Multiple sequence alignment - TraesCS2D01G167900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G167900 chr2D 100.000 7822 0 0 1 7822 111342055 111349876 0.000000e+00 14445.0
1 TraesCS2D01G167900 chr2D 88.114 387 21 13 3207 3576 95171070 95170692 3.350000e-118 436.0
2 TraesCS2D01G167900 chr2D 83.043 460 70 6 2662 3117 303707247 303706792 2.030000e-110 411.0
3 TraesCS2D01G167900 chr2D 91.638 287 17 3 2374 2658 95171362 95171081 2.650000e-104 390.0
4 TraesCS2D01G167900 chr2D 95.402 174 8 0 5745 5918 560959650 560959477 2.150000e-70 278.0
5 TraesCS2D01G167900 chr2D 94.857 175 9 0 5744 5918 426427967 426427793 2.780000e-69 274.0
6 TraesCS2D01G167900 chr2D 95.808 167 7 0 5745 5911 554128208 554128374 3.600000e-68 270.0
7 TraesCS2D01G167900 chr2D 94.318 176 9 1 5746 5920 24312357 24312182 1.290000e-67 268.0
8 TraesCS2D01G167900 chr2D 94.444 90 5 0 1688 1777 165959653 165959742 1.060000e-28 139.0
9 TraesCS2D01G167900 chr2B 95.695 6736 178 46 608 7302 161463845 161470509 0.000000e+00 10730.0
10 TraesCS2D01G167900 chr2B 79.612 309 19 11 7363 7653 161470823 161471105 1.730000e-41 182.0
11 TraesCS2D01G167900 chr2B 84.896 192 14 3 400 576 161463654 161463845 6.240000e-41 180.0
12 TraesCS2D01G167900 chr2B 78.409 176 20 7 6270 6432 161469272 161469442 1.800000e-16 99.0
13 TraesCS2D01G167900 chr2B 81.818 88 10 6 5695 5779 748344315 748344231 1.410000e-07 69.4
14 TraesCS2D01G167900 chr2A 98.017 3984 40 16 1773 5747 111433784 111437737 0.000000e+00 6883.0
15 TraesCS2D01G167900 chr2A 90.284 1410 66 14 5909 7304 111437736 111439088 0.000000e+00 1779.0
16 TraesCS2D01G167900 chr2A 91.060 906 51 18 794 1693 111432903 111433784 0.000000e+00 1197.0
17 TraesCS2D01G167900 chr2A 87.559 635 48 13 189 802 111432113 111432737 0.000000e+00 706.0
18 TraesCS2D01G167900 chr2A 83.051 531 78 9 2662 3181 74047007 74047536 9.190000e-129 472.0
19 TraesCS2D01G167900 chr2A 87.923 207 9 7 7369 7561 111453503 111453707 6.110000e-56 230.0
20 TraesCS2D01G167900 chr2A 97.761 134 1 2 7626 7758 111453708 111453840 6.110000e-56 230.0
21 TraesCS2D01G167900 chr2A 93.478 92 6 0 1688 1779 10843303 10843212 3.810000e-28 137.0
22 TraesCS2D01G167900 chr2A 93.878 49 3 0 7765 7813 111453833 111453881 3.030000e-09 75.0
23 TraesCS2D01G167900 chr1D 85.261 536 67 6 2662 3186 44152587 44152053 6.900000e-150 542.0
24 TraesCS2D01G167900 chr1D 80.561 535 86 16 2662 3186 11707211 11706685 5.690000e-106 396.0
25 TraesCS2D01G167900 chr3B 82.519 532 82 5 2662 3183 385202449 385202979 2.570000e-124 457.0
26 TraesCS2D01G167900 chr3B 91.541 331 24 4 6938 7267 152121266 152121593 3.330000e-123 453.0
27 TraesCS2D01G167900 chr3B 82.552 533 66 13 2662 3183 642092966 642093482 2.000000e-120 444.0
28 TraesCS2D01G167900 chr3B 95.349 172 8 0 5745 5916 120616912 120617083 2.780000e-69 274.0
29 TraesCS2D01G167900 chr3B 86.900 229 28 2 1 227 354166520 354166748 1.010000e-63 255.0
30 TraesCS2D01G167900 chr7D 91.239 331 25 4 6938 7267 546693910 546694237 1.550000e-121 448.0
31 TraesCS2D01G167900 chrUn 83.726 467 65 8 2722 3180 305172345 305171882 1.560000e-116 431.0
32 TraesCS2D01G167900 chr3D 83.726 467 65 8 2722 3180 25990484 25990021 1.560000e-116 431.0
33 TraesCS2D01G167900 chr5D 81.633 539 80 16 2662 3186 534012137 534012670 5.610000e-116 429.0
34 TraesCS2D01G167900 chr5A 90.184 326 29 3 6942 7267 237957469 237957791 9.380000e-114 422.0
35 TraesCS2D01G167900 chr5A 96.970 165 4 1 5746 5910 452111600 452111763 7.730000e-70 276.0
36 TraesCS2D01G167900 chr3A 89.299 271 26 3 6942 7212 123779798 123779531 3.500000e-88 337.0
37 TraesCS2D01G167900 chr4B 94.318 176 8 2 5737 5910 53587826 53588001 1.290000e-67 268.0
38 TraesCS2D01G167900 chr5B 92.432 185 12 2 5730 5913 295174705 295174888 6.020000e-66 263.0
39 TraesCS2D01G167900 chr5B 94.186 86 5 0 1692 1777 429030692 429030607 1.770000e-26 132.0
40 TraesCS2D01G167900 chr1A 94.624 93 5 0 1689 1781 58483350 58483442 2.270000e-30 145.0
41 TraesCS2D01G167900 chr1B 93.548 93 6 0 1684 1776 157900317 157900409 1.060000e-28 139.0
42 TraesCS2D01G167900 chr7A 94.382 89 5 0 1688 1776 659068672 659068584 3.810000e-28 137.0
43 TraesCS2D01G167900 chr6A 93.407 91 6 0 1691 1781 101438277 101438367 1.370000e-27 135.0
44 TraesCS2D01G167900 chr7B 91.000 100 8 1 1684 1783 401557193 401557291 4.920000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G167900 chr2D 111342055 111349876 7821 False 14445.00 14445 100.000 1 7822 1 chr2D.!!$F1 7821
1 TraesCS2D01G167900 chr2D 95170692 95171362 670 True 413.00 436 89.876 2374 3576 2 chr2D.!!$R5 1202
2 TraesCS2D01G167900 chr2B 161463654 161471105 7451 False 2797.75 10730 84.653 400 7653 4 chr2B.!!$F1 7253
3 TraesCS2D01G167900 chr2A 111432113 111439088 6975 False 2641.25 6883 91.730 189 7304 4 chr2A.!!$F2 7115
4 TraesCS2D01G167900 chr2A 74047007 74047536 529 False 472.00 472 83.051 2662 3181 1 chr2A.!!$F1 519
5 TraesCS2D01G167900 chr1D 44152053 44152587 534 True 542.00 542 85.261 2662 3186 1 chr1D.!!$R2 524
6 TraesCS2D01G167900 chr1D 11706685 11707211 526 True 396.00 396 80.561 2662 3186 1 chr1D.!!$R1 524
7 TraesCS2D01G167900 chr3B 385202449 385202979 530 False 457.00 457 82.519 2662 3183 1 chr3B.!!$F4 521
8 TraesCS2D01G167900 chr3B 642092966 642093482 516 False 444.00 444 82.552 2662 3183 1 chr3B.!!$F5 521
9 TraesCS2D01G167900 chr5D 534012137 534012670 533 False 429.00 429 81.633 2662 3186 1 chr5D.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.034186 TTGATCGCCCATCTGCCTTT 60.034 50.000 0.00 0.00 31.92 3.11 F
177 178 0.034186 ATCGCCCATCTGCCTTTCAA 60.034 50.000 0.00 0.00 0.00 2.69 F
180 181 0.244721 GCCCATCTGCCTTTCAACAC 59.755 55.000 0.00 0.00 0.00 3.32 F
1525 1737 0.247736 CCGATGGAGTATAGCCTGGC 59.752 60.000 11.65 11.65 0.00 4.85 F
1954 2169 1.024271 TTCTGTTTCCTGCACAGTGC 58.976 50.000 19.37 19.37 45.29 4.40 F
3201 3459 1.682854 CACCTTGTCAGCCACAATTGT 59.317 47.619 4.92 4.92 44.32 2.71 F
3202 3460 1.956477 ACCTTGTCAGCCACAATTGTC 59.044 47.619 8.48 0.00 44.32 3.18 F
3203 3461 2.233271 CCTTGTCAGCCACAATTGTCT 58.767 47.619 8.48 0.47 44.32 3.41 F
5755 6042 1.614413 GGTAAGCTCATACTCCCTCCG 59.386 57.143 0.00 0.00 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1353 1565 2.370849 TCAACACTACCTTCCACCTTCC 59.629 50.000 0.00 0.00 0.00 3.46 R
1360 1572 2.548480 GCACAGTTCAACACTACCTTCC 59.452 50.000 0.00 0.00 32.76 3.46 R
1753 1965 2.774234 ACTCCCTCTGTCCCATAATGTG 59.226 50.000 0.00 0.00 0.00 3.21 R
3075 3332 2.229792 GCATGCGGGGATGAAAATCTA 58.770 47.619 0.00 0.00 0.00 1.98 R
3946 4222 1.758280 ACGACAGGTTTGGTGTACTCA 59.242 47.619 0.00 0.00 0.00 3.41 R
4431 4712 2.630158 CTGAAAGATGCTGCAGTAGCT 58.370 47.619 17.31 17.31 45.79 3.32 R
5183 5468 4.409901 TGTGATGCATATCCTTTCCTCTCA 59.590 41.667 0.00 0.00 32.09 3.27 R
5774 6061 7.378966 TGTAGTCACTTGTTGAAATCTCTAGG 58.621 38.462 0.00 0.00 35.39 3.02 R
7678 8249 0.030773 GCGACTGGCGAGATATCACA 59.969 55.000 7.31 0.00 44.57 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.251750 GCATAACCCAAACTCTTTTTATTTCC 57.748 34.615 0.00 0.00 0.00 3.13
26 27 7.333423 GCATAACCCAAACTCTTTTTATTTCCC 59.667 37.037 0.00 0.00 0.00 3.97
27 28 6.816616 AACCCAAACTCTTTTTATTTCCCA 57.183 33.333 0.00 0.00 0.00 4.37
28 29 6.816616 ACCCAAACTCTTTTTATTTCCCAA 57.183 33.333 0.00 0.00 0.00 4.12
29 30 7.201702 ACCCAAACTCTTTTTATTTCCCAAA 57.798 32.000 0.00 0.00 0.00 3.28
30 31 7.279615 ACCCAAACTCTTTTTATTTCCCAAAG 58.720 34.615 0.00 0.00 0.00 2.77
31 32 7.092623 ACCCAAACTCTTTTTATTTCCCAAAGT 60.093 33.333 0.00 0.00 0.00 2.66
32 33 8.425703 CCCAAACTCTTTTTATTTCCCAAAGTA 58.574 33.333 0.00 0.00 0.00 2.24
33 34 9.996554 CCAAACTCTTTTTATTTCCCAAAGTAT 57.003 29.630 0.00 0.00 0.00 2.12
36 37 9.489084 AACTCTTTTTATTTCCCAAAGTATTGC 57.511 29.630 0.00 0.00 35.10 3.56
37 38 8.646900 ACTCTTTTTATTTCCCAAAGTATTGCA 58.353 29.630 0.00 0.00 35.10 4.08
38 39 9.487790 CTCTTTTTATTTCCCAAAGTATTGCAA 57.512 29.630 0.00 0.00 35.10 4.08
39 40 9.487790 TCTTTTTATTTCCCAAAGTATTGCAAG 57.512 29.630 4.94 0.00 35.10 4.01
40 41 8.614469 TTTTTATTTCCCAAAGTATTGCAAGG 57.386 30.769 4.94 0.00 35.10 3.61
41 42 7.546250 TTTATTTCCCAAAGTATTGCAAGGA 57.454 32.000 4.94 0.75 35.10 3.36
42 43 7.546250 TTATTTCCCAAAGTATTGCAAGGAA 57.454 32.000 4.94 7.62 34.55 3.36
43 44 5.467035 TTTCCCAAAGTATTGCAAGGAAG 57.533 39.130 4.94 0.00 36.43 3.46
44 45 4.380843 TCCCAAAGTATTGCAAGGAAGA 57.619 40.909 4.94 0.00 35.10 2.87
