Multiple sequence alignment - TraesCS2D01G164500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G164500 chr2D 100.000 3092 0 0 1 3092 109029749 109032840 0.000000e+00 5710.0
1 TraesCS2D01G164500 chr2D 91.919 1782 136 8 896 2670 109554163 109555943 0.000000e+00 2486.0
2 TraesCS2D01G164500 chr2D 92.195 1640 119 9 1461 3092 109129690 109131328 0.000000e+00 2311.0
3 TraesCS2D01G164500 chr2D 87.922 770 80 9 714 1477 109128926 109128164 0.000000e+00 894.0
4 TraesCS2D01G164500 chr2D 80.835 407 40 23 506 905 109553747 109554122 5.050000e-73 285.0
5 TraesCS2D01G164500 chr2D 98.734 158 2 0 1 158 23072255 23072412 6.530000e-72 281.0
6 TraesCS2D01G164500 chr2D 98.734 158 2 0 1 158 589605897 589606054 6.530000e-72 281.0
7 TraesCS2D01G164500 chr2D 96.939 98 3 0 158 255 109019706 109019803 6.860000e-37 165.0
8 TraesCS2D01G164500 chr2D 87.970 133 8 3 2693 2817 109577446 109577578 1.920000e-32 150.0
9 TraesCS2D01G164500 chr2D 96.552 58 2 0 417 474 109019802 109019859 2.540000e-16 97.1
10 TraesCS2D01G164500 chr2B 88.920 2130 171 31 714 2817 159098163 159100253 0.000000e+00 2566.0
11 TraesCS2D01G164500 chr2B 89.076 1309 111 16 715 1995 158863300 158864604 0.000000e+00 1596.0
12 TraesCS2D01G164500 chr2B 92.029 552 43 1 1991 2542 158869145 158869695 0.000000e+00 774.0
13 TraesCS2D01G164500 chr2B 75.342 1314 291 21 1018 2304 6178720 6180027 4.410000e-168 601.0
14 TraesCS2D01G164500 chr2A 90.805 1740 139 8 814 2543 105407230 105408958 0.000000e+00 2307.0
15 TraesCS2D01G164500 chr2A 88.557 201 22 1 2893 3092 769472079 769471879 3.080000e-60 243.0
16 TraesCS2D01G164500 chr3D 80.478 1506 266 17 906 2405 22272516 22273999 0.000000e+00 1127.0
17 TraesCS2D01G164500 chr3D 80.608 1480 260 13 932 2405 22223238 22224696 0.000000e+00 1118.0
18 TraesCS2D01G164500 chr3D 98.726 157 2 0 1 157 576333788 576333944 2.350000e-71 279.0
19 TraesCS2D01G164500 chr3D 87.879 231 27 1 2863 3092 3400147 3399917 1.410000e-68 270.0
20 TraesCS2D01G164500 chr3D 95.783 166 7 0 253 418 526050790 526050625 5.080000e-68 268.0
21 TraesCS2D01G164500 chr3D 82.418 182 24 8 2814 2990 610599611 610599789 5.340000e-33 152.0
22 TraesCS2D01G164500 chr3B 80.525 1448 253 16 965 2405 39440966 39442391 0.000000e+00 1085.0
23 TraesCS2D01G164500 chr3B 85.830 247 33 2 2846 3091 63458332 63458087 8.500000e-66 261.0
24 TraesCS2D01G164500 chr7A 75.720 1355 308 16 1018 2355 51090589 51091939 0.000000e+00 660.0
25 TraesCS2D01G164500 chr7A 86.121 281 34 4 2814 3092 243485174 243484897 6.480000e-77 298.0
26 TraesCS2D01G164500 chr7A 93.143 175 11 1 245 418 156115830 156116004 3.960000e-64 255.0
27 TraesCS2D01G164500 chr7A 77.222 180 26 12 2814 2984 696556460 696556633 1.180000e-14 91.6
28 TraesCS2D01G164500 chr3A 82.542 716 111 9 968 1673 31962935 31962224 4.380000e-173 617.0
29 TraesCS2D01G164500 chr3A 85.461 282 37 4 2814 3092 705581787 705581507 1.080000e-74 291.0
30 TraesCS2D01G164500 chr7D 98.726 157 2 0 1 157 9476079 9475923 2.350000e-71 279.0
31 TraesCS2D01G164500 chr7D 98.726 157 2 0 1 157 96423608 96423764 2.350000e-71 279.0
32 TraesCS2D01G164500 chr7D 95.906 171 5 2 1 171 15883997 15883829 3.040000e-70 276.0
33 TraesCS2D01G164500 chr7D 93.605 172 11 0 248 419 30293645 30293816 1.100000e-64 257.0
34 TraesCS2D01G164500 chr7D 91.304 184 12 3 249 432 175673114 175672935 6.620000e-62 248.0
35 TraesCS2D01G164500 chr6D 98.726 157 2 0 1 157 446527152 446527308 2.350000e-71 279.0
36 TraesCS2D01G164500 chr6D 93.220 177 10 2 244 419 41542660 41542485 3.060000e-65 259.0
37 TraesCS2D01G164500 chr5D 98.113 159 3 0 1 159 47092363 47092521 8.440000e-71 278.0
38 TraesCS2D01G164500 chr4D 96.933 163 5 0 1 163 493002414 493002576 1.090000e-69 274.0
39 TraesCS2D01G164500 chr1D 93.678 174 11 0 245 418 9218381 9218208 8.500000e-66 261.0
40 TraesCS2D01G164500 chr1D 92.391 184 11 3 237 419 459839400 459839219 3.060000e-65 259.0
41 TraesCS2D01G164500 chr1D 91.713 181 13 2 240 419 120787808 120787987 1.840000e-62 250.0
42 TraesCS2D01G164500 chr1A 94.611 167 9 0 253 419 295312716 295312882 3.060000e-65 259.0
43 TraesCS2D01G164500 chr5B 93.878 98 6 0 158 255 37794932 37794835 6.910000e-32 148.0
44 TraesCS2D01G164500 chr5B 89.744 78 4 4 417 491 37794836 37794760 2.540000e-16 97.1
45 TraesCS2D01G164500 chr5B 94.828 58 3 0 417 474 37805047 37804990 1.180000e-14 91.6
46 TraesCS2D01G164500 chr4A 89.796 98 10 0 158 255 208816121 208816218 3.240000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G164500 chr2D 109029749 109032840 3091 False 5710.0 5710 100.000 1 3092 1 chr2D.!!$F2 3091
1 TraesCS2D01G164500 chr2D 109129690 109131328 1638 False 2311.0 2311 92.195 1461 3092 1 chr2D.!!$F3 1631
2 TraesCS2D01G164500 chr2D 109553747 109555943 2196 False 1385.5 2486 86.377 506 2670 2 chr2D.!!$F7 2164
3 TraesCS2D01G164500 chr2D 109128164 109128926 762 True 894.0 894 87.922 714 1477 1 chr2D.!!$R1 763
4 TraesCS2D01G164500 chr2B 159098163 159100253 2090 False 2566.0 2566 88.920 714 2817 1 chr2B.!!$F4 2103
5 TraesCS2D01G164500 chr2B 158863300 158864604 1304 False 1596.0 1596 89.076 715 1995 1 chr2B.!!$F2 1280
6 TraesCS2D01G164500 chr2B 158869145 158869695 550 False 774.0 774 92.029 1991 2542 1 chr2B.!!$F3 551
7 TraesCS2D01G164500 chr2B 6178720 6180027 1307 False 601.0 601 75.342 1018 2304 1 chr2B.!!$F1 1286
8 TraesCS2D01G164500 chr2A 105407230 105408958 1728 False 2307.0 2307 90.805 814 2543 1 chr2A.!!$F1 1729
9 TraesCS2D01G164500 chr3D 22272516 22273999 1483 False 1127.0 1127 80.478 906 2405 1 chr3D.!!$F2 1499
10 TraesCS2D01G164500 chr3D 22223238 22224696 1458 False 1118.0 1118 80.608 932 2405 1 chr3D.!!$F1 1473
11 TraesCS2D01G164500 chr3B 39440966 39442391 1425 False 1085.0 1085 80.525 965 2405 1 chr3B.!!$F1 1440
12 TraesCS2D01G164500 chr7A 51090589 51091939 1350 False 660.0 660 75.720 1018 2355 1 chr7A.!!$F1 1337
13 TraesCS2D01G164500 chr3A 31962224 31962935 711 True 617.0 617 82.542 968 1673 1 chr3A.!!$R1 705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
887 916 0.032217 CAGGCCTCTCTCTCTCCCTT 60.032 60.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 2199 1.000955 ACCGATTCGAGCACTGAGTTT 59.999 47.619 7.83 0.0 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.689224 CGTGACACGAATCGGTACT 57.311 52.632 23.39 0.00 46.05 2.73
