Multiple sequence alignment - TraesCS2D01G166300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G166300 chr2D 100.000 3357 0 0 1 3357 110402132 110405488 0.000000e+00 6200.0
1 TraesCS2D01G166300 chr2D 91.853 1031 51 12 1090 2110 110630449 110629442 0.000000e+00 1408.0
2 TraesCS2D01G166300 chr2D 92.734 578 26 6 1610 2174 109913665 109914239 0.000000e+00 821.0
3 TraesCS2D01G166300 chr2D 92.979 470 24 5 1145 1613 109906396 109906857 0.000000e+00 676.0
4 TraesCS2D01G166300 chr2D 95.982 224 7 2 693 915 8132643 8132865 2.460000e-96 363.0
5 TraesCS2D01G166300 chr2D 85.185 108 8 5 946 1050 110630546 110630444 1.650000e-18 104.0
6 TraesCS2D01G166300 chr2D 79.452 146 20 6 32 168 535114196 535114340 9.920000e-16 95.3
7 TraesCS2D01G166300 chr2D 89.552 67 3 4 231 295 109905924 109905988 7.720000e-12 82.4
8 TraesCS2D01G166300 chr2B 89.703 2292 127 48 1090 3357 159602449 159600243 0.000000e+00 2824.0
9 TraesCS2D01G166300 chr2B 92.178 1892 85 33 985 2844 159573192 159575052 0.000000e+00 2615.0
10 TraesCS2D01G166300 chr2B 95.312 192 6 2 1984 2174 159326521 159326710 5.440000e-78 302.0
11 TraesCS2D01G166300 chr2B 96.855 159 4 1 3194 3352 159575067 159575224 7.140000e-67 265.0
12 TraesCS2D01G166300 chr2B 83.036 112 8 8 946 1050 159602551 159602444 1.280000e-14 91.6
13 TraesCS2D01G166300 chr2B 97.917 48 1 0 943 990 159564955 159565002 2.150000e-12 84.2
14 TraesCS2D01G166300 chr2B 89.286 56 4 2 231 285 159323096 159323150 6.010000e-08 69.4
15 TraesCS2D01G166300 chr2A 91.170 1325 61 27 1067 2383 106653933 106652657 0.000000e+00 1748.0
16 TraesCS2D01G166300 chr2A 92.466 1115 44 17 1067 2173 105682155 105683237 0.000000e+00 1557.0
17 TraesCS2D01G166300 chr2A 87.087 999 89 28 2372 3357 105683250 105684221 0.000000e+00 1094.0
18 TraesCS2D01G166300 chr2A 92.982 228 12 3 693 917 353482198 353482424 2.500000e-86 329.0
19 TraesCS2D01G166300 chr2A 88.281 256 24 2 1859 2110 105592054 105592307 5.440000e-78 302.0
20 TraesCS2D01G166300 chr2A 79.452 146 19 8 32 172 566885663 566885802 3.570000e-15 93.5
21 TraesCS2D01G166300 chr7B 93.750 224 13 1 693 915 531664014 531663791 5.370000e-88 335.0
22 TraesCS2D01G166300 chr7B 89.091 55 3 3 405 458 238019419 238019471 7.770000e-07 65.8
23 TraesCS2D01G166300 chr5D 94.091 220 12 1 695 913 484573589 484573808 1.930000e-87 333.0
24 TraesCS2D01G166300 chr5D 93.333 225 13 2 693 915 367670047 367670271 6.940000e-87 331.0
25 TraesCS2D01G166300 chr5D 93.333 225 13 2 693 915 412323300 412323524 6.940000e-87 331.0
26 TraesCS2D01G166300 chr5D 92.952 227 13 3 691 915 98272156 98271931 8.980000e-86 327.0
27 TraesCS2D01G166300 chr5B 93.363 226 10 4 693 915 136138242 136138019 2.500000e-86 329.0
28 TraesCS2D01G166300 chr5B 94.595 37 2 0 608 644 517410593 517410629 1.300000e-04 58.4
29 TraesCS2D01G166300 chr5B 100.000 28 0 0 2670 2697 695810017 695810044 6.000000e-03 52.8
30 TraesCS2D01G166300 chr4D 93.274 223 13 2 694 915 7999172 7999393 8.980000e-86 327.0
31 TraesCS2D01G166300 chr4D 98.113 53 1 0 3184 3236 167124658 167124606 3.570000e-15 93.5
32 TraesCS2D01G166300 chr1D 82.639 144 13 9 32 168 286647570 286647708 2.120000e-22 117.0
33 TraesCS2D01G166300 chr3D 80.986 142 20 4 32 169 591606835 591606697 4.580000e-19 106.0
34 TraesCS2D01G166300 chr1B 80.132 151 21 7 31 172 628502684 628502834 1.650000e-18 104.0
35 TraesCS2D01G166300 chr3B 79.720 143 20 6 35 172 1085963 1086101 9.920000e-16 95.3
36 TraesCS2D01G166300 chr4B 98.113 53 1 0 3184 3236 547038839 547038787 3.570000e-15 93.5
37 TraesCS2D01G166300 chrUn 96.226 53 2 0 3184 3236 233526771 233526823 1.660000e-13 87.9
38 TraesCS2D01G166300 chrUn 96.226 53 2 0 3184 3236 257942609 257942557 1.660000e-13 87.9
39 TraesCS2D01G166300 chrUn 96.226 53 2 0 3184 3236 429574691 429574639 1.660000e-13 87.9
40 TraesCS2D01G166300 chr6D 96.226 53 2 0 3184 3236 83963800 83963852 1.660000e-13 87.9
41 TraesCS2D01G166300 chr6D 100.000 30 0 0 2670 2699 24615398 24615369 4.680000e-04 56.5
42 TraesCS2D01G166300 chr5A 78.723 141 19 7 32 168 155224696 155224829 2.150000e-12 84.2
43 TraesCS2D01G166300 chr4A 78.082 146 23 7 34 172 513183595 513183452 2.150000e-12 84.2
44 TraesCS2D01G166300 chr4A 94.444 36 2 0 2662 2697 667841770 667841805 4.680000e-04 56.5
45 TraesCS2D01G166300 chr3A 80.165 121 17 6 52 168 51598168 51598285 2.150000e-12 84.2
46 TraesCS2D01G166300 chr6A 82.278 79 11 3 359 435 17402902 17402979 7.770000e-07 65.8
47 TraesCS2D01G166300 chr7A 100.000 30 0 0 2670 2699 115821416 115821387 4.680000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G166300 chr2D 110402132 110405488 3356 False 6200.0 6200 100.0000 1 3357 1 chr2D.!!$F3 3356
1 TraesCS2D01G166300 chr2D 109913665 109914239 574 False 821.0 821 92.7340 1610 2174 1 chr2D.!!$F2 564
2 TraesCS2D01G166300 chr2D 110629442 110630546 1104 True 756.0 1408 88.5190 946 2110 2 chr2D.!!$R1 1164
3 TraesCS2D01G166300 chr2D 109905924 109906857 933 False 379.2 676 91.2655 231 1613 2 chr2D.!!$F5 1382
4 TraesCS2D01G166300 chr2B 159600243 159602551 2308 True 1457.8 2824 86.3695 946 3357 2 chr2B.!!$R1 2411
5 TraesCS2D01G166300 chr2B 159573192 159575224 2032 False 1440.0 2615 94.5165 985 3352 2 chr2B.!!$F3 2367
6 TraesCS2D01G166300 chr2A 106652657 106653933 1276 True 1748.0 1748 91.1700 1067 2383 1 chr2A.!!$R1 1316
7 TraesCS2D01G166300 chr2A 105682155 105684221 2066 False 1325.5 1557 89.7765 1067 3357 2 chr2A.!!$F4 2290

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 280 0.033601 TAATTGGATGCAAGGCCGGT 60.034 50.0 5.69 0.0 0.0 5.28 F
280 281 0.033601 AATTGGATGCAAGGCCGGTA 60.034 50.0 5.69 0.0 0.0 4.02 F
919 920 0.036294 AAGAACTGGCCCTAACTCGC 60.036 55.0 0.00 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2371 1.001624 ATTAACGTAAACGAGCGGCC 58.998 50.000 9.86 0.0 43.02 6.13 R
2031 2372 1.655099 TGATTAACGTAAACGAGCGGC 59.345 47.619 9.86 0.0 43.02 6.53 R
2402 2789 2.198287 GGGGTATGCGCTAGGTCGA 61.198 63.158 9.73 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 7.792374 CACACTTAGATGTGCCATAAGTATT 57.208 36.000 0.00 0.00 43.29 1.89
70 71 7.633621 CACACTTAGATGTGCCATAAGTATTG 58.366 38.462 0.00 0.00 43.29 1.90
71 72 6.260936 ACACTTAGATGTGCCATAAGTATTGC 59.739 38.462 0.00 0.00 41.30 3.56
72 73 6.484643 CACTTAGATGTGCCATAAGTATTGCT 59.515 38.462 0.00 0.00 37.59 3.91
73 74 7.657354 CACTTAGATGTGCCATAAGTATTGCTA 59.343 37.037 0.00 0.00 37.59 3.49
74 75 8.210946 ACTTAGATGTGCCATAAGTATTGCTAA 58.789 33.333 0.00 0.00 37.84 3.09
75 76 8.972458 TTAGATGTGCCATAAGTATTGCTAAA 57.028 30.769 0.00 0.00 0.00 1.85
76 77 7.502120 AGATGTGCCATAAGTATTGCTAAAG 57.498 36.000 0.00 0.00 0.00 1.85
77 78 7.056635 AGATGTGCCATAAGTATTGCTAAAGT 58.943 34.615 0.00 0.00 0.00 2.66
78 79 6.677781 TGTGCCATAAGTATTGCTAAAGTC 57.322 37.500 0.00 0.00 0.00 3.01
79 80 6.414732 TGTGCCATAAGTATTGCTAAAGTCT 58.585 36.000 0.00 0.00 0.00 3.24
80 81 6.884295 TGTGCCATAAGTATTGCTAAAGTCTT 59.116 34.615 0.00 0.00 0.00 3.01
81 82 7.148255 TGTGCCATAAGTATTGCTAAAGTCTTG 60.148 37.037 0.00 0.00 0.00 3.02
82 83 6.884295 TGCCATAAGTATTGCTAAAGTCTTGT 59.116 34.615 0.00 0.00 0.00 3.16
83 84 7.148255 TGCCATAAGTATTGCTAAAGTCTTGTG 60.148 37.037 0.00 0.00 0.00 3.33
84 85 7.148239 GCCATAAGTATTGCTAAAGTCTTGTGT 60.148 37.037 0.00 0.00 0.00 3.72
85 86 8.391106 CCATAAGTATTGCTAAAGTCTTGTGTC 58.609 37.037 0.00 0.00 0.00 3.67
86 87 8.935844 CATAAGTATTGCTAAAGTCTTGTGTCA 58.064 33.333 0.00 0.00 0.00 3.58
87 88 7.986085 AAGTATTGCTAAAGTCTTGTGTCAT 57.014 32.000 0.00 0.00 0.00 3.06
89 90 9.502091 AAGTATTGCTAAAGTCTTGTGTCATAA 57.498 29.630 0.00 0.00 0.00 1.90
90 91 9.502091 AGTATTGCTAAAGTCTTGTGTCATAAA 57.498 29.630 0.00 0.00 0.00 1.40
93 94 8.621532 TTGCTAAAGTCTTGTGTCATAAATCT 57.378 30.769 0.00 0.00 0.00 2.40
94 95 8.621532 TGCTAAAGTCTTGTGTCATAAATCTT 57.378 30.769 0.00 0.00 0.00 2.40
95 96 9.719355 TGCTAAAGTCTTGTGTCATAAATCTTA 57.281 29.630 0.00 0.00 0.00 2.10
96 97 9.974750 GCTAAAGTCTTGTGTCATAAATCTTAC 57.025 33.333 0.00 0.00 0.00 2.34
98 99 8.603242 AAAGTCTTGTGTCATAAATCTTACGT 57.397 30.769 0.00 0.00 0.00 3.57
99 100 7.582435 AGTCTTGTGTCATAAATCTTACGTG 57.418 36.000 0.00 0.00 0.00 4.49
100 101 6.590292 AGTCTTGTGTCATAAATCTTACGTGG 59.410 38.462 0.00 0.00 0.00 4.94
101 102 6.588756 GTCTTGTGTCATAAATCTTACGTGGA 59.411 38.462 0.00 0.00 0.00 4.02
102 103 7.117236 GTCTTGTGTCATAAATCTTACGTGGAA 59.883 37.037 0.00 0.00 0.00 3.53
103 104 7.658167 TCTTGTGTCATAAATCTTACGTGGAAA 59.342 33.333 0.00 0.00 0.00 3.13
104 105 7.915293 TGTGTCATAAATCTTACGTGGAAAT 57.085 32.000 0.00 0.00 0.00 2.17
105 106 8.330466 TGTGTCATAAATCTTACGTGGAAATT 57.670 30.769 0.00 0.00 0.00 1.82
106 107 8.447833 TGTGTCATAAATCTTACGTGGAAATTC 58.552 33.333 0.00 0.00 0.00 2.17
107 108 8.447833 GTGTCATAAATCTTACGTGGAAATTCA 58.552 33.333 0.00 0.00 0.00 2.57
108 109 9.173021 TGTCATAAATCTTACGTGGAAATTCAT 57.827 29.630 0.00 0.00 0.00 2.57
109 110 9.438291 GTCATAAATCTTACGTGGAAATTCATG 57.562 33.333 0.00 0.00 0.00 3.07
110 111 9.173021 TCATAAATCTTACGTGGAAATTCATGT 57.827 29.630 0.00 0.00 39.81 3.21
111 112 9.225201 CATAAATCTTACGTGGAAATTCATGTG 57.775 33.333 0.00 0.00 37.44 3.21
112 113 7.447374 AAATCTTACGTGGAAATTCATGTGA 57.553 32.000 0.00 0.00 37.44 3.58
113 114 7.447374 AATCTTACGTGGAAATTCATGTGAA 57.553 32.000 0.00 0.00 37.44 3.18
114 115 7.630242 ATCTTACGTGGAAATTCATGTGAAT 57.370 32.000 0.00 2.48 45.91 2.57
115 116 8.731275 ATCTTACGTGGAAATTCATGTGAATA 57.269 30.769 8.54 0.00 43.41 1.75
116 117 8.554835 TCTTACGTGGAAATTCATGTGAATAA 57.445 30.769 8.54 0.00 43.41 1.40
117 118 9.173021 TCTTACGTGGAAATTCATGTGAATAAT 57.827 29.630 8.54 1.91 43.41 1.28
118 119 9.787532 CTTACGTGGAAATTCATGTGAATAATT 57.212 29.630 8.54 1.21 43.41 1.40