45 46 4.335416 TCCCAAAGTATTGCAAGGAAGAG 58.665 43.478 4.94 0.00 35.10 2.85
46 47 3.119352 CCCAAAGTATTGCAAGGAAGAGC 60.119 47.826 4.94 0.00 35.10 4.09
47 48 3.426695 CCAAAGTATTGCAAGGAAGAGCG 60.427 47.826 4.94 0.00 35.10 5.03
48 49 1.373570 AGTATTGCAAGGAAGAGCGC 58.626 50.000 4.94 0.00 0.00 5.92
49 50 0.378610 GTATTGCAAGGAAGAGCGCC 59.621 55.000 2.29 0.00 0.00 6.53
50 51 0.035534 TATTGCAAGGAAGAGCGCCA 60.036 50.000 2.29 0.00 0.00 5.69
51 52 0.895100 ATTGCAAGGAAGAGCGCCAA 60.895 50.000 2.29 0.00 0.00 4.52
52 53 0.895100 TTGCAAGGAAGAGCGCCAAT 60.895 50.000 2.29 0.00 0.00 3.16
53 54 0.895100 TGCAAGGAAGAGCGCCAATT 60.895 50.000 2.29 0.00 0.00 2.32
54 55 0.457337 GCAAGGAAGAGCGCCAATTG 60.457 55.000 2.29 0.00 0.00 2.32
55 56 1.167851 CAAGGAAGAGCGCCAATTGA 58.832 50.000 7.12 0.00 0.00 2.57
56 57 1.747355 CAAGGAAGAGCGCCAATTGAT 59.253 47.619 7.12 0.00 0.00 2.57
57 58 2.134789 AGGAAGAGCGCCAATTGATT 57.865 45.000 7.12 0.00 0.00 2.57
58 59 2.019984 AGGAAGAGCGCCAATTGATTC 58.980 47.619 7.12 0.00 0.00 2.52
59 60 1.066152 GGAAGAGCGCCAATTGATTCC 59.934 52.381 7.12 3.94 0.00 3.01
60 61 2.019984 GAAGAGCGCCAATTGATTCCT 58.980 47.619 7.12 0.00 0.00 3.36
61 62 3.206150 GAAGAGCGCCAATTGATTCCTA 58.794 45.455 7.12 0.00 0.00 2.94
62 63 2.843701 AGAGCGCCAATTGATTCCTAG 58.156 47.619 7.12 0.00 0.00 3.02
63 64 2.435805 AGAGCGCCAATTGATTCCTAGA 59.564 45.455 7.12 0.00 0.00 2.43
64 65 3.118261 AGAGCGCCAATTGATTCCTAGAA 60.118 43.478 7.12 0.00 0.00 2.10
65 66 3.209410 AGCGCCAATTGATTCCTAGAAG 58.791 45.455 7.12 0.00 0.00 2.85
66 67 2.287248 GCGCCAATTGATTCCTAGAAGC 60.287 50.000 7.12 0.00 0.00 3.86
67 68 3.209410 CGCCAATTGATTCCTAGAAGCT 58.791 45.455 7.12 0.00 0.00 3.74
68 69 3.629398 CGCCAATTGATTCCTAGAAGCTT 59.371 43.478 7.12 0.00 0.00 3.74
69 70 4.096984 CGCCAATTGATTCCTAGAAGCTTT 59.903 41.667 7.12 0.00 0.00 3.51
70 71 5.296780 CGCCAATTGATTCCTAGAAGCTTTA 59.703 40.000 7.12 0.00 0.00 1.85
71 72 6.512415 CGCCAATTGATTCCTAGAAGCTTTAG 60.512 42.308 7.12 4.67 0.00 1.85
72 73 6.543831 GCCAATTGATTCCTAGAAGCTTTAGA 59.456 38.462 7.12 0.00 0.00 2.10
73 74 7.255070 GCCAATTGATTCCTAGAAGCTTTAGAG 60.255 40.741 7.12 0.00 0.00 2.43
74 75 7.228308 CCAATTGATTCCTAGAAGCTTTAGAGG 59.772 40.741 7.12 13.46 0.00 3.69
75 76 5.878406 TGATTCCTAGAAGCTTTAGAGGG 57.122 43.478 17.48 9.40 0.00 4.30
76 77 5.281314 TGATTCCTAGAAGCTTTAGAGGGT 58.719 41.667 17.48 9.94 0.00 4.34
77 78 5.129485 TGATTCCTAGAAGCTTTAGAGGGTG 59.871 44.000 17.48 3.82 0.00 4.61
78 79 4.062490 TCCTAGAAGCTTTAGAGGGTGT 57.938 45.455 17.48 0.00 0.00 4.16
79 80 4.024670 TCCTAGAAGCTTTAGAGGGTGTC 58.975 47.826 17.48 0.00 0.00 3.67
80 81 3.133183 CCTAGAAGCTTTAGAGGGTGTCC 59.867 52.174 0.00 0.00 0.00 4.02
81 82 2.621070 AGAAGCTTTAGAGGGTGTCCA 58.379 47.619 0.00 0.00 34.83 4.02
82 83 3.185455 AGAAGCTTTAGAGGGTGTCCAT 58.815 45.455 0.00 0.00 34.83 3.41
83 84 3.198853 AGAAGCTTTAGAGGGTGTCCATC 59.801 47.826 0.00 0.00 34.83 3.51
84 85 2.551270 AGCTTTAGAGGGTGTCCATCA 58.449 47.619 3.40 0.00 34.83 3.07
85 86 3.118531 AGCTTTAGAGGGTGTCCATCAT 58.881 45.455 3.40 0.00 34.83 2.45
86 87 3.525199 AGCTTTAGAGGGTGTCCATCATT 59.475 43.478 3.40 0.00 34.83 2.57
87 88 4.018050 AGCTTTAGAGGGTGTCCATCATTT 60.018 41.667 3.40 0.00 34.83 2.32
88 89 4.336713 GCTTTAGAGGGTGTCCATCATTTC 59.663 45.833 3.40 0.00 34.83 2.17
89 90 5.500234 CTTTAGAGGGTGTCCATCATTTCA 58.500 41.667 3.40 0.00 34.83 2.69
90 91 5.512942 TTAGAGGGTGTCCATCATTTCAA 57.487 39.130 3.40 0.00 34.83 2.69
91 92 4.598036 AGAGGGTGTCCATCATTTCAAT 57.402 40.909 3.40 0.00 34.83 2.57
92 93 4.939255 AGAGGGTGTCCATCATTTCAATT 58.061 39.130 3.40 0.00 34.83 2.32
93 94 5.336102 AGAGGGTGTCCATCATTTCAATTT 58.664 37.500 3.40 0.00 34.83 1.82
94 95 5.781818 AGAGGGTGTCCATCATTTCAATTTT 59.218 36.000 3.40 0.00 34.83 1.82
95 96 6.953520 AGAGGGTGTCCATCATTTCAATTTTA 59.046 34.615 3.40 0.00 34.83 1.52
96 97 7.620888 AGAGGGTGTCCATCATTTCAATTTTAT 59.379 33.333 3.40 0.00 34.83 1.40
97 98 7.785033 AGGGTGTCCATCATTTCAATTTTATC 58.215 34.615 0.00 0.00 34.83 1.75
98 99 6.697019 GGGTGTCCATCATTTCAATTTTATCG 59.303 38.462 0.00 0.00 0.00 2.92
99 100 6.198966 GGTGTCCATCATTTCAATTTTATCGC 59.801 38.462 0.00 0.00 0.00 4.58
100 101 6.751425 GTGTCCATCATTTCAATTTTATCGCA 59.249 34.615 0.00 0.00 0.00 5.10
101 102 7.275341 GTGTCCATCATTTCAATTTTATCGCAA 59.725 33.333 0.00 0.00 0.00 4.85
102 103 7.275341 TGTCCATCATTTCAATTTTATCGCAAC 59.725 33.333 0.00 0.00 0.00 4.17
103 104 7.489113 GTCCATCATTTCAATTTTATCGCAACT 59.511 33.333 0.00 0.00 0.00 3.16
104 105 8.034215 TCCATCATTTCAATTTTATCGCAACTT 58.966 29.630 0.00 0.00 0.00 2.66
105 106 9.299963 CCATCATTTCAATTTTATCGCAACTTA 57.700 29.630 0.00 0.00 0.00 2.24
113 114 9.906660 TCAATTTTATCGCAACTTATTTTCTGT 57.093 25.926 0.00 0.00 0.00 3.41
115 116 9.906660 AATTTTATCGCAACTTATTTTCTGTCA 57.093 25.926 0.00 0.00 0.00 3.58
116 117 8.722342 TTTTATCGCAACTTATTTTCTGTCAC 57.278 30.769 0.00 0.00 0.00 3.67
117 118 7.667043 TTATCGCAACTTATTTTCTGTCACT 57.333 32.000 0.00 0.00 0.00 3.41
118 119 8.766000 TTATCGCAACTTATTTTCTGTCACTA 57.234 30.769 0.00 0.00 0.00 2.74
119 120 7.667043 ATCGCAACTTATTTTCTGTCACTAA 57.333 32.000 0.00 0.00 0.00 2.24
120 121 7.485418 TCGCAACTTATTTTCTGTCACTAAA 57.515 32.000 0.00 0.00 0.00 1.85
121 122 7.921787 TCGCAACTTATTTTCTGTCACTAAAA 58.078 30.769 0.00 0.00 0.00 1.52
122 123 8.564574 TCGCAACTTATTTTCTGTCACTAAAAT 58.435 29.630 6.65 6.65 38.49 1.82
123 124 9.820229 CGCAACTTATTTTCTGTCACTAAAATA 57.180 29.630 5.16 5.16 36.80 1.40
133 134 9.500785 TTTCTGTCACTAAAATACATCATGTGA 57.499 29.630 0.00 0.00 0.00 3.58
134 135 9.671279 TTCTGTCACTAAAATACATCATGTGAT 57.329 29.630 0.00 0.00 35.79 3.06
142 143 2.681660 CATCATGTGATGTCGCGGT 58.318 52.632 6.13 0.00 45.10 5.68
143 144 1.009078 CATCATGTGATGTCGCGGTT 58.991 50.000 6.13 0.00 45.10 4.44
144 145 1.004610 CATCATGTGATGTCGCGGTTC 60.005 52.381 6.13 1.18 45.10 3.62
145 146 0.037790 TCATGTGATGTCGCGGTTCA 60.038 50.000 6.13 4.21 0.00 3.18
146 147 1.009078 CATGTGATGTCGCGGTTCAT 58.991 50.000 6.13 9.17 0.00 2.57
147 148 1.004610 CATGTGATGTCGCGGTTCATC 60.005 52.381 22.63 22.63 40.29 2.92
148 149 0.739462 TGTGATGTCGCGGTTCATCC 60.739 55.000 24.67 19.16 39.47 3.51
149 150 0.739462 GTGATGTCGCGGTTCATCCA 60.739 55.000 24.67 15.83 39.47 3.41
150 151 0.036858 TGATGTCGCGGTTCATCCAA 60.037 50.000 24.67 12.85 39.47 3.53
151 152 1.299541 GATGTCGCGGTTCATCCAAT 58.700 50.000 20.45 0.99 35.71 3.16
152 153 2.159028 TGATGTCGCGGTTCATCCAATA 60.159 45.455 24.67 12.13 39.47 1.90
153 154 2.613026 TGTCGCGGTTCATCCAATAT 57.387 45.000 6.13 0.00 35.57 1.28
154 155 2.209273 TGTCGCGGTTCATCCAATATG 58.791 47.619 6.13 0.00 35.57 1.78
155 156 2.210116 GTCGCGGTTCATCCAATATGT 58.790 47.619 6.13 0.00 35.57 2.29
156 157 2.612212 GTCGCGGTTCATCCAATATGTT 59.388 45.455 6.13 0.00 35.57 2.71
157 158 2.611751 TCGCGGTTCATCCAATATGTTG 59.388 45.455 6.13 0.00 35.57 3.33
158 159 2.611751 CGCGGTTCATCCAATATGTTGA 59.388 45.455 3.41 0.00 37.53 3.18
159 160 3.250762 CGCGGTTCATCCAATATGTTGAT 59.749 43.478 3.41 0.00 37.53 2.57
160 161 4.611355 CGCGGTTCATCCAATATGTTGATC 60.611 45.833 3.41 0.00 37.53 2.92
161 162 4.611355 GCGGTTCATCCAATATGTTGATCG 60.611 45.833 3.41 0.00 37.53 3.69
162 163 4.611355 CGGTTCATCCAATATGTTGATCGC 60.611 45.833 3.41 0.00 37.53 4.58
163 164 4.320494 GGTTCATCCAATATGTTGATCGCC 60.320 45.833 3.41 0.00 37.53 5.54
164 165 3.411446 TCATCCAATATGTTGATCGCCC 58.589 45.455 3.41 0.00 37.53 6.13
165 166 3.148412 CATCCAATATGTTGATCGCCCA 58.852 45.455 3.41 0.00 37.53 5.36
166 167 3.507162 TCCAATATGTTGATCGCCCAT 57.493 42.857 3.41 0.00 37.53 4.00
167 168 3.411446 TCCAATATGTTGATCGCCCATC 58.589 45.455 3.41 0.00 37.53 3.51
168 169 3.072915 TCCAATATGTTGATCGCCCATCT 59.927 43.478 3.41 0.00 37.53 2.90
169 170 3.189910 CCAATATGTTGATCGCCCATCTG 59.810 47.826 3.41 0.00 37.53 2.90
170 171 1.882912 TATGTTGATCGCCCATCTGC 58.117 50.000 0.00 0.00 31.92 4.26
171 172 0.820891 ATGTTGATCGCCCATCTGCC 60.821 55.000 0.00 0.00 31.92 4.85
172 173 1.153086 GTTGATCGCCCATCTGCCT 60.153 57.895 0.00 0.00 31.92 4.75
173 174 0.749454 GTTGATCGCCCATCTGCCTT 60.749 55.000 0.00 0.00 31.92 4.35
174 175 0.034186 TTGATCGCCCATCTGCCTTT 60.034 50.000 0.00 0.00 31.92 3.11
175 176 0.464373 TGATCGCCCATCTGCCTTTC 60.464 55.000 0.00 0.00 31.92 2.62
176 177 0.464373 GATCGCCCATCTGCCTTTCA 60.464 55.000 0.00 0.00 0.00 2.69
177 178 0.034186 ATCGCCCATCTGCCTTTCAA 60.034 50.000 0.00 0.00 0.00 2.69
178 179 0.960364 TCGCCCATCTGCCTTTCAAC 60.960 55.000 0.00 0.00 0.00 3.18
179 180 1.243342 CGCCCATCTGCCTTTCAACA 61.243 55.000 0.00 0.00 0.00 3.33