21 22 2.811902 CGTGACACGAATCGGTACTA 57.188 50.000 23.39 0.00 46.05 1.82
22 23 3.121559 CGTGACACGAATCGGTACTAA 57.878 47.619 23.39 0.00 46.05 2.24
23 24 3.491356 CGTGACACGAATCGGTACTAAA 58.509 45.455 23.39 0.00 46.05 1.85
24 25 3.541130 CGTGACACGAATCGGTACTAAAG 59.459 47.826 23.39 0.00 46.05 1.85
25 26 3.855950 GTGACACGAATCGGTACTAAAGG 59.144 47.826 7.80 0.00 0.00 3.11
26 27 3.507233 TGACACGAATCGGTACTAAAGGT 59.493 43.478 7.80 0.00 0.00 3.50
27 28 4.022068 TGACACGAATCGGTACTAAAGGTT 60.022 41.667 7.80 0.00 0.00 3.50
28 29 4.240096 ACACGAATCGGTACTAAAGGTTG 58.760 43.478 7.80 0.00 0.00 3.77
29 30 3.061697 CACGAATCGGTACTAAAGGTTGC 59.938 47.826 7.80 0.00 0.00 4.17
30 31 3.056322 ACGAATCGGTACTAAAGGTTGCT 60.056 43.478 7.80 0.00 0.00 3.91
31 32 3.550678 CGAATCGGTACTAAAGGTTGCTC 59.449 47.826 0.00 0.00 0.00 4.26
32 33 4.501071 GAATCGGTACTAAAGGTTGCTCA 58.499 43.478 0.00 0.00 0.00 4.26
33 34 3.308438 TCGGTACTAAAGGTTGCTCAC 57.692 47.619 0.00 0.00 0.00 3.51
34 35 1.990563 CGGTACTAAAGGTTGCTCACG 59.009 52.381 0.00 0.00 0.00 4.35
35 36 2.352030 CGGTACTAAAGGTTGCTCACGA 60.352 50.000 0.00 0.00 0.00 4.35
36 37 3.656559 GGTACTAAAGGTTGCTCACGAA 58.343 45.455 0.00 0.00 0.00 3.85
37 38 3.431233 GGTACTAAAGGTTGCTCACGAAC 59.569 47.826 0.00 0.00 0.00 3.95
38 39 2.490991 ACTAAAGGTTGCTCACGAACC 58.509 47.619 0.00 0.00 42.91 3.62
39 40 1.459592 CTAAAGGTTGCTCACGAACCG 59.540 52.381 0.00 0.00 46.49 4.44
40 41 1.164041 AAAGGTTGCTCACGAACCGG 61.164 55.000 0.00 0.00 46.49 5.28
41 42 2.280592 GGTTGCTCACGAACCGGT 60.281 61.111 0.00 0.00 33.85 5.28
42 43 1.005867 GGTTGCTCACGAACCGGTA 60.006 57.895 8.00 0.00 33.85 4.02
43 44 1.287041 GGTTGCTCACGAACCGGTAC 61.287 60.000 8.00 0.00 33.85 3.34
44 45 0.319297 GTTGCTCACGAACCGGTACT 60.319 55.000 8.00 0.00 0.00 2.73
45 46 1.068333 GTTGCTCACGAACCGGTACTA 60.068 52.381 8.00 0.00 0.00 1.82
46 47 1.246649 TGCTCACGAACCGGTACTAA 58.753 50.000 8.00 0.00 0.00 2.24
47 48 1.820519 TGCTCACGAACCGGTACTAAT 59.179 47.619 8.00 0.00 0.00 1.73
48 49 2.190981 GCTCACGAACCGGTACTAATG 58.809 52.381 8.00 2.41 0.00 1.90
49 50 2.159338 GCTCACGAACCGGTACTAATGA 60.159 50.000 8.00 7.15 0.00 2.57
50 51 3.490419 GCTCACGAACCGGTACTAATGAT 60.490 47.826 8.00 0.00 0.00 2.45
51 52 4.288531 CTCACGAACCGGTACTAATGATC 58.711 47.826 8.00 0.00 0.00 2.92
52 53 3.949754 TCACGAACCGGTACTAATGATCT 59.050 43.478 8.00 0.00 0.00 2.75
53 54 4.036027 TCACGAACCGGTACTAATGATCTC 59.964 45.833 8.00 0.00 0.00 2.75
54 55 3.317430 ACGAACCGGTACTAATGATCTCC 59.683 47.826 8.00 0.00 0.00 3.71
55 56 3.608707 CGAACCGGTACTAATGATCTCCG 60.609 52.174 8.00 0.00 38.05 4.63
56 57 1.612463 ACCGGTACTAATGATCTCCGC 59.388 52.381 4.49 0.00 37.17 5.54
57 58 1.067776 CCGGTACTAATGATCTCCGCC 60.068 57.143 0.00 0.00 37.17 6.13
58 59 1.067776 CGGTACTAATGATCTCCGCCC 60.068 57.143 0.00 0.00 0.00 6.13
59 60 1.067776 GGTACTAATGATCTCCGCCCG 60.068 57.143 0.00 0.00 0.00 6.13
60 61 0.601558 TACTAATGATCTCCGCCCGC 59.398 55.000 0.00 0.00 0.00 6.13
61 62 1.374758 CTAATGATCTCCGCCCGCC 60.375 63.158 0.00 0.00 0.00 6.13
62 63 1.821061 CTAATGATCTCCGCCCGCCT 61.821 60.000 0.00 0.00 0.00 5.52
63 64 0.541063 TAATGATCTCCGCCCGCCTA 60.541 55.000 0.00 0.00 0.00 3.93
64 65 1.821061 AATGATCTCCGCCCGCCTAG 61.821 60.000 0.00 0.00 0.00 3.02
65 66 4.365505 GATCTCCGCCCGCCTAGC 62.366 72.222 0.00 0.00 0.00 3.42
73 74 4.090588 CCCGCCTAGCCGTTGGAA 62.091 66.667 0.00 0.00 0.00 3.53
74 75 2.818274 CCGCCTAGCCGTTGGAAC 60.818 66.667 0.00 0.00 0.00 3.62
75 76 2.818274 CGCCTAGCCGTTGGAACC 60.818 66.667 0.00 0.00 0.00 3.62
76 77 2.818274 GCCTAGCCGTTGGAACCG 60.818 66.667 0.00 0.00 0.00 4.44
77 78 2.975536 CCTAGCCGTTGGAACCGA 59.024 61.111 0.00 0.00 0.00 4.69
78 79 1.447314 CCTAGCCGTTGGAACCGAC 60.447 63.158 1.37 1.37 0.00 4.79
79 80 1.290955 CTAGCCGTTGGAACCGACA 59.709 57.895 11.21 0.00 0.00 4.35
80 81 1.005867 TAGCCGTTGGAACCGACAC 60.006 57.895 11.21 3.28 0.00 3.67
81 82 1.466025 TAGCCGTTGGAACCGACACT 61.466 55.000 11.21 9.59 0.00 3.55
82 83 1.005867 GCCGTTGGAACCGACACTA 60.006 57.895 11.21 0.00 0.00 2.74
83 84 0.600782 GCCGTTGGAACCGACACTAA 60.601 55.000 11.21 0.00 0.00 2.24
84 85 1.942586 GCCGTTGGAACCGACACTAAT 60.943 52.381 11.21 0.00 0.00 1.73
85 86 1.730064 CCGTTGGAACCGACACTAATG 59.270 52.381 11.21 0.00 0.00 1.90
86 87 1.730064 CGTTGGAACCGACACTAATGG 59.270 52.381 11.21 0.00 0.00 3.16
87 88 2.610976 CGTTGGAACCGACACTAATGGA 60.611 50.000 11.21 0.00 0.00 3.41
88 89 2.740447 GTTGGAACCGACACTAATGGAC 59.260 50.000 6.37 0.00 0.00 4.02
89 90 1.972075 TGGAACCGACACTAATGGACA 59.028 47.619 0.00 0.00 0.00 4.02
90 91 2.289195 TGGAACCGACACTAATGGACAC 60.289 50.000 0.00 0.00 0.00 3.67
91 92 2.289195 GGAACCGACACTAATGGACACA 60.289 50.000 0.00 0.00 0.00 3.72
92 93 3.596214 GAACCGACACTAATGGACACAT 58.404 45.455 0.00 0.00 39.54 3.21
94 95 4.811969 ACCGACACTAATGGACACATTA 57.188 40.909 0.00 0.00 45.17 1.90
105 106 4.615901 CACATTAGTGCCGGCTCA 57.384 55.556 29.70 9.72 39.21 4.26
106 107 2.853159 CACATTAGTGCCGGCTCAA 58.147 52.632 29.70 19.77 39.21 3.02
107 108 1.164411 CACATTAGTGCCGGCTCAAA 58.836 50.000 29.70 18.42 39.21 2.69
108 109 1.539388 CACATTAGTGCCGGCTCAAAA 59.461 47.619 29.70 21.42 39.21 2.44
109 110 2.164219 CACATTAGTGCCGGCTCAAAAT 59.836 45.455 29.70 22.61 39.21 1.82
110 111 2.423538 ACATTAGTGCCGGCTCAAAATC 59.576 45.455 29.70 8.96 0.00 2.17
111 112 2.192664 TTAGTGCCGGCTCAAAATCA 57.807 45.000 29.70 0.07 0.00 2.57
112 113 2.192664 TAGTGCCGGCTCAAAATCAA 57.807 45.000 29.70 0.00 0.00 2.57
113 114 1.327303 AGTGCCGGCTCAAAATCAAA 58.673 45.000 29.70 0.00 0.00 2.69
114 115 1.000274 AGTGCCGGCTCAAAATCAAAC 60.000 47.619 29.70 13.21 0.00 2.93
115 116 0.316841 TGCCGGCTCAAAATCAAACC 59.683 50.000 29.70 0.00 0.00 3.27
116 117 0.732538 GCCGGCTCAAAATCAAACCG 60.733 55.000 22.15 0.00 40.30 4.44
117 118 3.399879 CGGCTCAAAATCAAACCGG 57.600 52.632 0.00 0.00 37.04 5.28
118 119 0.732538 CGGCTCAAAATCAAACCGGC 60.733 55.000 0.00 0.00 37.04 6.13
119 120 0.316841 GGCTCAAAATCAAACCGGCA 59.683 50.000 0.00 0.00 0.00 5.69
120 121 1.418373 GCTCAAAATCAAACCGGCAC 58.582 50.000 0.00 0.00 0.00 5.01
121 122 1.000274 GCTCAAAATCAAACCGGCACT 60.000 47.619 0.00 0.00 0.00 4.40