121 122 9.487790 ACGTGGAAATTCATGTGAATAATTTTT 57.512 25.926 8.54 0.67 43.41 1.94
147 148 9.775854 TTTCCTTTTCATTTTATGCTTGATTGA 57.224 25.926 0.00 0.00 0.00 2.57
148 149 8.991243 TCCTTTTCATTTTATGCTTGATTGAG 57.009 30.769 0.00 0.00 0.00 3.02
149 150 8.587608 TCCTTTTCATTTTATGCTTGATTGAGT 58.412 29.630 0.00 0.00 0.00 3.41
150 151 8.866956 CCTTTTCATTTTATGCTTGATTGAGTC 58.133 33.333 0.00 0.00 0.00 3.36
151 152 9.414295 CTTTTCATTTTATGCTTGATTGAGTCA 57.586 29.630 0.00 0.00 34.25 3.41
152 153 8.746922 TTTCATTTTATGCTTGATTGAGTCAC 57.253 30.769 0.00 0.00 36.32 3.67
153 154 7.692460 TCATTTTATGCTTGATTGAGTCACT 57.308 32.000 0.00 0.00 36.32 3.41
154 155 8.114331 TCATTTTATGCTTGATTGAGTCACTT 57.886 30.769 0.00 0.00 36.32 3.16
155 156 9.230122 TCATTTTATGCTTGATTGAGTCACTTA 57.770 29.630 0.00 0.00 36.32 2.24
156 157 9.499585 CATTTTATGCTTGATTGAGTCACTTAG 57.500 33.333 0.00 0.00 36.32 2.18
157 158 8.846943 TTTTATGCTTGATTGAGTCACTTAGA 57.153 30.769 0.00 0.00 36.32 2.10
158 159 9.453572 TTTTATGCTTGATTGAGTCACTTAGAT 57.546 29.630 0.00 0.00 36.32 1.98
159 160 6.922247 ATGCTTGATTGAGTCACTTAGATG 57.078 37.500 0.00 0.00 36.32 2.90
160 161 5.798132 TGCTTGATTGAGTCACTTAGATGT 58.202 37.500 0.00 0.00 36.32 3.06
161 162 5.640783 TGCTTGATTGAGTCACTTAGATGTG 59.359 40.000 0.00 0.00 36.32 3.21
162 163 5.447010 GCTTGATTGAGTCACTTAGATGTGC 60.447 44.000 0.00 0.00 36.32 4.57
163 164 5.151297 TGATTGAGTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
164 165 5.550290 TGATTGAGTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
165 166 6.175471 TGATTGAGTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
166 167 7.330262 TGATTGAGTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
167 168 7.823799 TGATTGAGTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
168 169 6.968131 TGAGTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
169 170 6.463360 TGAGTCACTTAGATGTGCAATAACA 58.537 36.000 0.00 0.00 37.81 2.41
170 171 6.934083 TGAGTCACTTAGATGTGCAATAACAA 59.066 34.615 0.00 0.00 37.81 2.83
171 172 7.118245 TGAGTCACTTAGATGTGCAATAACAAG 59.882 37.037 0.00 0.00 37.81 3.16
172 173 7.161404 AGTCACTTAGATGTGCAATAACAAGA 58.839 34.615 0.00 0.00 37.81 3.02
173 174 7.826252 AGTCACTTAGATGTGCAATAACAAGAT 59.174 33.333 0.00 0.00 37.81 2.40
174 175 9.098355 GTCACTTAGATGTGCAATAACAAGATA 57.902 33.333 0.00 0.00 37.81 1.98
175 176 9.836864 TCACTTAGATGTGCAATAACAAGATAT 57.163 29.630 0.00 0.00 37.81 1.63
176 177 9.874215 CACTTAGATGTGCAATAACAAGATATG 57.126 33.333 0.00 0.00 32.81 1.78
177 178 9.618890 ACTTAGATGTGCAATAACAAGATATGT 57.381 29.630 0.00 0.00 46.82 2.29
179 180 9.836864 TTAGATGTGCAATAACAAGATATGTCT 57.163 29.630 0.00 0.00 42.99 3.41
180 181 8.743085 AGATGTGCAATAACAAGATATGTCTT 57.257 30.769 0.00 0.00 45.46 3.01
181 182 9.836864 AGATGTGCAATAACAAGATATGTCTTA 57.163 29.630 4.20 0.00 42.73 2.10
183 184 8.437360 TGTGCAATAACAAGATATGTCTTAGG 57.563 34.615 4.20 0.00 42.73 2.69
184 185 7.012327 TGTGCAATAACAAGATATGTCTTAGGC 59.988 37.037 4.20 3.85 42.73 3.93
185 186 7.012327 GTGCAATAACAAGATATGTCTTAGGCA 59.988 37.037 4.20 6.09 42.73 4.75
186 187 7.012327 TGCAATAACAAGATATGTCTTAGGCAC 59.988 37.037 4.20 0.00 42.73 5.01
187 188 7.012327 GCAATAACAAGATATGTCTTAGGCACA 59.988 37.037 4.20 0.00 42.73 4.57
188 189 8.338259 CAATAACAAGATATGTCTTAGGCACAC 58.662 37.037 4.20 0.00 42.73 3.82
189 190 5.683876 ACAAGATATGTCTTAGGCACACT 57.316 39.130 4.20 0.00 42.73 3.55
190 191 6.054860 ACAAGATATGTCTTAGGCACACTT 57.945 37.500 4.20 0.00 42.73 3.16
191 192 6.476378 ACAAGATATGTCTTAGGCACACTTT 58.524 36.000 4.20 0.00 42.73 2.66
192 193 6.942576 ACAAGATATGTCTTAGGCACACTTTT 59.057 34.615 4.20 0.00 42.73 2.27
193 194 7.448469 ACAAGATATGTCTTAGGCACACTTTTT 59.552 33.333 4.20 0.00 42.73 1.94
194 195 7.383102 AGATATGTCTTAGGCACACTTTTTG 57.617 36.000 0.00 0.00 0.00 2.44
195 196 6.942576 AGATATGTCTTAGGCACACTTTTTGT 59.057 34.615 0.00 0.00 39.97 2.83
196 197 8.100791 AGATATGTCTTAGGCACACTTTTTGTA 58.899 33.333 0.00 0.00 35.67 2.41
197 198 6.952773 ATGTCTTAGGCACACTTTTTGTAA 57.047 33.333 0.00 0.00 35.67 2.41
198 199 6.952773 TGTCTTAGGCACACTTTTTGTAAT 57.047 33.333 0.00 0.00 35.67 1.89
199 200 6.734137 TGTCTTAGGCACACTTTTTGTAATG 58.266 36.000 0.00 0.00 35.67 1.90
200 201 5.629435 GTCTTAGGCACACTTTTTGTAATGC 59.371 40.000 0.00 0.00 35.67 3.56
201 202 3.011949 AGGCACACTTTTTGTAATGCG 57.988 42.857 0.00 0.00 39.49 4.73
202 203 2.360801 AGGCACACTTTTTGTAATGCGT 59.639 40.909 0.00 0.00 39.49 5.24
203 204 3.566322 AGGCACACTTTTTGTAATGCGTA 59.434 39.130 0.00 0.00 39.49 4.42
204 205 3.911964 GGCACACTTTTTGTAATGCGTAG 59.088 43.478 0.00 0.00 39.49 3.51
205 206 3.911964 GCACACTTTTTGTAATGCGTAGG 59.088 43.478 0.00 0.00 35.67 3.18
206 207 3.911964 CACACTTTTTGTAATGCGTAGGC 59.088 43.478 0.00 0.00 35.67 3.93
207 208 3.566322 ACACTTTTTGTAATGCGTAGGCA 59.434 39.130 13.21 13.21 45.82 4.75
208 209 4.555906 ACACTTTTTGTAATGCGTAGGCAC 60.556 41.667 13.09 0.65 44.98 5.01
209 210 7.750929 ACACTTTTTGTAATGCGTAGGCACG 62.751 44.000 13.09 5.33 44.98 5.34
219 220 2.304751 CGTAGGCACGGTATCCTTTT 57.695 50.000 6.46 0.00 44.59 2.27
220 221 1.931172 CGTAGGCACGGTATCCTTTTG 59.069 52.381 6.46 0.00 44.59 2.44
221 222 2.675889 CGTAGGCACGGTATCCTTTTGT 60.676 50.000 6.46 0.00 44.59 2.83
222 223 2.109425 AGGCACGGTATCCTTTTGTC 57.891 50.000 0.00 0.00 0.00 3.18
223 224 0.725117 GGCACGGTATCCTTTTGTCG 59.275 55.000 0.00 0.00 0.00 4.35
224 225 1.435577 GCACGGTATCCTTTTGTCGT 58.564 50.000 0.00 0.00 0.00 4.34
225 226 2.609350 GCACGGTATCCTTTTGTCGTA 58.391 47.619 0.00 0.00 0.00 3.43
226 227 3.192466 GCACGGTATCCTTTTGTCGTAT 58.808 45.455 0.00 0.00 0.00 3.06
227 228 3.619929 GCACGGTATCCTTTTGTCGTATT 59.380 43.478 0.00 0.00 0.00 1.89
228 229 4.493545 GCACGGTATCCTTTTGTCGTATTG 60.494 45.833 0.00 0.00 0.00 1.90
229 230 4.033587 CACGGTATCCTTTTGTCGTATTGG 59.966 45.833 0.00 0.00 0.00 3.16
242 243 6.835819 TGTCGTATTGGCTAGCTATAATCT 57.164 37.500 15.72 0.00 0.00 2.40
243 244 6.853720 TGTCGTATTGGCTAGCTATAATCTC 58.146 40.000 15.72 8.96 0.00 2.75
244 245 6.659668 TGTCGTATTGGCTAGCTATAATCTCT 59.340 38.462 15.72 0.00 0.00 3.10
245 246 7.148222 TGTCGTATTGGCTAGCTATAATCTCTC 60.148 40.741 15.72 6.46 0.00 3.20
246 247 6.037281 TCGTATTGGCTAGCTATAATCTCTCG 59.963 42.308 15.72 10.79 0.00 4.04
247 248 5.590530 ATTGGCTAGCTATAATCTCTCGG 57.409 43.478 15.72 0.00 0.00 4.63
248 249 4.035612 TGGCTAGCTATAATCTCTCGGT 57.964 45.455 15.72 0.00 0.00 4.69
249 250 4.408276 TGGCTAGCTATAATCTCTCGGTT 58.592 43.478 15.72 0.00 0.00 4.44
250 251 4.833380 TGGCTAGCTATAATCTCTCGGTTT 59.167 41.667 15.72 0.00 0.00 3.27
251 252 5.164954 GGCTAGCTATAATCTCTCGGTTTG 58.835 45.833 15.72 0.00 0.00 2.93
252 253 5.279056 GGCTAGCTATAATCTCTCGGTTTGT 60.279 44.000 15.72 0.00 0.00 2.83
253 254 6.217294 GCTAGCTATAATCTCTCGGTTTGTT 58.783 40.000 7.70 0.00 0.00 2.83
254 255 7.368833 GCTAGCTATAATCTCTCGGTTTGTTA 58.631 38.462 7.70 0.00 0.00 2.41
255 256 7.866393 GCTAGCTATAATCTCTCGGTTTGTTAA 59.134 37.037 7.70 0.00 0.00 2.01
256 257 9.400638 CTAGCTATAATCTCTCGGTTTGTTAAG 57.599 37.037 0.00 0.00 0.00 1.85
257 258 7.783042 AGCTATAATCTCTCGGTTTGTTAAGT 58.217 34.615 0.00 0.00 0.00 2.24
258 259 7.921745 AGCTATAATCTCTCGGTTTGTTAAGTC 59.078 37.037 0.00 0.00 0.00 3.01
259 260 7.921745 GCTATAATCTCTCGGTTTGTTAAGTCT 59.078 37.037 0.00 0.00 0.00 3.24
260 261 9.804758 CTATAATCTCTCGGTTTGTTAAGTCTT 57.195 33.333 0.00 0.00 0.00 3.01
264 265 9.503399 AATCTCTCGGTTTGTTAAGTCTTAATT 57.497 29.630 8.27 0.00 0.00 1.40
265 266 8.306680 TCTCTCGGTTTGTTAAGTCTTAATTG 57.693 34.615 8.27 0.00 0.00 2.32
266 267 7.386848 TCTCTCGGTTTGTTAAGTCTTAATTGG 59.613 37.037 8.27 0.00 0.00 3.16
267 268 7.218614 TCTCGGTTTGTTAAGTCTTAATTGGA 58.781 34.615 8.27 1.40 0.00 3.53
268 269 7.881232 TCTCGGTTTGTTAAGTCTTAATTGGAT 59.119 33.333 8.27 0.00 0.00 3.41
269 270 7.812648 TCGGTTTGTTAAGTCTTAATTGGATG 58.187 34.615 8.27 0.00 0.00 3.51
270 271 6.526674 CGGTTTGTTAAGTCTTAATTGGATGC 59.473 38.462 8.27 0.00 0.00 3.91
271 272 7.375053 GGTTTGTTAAGTCTTAATTGGATGCA 58.625 34.615 8.27 0.00 0.00 3.96
272 273 7.870445 GGTTTGTTAAGTCTTAATTGGATGCAA 59.130 33.333 8.27 0.79 0.00 4.08
273 274 8.915654 GTTTGTTAAGTCTTAATTGGATGCAAG 58.084 33.333 5.69 0.00 0.00 4.01
274 275 7.156876 TGTTAAGTCTTAATTGGATGCAAGG 57.843 36.000 5.69 0.00 0.00 3.61
275 276 4.725790 AAGTCTTAATTGGATGCAAGGC 57.274 40.909 5.69 0.00 0.00 4.35
276 277 3.026694 AGTCTTAATTGGATGCAAGGCC 58.973 45.455 5.69 0.00 0.00 5.19
277 278 2.023673 TCTTAATTGGATGCAAGGCCG 58.976 47.619 5.69 0.00 0.00 6.13
278 279 1.067516 CTTAATTGGATGCAAGGCCGG 59.932 52.381 5.69 0.00 0.00 6.13
279 280 0.033601 TAATTGGATGCAAGGCCGGT 60.034 50.000 5.69 0.00 0.00 5.28
280 281 0.033601 AATTGGATGCAAGGCCGGTA 60.034 50.000 5.69 0.00 0.00 4.02
281 282 0.185901 ATTGGATGCAAGGCCGGTAT 59.814 50.000 5.69 0.00 0.00 2.73
282 283 0.840617 TTGGATGCAAGGCCGGTATA 59.159 50.000 1.90 0.00 0.00 1.47
283 284 0.840617 TGGATGCAAGGCCGGTATAA 59.159 50.000 1.90 0.00 0.00 0.98
284 285 1.213182 TGGATGCAAGGCCGGTATAAA 59.787 47.619 1.90 0.00 0.00 1.40
285 286 2.303175 GGATGCAAGGCCGGTATAAAA 58.697 47.619 1.90 0.00 0.00 1.52
286 287 2.691011 GGATGCAAGGCCGGTATAAAAA 59.309 45.455 1.90 0.00 0.00 1.94
287 288 3.320826 GGATGCAAGGCCGGTATAAAAAT 59.679 43.478 1.90 0.00 0.00 1.82
288 289 4.202212 GGATGCAAGGCCGGTATAAAAATT 60.202 41.667 1.90 0.00 0.00 1.82
289 290 4.116747 TGCAAGGCCGGTATAAAAATTG 57.883 40.909 1.90 0.00 0.00 2.32
290 291 3.118956 TGCAAGGCCGGTATAAAAATTGG 60.119 43.478 1.90 0.00 0.00 3.16
291 292 3.131400 GCAAGGCCGGTATAAAAATTGGA 59.869 43.478 1.90 0.00 0.00 3.53
292 293 4.678622 CAAGGCCGGTATAAAAATTGGAC 58.321 43.478 1.90 0.00 0.00 4.02