180 181 0.244721 GCCCATCTGCCTTTCAACAC 59.755 55.000 0.00 0.00 0.00 3.32
181 182 0.523072 CCCATCTGCCTTTCAACACG 59.477 55.000 0.00 0.00 0.00 4.49
182 183 1.238439 CCATCTGCCTTTCAACACGT 58.762 50.000 0.00 0.00 0.00 4.49
183 184 1.069022 CCATCTGCCTTTCAACACGTG 60.069 52.381 15.48 15.48 0.00 4.49
184 185 0.593128 ATCTGCCTTTCAACACGTGC 59.407 50.000 17.22 0.00 0.00 5.34
185 186 1.008538 CTGCCTTTCAACACGTGCC 60.009 57.895 17.22 0.00 0.00 5.01
186 187 2.335011 GCCTTTCAACACGTGCCC 59.665 61.111 17.22 0.00 0.00 5.36
187 188 3.039134 CCTTTCAACACGTGCCCC 58.961 61.111 17.22 0.00 0.00 5.80
233 234 1.448540 AATGAGACGCCCAAGCTCG 60.449 57.895 0.00 0.00 36.60 5.03
264 265 1.363744 CCTTGCTTGGCTACTCGAAG 58.636 55.000 0.00 0.00 34.15 3.79
284 285 6.015350 TCGAAGATGAAAGTTGTAGTTCTCCT 60.015 38.462 0.00 0.00 0.00 3.69
301 302 0.457035 CCTTCATGTTGATTGGGCGG 59.543 55.000 0.00 0.00 0.00 6.13
305 306 3.636929 ATGTTGATTGGGCGGGCGA 62.637 57.895 0.00 0.00 0.00 5.54
309 310 2.203209 GATTGGGCGGGCGAGATT 60.203 61.111 0.00 0.00 0.00 2.40
317 318 1.891060 GCGGGCGAGATTTGCGATAG 61.891 60.000 0.00 0.00 0.00 2.08
338 339 2.398498 CAAGCTATGCGCGTTCTATCT 58.602 47.619 7.78 0.00 45.59 1.98
358 359 9.778741 TCTATCTTTGTAGATCTTGTGTTGTTT 57.221 29.630 0.00 0.00 41.38 2.83
370 371 6.655062 TCTTGTGTTGTTTTCGATGTGATAC 58.345 36.000 0.00 0.00 0.00 2.24
379 388 6.811665 TGTTTTCGATGTGATACGATCTCTTT 59.188 34.615 0.00 0.00 38.30 2.52
387 396 6.561614 TGTGATACGATCTCTTTCTTGTACC 58.438 40.000 0.00 0.00 0.00 3.34
396 405 5.098663 TCTCTTTCTTGTACCCCCTTGTAT 58.901 41.667 0.00 0.00 0.00 2.29
407 416 1.379843 CCTTGTATTTGCCCGGCCT 60.380 57.895 7.03 0.00 0.00 5.19
434 443 6.238402 GCCGGGTTCTCTCTTAATAAATGTTC 60.238 42.308 2.18 0.00 0.00 3.18
582 606 5.323371 TCTTTTGCCCCAAGAAAATATCG 57.677 39.130 0.00 0.00 0.00 2.92
655 680 1.726533 CTAACCCCCTCTCGTCTCGC 61.727 65.000 0.00 0.00 0.00 5.03
699 725 0.721483 GAGGAAACGCGCAACTTTCG 60.721 55.000 5.73 0.00 0.00 3.46
893 1095 2.284699 CTCCGGACCCACCTCCTT 60.285 66.667 0.00 0.00 36.31 3.36
894 1096 2.284405 TCCGGACCCACCTCCTTC 60.284 66.667 0.00 0.00 36.31 3.46
896 1098 2.660064 CCGGACCCACCTCCTTCTG 61.660 68.421 0.00 0.00 36.31 3.02
996 1206 1.377202 TGACCCGCTGATTGCTTCC 60.377 57.895 0.00 0.00 40.11 3.46
1150 1360 5.690865 AGGTTTTTGGGATAATATGCTCGA 58.309 37.500 0.00 0.00 0.00 4.04
1198 1408 1.383664 TGGAGGCATGGGAGAGAGG 60.384 63.158 0.00 0.00 0.00 3.69
1200 1410 1.074926 GAGGCATGGGAGAGAGGGA 60.075 63.158 0.00 0.00 0.00 4.20
1240 1450 6.457528 GGCAGAAATTGTAGCTTCAGTGTATC 60.458 42.308 0.00 0.00 0.00 2.24
1327 1539 8.408601 GCCAGTATTCATTCTAATTGATTGTGT 58.591 33.333 0.00 0.00 0.00 3.72
1353 1565 8.185003 TCTTTCAGTTGATATTGTACACATCG 57.815 34.615 0.00 0.00 0.00 3.84
1354 1566 6.902224 TTCAGTTGATATTGTACACATCGG 57.098 37.500 0.00 0.00 0.00 4.18
1355 1567 6.215495 TCAGTTGATATTGTACACATCGGA 57.785 37.500 0.00 0.00 0.00 4.55
1356 1568 6.635755 TCAGTTGATATTGTACACATCGGAA 58.364 36.000 0.00 0.00 0.00 4.30
1357 1569 6.756542 TCAGTTGATATTGTACACATCGGAAG 59.243 38.462 0.00 0.00 0.00 3.46
1358 1570 6.018751 CAGTTGATATTGTACACATCGGAAGG 60.019 42.308 0.00 0.00 0.00 3.46
1359 1571 5.607939 TGATATTGTACACATCGGAAGGT 57.392 39.130 0.00 0.00 0.00 3.50
1375 1587 3.181448 GGAAGGTGGAAGGTAGTGTTGAA 60.181 47.826 0.00 0.00 0.00 2.69
1381 1593 2.548480 GGAAGGTAGTGTTGAACTGTGC 59.452 50.000 0.00 0.00 40.26 4.57
1437 1649 3.494924 CGCTGGGATGATCAACAAGGATA 60.495 47.826 0.00 0.00 0.00 2.59
1438 1650 4.660168 GCTGGGATGATCAACAAGGATAT 58.340 43.478 0.00 0.00 0.00 1.63
1466 1678 7.576477 GCTTTTAGATGAAGCACATTTCCTTCT 60.576 37.037 4.13 0.00 46.67 2.85
1477 1689 0.693049 TTTCCTTCTGACCTCCAGCC 59.307 55.000 0.00 0.00 42.62 4.85
1478 1690 1.201429 TTCCTTCTGACCTCCAGCCC 61.201 60.000 0.00 0.00 42.62 5.19
1524 1736 1.633774 ACCGATGGAGTATAGCCTGG 58.366 55.000 0.00 0.00 0.00 4.45
1525 1737 0.247736 CCGATGGAGTATAGCCTGGC 59.752 60.000 11.65 11.65 0.00 4.85
1708 1920 3.339713 AAATACTCCCTCCGTCCCATA 57.660 47.619 0.00 0.00 0.00 2.74
1797 2009 4.074970 ACCTGTGTGTGGAATCTCATTTC 58.925 43.478 0.00 0.00 0.00 2.17
1949 2164 2.783135 TCTGGATTCTGTTTCCTGCAC 58.217 47.619 0.00 0.00 34.17 4.57
1950 2165 2.106338 TCTGGATTCTGTTTCCTGCACA 59.894 45.455 0.00 0.00 34.17 4.57
1951 2166 2.486982 CTGGATTCTGTTTCCTGCACAG 59.513 50.000 0.00 0.00 42.74 3.66
1952 2167 2.158623 TGGATTCTGTTTCCTGCACAGT 60.159 45.455 1.67 0.00 42.12 3.55
1953 2168 2.227388 GGATTCTGTTTCCTGCACAGTG 59.773 50.000 0.00 0.00 42.12 3.66
1954 2169 1.024271 TTCTGTTTCCTGCACAGTGC 58.976 50.000 19.37 19.37 45.29 4.40
2316 2533 3.441572 AGCCATTATGCTTGTCAACACTC 59.558 43.478 0.00 0.00 38.85 3.51
2317 2534 3.441572 GCCATTATGCTTGTCAACACTCT 59.558 43.478 0.00 0.00 0.00 3.24
2482 2699 8.000780 AGACTGCACTTCTTTCATTTTAAGTT 57.999 30.769 0.00 0.00 29.93 2.66
2805 3054 5.272405 AGACAGGGACGGGATAGTATTAT 57.728 43.478 0.00 0.00 0.00 1.28
2814 3066 5.497474 ACGGGATAGTATTATTGCCCATTC 58.503 41.667 0.00 0.00 35.26 2.67
2855 3107 2.808543 CCTTATATGCGGGCTCTGAAAC 59.191 50.000 0.00 0.00 0.00 2.78
3075 3332 2.286121 ACGGTGATGGGGATGGGT 60.286 61.111 0.00 0.00 0.00 4.51
3201 3459 1.682854 CACCTTGTCAGCCACAATTGT 59.317 47.619 4.92 4.92 44.32 2.71
3202 3460 1.956477 ACCTTGTCAGCCACAATTGTC 59.044 47.619 8.48 0.00 44.32 3.18
3203 3461 2.233271 CCTTGTCAGCCACAATTGTCT 58.767 47.619 8.48 0.47 44.32 3.41
3204 3462 3.181445 ACCTTGTCAGCCACAATTGTCTA 60.181 43.478 8.48 0.00 44.32 2.59
3205 3463 4.012374 CCTTGTCAGCCACAATTGTCTAT 58.988 43.478 8.48 0.00 44.32 1.98
3946 4222 6.268847 GTCATCCAGTCTATAAGAGGGTGAAT 59.731 42.308 0.00 0.00 0.00 2.57
3997 4273 2.994186 ACGAGTACACCAAACCTGTT 57.006 45.000 0.00 0.00 0.00 3.16
4215 4493 8.684386 TTATTTGTTCAACCTTGACTGTATGA 57.316 30.769 0.00 0.00 36.83 2.15
4319 4600 8.801299 TGATTATCTATTCCTGTTGTTGCAAAA 58.199 29.630 0.00 0.00 0.00 2.44
4847 5129 2.624838 CTCTTTGCCTTGCTCTGGAAAA 59.375 45.455 0.00 0.00 31.71 2.29
4980 5265 4.913335 CATTGATGGAGCATGTTAGCTT 57.087 40.909 0.00 0.00 46.75 3.74
5183 5468 2.736144 TACTTGAACGATGCGAAGGT 57.264 45.000 0.00 0.00 0.00 3.50
5755 6042 1.614413 GGTAAGCTCATACTCCCTCCG 59.386 57.143 0.00 0.00 0.00 4.63
5774 6061 6.260271 CCCTCCGTTCCTAAATATTTGTCTTC 59.740 42.308 11.05 0.00 0.00 2.87
5775 6062 6.260271 CCTCCGTTCCTAAATATTTGTCTTCC 59.740 42.308 11.05 0.00 0.00 3.46
5780 6067 9.250624 CGTTCCTAAATATTTGTCTTCCTAGAG 57.749 37.037 11.05 0.00 0.00 2.43
5793 6080 6.931281 TGTCTTCCTAGAGATTTCAACAAGTG 59.069 38.462 0.00 0.00 0.00 3.16
5806 6093 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
5821 6108 6.913170 ACATACGAAGCAAAATGAGTGAATT 58.087 32.000 0.00 0.00 0.00 2.17
5822 6109 6.803320 ACATACGAAGCAAAATGAGTGAATTG 59.197 34.615 0.00 0.00 0.00 2.32
5873 6160 5.163794 CCGTATGTGGTAGTCCATTTGAAAC 60.164 44.000 0.00 0.00 46.20 2.78
5879 6166 5.642491 GTGGTAGTCCATTTGAAACCTCTAC 59.358 44.000 0.00 0.00 46.20 2.59
6140 6427 6.531594 TCAAGCTTACAGAGTAAATCATGTCG 59.468 38.462 0.00 0.00 0.00 4.35
6487 6774 6.003950 AGCAATTTGTTGAGTATGTGGTAGT 58.996 36.000 0.00 0.00 0.00 2.73
6569 6857 0.463295 ATGATCGGGCTGCACTCAAG 60.463 55.000 0.00 0.00 0.00 3.02
6597 6892 6.668541 TCAAAGTGCATATAAAGTGCTCTC 57.331 37.500 0.00 0.00 43.31 3.20
6598 6893 5.586243 TCAAAGTGCATATAAAGTGCTCTCC 59.414 40.000 0.00 0.00 43.31 3.71
6663 6965 7.343057 TCTGTTGATAGATGAAGTGATACACCT 59.657 37.037 0.00 0.00 34.49 4.00
6674 6976 6.260050 TGAAGTGATACACCTGTTTTTGTCTC 59.740 38.462 0.00 0.00 34.49 3.36
6682 6984 7.272037 ACACCTGTTTTTGTCTCGAATTATT 57.728 32.000 0.00 0.00 0.00 1.40
6848 7150 2.316792 TCTTCGCTCTTTCTTCGTTCG 58.683 47.619 0.00 0.00 0.00 3.95
6858 7160 3.536956 TTCTTCGTTCGGATTAGCCAT 57.463 42.857 0.00 0.00 35.94 4.40
6871 7173 2.423382 TAGCCATTGCCACTGGTGCA 62.423 55.000 2.80 0.00 38.69 4.57
6917 7219 0.321653 ATGTTCCAAGTCTCACCGCC 60.322 55.000 0.00 0.00 0.00 6.13
6989 7291 1.281867 CTAATGACAGCCAACCTCCCA 59.718 52.381 0.00 0.00 0.00 4.37
6998 7300 0.478507 CCAACCTCCCAGTTTCCTGT 59.521 55.000 0.00 0.00 36.95 4.00
7002 7304 1.296715 CTCCCAGTTTCCTGTCCCG 59.703 63.158 0.00 0.00 36.95 5.14
7036 7338 7.145323 TGATGATGTGTATCTAATGTGTACGG 58.855 38.462 0.00 0.00 34.31 4.02
7040 7342 5.286438 TGTGTATCTAATGTGTACGGCATC 58.714 41.667 3.66 0.00 0.00 3.91
7129 7432 0.603569 TGTTCTGAGTCGGAGAAGCC 59.396 55.000 1.08 0.00 39.69 4.35
7130 7433 0.603569 GTTCTGAGTCGGAGAAGCCA 59.396 55.000 1.08 0.00 39.69 4.75