122 123 2.227865 GCTCAAAATCAAACCGGCACTA 59.772 45.455 0.00 0.00 0.00 2.74
123 124 3.305064 GCTCAAAATCAAACCGGCACTAA 60.305 43.478 0.00 0.00 0.00 2.24
124 125 4.618227 GCTCAAAATCAAACCGGCACTAAT 60.618 41.667 0.00 0.00 0.00 1.73
125 126 4.804108 TCAAAATCAAACCGGCACTAATG 58.196 39.130 0.00 0.00 0.00 1.90
126 127 4.279671 TCAAAATCAAACCGGCACTAATGT 59.720 37.500 0.00 0.00 0.00 2.71
127 128 3.848272 AATCAAACCGGCACTAATGTG 57.152 42.857 0.00 0.00 46.37 3.21
143 144 2.363306 TGTGCTTCACATTTGACCCT 57.637 45.000 0.00 0.00 39.62 4.34
144 145 2.665165 TGTGCTTCACATTTGACCCTT 58.335 42.857 0.00 0.00 39.62 3.95
145 146 3.030291 TGTGCTTCACATTTGACCCTTT 58.970 40.909 0.00 0.00 39.62 3.11
146 147 3.450457 TGTGCTTCACATTTGACCCTTTT 59.550 39.130 0.00 0.00 39.62 2.27
147 148 4.081198 TGTGCTTCACATTTGACCCTTTTT 60.081 37.500 0.00 0.00 39.62 1.94
148 149 4.507756 GTGCTTCACATTTGACCCTTTTTC 59.492 41.667 0.00 0.00 34.08 2.29
149 150 4.405358 TGCTTCACATTTGACCCTTTTTCT 59.595 37.500 0.00 0.00 0.00 2.52
150 151 5.596361 TGCTTCACATTTGACCCTTTTTCTA 59.404 36.000 0.00 0.00 0.00 2.10
151 152 5.920840 GCTTCACATTTGACCCTTTTTCTAC 59.079 40.000 0.00 0.00 0.00 2.59
152 153 6.239036 GCTTCACATTTGACCCTTTTTCTACT 60.239 38.462 0.00 0.00 0.00 2.57
153 154 7.040686 GCTTCACATTTGACCCTTTTTCTACTA 60.041 37.037 0.00 0.00 0.00 1.82
154 155 7.979444 TCACATTTGACCCTTTTTCTACTAG 57.021 36.000 0.00 0.00 0.00 2.57
155 156 7.514721 TCACATTTGACCCTTTTTCTACTAGT 58.485 34.615 0.00 0.00 0.00 2.57
156 157 7.444183 TCACATTTGACCCTTTTTCTACTAGTG 59.556 37.037 5.39 0.00 0.00 2.74
157 158 7.444183 CACATTTGACCCTTTTTCTACTAGTGA 59.556 37.037 5.39 0.00 0.00 3.41
158 159 7.661847 ACATTTGACCCTTTTTCTACTAGTGAG 59.338 37.037 5.39 0.00 0.00 3.51
159 160 6.989155 TTGACCCTTTTTCTACTAGTGAGA 57.011 37.500 5.39 1.93 0.00 3.27
160 161 6.591750 TGACCCTTTTTCTACTAGTGAGAG 57.408 41.667 5.39 0.00 0.00 3.20
161 162 6.075984 TGACCCTTTTTCTACTAGTGAGAGT 58.924 40.000 5.39 0.00 0.00 3.24
162 163 6.553852 TGACCCTTTTTCTACTAGTGAGAGTT 59.446 38.462 5.39 0.00 0.00 3.01
163 164 7.727186 TGACCCTTTTTCTACTAGTGAGAGTTA 59.273 37.037 5.39 0.00 0.00 2.24
164 165 7.894708 ACCCTTTTTCTACTAGTGAGAGTTAC 58.105 38.462 5.39 0.00 0.00 2.50
165 166 7.508296 ACCCTTTTTCTACTAGTGAGAGTTACA 59.492 37.037 5.39 0.00 0.00 2.41
166 167 8.365647 CCCTTTTTCTACTAGTGAGAGTTACAA 58.634 37.037 5.39 0.00 0.00 2.41
167 168 9.930693 CCTTTTTCTACTAGTGAGAGTTACAAT 57.069 33.333 5.39 0.00 0.00 2.71
172 173 9.511272 TTCTACTAGTGAGAGTTACAATGTACA 57.489 33.333 5.39 0.00 0.00 2.90
173 174 9.682465 TCTACTAGTGAGAGTTACAATGTACAT 57.318 33.333 5.39 1.41 0.00 2.29
176 177 9.239551 ACTAGTGAGAGTTACAATGTACATACA 57.760 33.333 9.21 0.00 40.98 2.29
184 185 9.649167 GAGTTACAATGTACATACATATACCCC 57.351 37.037 9.21 0.00 45.55 4.95
185 186 8.308931 AGTTACAATGTACATACATATACCCCG 58.691 37.037 9.21 0.00 45.55 5.73
186 187 5.484715 ACAATGTACATACATATACCCCGC 58.515 41.667 9.21 0.00 45.55 6.13
187 188 5.012251 ACAATGTACATACATATACCCCGCA 59.988 40.000 9.21 0.00 45.55 5.69
188 189 4.794278 TGTACATACATATACCCCGCAG 57.206 45.455 0.00 0.00 0.00 5.18
189 190 4.161565 ATGTACATACATATACCCCGCAGG 59.838 45.833 6.56 0.00 46.67 4.85
201 202 2.511145 CGCAGGGAGAGAGCAAGC 60.511 66.667 0.00 0.00 0.00 4.01
202 203 2.511145 GCAGGGAGAGAGCAAGCG 60.511 66.667 0.00 0.00 0.00 4.68
203 204 2.511145 CAGGGAGAGAGCAAGCGC 60.511 66.667 0.00 0.00 38.99 5.92
214 215 3.098032 GCAAGCGCTTCTGGAAAAG 57.902 52.632 22.21 7.64 34.30 2.27
215 216 0.593128 GCAAGCGCTTCTGGAAAAGA 59.407 50.000 22.21 0.00 34.30 2.52
216 217 1.400759 GCAAGCGCTTCTGGAAAAGAG 60.401 52.381 22.21 6.03 35.91 2.85
217 218 1.198637 CAAGCGCTTCTGGAAAAGAGG 59.801 52.381 22.21 0.00 35.91 3.69
222 223 0.519077 CTTCTGGAAAAGAGGCACGC 59.481 55.000 0.00 0.00 35.91 5.34
223 224 0.108585 TTCTGGAAAAGAGGCACGCT 59.891 50.000 0.00 0.00 43.09 5.07
224 225 0.603707 TCTGGAAAAGAGGCACGCTG 60.604 55.000 0.00 0.00 37.64 5.18
225 226 1.580845 CTGGAAAAGAGGCACGCTGG 61.581 60.000 0.00 0.00 37.64 4.85
226 227 2.563427 GAAAAGAGGCACGCTGGC 59.437 61.111 3.87 3.87 37.64 4.85
237 238 4.688419 CGCTGGCCACAAGCGTTG 62.688 66.667 25.12 4.91 45.59 4.10
239 240 3.289834 CTGGCCACAAGCGTTGCT 61.290 61.111 0.00 0.00 45.17 3.91
240 241 1.965930 CTGGCCACAAGCGTTGCTA 60.966 57.895 0.00 0.00 45.17 3.49
241 242 1.915614 CTGGCCACAAGCGTTGCTAG 61.916 60.000 0.00 0.00 45.17 3.42
242 243 1.671054 GGCCACAAGCGTTGCTAGA 60.671 57.895 0.00 0.00 45.17 2.43
243 244 1.026718 GGCCACAAGCGTTGCTAGAT 61.027 55.000 0.00 0.00 45.17 1.98
244 245 0.375106 GCCACAAGCGTTGCTAGATC 59.625 55.000 0.00 0.00 38.25 2.75
245 246 1.009829 CCACAAGCGTTGCTAGATCC 58.990 55.000 0.00 0.00 38.25 3.36
246 247 1.406069 CCACAAGCGTTGCTAGATCCT 60.406 52.381 0.00 0.00 38.25 3.24
247 248 2.159099 CCACAAGCGTTGCTAGATCCTA 60.159 50.000 0.00 0.00 38.25 2.94
248 249 3.521560 CACAAGCGTTGCTAGATCCTAA 58.478 45.455 0.00 0.00 38.25 2.69
249 250 4.122776 CACAAGCGTTGCTAGATCCTAAT 58.877 43.478 0.00 0.00 38.25 1.73
250 251 5.289595 CACAAGCGTTGCTAGATCCTAATA 58.710 41.667 0.00 0.00 38.25 0.98
251 252 5.928839 CACAAGCGTTGCTAGATCCTAATAT 59.071 40.000 0.00 0.00 38.25 1.28
252 253 6.090088 CACAAGCGTTGCTAGATCCTAATATC 59.910 42.308 0.00 0.00 38.25 1.63
253 254 6.015010 ACAAGCGTTGCTAGATCCTAATATCT 60.015 38.462 0.00 0.00 38.25 1.98
254 255 7.176865 ACAAGCGTTGCTAGATCCTAATATCTA 59.823 37.037 0.00 0.00 38.25 1.98
255 256 7.090953 AGCGTTGCTAGATCCTAATATCTAC 57.909 40.000 0.00 0.00 36.99 2.59
256 257 6.887545 AGCGTTGCTAGATCCTAATATCTACT 59.112 38.462 0.00 0.00 36.99 2.57
257 258 7.066525 AGCGTTGCTAGATCCTAATATCTACTC 59.933 40.741 0.00 0.00 36.99 2.59
258 259 7.680113 GCGTTGCTAGATCCTAATATCTACTCC 60.680 44.444 0.00 0.00 37.41 3.85
259 260 7.201750 CGTTGCTAGATCCTAATATCTACTCCC 60.202 44.444 0.00 0.00 37.41 4.30
260 261 7.532459 TGCTAGATCCTAATATCTACTCCCT 57.468 40.000 0.00 0.00 37.41 4.20
261 262 7.579105 TGCTAGATCCTAATATCTACTCCCTC 58.421 42.308 0.00 0.00 37.41 4.30
262 263 7.002276 GCTAGATCCTAATATCTACTCCCTCC 58.998 46.154 0.00 0.00 37.41 4.30
263 264 6.349897 AGATCCTAATATCTACTCCCTCCC 57.650 45.833 0.00 0.00 34.40 4.30
264 265 6.049271 AGATCCTAATATCTACTCCCTCCCT 58.951 44.000 0.00 0.00 34.40 4.20
