 60.737 50.000 0.00 0.00 36.87 2.73
6216 10160 1.549170 GGCGAAGGTAGAGTCAAGGAA 59.451 52.381 0.00 0.00 0.00 3.36
6219 10163 0.175989 GGGGCGAAGGTAGAGTCAAG 59.824 60.000 0.00 0.00 0.00 3.02
6221 10165 2.050350 CGGGGCGAAGGTAGAGTCA 61.050 63.158 0.00 0.00 0.00 3.41
6222 10166 1.751927 TCGGGGCGAAGGTAGAGTC 60.752 63.158 0.00 0.00 31.06 3.36
6230 10174 2.859273 ATTCAGCTGTCGGGGCGAAG 62.859 60.000 14.67 0.00 37.72 3.79
6231 10175 2.852495 GATTCAGCTGTCGGGGCGAA 62.852 60.000 14.67 0.00 37.72 4.70
6233 10177 2.892425 GATTCAGCTGTCGGGGCG 60.892 66.667 14.67 0.00 34.52 6.13
6238 10183 4.627035 TGACAACTTATGATTCAGCTGTCG 59.373 41.667 14.67 0.00 35.75 4.35
6240 10185 5.356190 CCATGACAACTTATGATTCAGCTGT 59.644 40.000 14.67 0.00 0.00 4.40
6241 10186 5.220989 CCCATGACAACTTATGATTCAGCTG 60.221 44.000 7.63 7.63 0.00 4.24
6244 10189 6.769341 TGATCCCATGACAACTTATGATTCAG 59.231 38.462 0.00 0.00 0.00 3.02
6265 10210 4.318332 TGTGTTCTGTGAAGGACATGATC 58.682 43.478 0.00 0.00 32.74 2.92
6266 10211 4.356405 TGTGTTCTGTGAAGGACATGAT 57.644 40.909 0.00 0.00 32.74 2.45
6267 10212 3.836365 TGTGTTCTGTGAAGGACATGA 57.164 42.857 0.00 0.00 32.74 3.07
6268 10213 3.124128 CGATGTGTTCTGTGAAGGACATG 59.876 47.826 8.65 0.00 32.74 3.21
6269 10214 3.329386 CGATGTGTTCTGTGAAGGACAT 58.671 45.455 0.00 0.00 32.74 3.06
6270 10215 2.547855 CCGATGTGTTCTGTGAAGGACA 60.548 50.000 0.00 0.00 0.00 4.02
6396 10343 3.440127 GTGGAATGAAGGGGGATTTGAA 58.560 45.455 0.00 0.00 0.00 2.69
6401 10348 0.254299 AGGGTGGAATGAAGGGGGAT 60.254 55.000 0.00 0.00 0.00 3.85
6419 10366 2.058798 CAATGCTCAGTTTTGCTGCAG 58.941 47.619 10.11 10.11 44.66 4.41
6420 10367 1.409790 ACAATGCTCAGTTTTGCTGCA 59.590 42.857 0.00 0.00 44.66 4.41
6443 10390 4.518211 GCTATCTCCTGCAAATGTAAGCAT 59.482 41.667 0.00 0.00 40.42 3.79
6851 10798 1.743958 CACAGGTACGAGTCCAGGTAG 59.256 57.143 0.00 0.00 0.00 3.18
6894 10841 4.609247 ATCTACTCGACGCGCGGC 62.609 66.667 35.22 32.56 41.33 6.53
6898 10845 0.110599 CTAGGCATCTACTCGACGCG 60.111 60.000 3.53 3.53 29.94 6.01
6956 10915 4.739587 TGTACCACTCCGCATATAAACA 57.260 40.909 0.00 0.00 0.00 2.83
6981 10943 2.484264 AGTTGCACCGTAGCATCTTTTC 59.516 45.455 0.00 0.00 45.19 2.29
7023 10986 2.182827 TCTGAATCAGGGTCAGTCCAG 58.817 52.381 10.71 0.00 42.63 3.86
7086 13048 1.537202 GCCGCAGTCATCAAAAGACTT 59.463 47.619 0.00 0.00 43.47 3.01
7103 13065 1.798813 GTATCTATTCCCAAAGCGCCG 59.201 52.381 2.29 0.00 0.00 6.46