7148 7451 2.825205 CCAGAGGCACCAAACAAAAAG 58.175 47.619 0.00 0.00 0.00 2.27
7164 7467 8.534778 CAAACAAAAAGTGCTGATTACTCTTTC 58.465 33.333 0.00 0.00 0.00 2.62
7228 7532 4.640647 GGGAAGGAACCACATTTGAGTATC 59.359 45.833 0.00 0.00 0.00 2.24
7285 7589 1.001764 TGAGTGCCATCTTGCTGGG 60.002 57.895 0.00 0.00 36.75 4.45
7304 7838 1.480545 GGTGCTGGTGAAAGGTTTTGT 59.519 47.619 0.00 0.00 0.00 2.83
7307 7841 2.093764 TGCTGGTGAAAGGTTTTGTTGG 60.094 45.455 0.00 0.00 0.00 3.77
7316 7850 7.766738 GGTGAAAGGTTTTGTTGGAATAAAAGA 59.233 33.333 0.00 0.00 31.15 2.52
7323 7857 8.272866 GGTTTTGTTGGAATAAAAGACATTTCG 58.727 33.333 0.00 0.00 31.15 3.46
7332 7866 7.148804 GGAATAAAAGACATTTCGTTTCCAAGC 60.149 37.037 0.00 0.00 36.10 4.01
7333 7867 2.969443 AGACATTTCGTTTCCAAGCG 57.031 45.000 0.00 0.00 0.00 4.68
7341 7880 1.595794 TCGTTTCCAAGCGTTGAAGTC 59.404 47.619 0.00 0.00 34.14 3.01
7359 7898 6.298361 TGAAGTCCAGAGACATTTCATTTCA 58.702 36.000 0.00 0.00 46.15 2.69
7361 7900 7.449395 TGAAGTCCAGAGACATTTCATTTCATT 59.551 33.333 0.00 0.00 46.15 2.57
7400 7957 1.079543 ATGAGTGCGTGACAGCCTC 60.080 57.895 9.20 9.20 36.03 4.70
7403 7960 1.287730 GAGTGCGTGACAGCCTCAAG 61.288 60.000 10.38 0.00 35.75 3.02
7409 7966 0.673022 GTGACAGCCTCAAGCCTCTG 60.673 60.000 0.00 0.00 45.47 3.35
7410 7967 1.744741 GACAGCCTCAAGCCTCTGC 60.745 63.158 0.00 0.00 45.47 4.26
7424 7981 1.134068 CCTCTGCTACCCCTTTTAGGC 60.134 57.143 0.00 0.00 32.73 3.93
7425 7982 1.840635 CTCTGCTACCCCTTTTAGGCT 59.159 52.381 0.00 0.00 32.73 4.58
7426 7983 1.559682 TCTGCTACCCCTTTTAGGCTG 59.440 52.381 0.00 0.00 32.73 4.85
7427 7984 1.559682 CTGCTACCCCTTTTAGGCTGA 59.440 52.381 0.00 0.00 32.73 4.26
7428 7985 2.173569 CTGCTACCCCTTTTAGGCTGAT 59.826 50.000 0.00 0.00 32.73 2.90
7429 7986 2.092429 TGCTACCCCTTTTAGGCTGATG 60.092 50.000 0.00 0.00 32.73 3.07
7430 7987 2.172717 GCTACCCCTTTTAGGCTGATGA 59.827 50.000 0.00 0.00 32.73 2.92
7431 7988 3.181439 GCTACCCCTTTTAGGCTGATGAT 60.181 47.826 0.00 0.00 32.73 2.45
7432 7989 3.584733 ACCCCTTTTAGGCTGATGATC 57.415 47.619 0.00 0.00 32.73 2.92
7459 8016 0.179000 AATAGGCTGTCGCTTCCCTG 59.821 55.000 0.00 0.00 36.09 4.45
7475 8032 2.711009 TCCCTGATCACCTGTCTGTTTT 59.289 45.455 0.00 0.00 0.00 2.43
7476 8033 3.077359 CCCTGATCACCTGTCTGTTTTC 58.923 50.000 0.00 0.00 0.00 2.29
7533 8104 2.360600 TGTGGTATGTTGGGCGCC 60.361 61.111 21.18 21.18 0.00 6.53
7534 8105 3.138128 GTGGTATGTTGGGCGCCC 61.138 66.667 39.40 39.40 0.00 6.13
7535 8106 4.434354 TGGTATGTTGGGCGCCCC 62.434 66.667 41.75 27.90 45.71 5.80
7536 8107 4.123545 GGTATGTTGGGCGCCCCT 62.124 66.667 41.75 25.15 45.70 4.79
7537 8108 2.516225 GTATGTTGGGCGCCCCTC 60.516 66.667 41.75 31.96 45.70 4.30
7538 8109 4.169696 TATGTTGGGCGCCCCTCG 62.170 66.667 41.75 0.00 45.70 4.63
7549 8120 1.369625 CGCCCCTCGGATATTATTGC 58.630 55.000 0.00 0.00 33.78 3.56
7567 8138 1.077930 CTGTGTCCATCCCAGCCAG 60.078 63.158 0.00 0.00 0.00 4.85
7568 8139 2.439156 GTGTCCATCCCAGCCAGC 60.439 66.667 0.00 0.00 0.00 4.85
7569 8140 3.731728 TGTCCATCCCAGCCAGCC 61.732 66.667 0.00 0.00 0.00 4.85
7570 8141 3.731728 GTCCATCCCAGCCAGCCA 61.732 66.667 0.00 0.00 0.00 4.75
7571 8142 3.414193 TCCATCCCAGCCAGCCAG 61.414 66.667 0.00 0.00 0.00 4.85
7572 8143 3.414193 CCATCCCAGCCAGCCAGA 61.414 66.667 0.00 0.00 0.00 3.86
7575 8146 1.385631 ATCCCAGCCAGCCAGATCT 60.386 57.895 0.00 0.00 0.00 2.75
7576 8147 0.992431 ATCCCAGCCAGCCAGATCTT 60.992 55.000 0.00 0.00 0.00 2.40
7577 8148 1.210204 TCCCAGCCAGCCAGATCTTT 61.210 55.000 0.00 0.00 0.00 2.52
7578 8149 0.750911 CCCAGCCAGCCAGATCTTTC 60.751 60.000 0.00 0.00 0.00 2.62
7579 8150 0.255318 CCAGCCAGCCAGATCTTTCT 59.745 55.000 0.00 0.00 0.00 2.52
7581 8152 0.394080 AGCCAGCCAGATCTTTCTGC 60.394 55.000 13.11 9.77 46.76 4.26
7582 8153 1.382692 GCCAGCCAGATCTTTCTGCC 61.383 60.000 13.11 1.93 46.76 4.85
7583 8154 0.034767 CCAGCCAGATCTTTCTGCCA 60.035 55.000 13.11 0.00 46.76 4.92
7584 8155 1.380524 CAGCCAGATCTTTCTGCCAG 58.619 55.000 7.76 0.00 46.76 4.85
7585 8156 0.255318 AGCCAGATCTTTCTGCCAGG 59.745 55.000 0.00 0.00 46.76 4.45
7595 8166 2.599578 CTGCCAGGTGCCAGCTTT 60.600 61.111 0.00 0.00 40.16 3.51
7604 8175 3.189287 CAGGTGCCAGCTTTGTAAACTAG 59.811 47.826 0.00 0.00 0.00 2.57
7606 8177 1.804151 TGCCAGCTTTGTAAACTAGCG 59.196 47.619 0.00 0.00 39.82 4.26
7608 8179 2.695359 CCAGCTTTGTAAACTAGCGGA 58.305 47.619 0.00 0.00 39.82 5.54
7611 8182 4.023536 CCAGCTTTGTAAACTAGCGGAAAA 60.024 41.667 0.00 0.00 39.82 2.29
7623 8194 6.290294 ACTAGCGGAAAACTATCCAAAGTA 57.710 37.500 0.00 0.00 39.61 2.24
7624 8195 6.704310 ACTAGCGGAAAACTATCCAAAGTAA 58.296 36.000 0.00 0.00 39.61 2.24
7629 8200 6.541278 GCGGAAAACTATCCAAAGTAATAGGT 59.459 38.462 0.00 0.00 39.61 3.08
7633 8204 9.227777 GAAAACTATCCAAAGTAATAGGTGTGT 57.772 33.333 0.00 0.00 31.11 3.72
7634 8205 8.561738 AAACTATCCAAAGTAATAGGTGTGTG 57.438 34.615 0.00 0.00 31.11 3.82
7635 8206 6.113411 ACTATCCAAAGTAATAGGTGTGTGC 58.887 40.000 0.00 0.00 31.11 4.57
7636 8207 4.359434 TCCAAAGTAATAGGTGTGTGCA 57.641 40.909 0.00 0.00 0.00 4.57
7648 8219 1.596603 TGTGTGCATTCACTCACCAG 58.403 50.000 8.70 0.00 43.49 4.00
7649 8220 1.134128 TGTGTGCATTCACTCACCAGT 60.134 47.619 8.70 0.00 43.49 4.00
7651 8222 1.948834 TGTGCATTCACTCACCAGTTG 59.051 47.619 0.00 0.00 43.49 3.16
7652 8223 0.953727 TGCATTCACTCACCAGTTGC 59.046 50.000 0.00 0.00 35.32 4.17
7653 8224 1.242076 GCATTCACTCACCAGTTGCT 58.758 50.000 0.00 0.00 32.98 3.91
7654 8225 1.068748 GCATTCACTCACCAGTTGCTG 60.069 52.381 0.00 0.00 32.98 4.41
7655 8226 1.068748 CATTCACTCACCAGTTGCTGC 60.069 52.381 0.00 0.00 0.00 5.25
7656 8227 0.107263 TTCACTCACCAGTTGCTGCA 60.107 50.000 0.00 0.00 0.00 4.41
7658 8229 0.520404 CACTCACCAGTTGCTGCATC 59.480 55.000 1.84 2.22 0.00 3.91
7661 8232 2.281692 ACCAGTTGCTGCATCGCA 60.282 55.556 1.84 0.00 38.31 5.10
7662 8233 1.676635 ACCAGTTGCTGCATCGCAT 60.677 52.632 1.84 0.00 40.04 4.73
7663 8234 1.063649 CCAGTTGCTGCATCGCATC 59.936 57.895 1.84 1.40 40.04 3.91
7664 8235 1.297378 CAGTTGCTGCATCGCATCG 60.297 57.895 1.84 0.00 40.04 3.84
7665 8236 1.448365 AGTTGCTGCATCGCATCGA 60.448 52.632 1.84 0.00 40.04 3.59
7666 8237 1.020861 AGTTGCTGCATCGCATCGAA 61.021 50.000 1.84 0.00 39.99 3.71
7667 8238 0.179192 GTTGCTGCATCGCATCGAAA 60.179 50.000 1.84 0.00 39.99 3.46
7668 8239 0.734309 TTGCTGCATCGCATCGAAAT 59.266 45.000 1.84 0.00 39.99 2.17
7669 8240 0.028374 TGCTGCATCGCATCGAAATG 59.972 50.000 0.00 0.00 39.99 2.32
7677 8248 4.676444 CATCGAAATGCACTGCGG 57.324 55.556 0.00 0.00 0.00 5.69
7678 8249 1.796151 CATCGAAATGCACTGCGGT 59.204 52.632 0.00 0.00 0.00 5.68
7679 8250 0.521867 CATCGAAATGCACTGCGGTG 60.522 55.000 21.79 21.79 45.53 4.94
7680 8251 0.955428 ATCGAAATGCACTGCGGTGT 60.955 50.000 26.00 6.89 44.65 4.16
7681 8252 1.440850 CGAAATGCACTGCGGTGTG 60.441 57.895 26.00 13.05 44.65 3.82
7682 8253 1.840630 CGAAATGCACTGCGGTGTGA 61.841 55.000 26.00 14.04 44.65 3.58
7683 8254 0.523072 GAAATGCACTGCGGTGTGAT 59.477 50.000 26.00 15.63 44.65 3.06
7684 8255 1.737236 GAAATGCACTGCGGTGTGATA 59.263 47.619 26.00 11.32 44.65 2.15
7685 8256 2.042686 AATGCACTGCGGTGTGATAT 57.957 45.000 26.00 12.97 44.65 1.63
7686 8257 1.586422 ATGCACTGCGGTGTGATATC 58.414 50.000 26.00 9.44 44.65 1.63
7687 8258 0.536724 TGCACTGCGGTGTGATATCT 59.463 50.000 26.00 0.00 44.65 1.98
7688 8259 1.212616 GCACTGCGGTGTGATATCTC 58.787 55.000 26.00 3.78 44.65 2.75
7689 8260 1.481240 CACTGCGGTGTGATATCTCG 58.519 55.000 17.96 4.45 40.12 4.04
7690 8261 0.249073 ACTGCGGTGTGATATCTCGC 60.249 55.000 18.77 18.77 45.60 5.03
7691 8262 0.941463 CTGCGGTGTGATATCTCGCC 60.941 60.000 22.08 22.08 44.91 5.54
7692 8263 1.067416 GCGGTGTGATATCTCGCCA 59.933 57.895 27.98 8.84 39.30 5.69
7693 8264 0.941463 GCGGTGTGATATCTCGCCAG 60.941 60.000 27.98 22.29 39.30 4.85
7694 8265 0.385751 CGGTGTGATATCTCGCCAGT 59.614 55.000 27.98 0.00 39.30 4.00
7695 8266 1.600663 CGGTGTGATATCTCGCCAGTC 60.601 57.143 27.98 9.25 39.30 3.51
7696 8267 1.600663 GGTGTGATATCTCGCCAGTCG 60.601 57.143 25.42 0.00 39.19 4.18
7697 8268 0.030773 TGTGATATCTCGCCAGTCGC 59.969 55.000 3.98 0.00 38.27 5.19
7698 8269 0.312416 GTGATATCTCGCCAGTCGCT 59.688 55.000 3.98 0.00 38.27 4.93
7699 8270 0.312102 TGATATCTCGCCAGTCGCTG 59.688 55.000 3.98 0.52 38.27 5.18
7700 8271 1.006314 GATATCTCGCCAGTCGCTGC 61.006 60.000 0.00 0.00 38.27 5.25
7701 8272 2.739523 ATATCTCGCCAGTCGCTGCG 62.740 60.000 17.25 17.25 38.27 5.18
7707 8278 3.753434 CCAGTCGCTGCGTCTCCT 61.753 66.667 22.48 10.71 0.00 3.69