265 266 6.514719 AGATCCTAATATCTACTCCCTCCCTT 59.485 42.308 0.00 0.00 34.40 3.95
266 267 6.562845 TCCTAATATCTACTCCCTCCCTTT 57.437 41.667 0.00 0.00 0.00 3.11
267 268 6.563163 TCCTAATATCTACTCCCTCCCTTTC 58.437 44.000 0.00 0.00 0.00 2.62
268 269 6.338559 TCCTAATATCTACTCCCTCCCTTTCT 59.661 42.308 0.00 0.00 0.00 2.52
269 270 7.523594 TCCTAATATCTACTCCCTCCCTTTCTA 59.476 40.741 0.00 0.00 0.00 2.10
270 271 8.178132 CCTAATATCTACTCCCTCCCTTTCTAA 58.822 40.741 0.00 0.00 0.00 2.10
271 272 9.603189 CTAATATCTACTCCCTCCCTTTCTAAA 57.397 37.037 0.00 0.00 0.00 1.85
277 278 9.603189 TCTACTCCCTCCCTTTCTAAATATAAG 57.397 37.037 0.00 0.00 0.00 1.73
278 279 9.382307 CTACTCCCTCCCTTTCTAAATATAAGT 57.618 37.037 0.00 0.00 0.00 2.24
279 280 8.265108 ACTCCCTCCCTTTCTAAATATAAGTC 57.735 38.462 0.00 0.00 0.00 3.01
280 281 8.074991 ACTCCCTCCCTTTCTAAATATAAGTCT 58.925 37.037 0.00 0.00 0.00 3.24
281 282 8.871570 TCCCTCCCTTTCTAAATATAAGTCTT 57.128 34.615 0.00 0.00 0.00 3.01
282 283 9.292751 TCCCTCCCTTTCTAAATATAAGTCTTT 57.707 33.333 0.00 0.00 0.00 2.52
283 284 9.922477 CCCTCCCTTTCTAAATATAAGTCTTTT 57.078 33.333 0.00 0.00 0.00 2.27
301 302 9.971922 AAGTCTTTTTAGAGATTCCAACAAATG 57.028 29.630 0.00 0.00 0.00 2.32
302 303 9.354673 AGTCTTTTTAGAGATTCCAACAAATGA 57.645 29.630 0.00 0.00 0.00 2.57
303 304 9.399403 GTCTTTTTAGAGATTCCAACAAATGAC 57.601 33.333 0.00 0.00 0.00 3.06
304 305 9.354673 TCTTTTTAGAGATTCCAACAAATGACT 57.645 29.630 0.00 0.00 0.00 3.41
307 308 9.567776 TTTTAGAGATTCCAACAAATGACTACA 57.432 29.630 0.00 0.00 0.00 2.74
308 309 9.739276 TTTAGAGATTCCAACAAATGACTACAT 57.261 29.630 0.00 0.00 38.50 2.29
310 311 8.723942 AGAGATTCCAACAAATGACTACATAC 57.276 34.615 0.00 0.00 35.50 2.39
311 312 7.492669 AGAGATTCCAACAAATGACTACATACG 59.507 37.037 0.00 0.00 35.50 3.06
312 313 6.538742 AGATTCCAACAAATGACTACATACGG 59.461 38.462 0.00 0.00 35.50 4.02
313 314 5.408880 TCCAACAAATGACTACATACGGA 57.591 39.130 0.00 0.00 35.50 4.69
314 315 5.416083 TCCAACAAATGACTACATACGGAG 58.584 41.667 0.00 0.00 35.50 4.63
315 316 4.034048 CCAACAAATGACTACATACGGAGC 59.966 45.833 0.00 0.00 35.50 4.70
316 317 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
317 318 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
318 319 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
319 320 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
320 321 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
321 322 7.551262 ACAAATGACTACATACGGAGCAAAATA 59.449 33.333 0.00 0.00 35.50 1.40
322 323 8.394877 CAAATGACTACATACGGAGCAAAATAA 58.605 33.333 0.00 0.00 35.50 1.40
323 324 7.715265 ATGACTACATACGGAGCAAAATAAG 57.285 36.000 0.00 0.00 34.71 1.73
324 325 6.636705 TGACTACATACGGAGCAAAATAAGT 58.363 36.000 0.00 0.00 0.00 2.24
325 326 6.533723 TGACTACATACGGAGCAAAATAAGTG 59.466 38.462 0.00 0.00 0.00 3.16
326 327 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
327 328 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
328 329 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
329 330 7.016361 ACATACGGAGCAAAATAAGTGAATC 57.984 36.000 0.00 0.00 0.00 2.52
330 331 6.823689 ACATACGGAGCAAAATAAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
331 332 7.985184 ACATACGGAGCAAAATAAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
332 333 6.663944 ACGGAGCAAAATAAGTGAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
333 334 6.170506 ACGGAGCAAAATAAGTGAATCTACA 58.829 36.000 0.00 0.00 0.00 2.74
334 335 6.092259 ACGGAGCAAAATAAGTGAATCTACAC 59.908 38.462 0.00 0.00 40.60 2.90
354 355 9.967346 TCTACACTCTAAAATATGTCTACATGC 57.033 33.333 5.85 0.00 37.15 4.06
355 356 9.750125 CTACACTCTAAAATATGTCTACATGCA 57.250 33.333 5.85 0.00 37.15 3.96
357 358 9.265901 ACACTCTAAAATATGTCTACATGCATC 57.734 33.333 0.00 0.00 37.15 3.91
358 359 9.486497 CACTCTAAAATATGTCTACATGCATCT 57.514 33.333 0.00 0.00 37.15 2.90
359 360 9.486497 ACTCTAAAATATGTCTACATGCATCTG 57.514 33.333 0.00 0.00 37.15 2.90
360 361 9.486497 CTCTAAAATATGTCTACATGCATCTGT 57.514 33.333 0.00 0.00 37.15 3.41
365 366 9.565090 AAATATGTCTACATGCATCTGTATGTT 57.435 29.630 17.12 4.08 46.66 2.71
369 370 9.866798 ATGTCTACATGCATCTGTATGTTATAG 57.133 33.333 17.12 10.16 46.66 1.31
370 371 8.860088 TGTCTACATGCATCTGTATGTTATAGT 58.140 33.333 17.12 0.00 46.66 2.12
371 372 9.347934 GTCTACATGCATCTGTATGTTATAGTC 57.652 37.037 17.12 5.55 46.66 2.59
372 373 8.523658 TCTACATGCATCTGTATGTTATAGTCC 58.476 37.037 17.12 0.00 46.66 3.85
373 374 7.066307 ACATGCATCTGTATGTTATAGTCCA 57.934 36.000 7.93 0.00 46.66 4.02
374 375 7.683578 ACATGCATCTGTATGTTATAGTCCAT 58.316 34.615 7.93 0.00 46.66 3.41
375 376 8.159447 ACATGCATCTGTATGTTATAGTCCATT 58.841 33.333 7.93 0.00 46.66 3.16
376 377 9.006839 CATGCATCTGTATGTTATAGTCCATTT 57.993 33.333 0.00 0.00 35.38 2.32
377 378 8.382030 TGCATCTGTATGTTATAGTCCATTTG 57.618 34.615 0.00 0.00 35.38 2.32
378 379 8.210265 TGCATCTGTATGTTATAGTCCATTTGA 58.790 33.333 0.00 0.00 35.38 2.69
379 380 9.056005 GCATCTGTATGTTATAGTCCATTTGAA 57.944 33.333 0.00 0.00 35.38 2.69
394 395 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
395 396 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
412 413 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
413 414 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
414 415 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
415 416 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
416 417 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
417 418 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
418 419 7.450944 ACTTATATTTAGGAACGGAGGGAGTAG 59.549 40.741 0.00 0.00 0.00 2.57
419 420 2.449137 TTAGGAACGGAGGGAGTAGG 57.551 55.000 0.00 0.00 0.00 3.18
420 421 1.600058 TAGGAACGGAGGGAGTAGGA 58.400 55.000 0.00 0.00 0.00 2.94
421 422 0.259356 AGGAACGGAGGGAGTAGGAG 59.741 60.000 0.00 0.00 0.00 3.69
422 423 0.258194 GGAACGGAGGGAGTAGGAGA 59.742 60.000 0.00 0.00 0.00 3.71
423 424 1.341778 GGAACGGAGGGAGTAGGAGAA 60.342 57.143 0.00 0.00 0.00 2.87
424 425 2.025898 GAACGGAGGGAGTAGGAGAAG 58.974 57.143 0.00 0.00 0.00 2.85
425 426 1.296984 ACGGAGGGAGTAGGAGAAGA 58.703 55.000 0.00 0.00 0.00 2.87
426 427 1.064537 ACGGAGGGAGTAGGAGAAGAC 60.065 57.143 0.00 0.00 0.00 3.01