7222 13515 2.352388 GGTGCTTTAAGTATCGTGCCA 58.648 47.619 0.00 0.00 0.00 4.92
7250 13543 3.741476 GCGTTCCCAGCAAGGCAG 61.741 66.667 0.00 0.00 37.17 4.85
7256 13549 1.298157 CGATTCAAGCGTTCCCAGCA 61.298 55.000 0.00 0.00 37.01 4.41
7258 13551 1.982073 GCCGATTCAAGCGTTCCCAG 61.982 60.000 0.00 0.00 0.00 4.45
7267 13560 3.385079 GTTAGAAACGGCCGATTCAAG 57.615 47.619 38.71 10.30 30.68 3.02
7284 13577 4.054780 ACTTTTGCAGTCTGTCTCGTTA 57.945 40.909 0.93 0.00 0.00 3.18
7286 13579 2.604046 ACTTTTGCAGTCTGTCTCGT 57.396 45.000 0.93 0.00 0.00 4.18
7288 13581 2.945668 ACCAACTTTTGCAGTCTGTCTC 59.054 45.455 0.93 0.00 32.94 3.36
7291 13584 2.024414 GGACCAACTTTTGCAGTCTGT 58.976 47.619 0.93 0.00 32.94 3.41
7293 13586 1.692411 GGGACCAACTTTTGCAGTCT 58.308 50.000 0.00 0.00 32.94 3.24
7316 13609 3.797353 CCCTGCACCGCACCCTAT 61.797 66.667 0.00 0.00 33.79 2.57
7340 13634 6.017109 ACAACCAATATGATATCAGGCGTTTC 60.017 38.462 11.78 0.00 0.00 2.78
7364 13658 3.696306 GGCTCTGATTGGCCTCTAC 57.304 57.895 3.32 0.00 44.48 2.59
7478 13783 3.599343 TGCGACCAATATGATATCAGGC 58.401 45.455 11.78 0.00 0.00 4.85
7556 14391 1.335872 CGGCAGGCGTTGAAGAAATTT 60.336 47.619 8.53 0.00 0.00 1.82
7558 14393 1.875963 CGGCAGGCGTTGAAGAAAT 59.124 52.632 8.53 0.00 0.00 2.17
7559 14394 2.903547 GCGGCAGGCGTTGAAGAAA 61.904 57.895 18.79 0.00 0.00 2.52
7587 14422 7.588497 AAAAGAGAGCAAAAATACAAGGACT 57.412 32.000 0.00 0.00 0.00 3.85
7618 14453 2.277692 TGACTATCGCGCGGTTCG 60.278 61.111 31.69 19.74 42.12 3.95
7625 14460 1.200483 GGTGATGTGTGACTATCGCG 58.800 55.000 0.00 0.00 35.27 5.87
7913 15320 0.324943 CCGGAGTTGACCACCTCATT 59.675 55.000 0.00 0.00 0.00 2.57
7965 15374 3.621268 GCCCACTTCAACCTTTTGTTTTC 59.379 43.478 0.00 0.00 34.00 2.29
8024 16740 8.490311 TCCTTCTTCTTCTTCTTCTTCTTCTTT 58.510 33.333 0.00 0.00 0.00 2.52
8134 18512 5.474532 TCAACGTTGCTAACTAGGTAGAAGA 59.525 40.000 23.47 0.00 0.00 2.87
8407 18822 5.450592 TGTAGTTTGATTGCTTGCATTGA 57.549 34.783 0.00 0.00 0.00 2.57
8408 18823 5.445407 GCATGTAGTTTGATTGCTTGCATTG 60.445 40.000 0.00 0.00 33.58 2.82
8487 18903 5.356882 TCTCTGTTTTAGTCCATTTTGCG 57.643 39.130 0.00 0.00 0.00 4.85
8556 18973 3.195825 AGCCGTAGTTCAGCTCAAAGTAT 59.804 43.478 0.00 0.00 28.40 2.12
8557 18974 2.561419 AGCCGTAGTTCAGCTCAAAGTA 59.439 45.455 0.00 0.00 28.40 2.24
8592 19009 2.405357 CGATGATTCGCGTCAATCCTAC 59.595 50.000 15.48 7.82 38.75 3.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.