7708 8279 2.202544 CAGTCGCTGCGTCTCCTC 60.203 66.667 22.48 6.91 0.00 3.71
7709 8280 3.805307 AGTCGCTGCGTCTCCTCG 61.805 66.667 22.48 0.00 0.00 4.63
7710 8281 4.104417 GTCGCTGCGTCTCCTCGT 62.104 66.667 22.48 0.00 0.00 4.18
7711 8282 4.103103 TCGCTGCGTCTCCTCGTG 62.103 66.667 22.48 0.00 0.00 4.35
7713 8284 3.749064 GCTGCGTCTCCTCGTGGA 61.749 66.667 6.00 6.00 40.69 4.02
7714 8285 2.179517 CTGCGTCTCCTCGTGGAC 59.820 66.667 1.10 0.00 37.46 4.02
7717 8288 3.733960 CGTCTCCTCGTGGACGCA 61.734 66.667 1.10 0.00 46.23 5.24
7718 8289 2.126424 GTCTCCTCGTGGACGCAC 60.126 66.667 1.10 0.00 37.46 5.34
7719 8290 3.371063 TCTCCTCGTGGACGCACC 61.371 66.667 1.10 0.00 37.46 5.01
7720 8291 4.778415 CTCCTCGTGGACGCACCG 62.778 72.222 1.10 0.00 42.61 4.94
7733 8304 3.032609 CACCGCGCCGATCTGATC 61.033 66.667 0.00 7.60 0.00 2.92
7734 8305 3.219928 ACCGCGCCGATCTGATCT 61.220 61.111 15.16 0.00 0.00 2.75
7735 8306 2.732468 CCGCGCCGATCTGATCTG 60.732 66.667 15.16 10.05 0.00 2.90
7736 8307 2.332869 CGCGCCGATCTGATCTGA 59.667 61.111 15.16 4.63 0.00 3.27
7737 8308 1.080907 CGCGCCGATCTGATCTGAT 60.081 57.895 14.33 14.33 0.00 2.90
7738 8309 1.069924 CGCGCCGATCTGATCTGATC 61.070 60.000 25.11 25.11 39.40 2.92
7739 8310 0.243365 GCGCCGATCTGATCTGATCT 59.757 55.000 29.14 7.96 40.32 2.75
7740 8311 1.979897 CGCCGATCTGATCTGATCTG 58.020 55.000 29.14 25.50 40.32 2.90
7741 8312 1.269174 CGCCGATCTGATCTGATCTGT 59.731 52.381 29.14 7.01 40.32 3.41
7742 8313 2.288091 CGCCGATCTGATCTGATCTGTT 60.288 50.000 29.14 12.36 40.32 3.16
7743 8314 3.316283 GCCGATCTGATCTGATCTGTTC 58.684 50.000 29.14 18.11 40.32 3.18
7744 8315 3.860378 GCCGATCTGATCTGATCTGTTCC 60.860 52.174 29.14 13.97 40.32 3.62
7745 8316 3.573538 CCGATCTGATCTGATCTGTTCCT 59.426 47.826 29.14 4.78 40.32 3.36
7746 8317 4.039004 CCGATCTGATCTGATCTGTTCCTT 59.961 45.833 29.14 4.15 40.32 3.36
7747 8318 5.453057 CCGATCTGATCTGATCTGTTCCTTT 60.453 44.000 29.14 3.52 40.32 3.11
7748 8319 5.462729 CGATCTGATCTGATCTGTTCCTTTG 59.537 44.000 29.14 13.99 40.32 2.77
7749 8320 4.511527 TCTGATCTGATCTGTTCCTTTGC 58.488 43.478 17.82 0.00 0.00 3.68
7750 8321 4.019950 TCTGATCTGATCTGTTCCTTTGCA 60.020 41.667 17.82 0.00 0.00 4.08
7751 8322 4.259356 TGATCTGATCTGTTCCTTTGCAG 58.741 43.478 17.82 0.00 0.00 4.41
7752 8323 4.019950 TGATCTGATCTGTTCCTTTGCAGA 60.020 41.667 17.82 0.00 44.55 4.26
7753 8324 4.356405 TCTGATCTGTTCCTTTGCAGAA 57.644 40.909 0.00 0.00 43.79 3.02
7754 8325 4.717877 TCTGATCTGTTCCTTTGCAGAAA 58.282 39.130 0.00 0.00 43.79 2.52
7755 8326 4.758674 TCTGATCTGTTCCTTTGCAGAAAG 59.241 41.667 0.00 0.00 43.79 2.62
7767 8338 6.966435 CTTTGCAGAAAGGTTCAAAAAGAA 57.034 33.333 0.00 0.00 35.78 2.52
7768 8339 7.363205 CTTTGCAGAAAGGTTCAAAAAGAAA 57.637 32.000 0.00 0.00 35.78 2.52
7769 8340 6.966435 TTGCAGAAAGGTTCAAAAAGAAAG 57.034 33.333 0.00 0.00 38.13 2.62
7770 8341 5.418676 TGCAGAAAGGTTCAAAAAGAAAGG 58.581 37.500 0.00 0.00 38.13 3.11
7771 8342 5.046663 TGCAGAAAGGTTCAAAAAGAAAGGT 60.047 36.000 0.00 0.00 38.13 3.50
7772 8343 5.291858 GCAGAAAGGTTCAAAAAGAAAGGTG 59.708 40.000 0.00 0.00 38.13 4.00
7773 8344 5.291858 CAGAAAGGTTCAAAAAGAAAGGTGC 59.708 40.000 0.00 0.00 38.13 5.01
7774 8345 4.817318 AAGGTTCAAAAAGAAAGGTGCA 57.183 36.364 0.00 0.00 38.13 4.57
7775 8346 5.357742 AAGGTTCAAAAAGAAAGGTGCAT 57.642 34.783 0.00 0.00 38.13 3.96
7776 8347 4.696455 AGGTTCAAAAAGAAAGGTGCATG 58.304 39.130 0.00 0.00 38.13 4.06
7777 8348 3.248363 GGTTCAAAAAGAAAGGTGCATGC 59.752 43.478 11.82 11.82 38.13 4.06
7778 8349 2.741612 TCAAAAAGAAAGGTGCATGCG 58.258 42.857 14.09 0.00 0.00 4.73
7779 8350 2.360483 TCAAAAAGAAAGGTGCATGCGA 59.640 40.909 14.09 0.00 0.00 5.10
7780 8351 3.005684 TCAAAAAGAAAGGTGCATGCGAT 59.994 39.130 14.09 0.00 0.00 4.58
7781 8352 2.642139 AAAGAAAGGTGCATGCGATG 57.358 45.000 14.09 0.00 0.00 3.84
7804 8375 2.740055 GCAGAGCGAGTGGTGTGG 60.740 66.667 0.00 0.00 37.35 4.17
7805 8376 2.740055 CAGAGCGAGTGGTGTGGC 60.740 66.667 0.00 0.00 33.57 5.01
7806 8377 4.363990 AGAGCGAGTGGTGTGGCG 62.364 66.667 0.00 0.00 0.00 5.69
7807 8378 4.664677 GAGCGAGTGGTGTGGCGT 62.665 66.667 0.00 0.00 0.00 5.68
7808 8379 4.969196 AGCGAGTGGTGTGGCGTG 62.969 66.667 0.00 0.00 0.00 5.34
7809 8380 4.961511 GCGAGTGGTGTGGCGTGA 62.962 66.667 0.00 0.00 0.00 4.35
7810 8381 2.048222 CGAGTGGTGTGGCGTGAT 60.048 61.111 0.00 0.00 0.00 3.06
7811 8382 2.382746 CGAGTGGTGTGGCGTGATG 61.383 63.158 0.00 0.00 0.00 3.07
7812 8383 1.301716 GAGTGGTGTGGCGTGATGT 60.302 57.895 0.00 0.00 0.00 3.06
7813 8384 0.037697 GAGTGGTGTGGCGTGATGTA 60.038 55.000 0.00 0.00 0.00 2.29
7814 8385 0.320421 AGTGGTGTGGCGTGATGTAC 60.320 55.000 0.00 0.00 0.00 2.90
7815 8386 1.004320 TGGTGTGGCGTGATGTACC 60.004 57.895 0.00 0.00 0.00 3.34
7816 8387 2.098233 GGTGTGGCGTGATGTACCG 61.098 63.158 0.00 0.00 0.00 4.02
7817 8388 1.373748 GTGTGGCGTGATGTACCGT 60.374 57.895 0.00 0.00 0.00 4.83
7818 8389 1.373622 TGTGGCGTGATGTACCGTG 60.374 57.895 0.00 0.00 0.00 4.94
7819 8390 1.373748 GTGGCGTGATGTACCGTGT 60.374 57.895 0.00 0.00 0.00 4.49
7820 8391 1.080366 TGGCGTGATGTACCGTGTC 60.080 57.895 0.00 0.00 0.00 3.67
7821 8392 1.808390 GGCGTGATGTACCGTGTCC 60.808 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.333423 GGGAAATAAAAAGAGTTTGGGTTATGC 59.667 37.037 0.00 0.00 0.00 3.14
1 2 8.371699 TGGGAAATAAAAAGAGTTTGGGTTATG 58.628 33.333 0.00 0.00 0.00 1.90
2 3 8.499288 TGGGAAATAAAAAGAGTTTGGGTTAT 57.501 30.769 0.00 0.00 0.00 1.89
3 4 7.916077 TGGGAAATAAAAAGAGTTTGGGTTA 57.084 32.000 0.00 0.00 0.00 2.85
4 5 6.816616 TGGGAAATAAAAAGAGTTTGGGTT 57.183 33.333 0.00 0.00 0.00 4.11
5 6 6.816616 TTGGGAAATAAAAAGAGTTTGGGT 57.183 33.333 0.00 0.00 0.00 4.51
6 7 7.279615 ACTTTGGGAAATAAAAAGAGTTTGGG 58.720 34.615 1.67 0.00 35.39 4.12
7 8 9.996554 ATACTTTGGGAAATAAAAAGAGTTTGG 57.003 29.630 1.67 0.00 35.39 3.28
10 11 9.489084 GCAATACTTTGGGAAATAAAAAGAGTT 57.511 29.630 1.67 0.00 35.39 3.01
11 12 8.646900 TGCAATACTTTGGGAAATAAAAAGAGT 58.353 29.630 1.67 0.00 35.39 3.24
12 13 9.487790 TTGCAATACTTTGGGAAATAAAAAGAG 57.512 29.630 0.00 0.00 35.39 2.85
13 14 9.487790 CTTGCAATACTTTGGGAAATAAAAAGA 57.512 29.630 0.00 0.00 35.39 2.52
14 15 8.720562 CCTTGCAATACTTTGGGAAATAAAAAG 58.279 33.333 0.00 0.00 37.04 2.27
15 16 8.432805 TCCTTGCAATACTTTGGGAAATAAAAA 58.567 29.630 0.00 0.00 33.22 1.94
16 17 7.967908 TCCTTGCAATACTTTGGGAAATAAAA 58.032 30.769 0.00 0.00 33.22 1.52
17 18 7.546250 TCCTTGCAATACTTTGGGAAATAAA 57.454 32.000 0.00 0.00 33.22 1.40
18 19 7.453126 TCTTCCTTGCAATACTTTGGGAAATAA 59.547 33.333 13.23 2.65 33.23 1.40
19 20 6.951198 TCTTCCTTGCAATACTTTGGGAAATA 59.049 34.615 13.23 4.54 33.23 1.40
20 21 5.779771 TCTTCCTTGCAATACTTTGGGAAAT 59.220 36.000 13.23 0.00 33.23 2.17
21 22 5.144100 TCTTCCTTGCAATACTTTGGGAAA 58.856 37.500 13.23 4.68 33.23 3.13
22 23 4.735369 TCTTCCTTGCAATACTTTGGGAA 58.265 39.130 12.06 12.06 32.86 3.97
23 24 4.335416 CTCTTCCTTGCAATACTTTGGGA 58.665 43.478 0.00 0.00 33.22 4.37
24 25 3.119352 GCTCTTCCTTGCAATACTTTGGG 60.119 47.826 0.00 0.00 33.22 4.12
25 26 3.426695 CGCTCTTCCTTGCAATACTTTGG 60.427 47.826 0.00 0.00 33.22 3.28
26 27 3.751621 CGCTCTTCCTTGCAATACTTTG 58.248 45.455 0.00 0.00 35.85 2.77
27 28 2.162408 GCGCTCTTCCTTGCAATACTTT 59.838 45.455 0.00 0.00 0.00 2.66
28 29 1.740025 GCGCTCTTCCTTGCAATACTT 59.260 47.619 0.00 0.00 0.00 2.24
29 30 1.373570 GCGCTCTTCCTTGCAATACT 58.626 50.000 0.00 0.00 0.00 2.12
30 31 0.378610 GGCGCTCTTCCTTGCAATAC 59.621 55.000 7.64 0.00 0.00 1.89
31 32 0.035534 TGGCGCTCTTCCTTGCAATA 60.036 50.000 7.64 0.00 0.00 1.90
32 33 0.895100 TTGGCGCTCTTCCTTGCAAT 60.895 50.000 7.64 0.00 0.00 3.56
33 34 0.895100 ATTGGCGCTCTTCCTTGCAA 60.895 50.000 7.64 0.00 0.00 4.08
34 35 0.895100 AATTGGCGCTCTTCCTTGCA 60.895 50.000 7.64 0.00 0.00 4.08
35 36 0.457337 CAATTGGCGCTCTTCCTTGC 60.457 55.000 7.64 0.00 0.00 4.01
36 37 1.167851 TCAATTGGCGCTCTTCCTTG 58.832 50.000 7.64 3.50 0.00 3.61
37 38 2.134789 ATCAATTGGCGCTCTTCCTT 57.865 45.000 7.64 0.00 0.00 3.36
38 39 2.019984 GAATCAATTGGCGCTCTTCCT 58.980 47.619 7.64 0.00 0.00 3.36
39 40 1.066152 GGAATCAATTGGCGCTCTTCC 59.934 52.381 7.64 5.93 0.00 3.46
40 41 2.019984 AGGAATCAATTGGCGCTCTTC 58.980 47.619 7.64 0.29 0.00 2.87
41 42 2.134789 AGGAATCAATTGGCGCTCTT 57.865 45.000 7.64 0.00 0.00 2.85
42 43 2.435805 TCTAGGAATCAATTGGCGCTCT 59.564 45.455 7.64 0.68 0.00 4.09
43 44 2.838736 TCTAGGAATCAATTGGCGCTC 58.161 47.619 7.64 0.00 0.00 5.03
44 45 3.209410 CTTCTAGGAATCAATTGGCGCT 58.791 45.455 7.64 0.00 0.00 5.92
45 46 2.287248 GCTTCTAGGAATCAATTGGCGC 60.287 50.000 5.42 0.00 0.00 6.53