427 428 1.213430 CGGAGGGAGTAGGAGAAGACT 59.787 57.143 0.00 0.00 0.00 3.24
428 429 2.747135 CGGAGGGAGTAGGAGAAGACTC 60.747 59.091 0.00 0.00 41.19 3.36
429 430 2.242708 GGAGGGAGTAGGAGAAGACTCA 59.757 54.545 4.57 0.00 43.28 3.41
430 431 3.551846 GAGGGAGTAGGAGAAGACTCAG 58.448 54.545 4.57 0.00 43.28 3.35
431 432 2.923629 AGGGAGTAGGAGAAGACTCAGT 59.076 50.000 4.57 0.00 43.28 3.41
432 433 3.335484 AGGGAGTAGGAGAAGACTCAGTT 59.665 47.826 4.57 0.00 43.28 3.16
433 434 4.090819 GGGAGTAGGAGAAGACTCAGTTT 58.909 47.826 4.57 0.00 43.28 2.66
434 435 5.015391 AGGGAGTAGGAGAAGACTCAGTTTA 59.985 44.000 4.57 0.00 43.28 2.01
435 436 5.894964 GGGAGTAGGAGAAGACTCAGTTTAT 59.105 44.000 4.57 0.00 43.28 1.40
436 437 7.061688 GGGAGTAGGAGAAGACTCAGTTTATA 58.938 42.308 4.57 0.00 43.28 0.98
437 438 7.229907 GGGAGTAGGAGAAGACTCAGTTTATAG 59.770 44.444 4.57 0.00 43.28 1.31
438 439 7.994334 GGAGTAGGAGAAGACTCAGTTTATAGA 59.006 40.741 4.57 0.00 43.28 1.98
439 440 8.741603 AGTAGGAGAAGACTCAGTTTATAGAC 57.258 38.462 0.00 0.00 44.22 2.59
440 441 8.554011 AGTAGGAGAAGACTCAGTTTATAGACT 58.446 37.037 0.00 0.00 44.22 3.24
441 442 7.875327 AGGAGAAGACTCAGTTTATAGACTC 57.125 40.000 0.00 0.00 44.22 3.36
442 443 7.406916 AGGAGAAGACTCAGTTTATAGACTCA 58.593 38.462 0.00 0.00 44.22 3.41
443 444 7.891183 AGGAGAAGACTCAGTTTATAGACTCAA 59.109 37.037 0.00 0.00 44.22 3.02
444 445 7.971722 GGAGAAGACTCAGTTTATAGACTCAAC 59.028 40.741 0.00 0.00 44.22 3.18
445 446 8.410673 AGAAGACTCAGTTTATAGACTCAACA 57.589 34.615 0.00 0.00 0.00 3.33
446 447 9.030452 AGAAGACTCAGTTTATAGACTCAACAT 57.970 33.333 0.00 0.00 0.00 2.71
447 448 9.646427 GAAGACTCAGTTTATAGACTCAACATT 57.354 33.333 0.00 0.00 0.00 2.71
450 451 9.856488 GACTCAGTTTATAGACTCAACATTACA 57.144 33.333 0.00 0.00 0.00 2.41
451 452 9.640963 ACTCAGTTTATAGACTCAACATTACAC 57.359 33.333 0.00 0.00 0.00 2.90
452 453 9.639601 CTCAGTTTATAGACTCAACATTACACA 57.360 33.333 0.00 0.00 0.00 3.72
460 461 7.658179 AGACTCAACATTACACATACACAAG 57.342 36.000 0.00 0.00 0.00 3.16
461 462 7.217200 AGACTCAACATTACACATACACAAGT 58.783 34.615 0.00 0.00 0.00 3.16
462 463 7.171508 AGACTCAACATTACACATACACAAGTG 59.828 37.037 0.00 0.00 41.40 3.16
463 464 6.989759 ACTCAACATTACACATACACAAGTGA 59.010 34.615 7.28 0.00 39.03 3.41
464 465 7.042051 ACTCAACATTACACATACACAAGTGAC 60.042 37.037 7.28 0.00 39.03 3.67
465 466 6.203915 TCAACATTACACATACACAAGTGACC 59.796 38.462 7.28 0.00 39.03 4.02
466 467 4.688879 ACATTACACATACACAAGTGACCG 59.311 41.667 7.28 0.00 39.03 4.79
467 468 2.902705 ACACATACACAAGTGACCGT 57.097 45.000 7.28 0.00 39.03 4.83
468 469 3.188159 ACACATACACAAGTGACCGTT 57.812 42.857 7.28 0.00 39.03 4.44
469 470 3.537580 ACACATACACAAGTGACCGTTT 58.462 40.909 7.28 0.00 39.03 3.60
470 471 4.695396 ACACATACACAAGTGACCGTTTA 58.305 39.130 7.28 0.00 39.03 2.01
471 472 5.117584 ACACATACACAAGTGACCGTTTAA 58.882 37.500 7.28 0.00 39.03 1.52
472 473 5.006941 ACACATACACAAGTGACCGTTTAAC 59.993 40.000 7.28 0.00 39.03 2.01
473 474 5.006844 CACATACACAAGTGACCGTTTAACA 59.993 40.000 7.28 0.00 37.97 2.41
474 475 5.761234 ACATACACAAGTGACCGTTTAACAT 59.239 36.000 7.28 0.00 0.00 2.71
475 476 6.930164 ACATACACAAGTGACCGTTTAACATA 59.070 34.615 7.28 0.00 0.00 2.29
476 477 5.917541 ACACAAGTGACCGTTTAACATAG 57.082 39.130 7.28 0.00 0.00 2.23
477 478 5.362263 ACACAAGTGACCGTTTAACATAGT 58.638 37.500 7.28 0.00 0.00 2.12
478 479 6.514947 ACACAAGTGACCGTTTAACATAGTA 58.485 36.000 7.28 0.00 0.00 1.82
479 480 7.156673 ACACAAGTGACCGTTTAACATAGTAT 58.843 34.615 7.28 0.00 0.00 2.12
480 481 8.306038 ACACAAGTGACCGTTTAACATAGTATA 58.694 33.333 7.28 0.00 0.00 1.47
481 482 8.589629 CACAAGTGACCGTTTAACATAGTATAC 58.410 37.037 0.00 0.00 0.00 1.47
482 483 8.526147 ACAAGTGACCGTTTAACATAGTATACT 58.474 33.333 10.87 10.87 0.00 2.12
483 484 9.362539 CAAGTGACCGTTTAACATAGTATACTT 57.637 33.333 11.40 0.00 0.00 2.24
484 485 9.578439 AAGTGACCGTTTAACATAGTATACTTC 57.422 33.333 11.40 0.00 0.00 3.01
485 486 8.193438 AGTGACCGTTTAACATAGTATACTTCC 58.807 37.037 11.40 0.00 0.00 3.46
486 487 7.975616 GTGACCGTTTAACATAGTATACTTCCA 59.024 37.037 11.40 0.00 0.00 3.53
487 488 8.698210 TGACCGTTTAACATAGTATACTTCCAT 58.302 33.333 11.40 0.00 0.00 3.41
488 489 8.882415 ACCGTTTAACATAGTATACTTCCATG 57.118 34.615 11.40 11.22 0.00 3.66
489 490 7.440255 ACCGTTTAACATAGTATACTTCCATGC 59.560 37.037 11.40 0.00 0.00 4.06
490 491 7.095355 CCGTTTAACATAGTATACTTCCATGCC 60.095 40.741 11.40 0.00 0.00 4.40
491 492 7.439955 CGTTTAACATAGTATACTTCCATGCCA 59.560 37.037 11.40 0.00 0.00 4.92
492 493 9.284968 GTTTAACATAGTATACTTCCATGCCAT 57.715 33.333 11.40 2.59 0.00 4.40
493 494 8.846943 TTAACATAGTATACTTCCATGCCATG 57.153 34.615 11.40 8.40 0.00 3.66
494 495 6.439636 ACATAGTATACTTCCATGCCATGT 57.560 37.500 11.40 9.03 0.00 3.21
495 496 6.233434 ACATAGTATACTTCCATGCCATGTG 58.767 40.000 11.40 0.00 0.00 3.21
496 497 4.090761 AGTATACTTCCATGCCATGTGG 57.909 45.455 3.63 0.00 38.11 4.17
536 537 3.855255 TGTGTTGAACTGATTCCCTCA 57.145 42.857 0.00 0.00 33.49 3.86
540 541 3.394274 TGTTGAACTGATTCCCTCAAGGA 59.606 43.478 0.00 0.00 45.68 3.36
606 608 1.445410 CACGACGATCGCCCTTTCA 60.445 57.895 16.60 0.00 45.12 2.69
608 610 0.527817 ACGACGATCGCCCTTTCATC 60.528 55.000 16.60 1.22 45.12 2.92
633 647 7.931948 TCTCATCGGACGATCTATTAGCATATA 59.068 37.037 3.94 0.00 31.62 0.86
635 649 6.862711 TCGGACGATCTATTAGCATATAGG 57.137 41.667 0.00 0.00 0.00 2.57
637 651 6.706716 TCGGACGATCTATTAGCATATAGGAG 59.293 42.308 0.00 1.78 0.00 3.69
638 652 6.483974 CGGACGATCTATTAGCATATAGGAGT 59.516 42.308 0.00 4.14 0.00 3.85
639 653 7.656542 CGGACGATCTATTAGCATATAGGAGTA 59.343 40.741 0.00 0.00 0.00 2.59
640 654 9.509956 GGACGATCTATTAGCATATAGGAGTAT 57.490 37.037 0.00 0.00 0.00 2.12
667 681 2.629051 AGTGCTACGAATAAAGTGGGC 58.371 47.619 0.00 0.00 0.00 5.36
682 696 2.047179 GGCGTCCAGGTTCACTCC 60.047 66.667 0.00 0.00 0.00 3.85
683 697 2.432628 GCGTCCAGGTTCACTCCG 60.433 66.667 0.00 0.00 0.00 4.63
687 701 0.319641 GTCCAGGTTCACTCCGTGTC 60.320 60.000 0.00 0.00 34.79 3.67
690 704 0.946221 CAGGTTCACTCCGTGTCTGC 60.946 60.000 0.00 0.00 34.79 4.26
691 705 1.668151 GGTTCACTCCGTGTCTGCC 60.668 63.158 0.00 0.00 34.79 4.85
692 706 1.367840 GTTCACTCCGTGTCTGCCT 59.632 57.895 0.00 0.00 34.79 4.75