293 294 3.293337 AGGCCGGTATAAAAATTGGACC 58.707 45.455 1.90 0.00 0.00 4.46
294 295 3.053170 AGGCCGGTATAAAAATTGGACCT 60.053 43.478 1.90 0.00 0.00 3.85
295 296 4.166531 AGGCCGGTATAAAAATTGGACCTA 59.833 41.667 1.90 0.00 0.00 3.08
296 297 4.888823 GGCCGGTATAAAAATTGGACCTAA 59.111 41.667 1.90 0.00 0.00 2.69
297 298 5.221106 GGCCGGTATAAAAATTGGACCTAAC 60.221 44.000 1.90 0.00 0.00 2.34
298 299 5.591472 GCCGGTATAAAAATTGGACCTAACT 59.409 40.000 1.90 0.00 0.00 2.24
299 300 6.767423 GCCGGTATAAAAATTGGACCTAACTA 59.233 38.462 1.90 0.00 0.00 2.24
300 301 7.041576 GCCGGTATAAAAATTGGACCTAACTAG 60.042 40.741 1.90 0.00 0.00 2.57
301 302 7.989170 CCGGTATAAAAATTGGACCTAACTAGT 59.011 37.037 0.00 0.00 0.00 2.57
302 303 9.387257 CGGTATAAAAATTGGACCTAACTAGTT 57.613 33.333 13.68 13.68 0.00 2.24
316 317 6.104665 CCTAACTAGTTGTTTGGGTAGTAGC 58.895 44.000 18.56 0.00 44.21 3.58
317 318 4.548451 ACTAGTTGTTTGGGTAGTAGCC 57.452 45.455 11.65 11.65 36.00 3.93
318 319 2.467566 AGTTGTTTGGGTAGTAGCCG 57.532 50.000 13.58 0.00 38.98 5.52
319 320 1.002773 AGTTGTTTGGGTAGTAGCCGG 59.997 52.381 13.58 0.00 38.98 6.13
320 321 1.058284 TTGTTTGGGTAGTAGCCGGT 58.942 50.000 13.58 0.00 38.98 5.28
321 322 1.935799 TGTTTGGGTAGTAGCCGGTA 58.064 50.000 13.58 0.00 38.98 4.02
322 323 2.469952 TGTTTGGGTAGTAGCCGGTAT 58.530 47.619 13.58 0.00 38.98 2.73
323 324 3.641046 TGTTTGGGTAGTAGCCGGTATA 58.359 45.455 13.58 0.00 38.98 1.47
324 325 4.029520 TGTTTGGGTAGTAGCCGGTATAA 58.970 43.478 13.58 0.00 38.98 0.98
325 326 4.469227 TGTTTGGGTAGTAGCCGGTATAAA 59.531 41.667 13.58 5.46 38.98 1.40
326 327 5.046014 TGTTTGGGTAGTAGCCGGTATAAAA 60.046 40.000 13.58 4.80 38.98 1.52
327 328 5.690464 TTGGGTAGTAGCCGGTATAAAAA 57.310 39.130 13.58 0.00 38.98 1.94
370 371 8.450385 AAAATGTGCACTTTTTCAAAACAATG 57.550 26.923 28.29 0.00 30.47 2.82
371 372 6.740411 ATGTGCACTTTTTCAAAACAATGT 57.260 29.167 19.41 0.00 0.00 2.71
372 373 6.551385 TGTGCACTTTTTCAAAACAATGTT 57.449 29.167 19.41 0.00 0.00 2.71
373 374 6.597614 TGTGCACTTTTTCAAAACAATGTTC 58.402 32.000 19.41 0.00 0.00 3.18
374 375 6.203530 TGTGCACTTTTTCAAAACAATGTTCA 59.796 30.769 19.41 0.00 0.00 3.18
375 376 7.094890 TGTGCACTTTTTCAAAACAATGTTCAT 60.095 29.630 19.41 0.00 0.00 2.57
376 377 7.216693 GTGCACTTTTTCAAAACAATGTTCATG 59.783 33.333 10.32 2.36 0.00 3.07
377 378 7.118825 TGCACTTTTTCAAAACAATGTTCATGA 59.881 29.630 0.00 4.84 0.00 3.07
378 379 7.961827 GCACTTTTTCAAAACAATGTTCATGAA 59.038 29.630 17.62 17.62 0.00 2.57
379 380 9.991388 CACTTTTTCAAAACAATGTTCATGAAT 57.009 25.926 20.39 9.08 0.00 2.57
411 412 7.903995 AAATGTTCGGCAATATGAAAAATGT 57.096 28.000 0.00 0.00 0.00 2.71
412 413 7.903995 AATGTTCGGCAATATGAAAAATGTT 57.096 28.000 0.00 0.00 0.00 2.71
413 414 6.942886 TGTTCGGCAATATGAAAAATGTTC 57.057 33.333 0.00 0.00 0.00 3.18
414 415 6.450545 TGTTCGGCAATATGAAAAATGTTCA 58.549 32.000 0.00 0.00 0.00 3.18
415 416 7.095910 TGTTCGGCAATATGAAAAATGTTCAT 58.904 30.769 3.90 3.90 41.54 2.57
416 417 8.246871 TGTTCGGCAATATGAAAAATGTTCATA 58.753 29.630 8.19 8.19 43.17 2.15
417 418 9.081997 GTTCGGCAATATGAAAAATGTTCATAA 57.918 29.630 9.67 0.00 42.54 1.90
418 419 9.814899 TTCGGCAATATGAAAAATGTTCATAAT 57.185 25.926 9.67 0.00 42.54 1.28
419 420 9.814899 TCGGCAATATGAAAAATGTTCATAATT 57.185 25.926 9.67 3.43 42.54 1.40
466 467 9.862585 AAGAAAAATTGTTCGCAAATTTGATAC 57.137 25.926 22.31 14.72 38.74 2.24
467 468 8.213812 AGAAAAATTGTTCGCAAATTTGATACG 58.786 29.630 22.31 15.18 38.74 3.06
468 469 7.401484 AAAATTGTTCGCAAATTTGATACGT 57.599 28.000 22.31 0.00 38.39 3.57
469 470 5.990745 ATTGTTCGCAAATTTGATACGTG 57.009 34.783 22.31 1.01 40.90 4.49
470 471 3.816091 TGTTCGCAAATTTGATACGTGG 58.184 40.909 22.31 1.75 0.00 4.94
471 472 2.535934 TCGCAAATTTGATACGTGGC 57.464 45.000 22.31 2.63 0.00 5.01
472 473 1.131504 TCGCAAATTTGATACGTGGCC 59.868 47.619 22.31 0.00 0.00 5.36
473 474 1.544686 GCAAATTTGATACGTGGCCG 58.455 50.000 22.31 0.00 40.83 6.13
474 475 1.131504 GCAAATTTGATACGTGGCCGA 59.868 47.619 22.31 0.00 37.88 5.54
475 476 2.414824 GCAAATTTGATACGTGGCCGAA 60.415 45.455 22.31 0.00 37.88 4.30
476 477 3.733684 GCAAATTTGATACGTGGCCGAAT 60.734 43.478 22.31 0.00 37.88 3.34
477 478 4.496673 GCAAATTTGATACGTGGCCGAATA 60.497 41.667 22.31 0.00 37.88 1.75
478 479 5.757886 CAAATTTGATACGTGGCCGAATAT 58.242 37.500 13.08 0.00 37.88 1.28
479 480 6.205784 CAAATTTGATACGTGGCCGAATATT 58.794 36.000 13.08 0.00 37.88 1.28
480 481 6.385649 AATTTGATACGTGGCCGAATATTT 57.614 33.333 0.00 0.00 37.88 1.40
481 482 5.821516 TTTGATACGTGGCCGAATATTTT 57.178 34.783 0.00 0.00 37.88 1.82
482 483 5.821516 TTGATACGTGGCCGAATATTTTT 57.178 34.783 0.00 0.00 37.88 1.94
483 484 6.922247 TTGATACGTGGCCGAATATTTTTA 57.078 33.333 0.00 0.00 37.88 1.52
484 485 6.533819 TGATACGTGGCCGAATATTTTTAG 57.466 37.500 0.00 0.00 37.88 1.85
485 486 6.282167 TGATACGTGGCCGAATATTTTTAGA 58.718 36.000 0.00 0.00 37.88 2.10
486 487 6.762187 TGATACGTGGCCGAATATTTTTAGAA 59.238 34.615 0.00 0.00 37.88 2.10
487 488 5.883503 ACGTGGCCGAATATTTTTAGAAA 57.116 34.783 0.00 0.00 37.88 2.52
488 489 6.256912 ACGTGGCCGAATATTTTTAGAAAA 57.743 33.333 0.00 0.00 37.88 2.29
489 490 6.859017 ACGTGGCCGAATATTTTTAGAAAAT 58.141 32.000 0.00 4.32 37.88 1.82
490 491 6.750039 ACGTGGCCGAATATTTTTAGAAAATG 59.250 34.615 0.00 0.00 37.88 2.32
491 492 6.750039 CGTGGCCGAATATTTTTAGAAAATGT 59.250 34.615 0.00 0.30 35.63 2.71
492 493 7.253618 CGTGGCCGAATATTTTTAGAAAATGTG 60.254 37.037 0.00 0.00 35.63 3.21
493 494 7.757624 GTGGCCGAATATTTTTAGAAAATGTGA 59.242 33.333 0.00 0.00 0.00 3.58
494 495 8.307483 TGGCCGAATATTTTTAGAAAATGTGAA 58.693 29.630 0.00 0.00 0.00 3.18
495 496 9.145865 GGCCGAATATTTTTAGAAAATGTGAAA 57.854 29.630 8.48 0.00 0.00 2.69
509 510 9.559732 AGAAAATGTGAAAATAAGGGGAAAAAG 57.440 29.630 0.00 0.00 0.00 2.27
510 511 9.554395 GAAAATGTGAAAATAAGGGGAAAAAGA 57.446 29.630 0.00 0.00 0.00 2.52
511 512 9.913310 AAAATGTGAAAATAAGGGGAAAAAGAA 57.087 25.926 0.00 0.00 0.00 2.52
512 513 9.913310 AAATGTGAAAATAAGGGGAAAAAGAAA 57.087 25.926 0.00 0.00 0.00 2.52
513 514 9.913310 AATGTGAAAATAAGGGGAAAAAGAAAA 57.087 25.926 0.00 0.00 0.00 2.29
514 515 9.913310 ATGTGAAAATAAGGGGAAAAAGAAAAA 57.087 25.926 0.00 0.00 0.00 1.94
515 516 9.168451 TGTGAAAATAAGGGGAAAAAGAAAAAC 57.832 29.630 0.00 0.00 0.00 2.43
516 517 9.168451 GTGAAAATAAGGGGAAAAAGAAAAACA 57.832 29.630 0.00 0.00 0.00 2.83
517 518 9.389755 TGAAAATAAGGGGAAAAAGAAAAACAG 57.610 29.630 0.00 0.00 0.00 3.16
518 519 9.607988 GAAAATAAGGGGAAAAAGAAAAACAGA 57.392 29.630 0.00 0.00 0.00 3.41
519 520 9.967451 AAAATAAGGGGAAAAAGAAAAACAGAA 57.033 25.926 0.00 0.00 0.00 3.02
520 521 8.958119 AATAAGGGGAAAAAGAAAAACAGAAC 57.042 30.769 0.00 0.00 0.00 3.01
521 522 6.367374 AAGGGGAAAAAGAAAAACAGAACA 57.633 33.333 0.00 0.00 0.00 3.18
522 523 6.560003 AGGGGAAAAAGAAAAACAGAACAT 57.440 33.333 0.00 0.00 0.00 2.71
523 524 6.957631 AGGGGAAAAAGAAAAACAGAACATT 58.042 32.000 0.00 0.00 0.00 2.71
524 525 8.084985 AGGGGAAAAAGAAAAACAGAACATTA 57.915 30.769 0.00 0.00 0.00 1.90
525 526 8.544622 AGGGGAAAAAGAAAAACAGAACATTAA 58.455 29.630 0.00 0.00 0.00 1.40
526 527 9.337396 GGGGAAAAAGAAAAACAGAACATTAAT 57.663 29.630 0.00 0.00 0.00 1.40
626 627 6.749036 AAAAGGTTCTGAGAAGGTTCTAGA 57.251 37.500 0.00 0.00 37.73 2.43
627 628 6.749036 AAAGGTTCTGAGAAGGTTCTAGAA 57.251 37.500 0.00 0.00 37.73 2.10
628 629 5.731957 AGGTTCTGAGAAGGTTCTAGAAC 57.268 43.478 24.73 24.73 41.20 3.01
642 643 6.905544 GTTCTAGAACCTTCCTAAAATCGG 57.094 41.667 22.74 0.00 35.36 4.18
643 644 6.404708 GTTCTAGAACCTTCCTAAAATCGGT 58.595 40.000 22.74 0.00 35.36 4.69
644 645 5.974108 TCTAGAACCTTCCTAAAATCGGTG 58.026 41.667 0.00 0.00 0.00 4.94
645 646 3.951663 AGAACCTTCCTAAAATCGGTGG 58.048 45.455 0.00 0.00 0.00 4.61
646 647 2.801077 ACCTTCCTAAAATCGGTGGG 57.199 50.000 0.00 0.00 0.00 4.61
647 648 1.283905 ACCTTCCTAAAATCGGTGGGG 59.716 52.381 0.00 0.00 0.00 4.96
648 649 1.562475 CCTTCCTAAAATCGGTGGGGA 59.438 52.381 0.00 0.00 0.00 4.81
649 650 2.421529 CCTTCCTAAAATCGGTGGGGAG 60.422 54.545 0.00 0.00 0.00 4.30
650 651 1.209621 TCCTAAAATCGGTGGGGAGG 58.790 55.000 0.00 0.00 0.00 4.30
651 652 1.209621 CCTAAAATCGGTGGGGAGGA 58.790 55.000 0.00 0.00 0.00 3.71
652 653 1.562475 CCTAAAATCGGTGGGGAGGAA 59.438 52.381 0.00 0.00 0.00 3.36
653 654 2.174854 CCTAAAATCGGTGGGGAGGAAT 59.825 50.000 0.00 0.00 0.00 3.01
654 655 2.437085 AAAATCGGTGGGGAGGAATC 57.563 50.000 0.00 0.00 0.00 2.52
655 656 0.551396 AAATCGGTGGGGAGGAATCC 59.449 55.000 0.00 0.00 0.00 3.01
656 657 0.327576 AATCGGTGGGGAGGAATCCT 60.328 55.000 0.00 0.00 36.03 3.24
657 658 0.566176 ATCGGTGGGGAGGAATCCTA 59.434 55.000 0.00 0.00 31.76 2.94
658 659 0.566176 TCGGTGGGGAGGAATCCTAT 59.434 55.000 0.00 0.00 31.76 2.57
659 660 1.790779 TCGGTGGGGAGGAATCCTATA 59.209 52.381 0.00 0.00 31.76 1.31
660 661 2.385765 TCGGTGGGGAGGAATCCTATAT 59.614 50.000 0.00 0.00 31.76 0.86
661 662 2.501723 CGGTGGGGAGGAATCCTATATG 59.498 54.545 0.00 0.00 31.76 1.78
662 663 2.846827 GGTGGGGAGGAATCCTATATGG 59.153 54.545 0.00 0.00 31.76 2.74
663 664 2.846827 GTGGGGAGGAATCCTATATGGG 59.153 54.545 0.00 0.00 31.76 4.00
664 665 1.847088 GGGGAGGAATCCTATATGGGC 59.153 57.143 0.00 0.00 31.76 5.36
665 666 1.486726 GGGAGGAATCCTATATGGGCG 59.513 57.143 0.00 0.00 31.76 6.13
666 667 1.486726 GGAGGAATCCTATATGGGCGG 59.513 57.143 0.00 0.00 31.76 6.13
667 668 1.486726 GAGGAATCCTATATGGGCGGG 59.513 57.143 0.00 0.00 31.76 6.13
668 669 0.107165 GGAATCCTATATGGGCGGGC 60.107 60.000 0.00 0.00 36.20 6.13
669 670 0.107165 GAATCCTATATGGGCGGGCC 60.107 60.000 14.65 14.65 36.20 5.80
679 680 4.377708 GGCGGGCCCAAAAAGCTG 62.378 66.667 24.92 3.18 0.00 4.24
681 682 4.722855 CGGGCCCAAAAAGCTGCG 62.723 66.667 24.92 0.00 0.00 5.18