46 47 3.209410 AGCTTCTAGGAATCAATTGGCG 58.791 45.455 5.42 0.00 0.00 5.69
47 48 5.588958 AAAGCTTCTAGGAATCAATTGGC 57.411 39.130 5.42 0.00 0.00 4.52
48 49 7.228308 CCTCTAAAGCTTCTAGGAATCAATTGG 59.772 40.741 13.79 0.00 0.00 3.16
49 50 7.228308 CCCTCTAAAGCTTCTAGGAATCAATTG 59.772 40.741 18.56 0.00 0.00 2.32
50 51 7.092219 ACCCTCTAAAGCTTCTAGGAATCAATT 60.092 37.037 18.56 0.00 0.00 2.32
51 52 6.388394 ACCCTCTAAAGCTTCTAGGAATCAAT 59.612 38.462 18.56 0.00 0.00 2.57
52 53 5.726793 ACCCTCTAAAGCTTCTAGGAATCAA 59.273 40.000 18.56 0.36 0.00 2.57
53 54 5.129485 CACCCTCTAAAGCTTCTAGGAATCA 59.871 44.000 18.56 0.89 0.00 2.57
54 55 5.129650 ACACCCTCTAAAGCTTCTAGGAATC 59.870 44.000 18.56 0.00 0.00 2.52
55 56 5.033522 ACACCCTCTAAAGCTTCTAGGAAT 58.966 41.667 18.56 7.54 0.00 3.01
56 57 4.426704 ACACCCTCTAAAGCTTCTAGGAA 58.573 43.478 18.56 1.95 0.00 3.36
57 58 4.024670 GACACCCTCTAAAGCTTCTAGGA 58.975 47.826 18.56 6.79 0.00 2.94
58 59 3.133183 GGACACCCTCTAAAGCTTCTAGG 59.867 52.174 0.00 7.07 0.00 3.02
59 60 3.769844 TGGACACCCTCTAAAGCTTCTAG 59.230 47.826 0.00 4.47 0.00 2.43
60 61 3.786553 TGGACACCCTCTAAAGCTTCTA 58.213 45.455 0.00 0.00 0.00 2.10
61 62 2.621070 TGGACACCCTCTAAAGCTTCT 58.379 47.619 0.00 0.00 0.00 2.85
62 63 3.055094 TGATGGACACCCTCTAAAGCTTC 60.055 47.826 0.00 0.00 0.00 3.86
63 64 2.912956 TGATGGACACCCTCTAAAGCTT 59.087 45.455 0.00 0.00 0.00 3.74
64 65 2.551270 TGATGGACACCCTCTAAAGCT 58.449 47.619 0.00 0.00 0.00 3.74
65 66 3.567478 ATGATGGACACCCTCTAAAGC 57.433 47.619 0.00 0.00 0.00 3.51
66 67 5.500234 TGAAATGATGGACACCCTCTAAAG 58.500 41.667 0.00 0.00 0.00 1.85
67 68 5.512942 TGAAATGATGGACACCCTCTAAA 57.487 39.130 0.00 0.00 0.00 1.85
68 69 5.512942 TTGAAATGATGGACACCCTCTAA 57.487 39.130 0.00 0.00 0.00 2.10
69 70 5.715439 ATTGAAATGATGGACACCCTCTA 57.285 39.130 0.00 0.00 0.00 2.43
70 71 4.598036 ATTGAAATGATGGACACCCTCT 57.402 40.909 0.00 0.00 0.00 3.69
71 72 5.665916 AAATTGAAATGATGGACACCCTC 57.334 39.130 0.00 0.00 0.00 4.30
72 73 7.416664 CGATAAAATTGAAATGATGGACACCCT 60.417 37.037 0.00 0.00 0.00 4.34
73 74 6.697019 CGATAAAATTGAAATGATGGACACCC 59.303 38.462 0.00 0.00 0.00 4.61
74 75 6.198966 GCGATAAAATTGAAATGATGGACACC 59.801 38.462 0.00 0.00 0.00 4.16
75 76 6.751425 TGCGATAAAATTGAAATGATGGACAC 59.249 34.615 0.00 0.00 0.00 3.67
76 77 6.861144 TGCGATAAAATTGAAATGATGGACA 58.139 32.000 0.00 0.00 0.00 4.02
77 78 7.489113 AGTTGCGATAAAATTGAAATGATGGAC 59.511 33.333 0.00 0.00 0.00 4.02
78 79 7.546358 AGTTGCGATAAAATTGAAATGATGGA 58.454 30.769 0.00 0.00 0.00 3.41
79 80 7.760131 AGTTGCGATAAAATTGAAATGATGG 57.240 32.000 0.00 0.00 0.00 3.51
87 88 9.906660 ACAGAAAATAAGTTGCGATAAAATTGA 57.093 25.926 0.00 0.00 0.00 2.57
89 90 9.906660 TGACAGAAAATAAGTTGCGATAAAATT 57.093 25.926 0.00 0.00 0.00 1.82
90 91 9.341899 GTGACAGAAAATAAGTTGCGATAAAAT 57.658 29.630 0.00 0.00 0.00 1.82
91 92 8.564574 AGTGACAGAAAATAAGTTGCGATAAAA 58.435 29.630 0.00 0.00 0.00 1.52
92 93 8.094798 AGTGACAGAAAATAAGTTGCGATAAA 57.905 30.769 0.00 0.00 0.00 1.40
93 94 7.667043 AGTGACAGAAAATAAGTTGCGATAA 57.333 32.000 0.00 0.00 0.00 1.75
94 95 8.766000 TTAGTGACAGAAAATAAGTTGCGATA 57.234 30.769 0.00 0.00 0.00 2.92
95 96 7.667043 TTAGTGACAGAAAATAAGTTGCGAT 57.333 32.000 0.00 0.00 0.00 4.58
96 97 7.485418 TTTAGTGACAGAAAATAAGTTGCGA 57.515 32.000 0.00 0.00 0.00 5.10
97 98 8.728088 ATTTTAGTGACAGAAAATAAGTTGCG 57.272 30.769 6.47 0.00 34.32 4.85
107 108 9.500785 TCACATGATGTATTTTAGTGACAGAAA 57.499 29.630 0.00 0.00 30.43 2.52
108 109 9.671279 ATCACATGATGTATTTTAGTGACAGAA 57.329 29.630 0.00 0.00 37.35 3.02
109 110 9.101655 CATCACATGATGTATTTTAGTGACAGA 57.898 33.333 12.83 0.00 45.10 3.41
125 126 1.290203 GAACCGCGACATCACATGAT 58.710 50.000 8.23 0.00 34.56 2.45
126 127 0.037790 TGAACCGCGACATCACATGA 60.038 50.000 8.23 0.00 0.00 3.07
127 128 1.004610 GATGAACCGCGACATCACATG 60.005 52.381 24.36 0.00 41.44 3.21
128 129 1.290203 GATGAACCGCGACATCACAT 58.710 50.000 24.36 14.56 41.44 3.21
129 130 0.739462 GGATGAACCGCGACATCACA 60.739 55.000 27.54 13.69 42.95 3.58
130 131 0.739462 TGGATGAACCGCGACATCAC 60.739 55.000 27.54 20.91 42.95 3.06
131 132 0.036858 TTGGATGAACCGCGACATCA 60.037 50.000 27.54 20.37 42.95 3.07
132 133 1.299541 ATTGGATGAACCGCGACATC 58.700 50.000 22.60 22.60 42.61 3.06
133 134 2.613026 TATTGGATGAACCGCGACAT 57.387 45.000 8.23 10.52 42.61 3.06
134 135 2.209273 CATATTGGATGAACCGCGACA 58.791 47.619 8.23 5.25 42.61 4.35
135 136 2.210116 ACATATTGGATGAACCGCGAC 58.790 47.619 8.23 0.00 42.61 5.19
136 137 2.611751 CAACATATTGGATGAACCGCGA 59.388 45.455 8.23 0.00 42.61 5.87
137 138 2.611751 TCAACATATTGGATGAACCGCG 59.388 45.455 0.00 0.00 42.61 6.46
138 139 4.611355 CGATCAACATATTGGATGAACCGC 60.611 45.833 0.00 0.00 42.61 5.68
139 140 4.611355 GCGATCAACATATTGGATGAACCG 60.611 45.833 0.00 0.00 42.61 4.44
140 141 4.320494 GGCGATCAACATATTGGATGAACC 60.320 45.833 0.00 0.00 36.39 3.62
141 142 4.320494 GGGCGATCAACATATTGGATGAAC 60.320 45.833 0.00 0.00 36.39 3.18
142 143 3.820467 GGGCGATCAACATATTGGATGAA 59.180 43.478 0.00 0.00 36.39 2.57
143 144 3.181446 TGGGCGATCAACATATTGGATGA 60.181 43.478 0.00 0.00 36.39 2.92
144 145 3.148412 TGGGCGATCAACATATTGGATG 58.852 45.455 0.00 0.00 36.39 3.51
145 146 3.507162 TGGGCGATCAACATATTGGAT 57.493 42.857 0.00 0.00 36.39 3.41
146 147 3.072915 AGATGGGCGATCAACATATTGGA 59.927 43.478 12.18 0.00 36.39 3.53
147 148 3.189910 CAGATGGGCGATCAACATATTGG 59.810 47.826 12.18 0.00 36.39 3.16
148 149 3.365666 GCAGATGGGCGATCAACATATTG 60.366 47.826 12.18 0.78 37.14 1.90
149 150 2.816087 GCAGATGGGCGATCAACATATT 59.184 45.455 12.18 0.00 32.86 1.28
150 151 2.430465 GCAGATGGGCGATCAACATAT 58.570 47.619 12.18 0.00 32.86 1.78
151 152 1.543208 GGCAGATGGGCGATCAACATA 60.543 52.381 12.18 0.00 32.86 2.29
152 153 0.820891 GGCAGATGGGCGATCAACAT 60.821 55.000 12.18 0.00 32.86 2.71
153 154 1.451927 GGCAGATGGGCGATCAACA 60.452 57.895 12.18 0.00 32.86 3.33
154 155 3.425422 GGCAGATGGGCGATCAAC 58.575 61.111 12.18 3.02 32.86 3.18
161 162 0.244721 GTGTTGAAAGGCAGATGGGC 59.755 55.000 0.00 0.00 43.80 5.36
162 163 0.523072 CGTGTTGAAAGGCAGATGGG 59.477 55.000 0.00 0.00 0.00 4.00
163 164 1.069022 CACGTGTTGAAAGGCAGATGG 60.069 52.381 7.58 0.00 0.00 3.51
164 165 1.664016 GCACGTGTTGAAAGGCAGATG 60.664 52.381 18.38 0.00 0.00 2.90
165 166 0.593128 GCACGTGTTGAAAGGCAGAT 59.407 50.000 18.38 0.00 0.00 2.90
166 167 1.444119 GGCACGTGTTGAAAGGCAGA 61.444 55.000 18.38 0.00 0.00 4.26
167 168 1.008538 GGCACGTGTTGAAAGGCAG 60.009 57.895 18.38 0.00 0.00 4.85
168 169 2.485795 GGGCACGTGTTGAAAGGCA 61.486 57.895 18.38 0.00 0.00 4.75
169 170 2.335011 GGGCACGTGTTGAAAGGC 59.665 61.111 18.38 0.58 0.00 4.35
170 171 2.561037 GGGGGCACGTGTTGAAAGG 61.561 63.158 18.38 0.00 0.00 3.11
171 172 3.039134 GGGGGCACGTGTTGAAAG 58.961 61.111 18.38 0.00 0.00 2.62
191 192 0.179004 TCGCACAACACCCCTCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
207 208 2.325857 GCGTCTCATTGCCATCGC 59.674 61.111 0.00 0.00 37.17 4.58
233 234 1.199558 CAAGCAAGGCAAGAGAGCTTC 59.800 52.381 0.00 0.00 43.06 3.86
255 256 8.024285 AGAACTACAACTTTCATCTTCGAGTAG 58.976 37.037 0.00 0.00 34.26 2.57
256 257 7.883217 AGAACTACAACTTTCATCTTCGAGTA 58.117 34.615 0.00 0.00 0.00 2.59
258 259 6.309251 GGAGAACTACAACTTTCATCTTCGAG 59.691 42.308 0.00 0.00 0.00 4.04
264 265 7.389053 ACATGAAGGAGAACTACAACTTTCATC 59.611 37.037 0.00 0.00 0.00 2.92
284 285 1.603236 GCCCGCCCAATCAACATGAA 61.603 55.000 0.00 0.00 0.00 2.57
301 302 2.605094 TGCTATCGCAAATCTCGCC 58.395 52.632 0.00 0.00 44.62 5.54
321 322 2.540101 ACAAAGATAGAACGCGCATAGC 59.460 45.455 5.73 0.00 43.95 2.97
327 328 5.744345 ACAAGATCTACAAAGATAGAACGCG 59.256 40.000 3.53 3.53 42.73 6.01
328 329 6.531948 ACACAAGATCTACAAAGATAGAACGC 59.468 38.462 0.00 0.00 42.73 4.84
330 331 9.209175 ACAACACAAGATCTACAAAGATAGAAC 57.791 33.333 0.00 0.00 42.73 3.01
338 339 7.310072 TCGAAAACAACACAAGATCTACAAA 57.690 32.000 0.00 0.00 0.00 2.83
358 359 6.378710 AGAAAGAGATCGTATCACATCGAA 57.621 37.500 0.00 0.00 39.45 3.71
360 361 5.974158 ACAAGAAAGAGATCGTATCACATCG 59.026 40.000 0.00 0.00 0.00 3.84
370 371 2.766828 AGGGGGTACAAGAAAGAGATCG 59.233 50.000 0.00 0.00 0.00 3.69
379 388 3.562609 GGCAAATACAAGGGGGTACAAGA 60.563 47.826 0.00 0.00 0.00 3.02
387 396 2.423064 GCCGGGCAAATACAAGGGG 61.423 63.158 15.62 0.00 0.00 4.79
407 416 4.829872 TTATTAAGAGAGAACCCGGCAA 57.170 40.909 0.00 0.00 0.00 4.52
522 546 4.023707 CACGACTTTGAATTTGCTCTCCTT 60.024 41.667 0.00 0.00 0.00 3.36