693 707 0.946221 GTTCACTCCGTGTCTGCCTG 60.946 60.000 0.00 0.00 34.79 4.85
694 708 2.715532 TTCACTCCGTGTCTGCCTGC 62.716 60.000 0.00 0.00 34.79 4.85
695 709 2.919856 ACTCCGTGTCTGCCTGCT 60.920 61.111 0.00 0.00 0.00 4.24
696 710 2.345244 CTCCGTGTCTGCCTGCTT 59.655 61.111 0.00 0.00 0.00 3.91
697 711 2.031012 TCCGTGTCTGCCTGCTTG 59.969 61.111 0.00 0.00 0.00 4.01
698 712 2.031012 CCGTGTCTGCCTGCTTGA 59.969 61.111 0.00 0.00 0.00 3.02
699 713 1.597854 CCGTGTCTGCCTGCTTGAA 60.598 57.895 0.00 0.00 0.00 2.69
700 714 1.572085 CCGTGTCTGCCTGCTTGAAG 61.572 60.000 0.00 0.00 0.00 3.02
704 718 0.888285 GTCTGCCTGCTTGAAGCTGT 60.888 55.000 18.94 0.00 42.97 4.40
705 719 0.686789 TCTGCCTGCTTGAAGCTGTA 59.313 50.000 18.94 8.15 42.97 2.74
709 723 1.367659 CCTGCTTGAAGCTGTAGAGC 58.632 55.000 18.94 3.08 46.64 4.09
730 744 0.318762 GAGCTGAGAAGGTTCGGTGT 59.681 55.000 0.00 0.00 0.00 4.16
743 757 2.455674 TCGGTGTCAGATTGGAGTTG 57.544 50.000 0.00 0.00 0.00 3.16
763 784 1.069358 GAGTCATGGGAAGGATCGACC 59.931 57.143 0.00 0.00 39.35 4.79
770 791 1.835531 GGGAAGGATCGACCCAAGTTA 59.164 52.381 0.00 0.00 42.81 2.24
803 824 0.249322 ACCTGAACACCAAGTCGTCG 60.249 55.000 0.00 0.00 0.00 5.12
812 833 2.355481 AAGTCGTCGTCGTTGCCC 60.355 61.111 1.33 0.00 38.33 5.36
846 873 7.922505 ATAAATCTCTTCTTCGTCTTCATCG 57.077 36.000 0.00 0.00 0.00 3.84
858 885 4.214332 TCGTCTTCATCGTCTCCATATCAG 59.786 45.833 0.00 0.00 0.00 2.90
860 887 5.457140 GTCTTCATCGTCTCCATATCAGAC 58.543 45.833 2.32 2.32 37.51 3.51
869 896 5.080337 GTCTCCATATCAGACCATCCTACA 58.920 45.833 1.20 0.00 35.19 2.74
883 912 1.493022 TCCTACAGGCCTCTCTCTCTC 59.507 57.143 0.00 0.00 34.44 3.20
887 916 0.032217 CAGGCCTCTCTCTCTCCCTT 60.032 60.000 0.00 0.00 0.00 3.95
912 991 3.627123 TGTCTCACACACACATTCCAAAG 59.373 43.478 0.00 0.00 0.00 2.77
953 1033 1.544825 CCACACCACCGATCAGGAGT 61.545 60.000 10.05 2.49 45.00 3.85
954 1034 0.321671 CACACCACCGATCAGGAGTT 59.678 55.000 10.05 0.00 45.00 3.01
960 1040 2.028112 CCACCGATCAGGAGTTGAAGAA 60.028 50.000 10.05 0.00 45.00 2.52
1485 1586 0.252239 GGGAAATGGGCCAGGAACTT 60.252 55.000 13.78 0.00 34.60 2.66
1608 1710 3.717294 CTGTTCCGGTCCCAGGGG 61.717 72.222 5.33 0.92 0.00 4.79
1620 1722 0.767375 CCCAGGGGATCATCGTCAAT 59.233 55.000 0.00 0.00 37.50 2.57
1742 1844 0.041238 ATCAAGTCGGAGGAGGTGGA 59.959 55.000 0.00 0.00 0.00 4.02
2080 2188 2.525055 CGGTTGGTTGTTTTGTGACAG 58.475 47.619 0.00 0.00 0.00 3.51
2091 2199 1.199615 TTGTGACAGACTGTGGGTGA 58.800 50.000 14.14 0.00 0.00 4.02
2106 2214 1.540363 GGGTGAAACTCAGTGCTCGAA 60.540 52.381 0.00 0.00 37.19 3.71
2140 2248 1.740296 GTGCCGATGTTAGCGTGGT 60.740 57.895 0.00 0.00 0.00 4.16
2214 2322 2.577059 GCCGTCACGATGGAAGGA 59.423 61.111 9.55 0.00 38.53 3.36
2282 2396 0.395173 TGGATGATGGACTCCGACGA 60.395 55.000 0.00 0.00 34.05 4.20
2292 2406 2.441532 TCCGACGATGGGAGGGTC 60.442 66.667 0.00 0.00 0.00 4.46
2344 2458 0.818296 GGCGAAAGAGGCTCTACTCA 59.182 55.000 19.07 0.00 39.97 3.41
2362 2476 1.203428 TCAAGGGTGGGGAATCAGAGA 60.203 52.381 0.00 0.00 0.00 3.10
2454 2584 3.150895 GCAGTGAGCGTGAAGTCG 58.849 61.111 0.00 0.00 0.00 4.18
2471 2601 5.174398 TGAAGTCGACGTGTGATTTTAGTTC 59.826 40.000 9.23 3.66 0.00 3.01
2483 2620 8.925700 GTGTGATTTTAGTTCCATCATTTTTCC 58.074 33.333 0.00 0.00 29.78 3.13
2494 2631 6.514947 TCCATCATTTTTCCTTTGACTTGTG 58.485 36.000 0.00 0.00 0.00 3.33
2502 2639 5.930837 TTCCTTTGACTTGTGGTTTCATT 57.069 34.783 0.00 0.00 0.00 2.57
2597 2741 1.081892 CGGAGGCACAAGACAATCAG 58.918 55.000 0.00 0.00 0.00 2.90
2605 2749 3.004106 GCACAAGACAATCAGAACTTGCT 59.996 43.478 0.00 0.00 42.00 3.91
2757 2918 0.104120 CCTCACGTTGTCCACTCACA 59.896 55.000 0.00 0.00 0.00 3.58
2853 3018 3.404773 GGAAGACTCCCCACCTGG 58.595 66.667 0.00 0.00 35.42 4.45
2855 3020 0.621862 GGAAGACTCCCCACCTGGAT 60.622 60.000 0.00 0.00 35.42 3.41
2884 3049 3.326836 AAAGAGGCAGTAACTCAGAGC 57.673 47.619 0.00 0.00 37.43 4.09
2891 3056 4.223923 AGGCAGTAACTCAGAGCTTTACAT 59.776 41.667 11.61 0.00 0.00 2.29
2895 3060 7.254590 GGCAGTAACTCAGAGCTTTACATATTG 60.255 40.741 11.61 4.60 0.00 1.90
2919 3084 3.876320 GAGAAGAGAGGAAATCATGCCAC 59.124 47.826 0.00 0.00 0.00 5.01
2920 3085 2.725221 AGAGAGGAAATCATGCCACC 57.275 50.000 0.00 0.00 0.00 4.61
2923 3088 1.017387 GAGGAAATCATGCCACCGAC 58.983 55.000 0.00 0.00 0.00 4.79
2939 3104 3.392595 GACCGGCGTGTCCTCGTAG 62.393 68.421 14.89 0.00 0.00 3.51
2946 3111 1.154197 CGTGTCCTCGTAGTGTCTCA 58.846 55.000 0.00 0.00 0.00 3.27
2947 3112 1.128878 CGTGTCCTCGTAGTGTCTCAG 59.871 57.143 0.00 0.00 0.00 3.35
3051 3217 4.263905 ACACTTTCTTATTCCTGGCATCCA 60.264 41.667 0.00 0.00 0.00 3.41
3052 3218 4.706476 CACTTTCTTATTCCTGGCATCCAA 59.294 41.667 0.00 0.00 30.80 3.53
3074 3240 5.397142 AAATCTTCCACAAAATGAGGAGC 57.603 39.130 0.00 0.00 38.34 4.70
3079 3245 1.068055 CCACAAAATGAGGAGCAGCAC 60.068 52.381 0.00 0.00 28.90 4.40
3083 3249 3.243636 ACAAAATGAGGAGCAGCACAAAG 60.244 43.478 0.00 0.00 0.00 2.77
3088 3254 3.741476 GAGCAGCACAAAGGGCCG 61.741 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.811902 TAGTACCGATTCGTGTCACG 57.188 50.000 19.38 19.38 44.19 4.35
3 4 3.855950 CCTTTAGTACCGATTCGTGTCAC 59.144 47.826 5.20 0.00 0.00 3.67
4 5 3.507233 ACCTTTAGTACCGATTCGTGTCA 59.493 43.478 5.20 0.00 0.00 3.58
5 6 4.102035 ACCTTTAGTACCGATTCGTGTC 57.898 45.455 5.20 0.00 0.00 3.67
6 7 4.240096 CAACCTTTAGTACCGATTCGTGT 58.760 43.478 5.20 5.49 0.00 4.49
7 8 3.061697 GCAACCTTTAGTACCGATTCGTG 59.938 47.826 5.20 0.00 0.00 4.35
8 9 3.056322 AGCAACCTTTAGTACCGATTCGT 60.056 43.478 5.20 0.00 0.00 3.85
9 10 3.518590 AGCAACCTTTAGTACCGATTCG 58.481 45.455 0.00 0.00 0.00 3.34
10 11 4.329256 GTGAGCAACCTTTAGTACCGATTC 59.671 45.833 0.00 0.00 0.00 2.52
11 12 4.251268 GTGAGCAACCTTTAGTACCGATT 58.749 43.478 0.00 0.00 0.00 3.34
12 13 3.675228 CGTGAGCAACCTTTAGTACCGAT 60.675 47.826 0.00 0.00 0.00 4.18
13 14 2.352030 CGTGAGCAACCTTTAGTACCGA 60.352 50.000 0.00 0.00 0.00 4.69
14 15 1.990563 CGTGAGCAACCTTTAGTACCG 59.009 52.381 0.00 0.00 0.00 4.02
15 16 3.308438 TCGTGAGCAACCTTTAGTACC 57.692 47.619 0.00 0.00 0.00 3.34
16 17 3.431233 GGTTCGTGAGCAACCTTTAGTAC 59.569 47.826 0.00 0.00 37.89 2.73
17 18 3.656559 GGTTCGTGAGCAACCTTTAGTA 58.343 45.455 0.00 0.00 37.89 1.82
18 19 2.490991 GGTTCGTGAGCAACCTTTAGT 58.509 47.619 0.00 0.00 37.89 2.24