682 683 4.377708 GGGCCCAAAAAGCTGCGG 62.378 66.667 19.95 0.00 0.00 5.69
683 684 3.302344 GGCCCAAAAAGCTGCGGA 61.302 61.111 0.00 0.00 0.00 5.54
684 685 2.049156 GCCCAAAAAGCTGCGGAC 60.049 61.111 0.00 0.00 0.00 4.79
685 686 2.564721 GCCCAAAAAGCTGCGGACT 61.565 57.895 0.00 0.00 0.00 3.85
686 687 1.241315 GCCCAAAAAGCTGCGGACTA 61.241 55.000 0.00 0.00 0.00 2.59
687 688 0.521735 CCCAAAAAGCTGCGGACTAC 59.478 55.000 0.00 0.00 0.00 2.73
697 698 2.025727 CGGACTACGCGCTAAGGG 59.974 66.667 5.73 0.00 34.82 3.95
698 699 2.279318 GGACTACGCGCTAAGGGC 60.279 66.667 5.73 0.00 38.15 5.19
699 700 2.279318 GACTACGCGCTAAGGGCC 60.279 66.667 5.73 0.00 38.28 5.80
700 701 3.072468 ACTACGCGCTAAGGGCCA 61.072 61.111 5.73 0.00 38.28 5.36
701 702 2.279517 CTACGCGCTAAGGGCCAG 60.280 66.667 5.73 0.00 38.28 4.85
702 703 3.072468 TACGCGCTAAGGGCCAGT 61.072 61.111 5.73 0.00 38.28 4.00
703 704 2.573609 CTACGCGCTAAGGGCCAGTT 62.574 60.000 5.73 0.00 38.28 3.16
704 705 2.175035 TACGCGCTAAGGGCCAGTTT 62.175 55.000 5.73 0.00 38.28 2.66
705 706 2.332654 CGCGCTAAGGGCCAGTTTT 61.333 57.895 6.18 0.00 38.28 2.43
706 707 1.862602 CGCGCTAAGGGCCAGTTTTT 61.863 55.000 6.18 0.00 38.28 1.94
737 738 4.535526 TTTTTGGGCTTCCAGAATAAGC 57.464 40.909 0.00 0.00 46.90 3.09
738 739 3.456380 TTTGGGCTTCCAGAATAAGCT 57.544 42.857 7.65 0.00 46.81 3.74
739 740 4.584638 TTTGGGCTTCCAGAATAAGCTA 57.415 40.909 7.65 0.00 46.81 3.32
740 741 3.560636 TGGGCTTCCAGAATAAGCTAC 57.439 47.619 7.65 2.85 46.81 3.58
741 742 2.172717 TGGGCTTCCAGAATAAGCTACC 59.827 50.000 7.65 2.72 46.81 3.18
742 743 2.487445 GGGCTTCCAGAATAAGCTACCC 60.487 54.545 7.65 0.00 46.81 3.69
743 744 2.487445 GGCTTCCAGAATAAGCTACCCC 60.487 54.545 7.65 0.00 46.81 4.95
744 745 2.487445 GCTTCCAGAATAAGCTACCCCC 60.487 54.545 0.00 0.00 44.75 5.40
745 746 2.889522 TCCAGAATAAGCTACCCCCT 57.110 50.000 0.00 0.00 0.00 4.79
746 747 4.232091 CTTCCAGAATAAGCTACCCCCTA 58.768 47.826 0.00 0.00 0.00 3.53
747 748 3.584294 TCCAGAATAAGCTACCCCCTAC 58.416 50.000 0.00 0.00 0.00 3.18
748 749 2.638363 CCAGAATAAGCTACCCCCTACC 59.362 54.545 0.00 0.00 0.00 3.18
749 750 2.638363 CAGAATAAGCTACCCCCTACCC 59.362 54.545 0.00 0.00 0.00 3.69
750 751 1.622312 GAATAAGCTACCCCCTACCCG 59.378 57.143 0.00 0.00 0.00 5.28
751 752 0.178912 ATAAGCTACCCCCTACCCGG 60.179 60.000 0.00 0.00 0.00 5.73
752 753 2.952434 TAAGCTACCCCCTACCCGGC 62.952 65.000 0.00 0.00 0.00 6.13
753 754 4.874533 GCTACCCCCTACCCGGCT 62.875 72.222 0.00 0.00 0.00 5.52
754 755 2.041197 CTACCCCCTACCCGGCTT 60.041 66.667 0.00 0.00 0.00 4.35
755 756 1.233949 CTACCCCCTACCCGGCTTA 59.766 63.158 0.00 0.00 0.00 3.09
756 757 0.178912 CTACCCCCTACCCGGCTTAT 60.179 60.000 0.00 0.00 0.00 1.73
757 758 0.268566 TACCCCCTACCCGGCTTATT 59.731 55.000 0.00 0.00 0.00 1.40
758 759 1.058428 ACCCCCTACCCGGCTTATTC 61.058 60.000 0.00 0.00 0.00 1.75
759 760 0.767060 CCCCCTACCCGGCTTATTCT 60.767 60.000 0.00 0.00 0.00 2.40
760 761 1.483686 CCCCCTACCCGGCTTATTCTA 60.484 57.143 0.00 0.00 0.00 2.10
761 762 1.900486 CCCCTACCCGGCTTATTCTAG 59.100 57.143 0.00 0.00 0.00 2.43
762 763 2.492196 CCCCTACCCGGCTTATTCTAGA 60.492 54.545 0.00 0.00 0.00 2.43
763 764 3.236896 CCCTACCCGGCTTATTCTAGAA 58.763 50.000 7.82 7.82 0.00 2.10
764 765 3.258622 CCCTACCCGGCTTATTCTAGAAG 59.741 52.174 11.53 0.00 0.00 2.85
775 776 7.809546 GCTTATTCTAGAAGCCCAACTAATT 57.190 36.000 11.53 0.00 42.90 1.40
776 777 8.226819 GCTTATTCTAGAAGCCCAACTAATTT 57.773 34.615 11.53 0.00 42.90 1.82
777 778 8.687242 GCTTATTCTAGAAGCCCAACTAATTTT 58.313 33.333 11.53 0.00 42.90 1.82
805 806 7.778185 TTTTAGAAGCCTACTAGTCAAGTCT 57.222 36.000 0.00 0.00 39.80 3.24
806 807 7.778185 TTTAGAAGCCTACTAGTCAAGTCTT 57.222 36.000 0.00 0.00 39.80 3.01
807 808 8.874744 TTTAGAAGCCTACTAGTCAAGTCTTA 57.125 34.615 0.00 0.00 39.80 2.10
808 809 8.874744 TTAGAAGCCTACTAGTCAAGTCTTAA 57.125 34.615 0.00 0.00 39.80 1.85
809 810 7.160547 AGAAGCCTACTAGTCAAGTCTTAAC 57.839 40.000 0.00 0.00 39.80 2.01
810 811 6.949463 AGAAGCCTACTAGTCAAGTCTTAACT 59.051 38.462 0.00 0.00 39.80 2.24
811 812 8.108364 AGAAGCCTACTAGTCAAGTCTTAACTA 58.892 37.037 0.00 0.00 39.80 2.24
812 813 7.628769 AGCCTACTAGTCAAGTCTTAACTAC 57.371 40.000 0.00 0.00 39.80 2.73
813 814 7.404481 AGCCTACTAGTCAAGTCTTAACTACT 58.596 38.462 0.00 0.00 39.80 2.57
814 815 8.547173 AGCCTACTAGTCAAGTCTTAACTACTA 58.453 37.037 0.00 0.00 39.80 1.82
815 816 8.829612 GCCTACTAGTCAAGTCTTAACTACTAG 58.170 40.741 0.00 15.35 43.88 2.57
816 817 9.328845 CCTACTAGTCAAGTCTTAACTACTAGG 57.671 40.741 18.40 15.19 43.22 3.02
817 818 7.628769 ACTAGTCAAGTCTTAACTACTAGGC 57.371 40.000 18.40 0.00 43.22 3.93
818 819 7.404481 ACTAGTCAAGTCTTAACTACTAGGCT 58.596 38.462 18.40 0.00 43.22 4.58
819 820 7.889600 ACTAGTCAAGTCTTAACTACTAGGCTT 59.110 37.037 18.40 0.00 43.22 4.35
820 821 7.160547 AGTCAAGTCTTAACTACTAGGCTTC 57.839 40.000 0.00 0.00 34.27 3.86
821 822 6.949463 AGTCAAGTCTTAACTACTAGGCTTCT 59.051 38.462 0.00 0.00 34.27 2.85
822 823 8.108364 AGTCAAGTCTTAACTACTAGGCTTCTA 58.892 37.037 0.00 0.00 34.27 2.10
823 824 8.738106 GTCAAGTCTTAACTACTAGGCTTCTAA 58.262 37.037 0.00 0.00 34.27 2.10
824 825 9.305555 TCAAGTCTTAACTACTAGGCTTCTAAA 57.694 33.333 0.00 0.00 34.27 1.85
825 826 9.924650 CAAGTCTTAACTACTAGGCTTCTAAAA 57.075 33.333 0.00 0.00 34.27 1.52
856 857 8.521170 AATTTGGTTAGGGTTCTAGAATAAGC 57.479 34.615 8.75 12.79 0.00 3.09
857 858 6.886178 TTGGTTAGGGTTCTAGAATAAGCT 57.114 37.500 19.55 0.00 0.00 3.74
858 859 7.983166 TTGGTTAGGGTTCTAGAATAAGCTA 57.017 36.000 19.55 13.37 0.00 3.32
859 860 7.598759 TGGTTAGGGTTCTAGAATAAGCTAG 57.401 40.000 19.55 0.00 39.35 3.42
860 861 6.553852 TGGTTAGGGTTCTAGAATAAGCTAGG 59.446 42.308 19.55 0.00 38.68 3.02
861 862 6.554228 GGTTAGGGTTCTAGAATAAGCTAGGT 59.446 42.308 8.75 0.00 38.68 3.08
862 863 7.727634 GGTTAGGGTTCTAGAATAAGCTAGGTA 59.272 40.741 8.75 0.00 38.68 3.08
863 864 8.795513 GTTAGGGTTCTAGAATAAGCTAGGTAG 58.204 40.741 8.75 0.00 38.68 3.18
864 865 6.316513 AGGGTTCTAGAATAAGCTAGGTAGG 58.683 44.000 8.75 0.00 38.68 3.18
865 866 5.481122 GGGTTCTAGAATAAGCTAGGTAGGG 59.519 48.000 8.75 0.00 38.68 3.53
866 867 5.481122 GGTTCTAGAATAAGCTAGGTAGGGG 59.519 48.000 8.75 0.00 38.68 4.79
867 868 4.675038 TCTAGAATAAGCTAGGTAGGGGC 58.325 47.826 0.00 0.00 38.68 5.80
868 869 3.346146 AGAATAAGCTAGGTAGGGGCA 57.654 47.619 0.00 0.00 0.00 5.36
869 870 3.243724 AGAATAAGCTAGGTAGGGGCAG 58.756 50.000 0.00 0.00 0.00 4.85
870 871 1.353091 ATAAGCTAGGTAGGGGCAGC 58.647 55.000 0.00 0.00 0.00 5.25
871 872 0.264955 TAAGCTAGGTAGGGGCAGCT 59.735 55.000 0.00 0.00 46.05 4.24
872 873 0.621862 AAGCTAGGTAGGGGCAGCTT 60.622 55.000 0.00 1.97 46.69 3.74
873 874 0.264955 AGCTAGGTAGGGGCAGCTTA 59.735 55.000 0.00 0.00 41.50 3.09
874 875 1.132689 AGCTAGGTAGGGGCAGCTTAT 60.133 52.381 0.00 0.00 41.50 1.73
875 876 1.700186 GCTAGGTAGGGGCAGCTTATT 59.300 52.381 0.00 0.00 0.00 1.40
876 877 2.551071 GCTAGGTAGGGGCAGCTTATTG 60.551 54.545 0.00 0.00 0.00 1.90
877 878 0.183731 AGGTAGGGGCAGCTTATTGC 59.816 55.000 0.00 0.00 43.34 3.56
878 879 0.106719 GGTAGGGGCAGCTTATTGCA 60.107 55.000 0.00 0.00 45.86 4.08
879 880 1.312815 GTAGGGGCAGCTTATTGCAG 58.687 55.000 0.00 0.00 45.86 4.41
903 904 7.559590 GCTTATTCTAGAAGCCATCAAAAGA 57.440 36.000 11.53 0.00 42.90 2.52
904 905 7.989826 GCTTATTCTAGAAGCCATCAAAAGAA 58.010 34.615 11.53 0.00 42.90 2.52
905 906 7.912773 GCTTATTCTAGAAGCCATCAAAAGAAC 59.087 37.037 11.53 0.00 42.90 3.01
906 907 9.171877 CTTATTCTAGAAGCCATCAAAAGAACT 57.828 33.333 11.53 0.00 30.94 3.01
907 908 6.808008 TTCTAGAAGCCATCAAAAGAACTG 57.192 37.500 0.00 0.00 0.00 3.16
908 909 5.248640 TCTAGAAGCCATCAAAAGAACTGG 58.751 41.667 0.00 0.00 0.00 4.00
910 911 3.820595 GCCATCAAAAGAACTGGCC 57.179 52.632 0.00 0.00 46.76 5.36
911 912 0.247460 GCCATCAAAAGAACTGGCCC 59.753 55.000 0.00 0.00 46.76 5.80
912 913 1.928868 CCATCAAAAGAACTGGCCCT 58.071 50.000 0.00 0.00 0.00 5.19
913 914 2.883888 GCCATCAAAAGAACTGGCCCTA 60.884 50.000 0.00 0.00 46.76 3.53
914 915 3.430453 CCATCAAAAGAACTGGCCCTAA 58.570 45.455 0.00 0.00 0.00 2.69
915 916 3.193479 CCATCAAAAGAACTGGCCCTAAC 59.807 47.826 0.00 0.00 0.00 2.34
916 917 3.876309 TCAAAAGAACTGGCCCTAACT 57.124 42.857 0.00 0.00 0.00 2.24
917 918 3.751518 TCAAAAGAACTGGCCCTAACTC 58.248 45.455 0.00 0.00 0.00 3.01
918 919 2.474410 AAAGAACTGGCCCTAACTCG 57.526 50.000 0.00 0.00 0.00 4.18
919 920 0.036294 AAGAACTGGCCCTAACTCGC 60.036 55.000 0.00 0.00 0.00 5.03
920 921 0.905337 AGAACTGGCCCTAACTCGCT 60.905 55.000 0.00 0.00 0.00 4.93
921 922 0.822164 GAACTGGCCCTAACTCGCTA 59.178 55.000 0.00 0.00 0.00 4.26
922 923 0.824759 AACTGGCCCTAACTCGCTAG 59.175 55.000 0.00 0.00 39.31 3.42
923 924 0.324460 ACTGGCCCTAACTCGCTAGT 60.324 55.000 0.00 0.00 41.41 2.57
924 925 0.103208 CTGGCCCTAACTCGCTAGTG 59.897 60.000 0.00 0.00 35.62 2.74
925 926 1.327690 TGGCCCTAACTCGCTAGTGG 61.328 60.000 0.00 0.00 35.62 4.00
926 927 1.442148 GCCCTAACTCGCTAGTGGG 59.558 63.158 8.94 8.94 40.46 4.61
927 928 1.442148 CCCTAACTCGCTAGTGGGC 59.558 63.158 2.16 0.00 33.44 5.36
943 944 3.129792 GGCGACCTATGCTCATAGC 57.870 57.895 10.59 0.00 42.82 2.97
944 945 0.605589 GGCGACCTATGCTCATAGCT 59.394 55.000 10.59 0.00 42.97 3.32
957 958 4.022935 TGCTCATAGCTTTTGTCTGTTTGG 60.023 41.667 0.00 0.00 42.97 3.28
967 968 6.038714 GCTTTTGTCTGTTTGGCTAGCTATAT 59.961 38.462 15.72 0.00 0.00 0.86
968 969 7.226720 GCTTTTGTCTGTTTGGCTAGCTATATA 59.773 37.037 15.72 0.94 0.00 0.86
977 978 7.393515 TGTTTGGCTAGCTATATAATCTCTCGA 59.606 37.037 15.72 0.00 0.00 4.04
978 979 7.561021 TTGGCTAGCTATATAATCTCTCGAG 57.439 40.000 15.72 5.93 0.00 4.04
981 982 6.990349 GGCTAGCTATATAATCTCTCGAGTCT 59.010 42.308 15.72 0.00 0.00 3.24
982 983 7.042051 GGCTAGCTATATAATCTCTCGAGTCTG 60.042 44.444 15.72 4.50 0.00 3.51