655 680 1.201877 CGCCACGAGGTAAATTGTTCG 60.202 52.381 0.00 0.00 38.88 3.95
699 725 3.314357 GGCTGGACCGGATTGTAAATAAC 59.686 47.826 9.46 0.00 0.00 1.89
847 1049 4.787280 AGAGGCGTGGAGGGGGAG 62.787 72.222 0.00 0.00 0.00 4.30
848 1050 4.779733 GAGAGGCGTGGAGGGGGA 62.780 72.222 0.00 0.00 0.00 4.81
882 1084 2.936032 GGGCAGAAGGAGGTGGGT 60.936 66.667 0.00 0.00 0.00 4.51
996 1206 4.570663 GTCGAGGTCGCCATCCCG 62.571 72.222 0.00 0.00 39.60 5.14
1150 1360 6.084326 ACAAGCAATTAGAACGGAACAAAT 57.916 33.333 0.00 0.00 0.00 2.32
1198 1408 3.721706 CCCACCCCAGTGCTCTCC 61.722 72.222 0.00 0.00 43.09 3.71
1219 1429 5.810587 TCCGATACACTGAAGCTACAATTTC 59.189 40.000 0.00 0.00 0.00 2.17
1240 1450 7.620880 TCCAAATACTCCCATATATTTCTCCG 58.379 38.462 0.00 0.00 30.31 4.63
1327 1539 8.655970 CGATGTGTACAATATCAACTGAAAGAA 58.344 33.333 16.96 0.00 37.43 2.52
1341 1553 2.569853 TCCACCTTCCGATGTGTACAAT 59.430 45.455 0.00 0.00 0.00 2.71
1353 1565 2.370849 TCAACACTACCTTCCACCTTCC 59.629 50.000 0.00 0.00 0.00 3.46
1354 1566 3.764237 TCAACACTACCTTCCACCTTC 57.236 47.619 0.00 0.00 0.00 3.46
1355 1567 3.458487 AGTTCAACACTACCTTCCACCTT 59.542 43.478 0.00 0.00 31.97 3.50
1356 1568 3.046374 AGTTCAACACTACCTTCCACCT 58.954 45.455 0.00 0.00 31.97 4.00
1357 1569 3.139077 CAGTTCAACACTACCTTCCACC 58.861 50.000 0.00 0.00 32.76 4.61
1358 1570 3.560068 CACAGTTCAACACTACCTTCCAC 59.440 47.826 0.00 0.00 32.76 4.02
1359 1571 3.804036 CACAGTTCAACACTACCTTCCA 58.196 45.455 0.00 0.00 32.76 3.53
1360 1572 2.548480 GCACAGTTCAACACTACCTTCC 59.452 50.000 0.00 0.00 32.76 3.46
1477 1689 3.869246 ACTAACAATACCAAGAATCGCGG 59.131 43.478 6.13 0.00 0.00 6.46
1478 1690 5.062934 TGAACTAACAATACCAAGAATCGCG 59.937 40.000 0.00 0.00 0.00 5.87
1524 1736 4.489810 CCTTGATGATCCTATAGACACGC 58.510 47.826 0.00 0.00 0.00 5.34
1525 1737 4.524714 ACCCTTGATGATCCTATAGACACG 59.475 45.833 0.00 0.00 0.00 4.49
1625 1837 4.215908 AGGTTCCTCTGTTTTCCTTTTCC 58.784 43.478 0.00 0.00 0.00 3.13
1748 1960 3.491619 CCTCTGTCCCATAATGTGAGACG 60.492 52.174 0.00 0.00 0.00 4.18
1753 1965 2.774234 ACTCCCTCTGTCCCATAATGTG 59.226 50.000 0.00 0.00 0.00 3.21
1797 2009 8.682936 AAATACTCTGGTATGAAGCCTTAATG 57.317 34.615 0.00 0.00 38.50 1.90
1949 2164 5.871524 ACAGTATGAAATAGAGTGTGCACTG 59.128 40.000 19.41 4.24 39.59 3.66
1950 2165 6.042638 ACAGTATGAAATAGAGTGTGCACT 57.957 37.500 19.41 4.31 41.71 4.40
1951 2166 8.425577 AATACAGTATGAAATAGAGTGTGCAC 57.574 34.615 10.75 10.75 39.69 4.57
1952 2167 8.257306 TGAATACAGTATGAAATAGAGTGTGCA 58.743 33.333 0.00 0.00 39.69 4.57
1953 2168 8.648557 TGAATACAGTATGAAATAGAGTGTGC 57.351 34.615 0.00 0.00 39.69 4.57
1955 2170 9.684448 CGATGAATACAGTATGAAATAGAGTGT 57.316 33.333 0.00 0.00 39.69 3.55
2316 2533 6.839820 AGAAAAATGCAAAGAAAAGAGCAG 57.160 33.333 0.00 0.00 40.71 4.24
2317 2534 7.614124 AAAGAAAAATGCAAAGAAAAGAGCA 57.386 28.000 0.00 0.00 41.73 4.26
2792 3010 4.881850 GGAATGGGCAATAATACTATCCCG 59.118 45.833 0.00 0.00 36.56 5.14
2805 3054 2.617453 TAAGGCGGGGAATGGGCAA 61.617 57.895 0.00 0.00 0.00 4.52
2814 3066 3.076278 TACACGGGTAAGGCGGGG 61.076 66.667 0.00 0.00 0.00 5.73
2855 3107 4.038883 CGGGAATTACCTTGGGTCTACTAG 59.961 50.000 4.85 0.00 37.09 2.57
2923 3177 4.645136 GGTTAGGGATTTCTTAGGGCTTTG 59.355 45.833 0.00 0.00 0.00 2.77
2990 3247 6.422776 ACAACCTTCGCTAGTATTTCAATG 57.577 37.500 0.00 0.00 0.00 2.82
3075 3332 2.229792 GCATGCGGGGATGAAAATCTA 58.770 47.619 0.00 0.00 0.00 1.98
3264 3522 8.776376 AGAACAAAACAAAATTCTGAACATGT 57.224 26.923 0.00 0.00 30.26 3.21
3946 4222 1.758280 ACGACAGGTTTGGTGTACTCA 59.242 47.619 0.00 0.00 0.00 3.41
3997 4273 4.202388 GGTACCTCTTGTCCCTTTGTTACA 60.202 45.833 4.06 0.00 0.00 2.41
4431 4712 2.630158 CTGAAAGATGCTGCAGTAGCT 58.370 47.619 17.31 17.31 45.79 3.32
5010 5295 6.909550 AATGAATAGTTTGGCACCACTTTA 57.090 33.333 3.94 0.00 0.00 1.85
5183 5468 4.409901 TGTGATGCATATCCTTTCCTCTCA 59.590 41.667 0.00 0.00 32.09 3.27
5774 6061 7.378966 TGTAGTCACTTGTTGAAATCTCTAGG 58.621 38.462 0.00 0.00 35.39 3.02
5775 6062 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
5780 6067 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
5788 6075 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
5793 6080 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
5837 6124 9.339850 GACTACCACATACGGATGTATATAGAT 57.660 37.037 22.62 12.37 44.82 1.98
5858 6145 7.660208 TCTTTGTAGAGGTTTCAAATGGACTAC 59.340 37.037 0.00 0.00 32.04 2.73
5860 6147 6.486993 GTCTTTGTAGAGGTTTCAAATGGACT 59.513 38.462 0.00 0.00 30.68 3.85
5879 6166 7.415206 CCCTCCGTTCCTAAATATTTGTCTTTG 60.415 40.741 11.05 0.00 0.00 2.77
6140 6427 6.814506 TCACCTAGACAACTCTAGTTACAC 57.185 41.667 0.00 0.00 43.34 2.90
6236 6523 4.384247 GCTAGCGACTATAACATCAGCTTG 59.616 45.833 0.00 0.00 35.02 4.01
6529 6817 9.212641 GATCATGTGTGACTTGTGCTAATATAT 57.787 33.333 0.00 0.00 37.14 0.86
6569 6857 6.532657 AGCACTTTATATGCACTTTGAATTGC 59.467 34.615 0.00 0.00 45.92 3.56
6597 6892 6.984474 TCGCCACATATTAAGAGAAACTAAGG 59.016 38.462 0.00 0.00 0.00 2.69
6598 6893 7.491372 TGTCGCCACATATTAAGAGAAACTAAG 59.509 37.037 0.00 0.00 0.00 2.18
6663 6965 6.712998 TCCTGGAATAATTCGAGACAAAAACA 59.287 34.615 0.00 0.00 37.67 2.83
6674 6976 5.700832 TCGAATGGAATCCTGGAATAATTCG 59.299 40.000 25.29 25.29 43.83 3.34
6682 6984 1.134521 CGGTTCGAATGGAATCCTGGA 60.135 52.381 0.00 0.00 36.92 3.86
6844 7146 1.065551 GTGGCAATGGCTAATCCGAAC 59.934 52.381 8.59 0.00 40.87 3.95
6848 7150 1.035139 CCAGTGGCAATGGCTAATCC 58.965 55.000 22.13 0.00 40.87 3.01
6858 7160 2.735883 GCAATGCACCAGTGGCAA 59.264 55.556 9.78 0.00 45.60 4.52
6871 7173 1.094785 CTTCCATTCCGAACGGCAAT 58.905 50.000 8.48 6.72 34.68 3.56
6917 7219 1.164411 TTGCCTGCATAGTTTGTCGG 58.836 50.000 0.00 0.00 0.00 4.79
6989 7291 1.129058 ACAGAACGGGACAGGAAACT 58.871 50.000 0.00 0.00 46.44 2.66
6998 7300 3.501828 CACATCATCAAAACAGAACGGGA 59.498 43.478 0.00 0.00 0.00 5.14
7036 7338 1.604278 GGGAGCTGATTTTACGGATGC 59.396 52.381 0.00 0.00 0.00 3.91
7040 7342 0.546598 AGGGGGAGCTGATTTTACGG 59.453 55.000 0.00 0.00 0.00 4.02
7129 7432 3.189285 CACTTTTTGTTTGGTGCCTCTG 58.811 45.455 0.00 0.00 0.00 3.35
7130 7433 2.418609 GCACTTTTTGTTTGGTGCCTCT 60.419 45.455 5.73 0.00 46.17 3.69
7148 7451 3.686726 CCAGTGGAAAGAGTAATCAGCAC 59.313 47.826 1.68 0.00 0.00 4.40
7154 7457 4.469657 TGTTTGCCAGTGGAAAGAGTAAT 58.530 39.130 15.20 0.00 0.00 1.89
7164 7467 1.145162 GCAACGTTGTTTGCCAGTGG 61.145 55.000 27.78 4.20 45.22 4.00
7228 7532 5.173131 GCTTAATTGCAAATTTATCGACGGG 59.827 40.000 1.71 0.00 0.00 5.28
7285 7589 2.929398 CAACAAAACCTTTCACCAGCAC 59.071 45.455 0.00 0.00 0.00 4.40
7304 7838 7.717568 TGGAAACGAAATGTCTTTTATTCCAA 58.282 30.769 15.75 6.84 39.36 3.53
7307 7841 7.409343 CGCTTGGAAACGAAATGTCTTTTATTC 60.409 37.037 0.00 0.00 0.00 1.75
7316 7850 2.356382 TCAACGCTTGGAAACGAAATGT 59.644 40.909 0.00 0.00 0.00 2.71
7323 7857 1.673920 TGGACTTCAACGCTTGGAAAC 59.326 47.619 0.00 0.00 0.00 2.78
7332 7866 4.058124 TGAAATGTCTCTGGACTTCAACG 58.942 43.478 0.00 0.00 42.54 4.10
7333 7867 6.566197 AATGAAATGTCTCTGGACTTCAAC 57.434 37.500 0.00 0.00 42.54 3.18
7341 7880 6.916440 TCACAATGAAATGAAATGTCTCTGG 58.084 36.000 0.00 0.00 29.60 3.86
7359 7898 7.503230 TCATGTGCAATGGTATCTTATCACAAT 59.497 33.333 0.00 0.00 36.88 2.71
7361 7900 6.355747 TCATGTGCAATGGTATCTTATCACA 58.644 36.000 0.00 0.00 37.56 3.58
7403 7960 1.134068 CCTAAAAGGGGTAGCAGAGGC 60.134 57.143 0.00 0.00 41.61 4.70
7409 7966 2.172717 TCATCAGCCTAAAAGGGGTAGC 59.827 50.000 0.00 0.00 35.37 3.58
7410 7967 4.646572 GATCATCAGCCTAAAAGGGGTAG 58.353 47.826 0.00 0.00 35.37 3.18
7412 7969 2.158755 CGATCATCAGCCTAAAAGGGGT 60.159 50.000 0.00 0.00 35.37 4.95
7413 7970 2.158755 ACGATCATCAGCCTAAAAGGGG 60.159 50.000 0.00 0.00 35.37 4.79
7414 7971 2.874701 CACGATCATCAGCCTAAAAGGG 59.125 50.000 0.00 0.00 35.37 3.95
7415 7972 3.535561 ACACGATCATCAGCCTAAAAGG 58.464 45.455 0.00 0.00 38.80 3.11
7416 7973 4.631377 TGAACACGATCATCAGCCTAAAAG 59.369 41.667 0.00 0.00 0.00 2.27
7417 7974 4.574892 TGAACACGATCATCAGCCTAAAA 58.425 39.130 0.00 0.00 0.00 1.52
7419 7976 3.885724 TGAACACGATCATCAGCCTAA 57.114 42.857 0.00 0.00 0.00 2.69
7420 7977 3.885724 TTGAACACGATCATCAGCCTA 57.114 42.857 0.00 0.00 0.00 3.93
7421 7978 2.768253 TTGAACACGATCATCAGCCT 57.232 45.000 0.00 0.00 0.00 4.58
7424 7981 4.813161 AGCCTATTTGAACACGATCATCAG 59.187 41.667 0.00 0.00 0.00 2.90
7425 7982 4.571984 CAGCCTATTTGAACACGATCATCA 59.428 41.667 0.00 0.00 0.00 3.07