19 20 1.459592 CGGTTCGTGAGCAACCTTTAG 59.540 52.381 1.86 0.00 38.38 1.85
20 21 1.504359 CGGTTCGTGAGCAACCTTTA 58.496 50.000 1.86 0.00 38.38 1.85
21 22 1.164041 CCGGTTCGTGAGCAACCTTT 61.164 55.000 0.00 0.00 38.38 3.11
22 23 1.597027 CCGGTTCGTGAGCAACCTT 60.597 57.895 0.00 0.00 38.38 3.50
23 24 1.466025 TACCGGTTCGTGAGCAACCT 61.466 55.000 15.04 0.00 38.38 3.50
24 25 1.005867 TACCGGTTCGTGAGCAACC 60.006 57.895 15.04 0.00 37.69 3.77
25 26 0.319297 AGTACCGGTTCGTGAGCAAC 60.319 55.000 15.04 0.15 0.00 4.17
26 27 1.246649 TAGTACCGGTTCGTGAGCAA 58.753 50.000 15.04 0.00 0.00 3.91
27 28 1.246649 TTAGTACCGGTTCGTGAGCA 58.753 50.000 15.04 0.00 0.00 4.26
28 29 2.159338 TCATTAGTACCGGTTCGTGAGC 60.159 50.000 15.04 0.00 0.00 4.26
29 30 3.770263 TCATTAGTACCGGTTCGTGAG 57.230 47.619 15.04 1.13 0.00 3.51
30 31 3.949754 AGATCATTAGTACCGGTTCGTGA 59.050 43.478 15.04 15.20 0.00 4.35
31 32 4.288531 GAGATCATTAGTACCGGTTCGTG 58.711 47.826 15.04 10.08 0.00 4.35
32 33 3.317430 GGAGATCATTAGTACCGGTTCGT 59.683 47.826 15.04 0.00 0.00 3.85
33 34 3.608707 CGGAGATCATTAGTACCGGTTCG 60.609 52.174 15.04 0.00 37.28 3.95
34 35 3.856267 GCGGAGATCATTAGTACCGGTTC 60.856 52.174 15.04 8.12 40.55 3.62
35 36 2.035576 GCGGAGATCATTAGTACCGGTT 59.964 50.000 15.04 0.00 40.55 4.44
36 37 1.612463 GCGGAGATCATTAGTACCGGT 59.388 52.381 13.98 13.98 40.55 5.28
37 38 1.067776 GGCGGAGATCATTAGTACCGG 60.068 57.143 0.00 0.00 40.55 5.28
38 39 1.067776 GGGCGGAGATCATTAGTACCG 60.068 57.143 0.00 0.00 42.63 4.02
39 40 1.067776 CGGGCGGAGATCATTAGTACC 60.068 57.143 0.00 0.00 0.00 3.34
40 41 1.669211 GCGGGCGGAGATCATTAGTAC 60.669 57.143 0.00 0.00 0.00 2.73
41 42 0.601558 GCGGGCGGAGATCATTAGTA 59.398 55.000 0.00 0.00 0.00 1.82
42 43 1.367840 GCGGGCGGAGATCATTAGT 59.632 57.895 0.00 0.00 0.00 2.24
43 44 1.374758 GGCGGGCGGAGATCATTAG 60.375 63.158 0.00 0.00 0.00 1.73
44 45 0.541063 TAGGCGGGCGGAGATCATTA 60.541 55.000 0.00 0.00 0.00 1.90
45 46 1.821061 CTAGGCGGGCGGAGATCATT 61.821 60.000 0.00 0.00 0.00 2.57
46 47 2.203640 TAGGCGGGCGGAGATCAT 60.204 61.111 0.00 0.00 0.00 2.45
47 48 2.912542 CTAGGCGGGCGGAGATCA 60.913 66.667 0.00 0.00 0.00 2.92
48 49 4.365505 GCTAGGCGGGCGGAGATC 62.366 72.222 10.05 0.00 0.00 2.75
56 57 4.090588 TTCCAACGGCTAGGCGGG 62.091 66.667 37.39 29.67 33.14 6.13
57 58 2.818274 GTTCCAACGGCTAGGCGG 60.818 66.667 37.39 22.89 35.02 6.13
58 59 2.818274 GGTTCCAACGGCTAGGCG 60.818 66.667 34.16 34.16 0.00 5.52
59 60 2.818274 CGGTTCCAACGGCTAGGC 60.818 66.667 6.15 6.15 0.00 3.93
60 61 1.447314 GTCGGTTCCAACGGCTAGG 60.447 63.158 0.00 0.00 32.37 3.02
61 62 1.012486 GTGTCGGTTCCAACGGCTAG 61.012 60.000 0.00 0.00 36.79 3.42
62 63 1.005867 GTGTCGGTTCCAACGGCTA 60.006 57.895 0.00 0.00 36.79 3.93
63 64 1.466025 TAGTGTCGGTTCCAACGGCT 61.466 55.000 0.00 0.00 36.79 5.52
64 65 0.600782 TTAGTGTCGGTTCCAACGGC 60.601 55.000 0.00 0.00 36.31 5.68
65 66 1.730064 CATTAGTGTCGGTTCCAACGG 59.270 52.381 0.00 0.00 0.00 4.44
66 67 1.730064 CCATTAGTGTCGGTTCCAACG 59.270 52.381 0.00 0.00 0.00 4.10
67 68 2.740447 GTCCATTAGTGTCGGTTCCAAC 59.260 50.000 0.00 0.00 0.00 3.77
68 69 2.369203 TGTCCATTAGTGTCGGTTCCAA 59.631 45.455 0.00 0.00 0.00 3.53
69 70 1.972075 TGTCCATTAGTGTCGGTTCCA 59.028 47.619 0.00 0.00 0.00 3.53
70 71 2.289195 TGTGTCCATTAGTGTCGGTTCC 60.289 50.000 0.00 0.00 0.00 3.62
71 72 3.034721 TGTGTCCATTAGTGTCGGTTC 57.965 47.619 0.00 0.00 0.00 3.62
72 73 3.695830 ATGTGTCCATTAGTGTCGGTT 57.304 42.857 0.00 0.00 0.00 4.44
73 74 3.695830 AATGTGTCCATTAGTGTCGGT 57.304 42.857 0.00 0.00 39.52 4.69
81 82 2.912771 CCGGCACTAATGTGTCCATTA 58.087 47.619 0.00 0.00 45.29 1.90
82 83 1.750193 CCGGCACTAATGTGTCCATT 58.250 50.000 0.00 0.00 45.29 3.16
83 84 0.748005 GCCGGCACTAATGTGTCCAT 60.748 55.000 24.80 0.00 45.29 3.41
84 85 1.376683 GCCGGCACTAATGTGTCCA 60.377 57.895 24.80 0.00 45.29 4.02
85 86 1.078426 AGCCGGCACTAATGTGTCC 60.078 57.895 31.54 0.00 45.29 4.02
86 87 0.391130 TGAGCCGGCACTAATGTGTC 60.391 55.000 31.54 14.56 45.44 3.67
87 88 0.036164 TTGAGCCGGCACTAATGTGT 59.964 50.000 31.54 3.33 45.44 3.72
88 89 1.164411 TTTGAGCCGGCACTAATGTG 58.836 50.000 31.54 0.00 46.37 3.21
89 90 1.904287 TTTTGAGCCGGCACTAATGT 58.096 45.000 31.54 5.22 0.00 2.71
90 91 2.423185 TGATTTTGAGCCGGCACTAATG 59.577 45.455 31.54 0.00 0.00 1.90
91 92 2.722094 TGATTTTGAGCCGGCACTAAT 58.278 42.857 31.54 23.77 0.00 1.73
92 93 2.192664 TGATTTTGAGCCGGCACTAA 57.807 45.000 31.54 22.93 0.00 2.24
93 94 2.192664 TTGATTTTGAGCCGGCACTA 57.807 45.000 31.54 17.63 0.00 2.74
94 95 1.000274 GTTTGATTTTGAGCCGGCACT 60.000 47.619 31.54 9.09 0.00 4.40
95 96 1.418373 GTTTGATTTTGAGCCGGCAC 58.582 50.000 31.54 24.60 0.00 5.01
96 97 0.316841 GGTTTGATTTTGAGCCGGCA 59.683 50.000 31.54 7.75 0.00 5.69
97 98 0.732538 CGGTTTGATTTTGAGCCGGC 60.733 55.000 21.89 21.89 36.05 6.13
98 99 3.399879 CGGTTTGATTTTGAGCCGG 57.600 52.632 0.00 0.00 36.05 6.13
99 100 0.732538 GCCGGTTTGATTTTGAGCCG 60.733 55.000 1.90 0.00 38.99 5.52
100 101 0.316841 TGCCGGTTTGATTTTGAGCC 59.683 50.000 1.90 0.00 0.00 4.70
101 102 1.000274 AGTGCCGGTTTGATTTTGAGC 60.000 47.619 1.90 0.00 0.00 4.26
102 103 4.497473 TTAGTGCCGGTTTGATTTTGAG 57.503 40.909 1.90 0.00 0.00 3.02
103 104 4.279671 ACATTAGTGCCGGTTTGATTTTGA 59.720 37.500 1.90 0.00 0.00 2.69
104 105 4.385447 CACATTAGTGCCGGTTTGATTTTG 59.615 41.667 1.90 0.00 39.21 2.44
105 106 4.555262 CACATTAGTGCCGGTTTGATTTT 58.445 39.130 1.90 0.00 39.21 1.82
106 107 4.173036 CACATTAGTGCCGGTTTGATTT 57.827 40.909 1.90 0.00 39.21 2.17
107 108 3.848272 CACATTAGTGCCGGTTTGATT 57.152 42.857 1.90 0.00 39.21 2.57
125 126 3.733443 AAAGGGTCAAATGTGAAGCAC 57.267 42.857 0.00 0.00 34.87 4.40
126 127 4.405358 AGAAAAAGGGTCAAATGTGAAGCA 59.595 37.500 0.00 0.00 34.87 3.91
127 128 4.948847 AGAAAAAGGGTCAAATGTGAAGC 58.051 39.130 0.00 0.00 34.87 3.86
128 129 7.277174 AGTAGAAAAAGGGTCAAATGTGAAG 57.723 36.000 0.00 0.00 34.87 3.02
129 130 7.996644 ACTAGTAGAAAAAGGGTCAAATGTGAA 59.003 33.333 3.59 0.00 34.87 3.18
130 131 7.444183 CACTAGTAGAAAAAGGGTCAAATGTGA 59.556 37.037 3.59 0.00 0.00 3.58
131 132 7.444183 TCACTAGTAGAAAAAGGGTCAAATGTG 59.556 37.037 3.59 0.00 0.00 3.21
132 133 7.514721 TCACTAGTAGAAAAAGGGTCAAATGT 58.485 34.615 3.59 0.00 0.00 2.71