986 987 9.727859 AGCTATATAATCTCTCGAGTCTGTTAA 57.272 33.333 13.13 0.00 0.00 2.01
1011 1016 2.614829 ATTGGATCCGAAACCGGTAG 57.385 50.000 8.00 1.98 46.77 3.18
1041 1047 0.903454 CCGACCACAACTCCCCTACT 60.903 60.000 0.00 0.00 0.00 2.57
1587 1913 4.759782 TCGATCCCAGAAATCTCAAACTC 58.240 43.478 0.00 0.00 0.00 3.01
1630 1956 4.273235 ACCTGTTTAAAAGAACCCGTTACG 59.727 41.667 0.00 0.00 0.00 3.18
1641 1967 4.393990 AGAACCCGTTACGAAATCAAATCC 59.606 41.667 6.24 0.00 0.00 3.01
1675 2008 9.947669 CTTGATTTGTGATTTAATCAGATCTCC 57.052 33.333 8.00 0.00 40.65 3.71
1972 2313 3.236816 CAGCGAATTCAACAATGTGTCC 58.763 45.455 6.22 0.00 0.00 4.02
2030 2371 1.797933 CGTGTCACGCCTCTCGAAG 60.798 63.158 13.22 0.00 41.67 3.79
2336 2723 6.877322 TCCCTCTTTTGTTCTTTATCGGTTAG 59.123 38.462 0.00 0.00 0.00 2.34
2402 2789 6.849085 TTTGGCATGTAGGTTGTTCAATAT 57.151 33.333 0.00 0.00 0.00 1.28
2453 2840 0.618458 TGCTCCATACAGACCAACCC 59.382 55.000 0.00 0.00 0.00 4.11
2723 3118 9.817809 TTGCCAAACATTTATTAAAGTGTGTAA 57.182 25.926 0.00 0.00 0.00 2.41
3018 3425 8.953368 AATCTGCAAAGATTTAATGATTTCCC 57.047 30.769 0.00 0.00 35.18 3.97
3024 3431 7.492344 GCAAAGATTTAATGATTTCCCGAACAT 59.508 33.333 0.00 0.00 0.00 2.71
3297 3707 2.809174 CGTCTTCATGCCACGCGA 60.809 61.111 15.93 0.00 0.00 5.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.617523 AAAATGTGTGTATGATGACTCATATGA 57.382 29.630 5.07 5.07 44.20 2.15
56 57 6.927294 AGACTTTAGCAATACTTATGGCAC 57.073 37.500 0.00 0.00 35.03 5.01
57 58 6.884295 ACAAGACTTTAGCAATACTTATGGCA 59.116 34.615 0.00 0.00 35.03 4.92
58 59 7.148239 ACACAAGACTTTAGCAATACTTATGGC 60.148 37.037 0.00 0.00 32.69 4.40
59 60 8.268850 ACACAAGACTTTAGCAATACTTATGG 57.731 34.615 0.00 0.00 0.00 2.74
60 61 8.935844 TGACACAAGACTTTAGCAATACTTATG 58.064 33.333 0.00 0.00 0.00 1.90
61 62 9.672673 ATGACACAAGACTTTAGCAATACTTAT 57.327 29.630 0.00 0.00 0.00 1.73
63 64 7.986085 ATGACACAAGACTTTAGCAATACTT 57.014 32.000 0.00 0.00 0.00 2.24
64 65 9.502091 TTTATGACACAAGACTTTAGCAATACT 57.498 29.630 0.00 0.00 0.00 2.12
67 68 9.236006 AGATTTATGACACAAGACTTTAGCAAT 57.764 29.630 0.00 0.00 0.00 3.56
68 69 8.621532 AGATTTATGACACAAGACTTTAGCAA 57.378 30.769 0.00 0.00 0.00 3.91
69 70 8.621532 AAGATTTATGACACAAGACTTTAGCA 57.378 30.769 0.00 0.00 0.00 3.49
70 71 9.974750 GTAAGATTTATGACACAAGACTTTAGC 57.025 33.333 0.00 0.00 0.00 3.09
72 73 9.701098 ACGTAAGATTTATGACACAAGACTTTA 57.299 29.630 0.00 0.00 43.62 1.85
73 74 8.495949 CACGTAAGATTTATGACACAAGACTTT 58.504 33.333 0.00 0.00 43.62 2.66
74 75 7.117812 CCACGTAAGATTTATGACACAAGACTT 59.882 37.037 0.00 0.00 43.62 3.01
75 76 6.590292 CCACGTAAGATTTATGACACAAGACT 59.410 38.462 0.00 0.00 43.62 3.24
76 77 6.588756 TCCACGTAAGATTTATGACACAAGAC 59.411 38.462 0.00 0.00 43.62 3.01
77 78 6.693466 TCCACGTAAGATTTATGACACAAGA 58.307 36.000 0.00 0.00 43.62 3.02
78 79 6.961359 TCCACGTAAGATTTATGACACAAG 57.039 37.500 0.00 0.00 43.62 3.16
79 80 7.731882 TTTCCACGTAAGATTTATGACACAA 57.268 32.000 0.00 0.00 43.62 3.33
80 81 7.915293 ATTTCCACGTAAGATTTATGACACA 57.085 32.000 0.00 0.00 43.62 3.72
81 82 8.447833 TGAATTTCCACGTAAGATTTATGACAC 58.552 33.333 0.00 0.00 43.62 3.67
82 83 8.554835 TGAATTTCCACGTAAGATTTATGACA 57.445 30.769 0.00 0.00 43.62 3.58
83 84 9.438291 CATGAATTTCCACGTAAGATTTATGAC 57.562 33.333 10.18 0.00 43.62 3.06
84 85 9.173021 ACATGAATTTCCACGTAAGATTTATGA 57.827 29.630 17.28 0.00 43.62 2.15
85 86 9.225201 CACATGAATTTCCACGTAAGATTTATG 57.775 33.333 0.00 12.47 43.62 1.90
86 87 9.173021 TCACATGAATTTCCACGTAAGATTTAT 57.827 29.630 0.00 0.00 43.62 1.40
87 88 8.554835 TCACATGAATTTCCACGTAAGATTTA 57.445 30.769 0.00 0.00 43.62 1.40
88 89 7.447374 TCACATGAATTTCCACGTAAGATTT 57.553 32.000 0.00 0.00 43.62 2.17
89 90 7.447374 TTCACATGAATTTCCACGTAAGATT 57.553 32.000 0.00 0.00 43.62 2.40
90 91 7.630242 ATTCACATGAATTTCCACGTAAGAT 57.370 32.000 0.00 0.00 41.64 2.40
91 92 8.554835 TTATTCACATGAATTTCCACGTAAGA 57.445 30.769 12.16 0.00 41.64 2.10
92 93 9.787532 AATTATTCACATGAATTTCCACGTAAG 57.212 29.630 12.16 0.00 41.64 2.34
95 96 9.487790 AAAAATTATTCACATGAATTTCCACGT 57.512 25.926 12.16 0.00 41.64 4.49
121 122 9.775854 TCAATCAAGCATAAAATGAAAAGGAAA 57.224 25.926 0.00 0.00 0.00 3.13
122 123 9.426837 CTCAATCAAGCATAAAATGAAAAGGAA 57.573 29.630 0.00 0.00 0.00 3.36
123 124 8.587608 ACTCAATCAAGCATAAAATGAAAAGGA 58.412 29.630 0.00 0.00 0.00 3.36
124 125 8.767478 ACTCAATCAAGCATAAAATGAAAAGG 57.233 30.769 0.00 0.00 0.00 3.11
125 126 9.414295 TGACTCAATCAAGCATAAAATGAAAAG 57.586 29.630 0.00 0.00 33.02 2.27
126 127 9.195411 GTGACTCAATCAAGCATAAAATGAAAA 57.805 29.630 0.00 0.00 39.72 2.29
127 128 8.579006 AGTGACTCAATCAAGCATAAAATGAAA 58.421 29.630 0.00 0.00 39.72 2.69
128 129 8.114331 AGTGACTCAATCAAGCATAAAATGAA 57.886 30.769 0.00 0.00 39.72 2.57
129 130 7.692460 AGTGACTCAATCAAGCATAAAATGA 57.308 32.000 0.00 0.00 39.72 2.57
130 131 9.499585 CTAAGTGACTCAATCAAGCATAAAATG 57.500 33.333 0.00 0.00 39.72 2.32
131 132 9.453572 TCTAAGTGACTCAATCAAGCATAAAAT 57.546 29.630 0.00 0.00 39.72 1.82
132 133 8.846943 TCTAAGTGACTCAATCAAGCATAAAA 57.153 30.769 0.00 0.00 39.72 1.52
133 134 8.886719 CATCTAAGTGACTCAATCAAGCATAAA 58.113 33.333 0.00 0.00 39.72 1.40
134 135 8.043113 ACATCTAAGTGACTCAATCAAGCATAA 58.957 33.333 0.00 0.00 39.72 1.90
135 136 7.493645 CACATCTAAGTGACTCAATCAAGCATA 59.506 37.037 0.00 0.00 42.05 3.14
136 137 6.315642 CACATCTAAGTGACTCAATCAAGCAT 59.684 38.462 0.00 0.00 42.05 3.79
137 138 5.640783 CACATCTAAGTGACTCAATCAAGCA 59.359 40.000 0.00 0.00 42.05 3.91
138 139 5.447010 GCACATCTAAGTGACTCAATCAAGC 60.447 44.000 0.00 0.00 42.05 4.01
139 140 5.640783 TGCACATCTAAGTGACTCAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
140 141 5.550290 TGCACATCTAAGTGACTCAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
141 142 5.151297 TGCACATCTAAGTGACTCAATCA 57.849 39.130 0.00 0.00 42.05 2.57
142 143 6.674694 ATTGCACATCTAAGTGACTCAATC 57.325 37.500 0.00 0.00 42.05 2.67
143 144 7.607607 TGTTATTGCACATCTAAGTGACTCAAT 59.392 33.333 0.00 0.00 42.05 2.57
144 145 6.934083 TGTTATTGCACATCTAAGTGACTCAA 59.066 34.615 0.00 0.00 42.05 3.02
145 146 6.463360 TGTTATTGCACATCTAAGTGACTCA 58.537 36.000 0.00 0.00 42.05 3.41
146 147 6.968131 TGTTATTGCACATCTAAGTGACTC 57.032 37.500 0.00 0.00 42.05 3.36
147 148 7.161404 TCTTGTTATTGCACATCTAAGTGACT 58.839 34.615 0.00 0.00 42.05 3.41
148 149 7.364522 TCTTGTTATTGCACATCTAAGTGAC 57.635 36.000 0.00 0.00 42.05 3.67
149 150 9.836864 ATATCTTGTTATTGCACATCTAAGTGA 57.163 29.630 0.00 0.00 42.05 3.41
150 151 9.874215 CATATCTTGTTATTGCACATCTAAGTG 57.126 33.333 0.00 0.00 42.37 3.16
151 152 9.618890 ACATATCTTGTTATTGCACATCTAAGT 57.381 29.630 0.00 0.00 33.74 2.24
153 154 9.836864 AGACATATCTTGTTATTGCACATCTAA 57.163 29.630 0.00 0.00 39.18 2.10
154 155 9.836864 AAGACATATCTTGTTATTGCACATCTA 57.163 29.630 0.00 0.00 43.86 1.98
155 156 8.743085 AAGACATATCTTGTTATTGCACATCT 57.257 30.769 0.00 0.00 43.86 2.90
157 158 9.060347 CCTAAGACATATCTTGTTATTGCACAT 57.940 33.333 0.00 0.00 45.17 3.21
158 159 7.012327 GCCTAAGACATATCTTGTTATTGCACA 59.988 37.037 0.00 0.00 45.17 4.57
159 160 7.012327 TGCCTAAGACATATCTTGTTATTGCAC 59.988 37.037 0.00 0.00 45.17 4.57
160 161 7.012327 GTGCCTAAGACATATCTTGTTATTGCA 59.988 37.037 0.00 0.00 45.17 4.08
161 162 7.012327 TGTGCCTAAGACATATCTTGTTATTGC 59.988 37.037 0.00 0.00 45.17 3.56
162 163 8.338259 GTGTGCCTAAGACATATCTTGTTATTG 58.662 37.037 0.00 0.00 45.17 1.90
163 164 8.267894 AGTGTGCCTAAGACATATCTTGTTATT 58.732 33.333 0.00 0.00 45.17 1.40
164 165 7.796054 AGTGTGCCTAAGACATATCTTGTTAT 58.204 34.615 0.00 0.00 45.17 1.89
165 166 7.182817 AGTGTGCCTAAGACATATCTTGTTA 57.817 36.000 0.00 0.00 45.17 2.41
166 167 6.054860 AGTGTGCCTAAGACATATCTTGTT 57.945 37.500 0.00 0.00 45.17 2.83
167 168 5.683876 AGTGTGCCTAAGACATATCTTGT 57.316 39.130 0.00 0.00 45.17 3.16
168 169 6.992063 AAAGTGTGCCTAAGACATATCTTG 57.008 37.500 0.00 0.00 45.17 3.02
169 170 7.448469 ACAAAAAGTGTGCCTAAGACATATCTT 59.552 33.333 0.00 0.00 42.95 2.40
170 171 6.942576 ACAAAAAGTGTGCCTAAGACATATCT 59.057 34.615 0.00 0.00 39.72 1.98
171 172 7.145932 ACAAAAAGTGTGCCTAAGACATATC 57.854 36.000 0.00 0.00 39.72 1.63
172 173 8.630054 TTACAAAAAGTGTGCCTAAGACATAT 57.370 30.769 0.00 0.00 41.89 1.78
173 174 8.511321 CATTACAAAAAGTGTGCCTAAGACATA 58.489 33.333 0.00 0.00 41.89 2.29
174 175 6.952773 TTACAAAAAGTGTGCCTAAGACAT 57.047 33.333 0.00 0.00 41.89 3.06
175 176 6.734137 CATTACAAAAAGTGTGCCTAAGACA 58.266 36.000 0.00 0.00 41.89 3.41
176 177 5.629435 GCATTACAAAAAGTGTGCCTAAGAC 59.371 40.000 0.00 0.00 41.89 3.01
177 178 5.561919 CGCATTACAAAAAGTGTGCCTAAGA 60.562 40.000 0.00 0.00 41.89 2.10
178 179 4.616802 CGCATTACAAAAAGTGTGCCTAAG 59.383 41.667 0.00 0.00 41.89 2.18
179 180 4.036971 ACGCATTACAAAAAGTGTGCCTAA 59.963 37.500 0.00 0.00 41.89 2.69
180 181 3.566322 ACGCATTACAAAAAGTGTGCCTA 59.434 39.130 0.00 0.00 41.89 3.93
181 182 2.360801 ACGCATTACAAAAAGTGTGCCT 59.639 40.909 0.00 0.00 41.89 4.75
182 183 2.738135 ACGCATTACAAAAAGTGTGCC 58.262 42.857 0.00 0.00 41.89 5.01
183 184 3.911964 CCTACGCATTACAAAAAGTGTGC 59.088 43.478 0.00 0.00 41.89 4.57
184 185 3.911964 GCCTACGCATTACAAAAAGTGTG 59.088 43.478 0.00 0.00 36.51 3.82
185 186 3.566322 TGCCTACGCATTACAAAAAGTGT 59.434 39.130 0.00 0.00 41.12 3.55
186 187 4.153958 TGCCTACGCATTACAAAAAGTG 57.846 40.909 0.00 0.00 41.12 3.16
201 202 2.934553 GACAAAAGGATACCGTGCCTAC 59.065 50.000 0.00 0.00 33.20 3.18
202 203 2.417651 CGACAAAAGGATACCGTGCCTA 60.418 50.000 0.00 0.00 33.20 3.93
203 204 1.674817 CGACAAAAGGATACCGTGCCT 60.675 52.381 0.00 0.00 35.61 4.75
204 205 0.725117 CGACAAAAGGATACCGTGCC 59.275 55.000 0.00 0.00 37.17 5.01
205 206 1.435577 ACGACAAAAGGATACCGTGC 58.564 50.000 0.00 0.00 37.17 5.34