7426 7983 4.572389 ACAGCCTATTTGAACACGATCATC 59.428 41.667 0.00 0.00 0.00 2.92
7427 7984 4.517285 ACAGCCTATTTGAACACGATCAT 58.483 39.130 0.00 0.00 0.00 2.45
7428 7985 3.932710 GACAGCCTATTTGAACACGATCA 59.067 43.478 0.00 0.00 0.00 2.92
7429 7986 3.000322 CGACAGCCTATTTGAACACGATC 60.000 47.826 0.00 0.00 0.00 3.69
7430 7987 2.930040 CGACAGCCTATTTGAACACGAT 59.070 45.455 0.00 0.00 0.00 3.73
7431 7988 2.333926 CGACAGCCTATTTGAACACGA 58.666 47.619 0.00 0.00 0.00 4.35
7432 7989 1.201921 GCGACAGCCTATTTGAACACG 60.202 52.381 0.00 0.00 37.42 4.49
7459 8016 5.146010 AGAGAGAAAACAGACAGGTGATC 57.854 43.478 0.00 0.00 0.00 2.92
7475 8032 1.152652 GAGGGGCGATGGAGAGAGA 60.153 63.158 0.00 0.00 0.00 3.10
7476 8033 1.152567 AGAGGGGCGATGGAGAGAG 60.153 63.158 0.00 0.00 0.00 3.20
7533 8104 3.997021 GACACAGCAATAATATCCGAGGG 59.003 47.826 0.00 0.00 0.00 4.30
7534 8105 3.997021 GGACACAGCAATAATATCCGAGG 59.003 47.826 0.00 0.00 0.00 4.63
7535 8106 4.631131 TGGACACAGCAATAATATCCGAG 58.369 43.478 0.00 0.00 0.00 4.63
7536 8107 4.681074 TGGACACAGCAATAATATCCGA 57.319 40.909 0.00 0.00 0.00 4.55
7537 8108 4.393062 GGATGGACACAGCAATAATATCCG 59.607 45.833 0.00 0.00 33.84 4.18
7538 8109 4.702131 GGGATGGACACAGCAATAATATCC 59.298 45.833 0.00 0.00 33.84 2.59
7570 8141 2.736057 TGGCACCTGGCAGAAAGATCT 61.736 52.381 17.94 0.00 46.12 2.75
7571 8142 0.322816 TGGCACCTGGCAGAAAGATC 60.323 55.000 17.94 0.99 46.12 2.75
7572 8143 1.769665 TGGCACCTGGCAGAAAGAT 59.230 52.632 17.94 0.00 46.12 2.40
7580 8151 1.178534 TTACAAAGCTGGCACCTGGC 61.179 55.000 0.00 0.00 43.74 4.85
7581 8152 1.000274 GTTTACAAAGCTGGCACCTGG 60.000 52.381 0.00 0.00 0.00 4.45
7582 8153 1.956477 AGTTTACAAAGCTGGCACCTG 59.044 47.619 0.00 0.00 0.00 4.00
7583 8154 2.364972 AGTTTACAAAGCTGGCACCT 57.635 45.000 0.00 0.00 0.00 4.00
7584 8155 2.095212 GCTAGTTTACAAAGCTGGCACC 60.095 50.000 6.91 0.00 36.84 5.01
7585 8156 2.412847 CGCTAGTTTACAAAGCTGGCAC 60.413 50.000 11.22 0.00 36.69 5.01
7595 8166 6.040209 TGGATAGTTTTCCGCTAGTTTACA 57.960 37.500 0.00 0.00 38.74 2.41
7604 8175 6.541278 ACCTATTACTTTGGATAGTTTTCCGC 59.459 38.462 0.00 0.00 38.74 5.54
7606 8177 8.674607 CACACCTATTACTTTGGATAGTTTTCC 58.325 37.037 0.00 0.00 36.24 3.13
7608 8179 9.010029 CACACACCTATTACTTTGGATAGTTTT 57.990 33.333 0.00 0.00 0.00 2.43
7611 8182 6.113411 GCACACACCTATTACTTTGGATAGT 58.887 40.000 0.00 0.00 0.00 2.12
7633 8204 0.953727 GCAACTGGTGAGTGAATGCA 59.046 50.000 0.00 0.00 34.74 3.96
7634 8205 1.068748 CAGCAACTGGTGAGTGAATGC 60.069 52.381 2.72 0.00 45.66 3.56
7635 8206 1.068748 GCAGCAACTGGTGAGTGAATG 60.069 52.381 12.89 0.00 45.66 2.67
7636 8207 1.242076 GCAGCAACTGGTGAGTGAAT 58.758 50.000 12.89 0.00 45.66 2.57
7651 8222 1.266786 GCATTTCGATGCGATGCAGC 61.267 55.000 14.69 0.00 43.65 5.25
7652 8223 2.779636 GCATTTCGATGCGATGCAG 58.220 52.632 14.69 0.00 43.65 4.41
7661 8232 1.796151 CACCGCAGTGCATTTCGAT 59.204 52.632 16.83 0.00 37.14 3.59
7662 8233 3.252964 CACCGCAGTGCATTTCGA 58.747 55.556 16.83 0.00 37.14 3.71
7671 8242 0.249073 GCGAGATATCACACCGCAGT 60.249 55.000 19.49 0.00 44.55 4.40
7672 8243 0.941463 GGCGAGATATCACACCGCAG 60.941 60.000 23.10 1.73 46.64 5.18
7673 8244 1.067416 GGCGAGATATCACACCGCA 59.933 57.895 23.10 0.00 46.64 5.69
7674 8245 0.941463 CTGGCGAGATATCACACCGC 60.941 60.000 17.49 17.49 44.45 5.68
7675 8246 0.385751 ACTGGCGAGATATCACACCG 59.614 55.000 1.44 4.23 0.00 4.94
7676 8247 1.600663 CGACTGGCGAGATATCACACC 60.601 57.143 1.44 2.74 44.57 4.16
7677 8248 1.759994 CGACTGGCGAGATATCACAC 58.240 55.000 1.44 0.00 44.57 3.82
7678 8249 0.030773 GCGACTGGCGAGATATCACA 59.969 55.000 7.31 0.00 44.57 3.58
7679 8250 2.802683 GCGACTGGCGAGATATCAC 58.197 57.895 7.31 0.00 44.57 3.06
7690 8261 3.691744 GAGGAGACGCAGCGACTGG 62.692 68.421 24.42 0.00 31.69 4.00
7691 8262 2.202544 GAGGAGACGCAGCGACTG 60.203 66.667 24.42 0.00 31.69 3.51
7692 8263 3.805307 CGAGGAGACGCAGCGACT 61.805 66.667 24.65 22.06 34.39 4.18
7693 8264 4.104417 ACGAGGAGACGCAGCGAC 62.104 66.667 24.65 16.68 36.70 5.19
7694 8265 4.103103 CACGAGGAGACGCAGCGA 62.103 66.667 24.65 0.00 36.70 4.93
7696 8267 3.749064 TCCACGAGGAGACGCAGC 61.749 66.667 0.00 0.00 39.61 5.25
7697 8268 2.179517 GTCCACGAGGAGACGCAG 59.820 66.667 0.21 0.00 46.92 5.18
7701 8272 2.126424 GTGCGTCCACGAGGAGAC 60.126 66.667 0.21 0.00 46.92 3.36
7702 8273 3.371063 GGTGCGTCCACGAGGAGA 61.371 66.667 0.21 0.00 46.92 3.71
7703 8274 4.778415 CGGTGCGTCCACGAGGAG 62.778 72.222 0.21 0.00 46.92 3.69
7716 8287 3.032609 GATCAGATCGGCGCGGTG 61.033 66.667 15.06 6.30 0.00 4.94
7717 8288 3.219928 AGATCAGATCGGCGCGGT 61.220 61.111 15.06 0.00 0.00 5.68
7718 8289 2.483741 ATCAGATCAGATCGGCGCGG 62.484 60.000 8.83 8.94 0.00 6.46
7719 8290 1.069924 GATCAGATCAGATCGGCGCG 61.070 60.000 11.81 0.00 35.52 6.86
7720 8291 2.735634 GATCAGATCAGATCGGCGC 58.264 57.895 11.81 0.00 35.52 6.53
7725 8296 5.236911 GCAAAGGAACAGATCAGATCAGATC 59.763 44.000 17.88 17.88 43.73 2.75
7726 8297 5.124645 GCAAAGGAACAGATCAGATCAGAT 58.875 41.667 13.14 0.00 0.00 2.90
7727 8298 4.019950 TGCAAAGGAACAGATCAGATCAGA 60.020 41.667 13.14 0.00 0.00 3.27
7728 8299 4.259356 TGCAAAGGAACAGATCAGATCAG 58.741 43.478 13.14 7.22 0.00 2.90
7729 8300 4.019950 TCTGCAAAGGAACAGATCAGATCA 60.020 41.667 13.14 0.00 37.99 2.92
7730 8301 4.511527 TCTGCAAAGGAACAGATCAGATC 58.488 43.478 1.64 1.64 37.99 2.75
7731 8302 4.564782 TCTGCAAAGGAACAGATCAGAT 57.435 40.909 0.00 0.00 37.99 2.90
7732 8303 4.356405 TTCTGCAAAGGAACAGATCAGA 57.644 40.909 0.00 0.00 42.26 3.27
7733 8304 5.044428 CTTTCTGCAAAGGAACAGATCAG 57.956 43.478 0.00 0.00 42.26 2.90
7744 8315 6.966435 TTCTTTTTGAACCTTTCTGCAAAG 57.034 33.333 0.00 0.00 39.11 2.77
7745 8316 6.371271 CCTTTCTTTTTGAACCTTTCTGCAAA 59.629 34.615 0.00 0.00 33.88 3.68
7746 8317 5.874261 CCTTTCTTTTTGAACCTTTCTGCAA 59.126 36.000 0.00 0.00 33.88 4.08
7747 8318 5.046663 ACCTTTCTTTTTGAACCTTTCTGCA 60.047 36.000 0.00 0.00 33.88 4.41
7748 8319 5.291858 CACCTTTCTTTTTGAACCTTTCTGC 59.708 40.000 0.00 0.00 33.88 4.26
7749 8320 5.291858 GCACCTTTCTTTTTGAACCTTTCTG 59.708 40.000 0.00 0.00 33.88 3.02
7750 8321 5.046663 TGCACCTTTCTTTTTGAACCTTTCT 60.047 36.000 0.00 0.00 33.88 2.52
7751 8322 5.175127 TGCACCTTTCTTTTTGAACCTTTC 58.825 37.500 0.00 0.00 33.88 2.62
7752 8323 5.159273 TGCACCTTTCTTTTTGAACCTTT 57.841 34.783 0.00 0.00 33.88 3.11
7753 8324 4.817318 TGCACCTTTCTTTTTGAACCTT 57.183 36.364 0.00 0.00 33.88 3.50
7754 8325 4.696455 CATGCACCTTTCTTTTTGAACCT 58.304 39.130 0.00 0.00 33.88 3.50
7755 8326 3.248363 GCATGCACCTTTCTTTTTGAACC 59.752 43.478 14.21 0.00 33.88 3.62
7756 8327 3.060339 CGCATGCACCTTTCTTTTTGAAC 60.060 43.478 19.57 0.00 33.88 3.18
7757 8328 3.122297 CGCATGCACCTTTCTTTTTGAA 58.878 40.909 19.57 0.00 0.00 2.69
7758 8329 2.360483 TCGCATGCACCTTTCTTTTTGA 59.640 40.909 19.57 0.00 0.00 2.69
7759 8330 2.741612 TCGCATGCACCTTTCTTTTTG 58.258 42.857 19.57 0.00 0.00 2.44
7760 8331 3.319755 CATCGCATGCACCTTTCTTTTT 58.680 40.909 19.57 0.00 0.00 1.94
7761 8332 2.950433 CATCGCATGCACCTTTCTTTT 58.050 42.857 19.57 0.00 0.00 2.27
7762 8333 2.642139 CATCGCATGCACCTTTCTTT 57.358 45.000 19.57 0.00 0.00 2.52
7787 8358 2.740055 CCACACCACTCGCTCTGC 60.740 66.667 0.00 0.00 0.00 4.26
7788 8359 2.740055 GCCACACCACTCGCTCTG 60.740 66.667 0.00 0.00 0.00 3.35
7789 8360 4.363990 CGCCACACCACTCGCTCT 62.364 66.667 0.00 0.00 0.00 4.09
7790 8361 4.664677 ACGCCACACCACTCGCTC 62.665 66.667 0.00 0.00 0.00 5.03
7791 8362 4.969196 CACGCCACACCACTCGCT 62.969 66.667 0.00 0.00 0.00 4.93
7792 8363 4.961511 TCACGCCACACCACTCGC 62.962 66.667 0.00 0.00 0.00 5.03
7793 8364 2.048222 ATCACGCCACACCACTCG 60.048 61.111 0.00 0.00 0.00 4.18
7794 8365 0.037697 TACATCACGCCACACCACTC 60.038 55.000 0.00 0.00 0.00 3.51
7795 8366 0.320421 GTACATCACGCCACACCACT 60.320 55.000 0.00 0.00 0.00 4.00
7796 8367 1.296056 GGTACATCACGCCACACCAC 61.296 60.000 0.00 0.00 0.00 4.16
7797 8368 1.004320 GGTACATCACGCCACACCA 60.004 57.895 0.00 0.00 0.00 4.17
7798 8369 2.098233 CGGTACATCACGCCACACC 61.098 63.158 0.00 0.00 0.00 4.16
7799 8370 1.373748 ACGGTACATCACGCCACAC 60.374 57.895 0.00 0.00 0.00 3.82
7800 8371 1.373622 CACGGTACATCACGCCACA 60.374 57.895 0.00 0.00 0.00 4.17
7801 8372 1.349259 GACACGGTACATCACGCCAC 61.349 60.000 0.00 0.00 0.00 5.01
7802 8373 1.080366 GACACGGTACATCACGCCA 60.080 57.895 0.00 0.00 0.00 5.69
7803 8374 1.808390 GGACACGGTACATCACGCC 60.808 63.158 0.00 0.00 0.00 5.68
7804 8375 3.776656 GGACACGGTACATCACGC 58.223 61.111 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.