206 207 4.033587 CCAATACGACAAAAGGATACCGTG 59.966 45.833 0.00 0.00 37.17 4.94
207 208 4.186159 CCAATACGACAAAAGGATACCGT 58.814 43.478 0.00 0.00 37.17 4.83
208 209 3.001939 GCCAATACGACAAAAGGATACCG 59.998 47.826 0.00 0.00 37.17 4.02
209 210 4.196971 AGCCAATACGACAAAAGGATACC 58.803 43.478 0.00 0.00 37.17 2.73
210 211 5.050295 GCTAGCCAATACGACAAAAGGATAC 60.050 44.000 2.29 0.00 0.00 2.24
211 212 5.054477 GCTAGCCAATACGACAAAAGGATA 58.946 41.667 2.29 0.00 0.00 2.59
212 213 3.877508 GCTAGCCAATACGACAAAAGGAT 59.122 43.478 2.29 0.00 0.00 3.24
213 214 3.055385 AGCTAGCCAATACGACAAAAGGA 60.055 43.478 12.13 0.00 0.00 3.36
214 215 3.270877 AGCTAGCCAATACGACAAAAGG 58.729 45.455 12.13 0.00 0.00 3.11
215 216 7.709269 TTATAGCTAGCCAATACGACAAAAG 57.291 36.000 12.13 0.00 0.00 2.27
216 217 8.148351 AGATTATAGCTAGCCAATACGACAAAA 58.852 33.333 12.13 0.00 0.00 2.44
217 218 7.667557 AGATTATAGCTAGCCAATACGACAAA 58.332 34.615 12.13 0.00 0.00 2.83
218 219 7.176865 AGAGATTATAGCTAGCCAATACGACAA 59.823 37.037 12.13 0.00 0.00 3.18
219 220 6.659668 AGAGATTATAGCTAGCCAATACGACA 59.340 38.462 12.13 0.00 0.00 4.35
220 221 7.090953 AGAGATTATAGCTAGCCAATACGAC 57.909 40.000 12.13 4.47 0.00 4.34
221 222 6.037281 CGAGAGATTATAGCTAGCCAATACGA 59.963 42.308 12.13 0.00 0.00 3.43
222 223 6.195868 CGAGAGATTATAGCTAGCCAATACG 58.804 44.000 12.13 5.16 0.00 3.06
223 224 6.095720 ACCGAGAGATTATAGCTAGCCAATAC 59.904 42.308 12.13 6.91 0.00 1.89
224 225 6.188407 ACCGAGAGATTATAGCTAGCCAATA 58.812 40.000 12.13 7.20 0.00 1.90
225 226 5.020132 ACCGAGAGATTATAGCTAGCCAAT 58.980 41.667 12.13 8.78 0.00 3.16
226 227 4.408276 ACCGAGAGATTATAGCTAGCCAA 58.592 43.478 12.13 3.64 0.00 4.52
227 228 4.035612 ACCGAGAGATTATAGCTAGCCA 57.964 45.455 12.13 0.00 0.00 4.75
228 229 5.164954 CAAACCGAGAGATTATAGCTAGCC 58.835 45.833 12.13 0.00 0.00 3.93
229 230 5.774630 ACAAACCGAGAGATTATAGCTAGC 58.225 41.667 6.62 6.62 0.00 3.42
242 243 7.218614 TCCAATTAAGACTTAACAAACCGAGA 58.781 34.615 9.82 0.00 0.00 4.04
243 244 7.429636 TCCAATTAAGACTTAACAAACCGAG 57.570 36.000 9.82 0.00 0.00 4.63
244 245 7.574217 GCATCCAATTAAGACTTAACAAACCGA 60.574 37.037 9.82 1.73 0.00 4.69
245 246 6.526674 GCATCCAATTAAGACTTAACAAACCG 59.473 38.462 9.82 0.45 0.00 4.44
246 247 7.375053 TGCATCCAATTAAGACTTAACAAACC 58.625 34.615 9.82 0.00 0.00 3.27
247 248 8.810652 TTGCATCCAATTAAGACTTAACAAAC 57.189 30.769 9.82 0.00 0.00 2.93
248 249 8.087750 CCTTGCATCCAATTAAGACTTAACAAA 58.912 33.333 9.82 0.00 0.00 2.83
249 250 7.601856 CCTTGCATCCAATTAAGACTTAACAA 58.398 34.615 9.82 7.14 0.00 2.83
250 251 6.350110 GCCTTGCATCCAATTAAGACTTAACA 60.350 38.462 9.82 0.00 0.00 2.41
251 252 6.036470 GCCTTGCATCCAATTAAGACTTAAC 58.964 40.000 9.82 0.00 0.00 2.01
252 253 5.127031 GGCCTTGCATCCAATTAAGACTTAA 59.873 40.000 10.02 10.02 0.00 1.85
253 254 4.644685 GGCCTTGCATCCAATTAAGACTTA 59.355 41.667 0.00 0.00 0.00 2.24
254 255 3.448660 GGCCTTGCATCCAATTAAGACTT 59.551 43.478 0.00 0.00 0.00 3.01
255 256 3.026694 GGCCTTGCATCCAATTAAGACT 58.973 45.455 0.00 0.00 0.00 3.24
256 257 2.223572 CGGCCTTGCATCCAATTAAGAC 60.224 50.000 0.00 0.00 0.00 3.01
257 258 2.023673 CGGCCTTGCATCCAATTAAGA 58.976 47.619 0.00 0.00 0.00 2.10
258 259 1.067516 CCGGCCTTGCATCCAATTAAG 59.932 52.381 0.00 0.00 0.00 1.85
259 260 1.110442 CCGGCCTTGCATCCAATTAA 58.890 50.000 0.00 0.00 0.00 1.40
260 261 0.033601 ACCGGCCTTGCATCCAATTA 60.034 50.000 0.00 0.00 0.00 1.40
261 262 0.033601 TACCGGCCTTGCATCCAATT 60.034 50.000 0.00 0.00 0.00 2.32
262 263 0.185901 ATACCGGCCTTGCATCCAAT 59.814 50.000 0.00 0.00 0.00 3.16
263 264 0.840617 TATACCGGCCTTGCATCCAA 59.159 50.000 0.00 0.00 0.00 3.53
264 265 0.840617 TTATACCGGCCTTGCATCCA 59.159 50.000 0.00 0.00 0.00 3.41
265 266 1.975660 TTTATACCGGCCTTGCATCC 58.024 50.000 0.00 0.00 0.00 3.51
266 267 4.584327 ATTTTTATACCGGCCTTGCATC 57.416 40.909 0.00 0.00 0.00 3.91
267 268 4.442753 CCAATTTTTATACCGGCCTTGCAT 60.443 41.667 0.00 0.00 0.00 3.96
268 269 3.118956 CCAATTTTTATACCGGCCTTGCA 60.119 43.478 0.00 0.00 0.00 4.08
269 270 3.131400 TCCAATTTTTATACCGGCCTTGC 59.869 43.478 0.00 0.00 0.00 4.01
270 271 4.440940 GGTCCAATTTTTATACCGGCCTTG 60.441 45.833 0.00 0.00 0.00 3.61
271 272 3.702548 GGTCCAATTTTTATACCGGCCTT 59.297 43.478 0.00 0.00 0.00 4.35
272 273 3.053170 AGGTCCAATTTTTATACCGGCCT 60.053 43.478 0.00 0.00 35.32 5.19
273 274 3.293337 AGGTCCAATTTTTATACCGGCC 58.707 45.455 0.00 0.00 35.32 6.13
274 275 5.591472 AGTTAGGTCCAATTTTTATACCGGC 59.409 40.000 0.00 0.00 35.32 6.13
275 276 7.989170 ACTAGTTAGGTCCAATTTTTATACCGG 59.011 37.037 0.00 0.00 35.32 5.28
276 277 8.953368 ACTAGTTAGGTCCAATTTTTATACCG 57.047 34.615 0.00 0.00 35.32 4.02
282 283 8.201464 CCAAACAACTAGTTAGGTCCAATTTTT 58.799 33.333 8.04 0.00 40.26 1.94
283 284 7.201965 CCCAAACAACTAGTTAGGTCCAATTTT 60.202 37.037 8.04 0.00 40.26 1.82
284 285 6.266786 CCCAAACAACTAGTTAGGTCCAATTT 59.733 38.462 8.04 0.00 40.26 1.82
285 286 5.773176 CCCAAACAACTAGTTAGGTCCAATT 59.227 40.000 8.04 0.00 40.26 2.32
286 287 5.163023 ACCCAAACAACTAGTTAGGTCCAAT 60.163 40.000 8.04 0.00 40.93 3.16
287 288 4.166531 ACCCAAACAACTAGTTAGGTCCAA 59.833 41.667 8.04 0.00 40.93 3.53
288 289 3.717913 ACCCAAACAACTAGTTAGGTCCA 59.282 43.478 8.04 0.00 40.93 4.02
289 290 4.362470 ACCCAAACAACTAGTTAGGTCC 57.638 45.455 8.04 0.00 40.93 4.46
290 291 6.106648 ACTACCCAAACAACTAGTTAGGTC 57.893 41.667 8.04 0.00 42.73 3.85
291 292 6.295518 GCTACTACCCAAACAACTAGTTAGGT 60.296 42.308 8.04 12.10 44.64 3.08
292 293 6.104665 GCTACTACCCAAACAACTAGTTAGG 58.895 44.000 8.04 8.03 40.26 2.69
293 294 6.104665 GGCTACTACCCAAACAACTAGTTAG 58.895 44.000 8.04 5.71 40.26 2.34
294 295 5.336690 CGGCTACTACCCAAACAACTAGTTA 60.337 44.000 8.04 0.00 40.26 2.24
295 296 4.562143 CGGCTACTACCCAAACAACTAGTT 60.562 45.833 1.12 1.12 43.89 2.24
296 297 3.056322 CGGCTACTACCCAAACAACTAGT 60.056 47.826 0.00 0.00 0.00 2.57
297 298 3.518590 CGGCTACTACCCAAACAACTAG 58.481 50.000 0.00 0.00 0.00 2.57
298 299 2.234414 CCGGCTACTACCCAAACAACTA 59.766 50.000 0.00 0.00 0.00 2.24
299 300 1.002773 CCGGCTACTACCCAAACAACT 59.997 52.381 0.00 0.00 0.00 3.16
300 301 1.271001 ACCGGCTACTACCCAAACAAC 60.271 52.381 0.00 0.00 0.00 3.32
301 302 1.058284 ACCGGCTACTACCCAAACAA 58.942 50.000 0.00 0.00 0.00 2.83
302 303 1.935799 TACCGGCTACTACCCAAACA 58.064 50.000 0.00 0.00 0.00 2.83
303 304 4.670896 TTATACCGGCTACTACCCAAAC 57.329 45.455 0.00 0.00 0.00 2.93
304 305 5.690464 TTTTATACCGGCTACTACCCAAA 57.310 39.130 0.00 0.00 0.00 3.28
305 306 5.690464 TTTTTATACCGGCTACTACCCAA 57.310 39.130 0.00 0.00 0.00 4.12
344 345 8.913656 CATTGTTTTGAAAAAGTGCACATTTTT 58.086 25.926 27.71 26.71 41.32 1.94
345 346 8.081025 ACATTGTTTTGAAAAAGTGCACATTTT 58.919 25.926 27.48 27.48 30.57 1.82
346 347 7.592051 ACATTGTTTTGAAAAAGTGCACATTT 58.408 26.923 21.04 17.27 0.00 2.32
347 348 7.143514 ACATTGTTTTGAAAAAGTGCACATT 57.856 28.000 21.04 11.14 0.00 2.71
348 349 6.740411 ACATTGTTTTGAAAAAGTGCACAT 57.260 29.167 21.04 3.48 0.00 3.21
349 350 6.203530 TGAACATTGTTTTGAAAAAGTGCACA 59.796 30.769 21.04 0.00 0.00 4.57
350 351 6.597614 TGAACATTGTTTTGAAAAAGTGCAC 58.402 32.000 9.40 9.40 0.00 4.57
351 352 6.791887 TGAACATTGTTTTGAAAAAGTGCA 57.208 29.167 3.08 0.00 0.00 4.57
352 353 7.462731 TCATGAACATTGTTTTGAAAAAGTGC 58.537 30.769 3.08 0.00 0.00 4.40
353 354 9.991388 ATTCATGAACATTGTTTTGAAAAAGTG 57.009 25.926 22.11 0.00 0.00 3.16
385 386 8.782144 ACATTTTTCATATTGCCGAACATTTTT 58.218 25.926 0.00 0.00 0.00 1.94
386 387 8.321650 ACATTTTTCATATTGCCGAACATTTT 57.678 26.923 0.00 0.00 0.00 1.82
387 388 7.903995 ACATTTTTCATATTGCCGAACATTT 57.096 28.000 0.00 0.00 0.00 2.32
388 389 7.601886 TGAACATTTTTCATATTGCCGAACATT 59.398 29.630 0.00 0.00 0.00 2.71
389 390 7.095910 TGAACATTTTTCATATTGCCGAACAT 58.904 30.769 0.00 0.00 0.00 2.71
390 391 6.450545 TGAACATTTTTCATATTGCCGAACA 58.549 32.000 0.00 0.00 0.00 3.18
391 392 6.942886 TGAACATTTTTCATATTGCCGAAC 57.057 33.333 0.00 0.00 0.00 3.95
392 393 9.814899 ATTATGAACATTTTTCATATTGCCGAA 57.185 25.926 6.18 0.00 40.04 4.30
393 394 9.814899 AATTATGAACATTTTTCATATTGCCGA 57.185 25.926 6.18 0.00 40.04 5.54
440 441 9.862585 GTATCAAATTTGCGAACAATTTTTCTT 57.137 25.926 13.54 0.00 37.29 2.52
441 442 8.213812 CGTATCAAATTTGCGAACAATTTTTCT 58.786 29.630 13.54 0.00 37.29 2.52
442 443 8.001549 ACGTATCAAATTTGCGAACAATTTTTC 58.998 29.630 19.20 0.00 37.29 2.29
443 444 7.791590 CACGTATCAAATTTGCGAACAATTTTT 59.208 29.630 19.20 0.00 37.29 1.94
444 445 7.280055 CACGTATCAAATTTGCGAACAATTTT 58.720 30.769 19.20 0.00 38.98 1.82
445 446 6.128956 CCACGTATCAAATTTGCGAACAATTT 60.129 34.615 19.20 0.00 35.21 1.82
446 447 5.344665 CCACGTATCAAATTTGCGAACAATT 59.655 36.000 19.20 0.00 35.21 2.32
447 448 4.856487 CCACGTATCAAATTTGCGAACAAT 59.144 37.500 19.20 7.99 35.21 2.71
448 449 4.222886 CCACGTATCAAATTTGCGAACAA 58.777 39.130 19.20 1.26 0.00 2.83
449 450 3.816091 CCACGTATCAAATTTGCGAACA 58.184 40.909 19.20 1.92 0.00 3.18
450 451 2.592459 GCCACGTATCAAATTTGCGAAC 59.408 45.455 19.20 12.97 0.00 3.95
451 452 2.414824 GGCCACGTATCAAATTTGCGAA 60.415 45.455 19.20 2.60 0.00 4.70
452 453 1.131504 GGCCACGTATCAAATTTGCGA 59.868 47.619 19.20 5.87 0.00 5.10
453 454 1.544686 GGCCACGTATCAAATTTGCG 58.455 50.000 13.54 13.26 0.00 4.85
454 455 1.131504 TCGGCCACGTATCAAATTTGC 59.868 47.619 13.54 0.00 41.85 3.68
455 456 3.479505 TTCGGCCACGTATCAAATTTG 57.520 42.857 12.15 12.15 41.85 2.32
456 457 6.385649 AATATTCGGCCACGTATCAAATTT 57.614 33.333 2.24 0.00 41.85 1.82
457 458 6.385649 AAATATTCGGCCACGTATCAAATT 57.614 33.333 2.24 0.00 41.85 1.82
458 459 6.385649 AAAATATTCGGCCACGTATCAAAT 57.614 33.333 2.24 0.00 41.85 2.32
459 460 5.821516 AAAATATTCGGCCACGTATCAAA 57.178 34.783 2.24 0.00 41.85 2.69
460 461 5.821516 AAAAATATTCGGCCACGTATCAA 57.178 34.783 2.24 0.00 41.85 2.57
461 462 6.282167 TCTAAAAATATTCGGCCACGTATCA 58.718 36.000 2.24 0.00 41.85 2.15
462 463 6.774354 TCTAAAAATATTCGGCCACGTATC 57.226 37.500 2.24 0.00 41.85 2.24
463 464 7.556733 TTTCTAAAAATATTCGGCCACGTAT 57.443 32.000 2.24 0.00 41.85 3.06
464 465 6.981762 TTTCTAAAAATATTCGGCCACGTA 57.018 33.333 2.24 0.00 41.85 3.57
465 466 5.883503 TTTCTAAAAATATTCGGCCACGT 57.116 34.783 2.24 0.00 41.85 4.49
466 467 6.750039 ACATTTTCTAAAAATATTCGGCCACG 59.250 34.615 2.24 0.00 42.74 4.94
467 468 7.757624 TCACATTTTCTAAAAATATTCGGCCAC 59.242 33.333 2.24 0.00 0.00 5.01
468 469 7.831753 TCACATTTTCTAAAAATATTCGGCCA 58.168 30.769 2.24 0.00 0.00 5.36
469 470 8.696410 TTCACATTTTCTAAAAATATTCGGCC 57.304 30.769 0.00 0.00 0.00 6.13
483 484 9.559732 CTTTTTCCCCTTATTTTCACATTTTCT 57.440 29.630 0.00 0.00 0.00 2.52
484 485 9.554395 TCTTTTTCCCCTTATTTTCACATTTTC 57.446 29.630 0.00 0.00 0.00 2.29
485 486 9.913310 TTCTTTTTCCCCTTATTTTCACATTTT 57.087 25.926 0.00 0.00 0.00 1.82
486 487 9.913310 TTTCTTTTTCCCCTTATTTTCACATTT 57.087 25.926 0.00 0.00 0.00 2.32
487 488 9.913310 TTTTCTTTTTCCCCTTATTTTCACATT 57.087 25.926 0.00 0.00 0.00 2.71
488 489 9.913310 TTTTTCTTTTTCCCCTTATTTTCACAT 57.087 25.926 0.00 0.00 0.00 3.21
489 490 9.168451 GTTTTTCTTTTTCCCCTTATTTTCACA 57.832 29.630 0.00 0.00 0.00 3.58
490 491 9.168451 TGTTTTTCTTTTTCCCCTTATTTTCAC 57.832 29.630 0.00 0.00 0.00 3.18
491 492 9.389755 CTGTTTTTCTTTTTCCCCTTATTTTCA 57.610 29.630 0.00 0.00 0.00 2.69
492 493 9.607988 TCTGTTTTTCTTTTTCCCCTTATTTTC 57.392 29.630 0.00 0.00 0.00 2.29
493 494 9.967451 TTCTGTTTTTCTTTTTCCCCTTATTTT 57.033 25.926 0.00 0.00 0.00 1.82
494 495 9.391006 GTTCTGTTTTTCTTTTTCCCCTTATTT 57.609 29.630 0.00 0.00 0.00 1.40
495 496 8.544622 TGTTCTGTTTTTCTTTTTCCCCTTATT 58.455 29.630 0.00 0.00 0.00 1.40
496 497 8.084985 TGTTCTGTTTTTCTTTTTCCCCTTAT 57.915 30.769 0.00 0.00 0.00 1.73
497 498 7.483580 TGTTCTGTTTTTCTTTTTCCCCTTA 57.516 32.000 0.00 0.00 0.00 2.69
498 499 6.367374 TGTTCTGTTTTTCTTTTTCCCCTT 57.633 33.333 0.00 0.00 0.00 3.95
499 500 6.560003 ATGTTCTGTTTTTCTTTTTCCCCT 57.440 33.333 0.00 0.00 0.00 4.79
500 501 8.725405 TTAATGTTCTGTTTTTCTTTTTCCCC 57.275 30.769 0.00 0.00 0.00 4.81
602 603 7.138054 TCTAGAACCTTCTCAGAACCTTTTT 57.862 36.000 0.00 0.00 38.70 1.94
603 604 6.749036 TCTAGAACCTTCTCAGAACCTTTT 57.251 37.500 0.00 0.00 38.70 2.27
604 605 6.526526 GTTCTAGAACCTTCTCAGAACCTTT 58.473 40.000 22.74 0.00 39.18 3.11
605 606 6.104146 GTTCTAGAACCTTCTCAGAACCTT 57.896 41.667 22.74 0.00 39.18 3.50
606 607 5.731957 GTTCTAGAACCTTCTCAGAACCT 57.268 43.478 22.74 0.00 39.18 3.50
619 620 6.313164 CACCGATTTTAGGAAGGTTCTAGAAC 59.687 42.308 24.73 24.73 40.45 3.01
620 621 6.403878 CACCGATTTTAGGAAGGTTCTAGAA 58.596 40.000 0.00 0.00 32.04 2.10
621 622 5.105064 CCACCGATTTTAGGAAGGTTCTAGA 60.105 44.000 0.00 0.00 32.04 2.43
622 623 5.116882 CCACCGATTTTAGGAAGGTTCTAG 58.883 45.833 0.00 0.00 32.04 2.43
623 624 4.080751 CCCACCGATTTTAGGAAGGTTCTA 60.081 45.833 0.00 0.00 32.04 2.10
624 625 3.308188 CCCACCGATTTTAGGAAGGTTCT 60.308 47.826 0.00 0.00 32.04 3.01
625 626 3.014623 CCCACCGATTTTAGGAAGGTTC 58.985 50.000 0.00 0.00 32.04 3.62
626 627 2.291346 CCCCACCGATTTTAGGAAGGTT 60.291 50.000 0.00 0.00 32.04 3.50
627 628 1.283905 CCCCACCGATTTTAGGAAGGT 59.716 52.381 0.00 0.00 35.24 3.50
628 629 1.562475 TCCCCACCGATTTTAGGAAGG 59.438 52.381 0.00 0.00 0.00 3.46
629 630 2.421529 CCTCCCCACCGATTTTAGGAAG 60.422 54.545 0.00 0.00 0.00 3.46
630 631 1.562475 CCTCCCCACCGATTTTAGGAA 59.438 52.381 0.00 0.00 0.00 3.36
631 632 1.209621 CCTCCCCACCGATTTTAGGA 58.790 55.000 0.00 0.00 0.00 2.94
632 633 1.209621 TCCTCCCCACCGATTTTAGG 58.790 55.000 0.00 0.00 0.00 2.69
633 634 3.477530 GATTCCTCCCCACCGATTTTAG 58.522 50.000 0.00 0.00 0.00 1.85
634 635 2.173996 GGATTCCTCCCCACCGATTTTA 59.826 50.000 0.00 0.00 35.28 1.52
635 636 1.063942 GGATTCCTCCCCACCGATTTT 60.064 52.381 0.00 0.00 35.28 1.82
636 637 0.551396 GGATTCCTCCCCACCGATTT 59.449 55.000 0.00 0.00 35.28 2.17
637 638 0.327576 AGGATTCCTCCCCACCGATT 60.328 55.000 0.00 0.00 43.21 3.34
638 639 0.566176 TAGGATTCCTCCCCACCGAT 59.434 55.000 8.94 0.00 43.21 4.18
639 640 0.566176 ATAGGATTCCTCCCCACCGA 59.434 55.000 8.94 0.00 43.21 4.69
640 641 2.320681 TATAGGATTCCTCCCCACCG 57.679 55.000 8.94 0.00 43.21 4.94
641 642 2.846827 CCATATAGGATTCCTCCCCACC 59.153 54.545 8.94 0.00 43.21 4.61
642 643 2.846827 CCCATATAGGATTCCTCCCCAC 59.153 54.545 8.94 0.00 43.21 4.61
643 644 2.834844 GCCCATATAGGATTCCTCCCCA 60.835 54.545 8.94 0.00 43.21 4.96
644 645 1.847088 GCCCATATAGGATTCCTCCCC 59.153 57.143 8.94 0.00 43.21 4.81
645 646 1.486726 CGCCCATATAGGATTCCTCCC 59.513 57.143 8.94 0.00 43.21 4.30
646 647 1.486726 CCGCCCATATAGGATTCCTCC 59.513 57.143 8.94 0.00 41.22 4.30
647 648 1.486726 CCCGCCCATATAGGATTCCTC 59.513 57.143 8.94 0.00 41.22 3.71
648 649 1.584724 CCCGCCCATATAGGATTCCT 58.415 55.000 10.72 10.72 41.22 3.36
649 650 0.107165 GCCCGCCCATATAGGATTCC 60.107 60.000 0.00 0.00 41.22 3.01
650 651 0.107165 GGCCCGCCCATATAGGATTC 60.107 60.000 0.00 0.00 41.22 2.52
651 652 1.999346 GGCCCGCCCATATAGGATT 59.001 57.895 0.00 0.00 41.22 3.01
652 653 3.741325 GGCCCGCCCATATAGGAT 58.259 61.111 0.00 0.00 41.22 3.24
662 663 4.377708 CAGCTTTTTGGGCCCGCC 62.378 66.667 19.37 0.00 0.00 6.13
664 665 4.722855 CGCAGCTTTTTGGGCCCG 62.723 66.667 19.37 2.65 0.00 6.13
665 666 4.377708 CCGCAGCTTTTTGGGCCC 62.378 66.667 17.59 17.59 0.00 5.80
666 667 3.302344 TCCGCAGCTTTTTGGGCC 61.302 61.111 0.00 0.00 0.00 5.80
667 668 1.241315 TAGTCCGCAGCTTTTTGGGC 61.241 55.000 0.00 0.00 0.00 5.36
668 669 0.521735 GTAGTCCGCAGCTTTTTGGG 59.478 55.000 0.00 0.00 0.00 4.12
669 670 0.165944 CGTAGTCCGCAGCTTTTTGG 59.834 55.000 0.00 0.00 0.00 3.28
670 671 3.657537 CGTAGTCCGCAGCTTTTTG 57.342 52.632 0.00 0.00 0.00 2.44
680 681 2.025727 CCCTTAGCGCGTAGTCCG 59.974 66.667 8.43 0.00 40.40 4.79
681 682 2.279318 GCCCTTAGCGCGTAGTCC 60.279 66.667 8.43 0.00 0.00 3.85
682 683 2.279318 GGCCCTTAGCGCGTAGTC 60.279 66.667 8.43 0.00 45.17 2.59
683 684 3.072468 TGGCCCTTAGCGCGTAGT 61.072 61.111 8.43 0.00 45.17 2.73
684 685 2.279517 CTGGCCCTTAGCGCGTAG 60.280 66.667 8.43 2.90 45.17 3.51
685 686 2.175035 AAACTGGCCCTTAGCGCGTA 62.175 55.000 8.43 0.00 45.17 4.42
686 687 3.546714 AAACTGGCCCTTAGCGCGT 62.547 57.895 8.43 0.00 45.17 6.01
687 688 1.862602 AAAAACTGGCCCTTAGCGCG 61.863 55.000 0.00 0.00 45.17 6.86
688 689 1.964448 AAAAACTGGCCCTTAGCGC 59.036 52.632 0.00 0.00 45.17 5.92
716 717 4.535526 GCTTATTCTGGAAGCCCAAAAA 57.464 40.909 0.00 0.00 42.90 1.94
724 725 3.049344 AGGGGGTAGCTTATTCTGGAAG 58.951 50.000 0.00 0.00 0.00 3.46
725 726 3.145559 AGGGGGTAGCTTATTCTGGAA 57.854 47.619 0.00 0.00 0.00 3.53
726 727 2.889522 AGGGGGTAGCTTATTCTGGA 57.110 50.000 0.00 0.00 0.00 3.86
727 728 2.638363 GGTAGGGGGTAGCTTATTCTGG 59.362 54.545 0.00 0.00 0.00 3.86
728 729 2.638363 GGGTAGGGGGTAGCTTATTCTG 59.362 54.545 0.00 0.00 0.00 3.02
729 730 2.758986 CGGGTAGGGGGTAGCTTATTCT 60.759 54.545 0.00 0.00 0.00 2.40
730 731 1.622312 CGGGTAGGGGGTAGCTTATTC 59.378 57.143 0.00 0.00 0.00 1.75
731 732 1.725803 CGGGTAGGGGGTAGCTTATT 58.274 55.000 0.00 0.00 0.00 1.40
732 733 0.178912 CCGGGTAGGGGGTAGCTTAT 60.179 60.000 0.00 0.00 35.97 1.73
733 734 1.233949 CCGGGTAGGGGGTAGCTTA 59.766 63.158 0.00 0.00 35.97 3.09
734 735 2.041197 CCGGGTAGGGGGTAGCTT 60.041 66.667 0.00 0.00 35.97 3.74
735 736 4.874533 GCCGGGTAGGGGGTAGCT 62.875 72.222 2.18 0.00 41.48 3.32
736 737 2.952434 TAAGCCGGGTAGGGGGTAGC 62.952 65.000 6.57 0.00 41.48 3.58
737 738 0.178912 ATAAGCCGGGTAGGGGGTAG 60.179 60.000 6.57 0.00 41.48 3.18
738 739 0.268566 AATAAGCCGGGTAGGGGGTA 59.731 55.000 6.57 0.00 41.48 3.69
739 740 1.005156 AATAAGCCGGGTAGGGGGT 59.995 57.895 6.57 0.00 41.48 4.95
740 741 0.767060 AGAATAAGCCGGGTAGGGGG 60.767 60.000 6.57 0.00 41.48 5.40
741 742 1.900486 CTAGAATAAGCCGGGTAGGGG 59.100 57.143 6.57 0.00 41.48 4.79
742 743 2.885616 TCTAGAATAAGCCGGGTAGGG 58.114 52.381 6.57 0.00 41.48 3.53
743 744 3.306156 GCTTCTAGAATAAGCCGGGTAGG 60.306 52.174 6.57 0.00 42.85 3.18
744 745 3.915536 GCTTCTAGAATAAGCCGGGTAG 58.084 50.000 6.57 0.00 42.85 3.18
746 747 2.912690 GCTTCTAGAATAAGCCGGGT 57.087 50.000 5.44 0.00 42.85 5.28
751 752 7.809546 AATTAGTTGGGCTTCTAGAATAAGC 57.190 36.000 5.44 5.98 46.90 3.09
780 781 8.191534 AGACTTGACTAGTAGGCTTCTAAAAA 57.808 34.615 4.24 0.00 37.17 1.94
781 782 7.778185 AGACTTGACTAGTAGGCTTCTAAAA 57.222 36.000 4.24 0.00 37.17 1.52
782 783 7.778185 AAGACTTGACTAGTAGGCTTCTAAA 57.222 36.000 7.81 0.00 34.67 1.85
783 784 8.738106 GTTAAGACTTGACTAGTAGGCTTCTAA 58.262 37.037 15.67 5.03 38.98 2.10
784 785 8.108364 AGTTAAGACTTGACTAGTAGGCTTCTA 58.892 37.037 15.67 4.88 38.98 2.10
785 786 6.949463 AGTTAAGACTTGACTAGTAGGCTTCT 59.051 38.462 15.67 6.80 38.98 2.85
786 787 7.160547 AGTTAAGACTTGACTAGTAGGCTTC 57.839 40.000 15.67 4.82 38.98 3.86
787 788 7.889600 AGTAGTTAAGACTTGACTAGTAGGCTT 59.110 37.037 20.39 16.31 42.30 4.35
788 789 7.404481 AGTAGTTAAGACTTGACTAGTAGGCT 58.596 38.462 20.39 11.53 37.17 4.58
789 790 7.628769 AGTAGTTAAGACTTGACTAGTAGGC 57.371 40.000 20.39 9.87 37.17 3.93
791 792 8.829612 GCCTAGTAGTTAAGACTTGACTAGTAG 58.170 40.741 31.91 31.91 45.73 2.57
792 793 8.547173 AGCCTAGTAGTTAAGACTTGACTAGTA 58.453 37.037 23.27 23.27 40.40 1.82
793 794 7.404481 AGCCTAGTAGTTAAGACTTGACTAGT 58.596 38.462 23.47 23.47 40.40 2.57
794 795 7.868906 AGCCTAGTAGTTAAGACTTGACTAG 57.131 40.000 17.57 16.06 41.04 2.57
795 796 8.108364 AGAAGCCTAGTAGTTAAGACTTGACTA 58.892 37.037 14.15 14.15 37.33 2.59
796 797 6.949463 AGAAGCCTAGTAGTTAAGACTTGACT 59.051 38.462 16.02 16.02 37.33 3.41
797 798 7.160547 AGAAGCCTAGTAGTTAAGACTTGAC 57.839 40.000 1.94 1.94 37.33 3.18
798 799 8.874744 TTAGAAGCCTAGTAGTTAAGACTTGA 57.125 34.615 0.00 0.00 37.33 3.02
799 800 9.924650 TTTTAGAAGCCTAGTAGTTAAGACTTG 57.075 33.333 0.00 0.00 37.33 3.16
830 831 8.967918 GCTTATTCTAGAACCCTAACCAAATTT 58.032 33.333 7.48 0.00 0.00 1.82
831 832 8.336987 AGCTTATTCTAGAACCCTAACCAAATT 58.663 33.333 7.48 0.00 0.00 1.82
832 833 7.873195 AGCTTATTCTAGAACCCTAACCAAAT 58.127 34.615 7.48 0.00 0.00 2.32
833 834 7.266905 AGCTTATTCTAGAACCCTAACCAAA 57.733 36.000 7.48 0.00 0.00 3.28
834 835 6.886178 AGCTTATTCTAGAACCCTAACCAA 57.114 37.500 7.48 0.00 0.00 3.67
835 836 6.553852 CCTAGCTTATTCTAGAACCCTAACCA 59.446 42.308 7.48 0.00 38.61 3.67
836 837 6.554228 ACCTAGCTTATTCTAGAACCCTAACC 59.446 42.308 7.48 0.00 38.61 2.85
837 838 7.600231 ACCTAGCTTATTCTAGAACCCTAAC 57.400 40.000 7.48 0.00 38.61 2.34
838 839 7.949006 CCTACCTAGCTTATTCTAGAACCCTAA 59.051 40.741 7.48 2.22 38.61 2.69
839 840 7.468496 CCTACCTAGCTTATTCTAGAACCCTA 58.532 42.308 7.48 5.40 38.61 3.53
840 841 6.316513 CCTACCTAGCTTATTCTAGAACCCT 58.683 44.000 7.48 4.51 38.61 4.34
841 842 5.481122 CCCTACCTAGCTTATTCTAGAACCC 59.519 48.000 7.48 0.00 38.61 4.11
842 843 5.481122 CCCCTACCTAGCTTATTCTAGAACC 59.519 48.000 7.48 0.00 38.61 3.62
843 844 5.047164 GCCCCTACCTAGCTTATTCTAGAAC 60.047 48.000 7.48 0.00 38.61 3.01
844 845 5.085219 GCCCCTACCTAGCTTATTCTAGAA 58.915 45.833 7.82 7.82 38.61 2.10
845 846 4.107473 TGCCCCTACCTAGCTTATTCTAGA 59.893 45.833 0.00 0.00 38.61 2.43
846 847 4.417437 TGCCCCTACCTAGCTTATTCTAG 58.583 47.826 0.00 0.00 36.63 2.43
847 848 4.417437 CTGCCCCTACCTAGCTTATTCTA 58.583 47.826 0.00 0.00 0.00 2.10
848 849 3.243724 CTGCCCCTACCTAGCTTATTCT 58.756 50.000 0.00 0.00 0.00 2.40
849 850 2.289756 GCTGCCCCTACCTAGCTTATTC 60.290 54.545 0.00 0.00 33.53 1.75
850 851 1.700186 GCTGCCCCTACCTAGCTTATT 59.300 52.381 0.00 0.00 33.53 1.40
851 852 1.132689 AGCTGCCCCTACCTAGCTTAT 60.133 52.381 0.00 0.00 43.49 1.73
852 853 0.264955 AGCTGCCCCTACCTAGCTTA 59.735 55.000 0.00 0.00 43.49 3.09
853 854 1.003573 AGCTGCCCCTACCTAGCTT 59.996 57.895 0.00 0.00 43.49 3.74
854 855 2.699496 AGCTGCCCCTACCTAGCT 59.301 61.111 0.00 0.00 41.38 3.32
855 856 1.353091 ATAAGCTGCCCCTACCTAGC 58.647 55.000 0.00 0.00 36.45 3.42
856 857 2.551071 GCAATAAGCTGCCCCTACCTAG 60.551 54.545 0.00 0.00 41.15 3.02
857 858 1.420138 GCAATAAGCTGCCCCTACCTA 59.580 52.381 0.00 0.00 41.15 3.08
858 859 0.183731 GCAATAAGCTGCCCCTACCT 59.816 55.000 0.00 0.00 41.15 3.08
859 860 0.106719 TGCAATAAGCTGCCCCTACC 60.107 55.000 0.00 0.00 45.94 3.18
860 861 1.312815 CTGCAATAAGCTGCCCCTAC 58.687 55.000 0.00 0.00 45.94 3.18
861 862 3.806941 CTGCAATAAGCTGCCCCTA 57.193 52.632 0.00 0.00 45.94 3.53
862 863 4.672251 CTGCAATAAGCTGCCCCT 57.328 55.556 0.00 0.00 45.94 4.79
869 870 6.369799 GCTTCTAGAATAAGCTGCAATAAGC 58.630 40.000 5.44 3.48 44.75 3.09
870 871 6.484643 TGGCTTCTAGAATAAGCTGCAATAAG 59.515 38.462 13.28 0.00 46.81 1.73
871 872 6.356556 TGGCTTCTAGAATAAGCTGCAATAA 58.643 36.000 13.28 0.00 46.81 1.40
872 873 5.928976 TGGCTTCTAGAATAAGCTGCAATA 58.071 37.500 13.28 0.00 46.81 1.90
873 874 4.785301 TGGCTTCTAGAATAAGCTGCAAT 58.215 39.130 13.28 0.00 46.81 3.56
874 875 4.220693 TGGCTTCTAGAATAAGCTGCAA 57.779 40.909 13.28 0.69 46.81 4.08
875 876 3.912496 TGGCTTCTAGAATAAGCTGCA 57.088 42.857 13.28 3.14 46.81 4.41
876 877 4.384056 TGATGGCTTCTAGAATAAGCTGC 58.616 43.478 13.28 8.77 46.81 5.25
877 878 6.932356 TTTGATGGCTTCTAGAATAAGCTG 57.068 37.500 13.28 0.00 46.81 4.24
878 879 7.341805 TCTTTTGATGGCTTCTAGAATAAGCT 58.658 34.615 13.28 0.00 46.81 3.74
879 880 7.559590 TCTTTTGATGGCTTCTAGAATAAGC 57.440 36.000 5.44 5.98 46.90 3.09
880 881 9.171877 AGTTCTTTTGATGGCTTCTAGAATAAG 57.828 33.333 5.44 0.00 0.00 1.73
881 882 8.950210 CAGTTCTTTTGATGGCTTCTAGAATAA 58.050 33.333 5.44 0.00 0.00 1.40
882 883 7.554118 CCAGTTCTTTTGATGGCTTCTAGAATA 59.446 37.037 5.44 0.00 0.00 1.75
883 884 6.376581 CCAGTTCTTTTGATGGCTTCTAGAAT 59.623 38.462 5.44 0.00 0.00 2.40
884 885 5.707298 CCAGTTCTTTTGATGGCTTCTAGAA 59.293 40.000 4.81 4.81 0.00 2.10
885 886 5.248640 CCAGTTCTTTTGATGGCTTCTAGA 58.751 41.667 1.86 0.00 0.00 2.43
886 887 4.142513 GCCAGTTCTTTTGATGGCTTCTAG 60.143 45.833 7.78 0.00 46.07 2.43
887 888 3.758554 GCCAGTTCTTTTGATGGCTTCTA 59.241 43.478 7.78 0.00 46.07 2.10
888 889 2.560105 GCCAGTTCTTTTGATGGCTTCT 59.440 45.455 7.78 0.00 46.07 2.85
889 890 2.951726 GCCAGTTCTTTTGATGGCTTC 58.048 47.619 7.78 0.00 46.07 3.86
893 894 1.928868 AGGGCCAGTTCTTTTGATGG 58.071 50.000 6.18 0.00 32.99 3.51
894 895 4.082125 AGTTAGGGCCAGTTCTTTTGATG 58.918 43.478 6.18 0.00 0.00 3.07
895 896 4.336280 GAGTTAGGGCCAGTTCTTTTGAT 58.664 43.478 6.18 0.00 0.00 2.57
896 897 3.751518 GAGTTAGGGCCAGTTCTTTTGA 58.248 45.455 6.18 0.00 0.00 2.69
897 898 2.484264 CGAGTTAGGGCCAGTTCTTTTG 59.516 50.000 6.18 0.00 0.00 2.44
898 899 2.779506 CGAGTTAGGGCCAGTTCTTTT 58.220 47.619 6.18 0.00 0.00 2.27
899 900 1.610886 GCGAGTTAGGGCCAGTTCTTT 60.611 52.381 6.18 0.00 0.00 2.52
900 901 0.036294 GCGAGTTAGGGCCAGTTCTT 60.036 55.000 6.18 0.00 0.00 2.52
901 902 0.905337 AGCGAGTTAGGGCCAGTTCT 60.905 55.000 6.18 0.00 0.00 3.01
902 903 0.822164 TAGCGAGTTAGGGCCAGTTC 59.178 55.000 6.18 0.00 0.00 3.01
903 904 0.824759 CTAGCGAGTTAGGGCCAGTT 59.175 55.000 6.18 0.00 0.00 3.16
904 905 0.324460 ACTAGCGAGTTAGGGCCAGT 60.324 55.000 6.18 0.00 28.61 4.00
905 906 0.103208 CACTAGCGAGTTAGGGCCAG 59.897 60.000 6.18 0.00 31.73 4.85
906 907 1.327690 CCACTAGCGAGTTAGGGCCA 61.328 60.000 6.18 0.00 31.73 5.36
907 908 1.442148 CCACTAGCGAGTTAGGGCC 59.558 63.158 0.00 0.00 31.73 5.80
908 909 1.442148 CCCACTAGCGAGTTAGGGC 59.558 63.158 9.07 0.00 33.35 5.19
909 910 1.442148 GCCCACTAGCGAGTTAGGG 59.558 63.158 15.60 15.60 40.48 3.53
918 919 1.301009 GCATAGGTCGCCCACTAGC 60.301 63.158 0.00 0.00 0.00 3.42
919 920 0.315568 GAGCATAGGTCGCCCACTAG 59.684 60.000 0.00 0.00 0.00 2.57
920 921 0.396556 TGAGCATAGGTCGCCCACTA 60.397 55.000 0.00 0.00 32.15 2.74
921 922 1.050988 ATGAGCATAGGTCGCCCACT 61.051 55.000 0.00 0.00 32.15 4.00
922 923 0.679505 TATGAGCATAGGTCGCCCAC 59.320 55.000 0.00 0.00 32.15 4.61
923 924 0.969149 CTATGAGCATAGGTCGCCCA 59.031 55.000 9.18 0.00 37.66 5.36
924 925 0.390472 GCTATGAGCATAGGTCGCCC 60.390 60.000 16.76 0.00 41.89 6.13
925 926 0.605589 AGCTATGAGCATAGGTCGCC 59.394 55.000 14.55 1.42 45.84 5.54
930 931 5.121811 ACAGACAAAAGCTATGAGCATAGG 58.878 41.667 16.76 4.90 45.56 2.57
931 932 6.674694 AACAGACAAAAGCTATGAGCATAG 57.325 37.500 12.10 12.10 45.56 2.23
932 933 6.127925 CCAAACAGACAAAAGCTATGAGCATA 60.128 38.462 6.45 0.00 45.56 3.14
933 934 5.336213 CCAAACAGACAAAAGCTATGAGCAT 60.336 40.000 6.45 0.00 45.56 3.79
934 935 4.022935 CCAAACAGACAAAAGCTATGAGCA 60.023 41.667 6.45 0.00 45.56 4.26
935 936 4.479619 CCAAACAGACAAAAGCTATGAGC 58.520 43.478 6.45 0.00 42.84 4.26
936 937 4.217118 AGCCAAACAGACAAAAGCTATGAG 59.783 41.667 6.45 0.00 0.00 2.90
937 938 4.144297 AGCCAAACAGACAAAAGCTATGA 58.856 39.130 6.45 0.00 0.00 2.15
938 939 4.510038 AGCCAAACAGACAAAAGCTATG 57.490 40.909 0.00 0.00 0.00 2.23
939 940 4.156739 GCTAGCCAAACAGACAAAAGCTAT 59.843 41.667 2.29 0.00 31.50 2.97
940 941 3.502211 GCTAGCCAAACAGACAAAAGCTA 59.498 43.478 2.29 0.00 0.00 3.32
941 942 2.294512 GCTAGCCAAACAGACAAAAGCT 59.705 45.455 2.29 0.00 0.00 3.74
942 943 2.294512 AGCTAGCCAAACAGACAAAAGC 59.705 45.455 12.13 0.00 0.00 3.51
943 944 5.886960 ATAGCTAGCCAAACAGACAAAAG 57.113 39.130 12.13 0.00 0.00 2.27
944 945 9.627123 ATTATATAGCTAGCCAAACAGACAAAA 57.373 29.630 12.13 0.00 0.00 2.44
957 958 7.494625 ACAGACTCGAGAGATTATATAGCTAGC 59.505 40.741 21.68 6.62 40.84 3.42
977 978 7.792032 TCGGATCCAATTAAGATTAACAGACT 58.208 34.615 13.41 0.00 0.00 3.24
978 979 8.433421 TTCGGATCCAATTAAGATTAACAGAC 57.567 34.615 13.41 0.00 0.00 3.51
981 982 7.201661 CGGTTTCGGATCCAATTAAGATTAACA 60.202 37.037 13.41 0.00 0.00 2.41
982 983 7.130269 CGGTTTCGGATCCAATTAAGATTAAC 58.870 38.462 13.41 2.36 0.00 2.01
1011 1016 0.179040 TGTGGTCGGGTCCAACTTTC 60.179 55.000 0.00 0.00 39.34 2.62
1063 1069 6.096564 CGGAGTATATATGTAGGGGAGTTTCC 59.903 46.154 0.00 0.00 35.23 3.13
1241 1567 2.048503 GCTCCGTACCACGCTTGT 60.049 61.111 0.00 0.00 40.91 3.16
1329 1655 2.207924 AACGAGCGGAGTTGGACCT 61.208 57.895 0.00 0.00 0.00 3.85
1573 1899 5.140747 AGCACGTAGAGTTTGAGATTTCT 57.859 39.130 0.00 0.00 0.00 2.52
1587 1913 2.022195 TCTACCTAGCCAAGCACGTAG 58.978 52.381 0.00 0.00 0.00 3.51
1614 1940 6.857777 TTGATTTCGTAACGGGTTCTTTTA 57.142 33.333 0.00 0.00 0.00 1.52
1630 1956 4.398044 TCAAGTTAGCCCGGATTTGATTTC 59.602 41.667 0.73 0.00 0.00 2.17
1641 1967 4.701956 AATCACAAATCAAGTTAGCCCG 57.298 40.909 0.00 0.00 0.00 6.13
1746 2087 1.638133 CTTCAGCTCACACATCTCCG 58.362 55.000 0.00 0.00 0.00 4.63
1972 2313 5.177511 TGTTTCTTCTTGCTTGACTCGTATG 59.822 40.000 0.00 0.00 0.00 2.39
2030 2371 1.001624 ATTAACGTAAACGAGCGGCC 58.998 50.000 9.86 0.00 43.02 6.13
2031 2372 1.655099 TGATTAACGTAAACGAGCGGC 59.345 47.619 9.86 0.00 43.02 6.53
2181 2526 8.458573 ACAAATAAACAAGGATGTAGTGAACA 57.541 30.769 0.00 0.00 43.86 3.18
2336 2723 5.404366 TGACAGCTAACACAGTCGTTAATTC 59.596 40.000 0.00 0.00 33.83 2.17
2402 2789 2.198287 GGGGTATGCGCTAGGTCGA 61.198 63.158 9.73 0.00 0.00 4.20
2750 3146 9.921637 AAGTTTGGAAAATTATCGCTGATTAAA 57.078 25.926 0.00 0.00 0.00 1.52
3162 3569 1.144913 AGCACATGTACCCCTGTTTGT 59.855 47.619 0.00 0.00 0.00 2.83
3163 3570 1.909700 AGCACATGTACCCCTGTTTG 58.090 50.000 0.00 0.00 0.00 2.93
3257 3667 2.358737 CACGCACCTTCCACTCCC 60.359 66.667 0.00 0.00 0.00 4.30
3297 3707 0.321996 GGACCTCCTTTTCTGCGACT 59.678 55.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.