133 134 7.878127 TCTCACTAGTAGAAAAAGGGTCAAATG 59.122 37.037 3.59 0.00 0.00 2.32
134 135 7.974504 TCTCACTAGTAGAAAAAGGGTCAAAT 58.025 34.615 3.59 0.00 0.00 2.32
135 136 7.070821 ACTCTCACTAGTAGAAAAAGGGTCAAA 59.929 37.037 3.59 0.00 0.00 2.69
136 137 6.553852 ACTCTCACTAGTAGAAAAAGGGTCAA 59.446 38.462 3.59 0.00 0.00 3.18
137 138 6.075984 ACTCTCACTAGTAGAAAAAGGGTCA 58.924 40.000 3.59 0.00 0.00 4.02
138 139 6.593268 ACTCTCACTAGTAGAAAAAGGGTC 57.407 41.667 3.59 0.00 0.00 4.46
139 140 6.997942 AACTCTCACTAGTAGAAAAAGGGT 57.002 37.500 3.59 0.00 0.00 4.34
140 141 7.893658 TGTAACTCTCACTAGTAGAAAAAGGG 58.106 38.462 3.59 0.00 0.00 3.95
141 142 9.930693 ATTGTAACTCTCACTAGTAGAAAAAGG 57.069 33.333 3.59 0.00 0.00 3.11
146 147 9.511272 TGTACATTGTAACTCTCACTAGTAGAA 57.489 33.333 3.59 0.00 0.00 2.10
147 148 9.682465 ATGTACATTGTAACTCTCACTAGTAGA 57.318 33.333 1.41 0.00 0.00 2.59
150 151 9.239551 TGTATGTACATTGTAACTCTCACTAGT 57.760 33.333 14.77 0.00 0.00 2.57
158 159 9.649167 GGGGTATATGTATGTACATTGTAACTC 57.351 37.037 14.77 5.52 43.99 3.01
159 160 8.308931 CGGGGTATATGTATGTACATTGTAACT 58.691 37.037 14.77 0.00 43.99 2.24
160 161 7.063780 GCGGGGTATATGTATGTACATTGTAAC 59.936 40.741 14.77 6.61 43.99 2.50
161 162 7.098477 GCGGGGTATATGTATGTACATTGTAA 58.902 38.462 14.77 0.00 43.99 2.41
162 163 6.210984 TGCGGGGTATATGTATGTACATTGTA 59.789 38.462 14.77 5.44 43.99 2.41
163 164 5.012251 TGCGGGGTATATGTATGTACATTGT 59.988 40.000 14.77 3.28 43.99 2.71
164 165 5.483811 TGCGGGGTATATGTATGTACATTG 58.516 41.667 14.77 0.00 43.99 2.82
165 166 5.338056 CCTGCGGGGTATATGTATGTACATT 60.338 44.000 14.77 0.00 43.99 2.71
167 168 3.512329 CCTGCGGGGTATATGTATGTACA 59.488 47.826 2.57 0.00 40.98 2.90
168 169 4.119442 CCTGCGGGGTATATGTATGTAC 57.881 50.000 2.57 0.00 0.00 2.90
182 183 3.382803 CTTGCTCTCTCCCTGCGGG 62.383 68.421 3.88 3.88 46.11 6.13
183 184 2.186384 CTTGCTCTCTCCCTGCGG 59.814 66.667 0.00 0.00 0.00 5.69
184 185 2.511145 GCTTGCTCTCTCCCTGCG 60.511 66.667 0.00 0.00 0.00 5.18
185 186 2.511145 CGCTTGCTCTCTCCCTGC 60.511 66.667 0.00 0.00 0.00 4.85
186 187 2.511145 GCGCTTGCTCTCTCCCTG 60.511 66.667 0.00 0.00 35.07 4.45
196 197 0.593128 TCTTTTCCAGAAGCGCTTGC 59.407 50.000 30.47 18.58 39.58 4.01
197 198 1.198637 CCTCTTTTCCAGAAGCGCTTG 59.801 52.381 30.47 15.48 0.00 4.01
198 199 1.528129 CCTCTTTTCCAGAAGCGCTT 58.472 50.000 25.35 25.35 0.00 4.68
199 200 0.957888 GCCTCTTTTCCAGAAGCGCT 60.958 55.000 2.64 2.64 29.02 5.92
200 201 1.237285 TGCCTCTTTTCCAGAAGCGC 61.237 55.000 0.00 0.00 41.42 5.92
201 202 0.519077 GTGCCTCTTTTCCAGAAGCG 59.481 55.000 0.00 0.00 41.42 4.68
202 203 0.519077 CGTGCCTCTTTTCCAGAAGC 59.481 55.000 0.00 0.00 39.22 3.86
203 204 0.519077 GCGTGCCTCTTTTCCAGAAG 59.481 55.000 0.00 0.00 0.00 2.85
204 205 0.108585 AGCGTGCCTCTTTTCCAGAA 59.891 50.000 0.00 0.00 0.00 3.02
205 206 0.603707 CAGCGTGCCTCTTTTCCAGA 60.604 55.000 0.00 0.00 0.00 3.86
206 207 1.580845 CCAGCGTGCCTCTTTTCCAG 61.581 60.000 0.00 0.00 0.00 3.86
207 208 1.600636 CCAGCGTGCCTCTTTTCCA 60.601 57.895 0.00 0.00 0.00 3.53
208 209 2.982744 GCCAGCGTGCCTCTTTTCC 61.983 63.158 0.00 0.00 0.00 3.13
209 210 2.563427 GCCAGCGTGCCTCTTTTC 59.437 61.111 0.00 0.00 0.00 2.29
222 223 1.915614 CTAGCAACGCTTGTGGCCAG 61.916 60.000 5.11 0.00 44.10 4.85
223 224 1.965930 CTAGCAACGCTTGTGGCCA 60.966 57.895 0.00 0.00 44.10 5.36
224 225 1.026718 ATCTAGCAACGCTTGTGGCC 61.027 55.000 0.00 0.00 44.10 5.36
225 226 0.375106 GATCTAGCAACGCTTGTGGC 59.625 55.000 0.00 0.00 43.31 5.01
226 227 1.009829 GGATCTAGCAACGCTTGTGG 58.990 55.000 0.00 0.00 40.44 4.17
227 228 2.015736 AGGATCTAGCAACGCTTGTG 57.984 50.000 0.00 0.00 40.44 3.33
228 229 3.887621 TTAGGATCTAGCAACGCTTGT 57.112 42.857 0.00 0.00 40.44 3.16
229 230 6.393990 AGATATTAGGATCTAGCAACGCTTG 58.606 40.000 0.00 0.00 40.44 4.01
230 231 6.597832 AGATATTAGGATCTAGCAACGCTT 57.402 37.500 0.00 0.00 40.44 4.68
231 232 6.887545 AGTAGATATTAGGATCTAGCAACGCT 59.112 38.462 0.00 0.00 38.75 5.07
232 233 7.090953 AGTAGATATTAGGATCTAGCAACGC 57.909 40.000 0.00 0.00 38.75 4.84
233 234 7.201750 GGGAGTAGATATTAGGATCTAGCAACG 60.202 44.444 0.00 0.00 38.75 4.10
234 235 7.837187 AGGGAGTAGATATTAGGATCTAGCAAC 59.163 40.741 0.00 0.00 38.75 4.17
235 236 7.945278 AGGGAGTAGATATTAGGATCTAGCAA 58.055 38.462 0.00 0.00 38.75 3.91
236 237 7.367004 GGAGGGAGTAGATATTAGGATCTAGCA 60.367 44.444 0.00 0.00 38.75 3.49
237 238 7.002276 GGAGGGAGTAGATATTAGGATCTAGC 58.998 46.154 0.00 0.00 38.75 3.42
238 239 7.352522 AGGGAGGGAGTAGATATTAGGATCTAG 59.647 44.444 0.00 0.00 38.75 2.43
239 240 7.214996 AGGGAGGGAGTAGATATTAGGATCTA 58.785 42.308 0.00 0.00 37.38 1.98
240 241 6.049271 AGGGAGGGAGTAGATATTAGGATCT 58.951 44.000 0.00 0.00 39.54 2.75
241 242 6.349897 AGGGAGGGAGTAGATATTAGGATC 57.650 45.833 0.00 0.00 0.00 3.36
242 243 6.761424 AAGGGAGGGAGTAGATATTAGGAT 57.239 41.667 0.00 0.00 0.00 3.24
243 244 6.338559 AGAAAGGGAGGGAGTAGATATTAGGA 59.661 42.308 0.00 0.00 0.00 2.94
244 245 6.566914 AGAAAGGGAGGGAGTAGATATTAGG 58.433 44.000 0.00 0.00 0.00 2.69
245 246 9.603189 TTTAGAAAGGGAGGGAGTAGATATTAG 57.397 37.037 0.00 0.00 0.00 1.73
251 252 9.603189 CTTATATTTAGAAAGGGAGGGAGTAGA 57.397 37.037 0.00 0.00 0.00 2.59
252 253 9.382307 ACTTATATTTAGAAAGGGAGGGAGTAG 57.618 37.037 0.00 0.00 0.00 2.57
253 254 9.377238 GACTTATATTTAGAAAGGGAGGGAGTA 57.623 37.037 0.00 0.00 0.00 2.59
254 255 8.074991 AGACTTATATTTAGAAAGGGAGGGAGT 58.925 37.037 0.00 0.00 0.00 3.85
255 256 8.499288 AGACTTATATTTAGAAAGGGAGGGAG 57.501 38.462 0.00 0.00 0.00 4.30
256 257 8.871570 AAGACTTATATTTAGAAAGGGAGGGA 57.128 34.615 0.00 0.00 0.00 4.20
257 258 9.922477 AAAAGACTTATATTTAGAAAGGGAGGG 57.078 33.333 0.00 0.00 0.00 4.30
275 276 9.971922 CATTTGTTGGAATCTCTAAAAAGACTT 57.028 29.630 0.00 0.00 0.00 3.01
276 277 9.354673 TCATTTGTTGGAATCTCTAAAAAGACT 57.645 29.630 0.00 0.00 0.00 3.24
277 278 9.399403 GTCATTTGTTGGAATCTCTAAAAAGAC 57.601 33.333 0.00 0.00 0.00 3.01
278 279 9.354673 AGTCATTTGTTGGAATCTCTAAAAAGA 57.645 29.630 0.00 0.00 0.00 2.52
281 282 9.567776 TGTAGTCATTTGTTGGAATCTCTAAAA 57.432 29.630 0.00 0.00 0.00 1.52
282 283 9.739276 ATGTAGTCATTTGTTGGAATCTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
284 285 9.817809 GTATGTAGTCATTTGTTGGAATCTCTA 57.182 33.333 0.00 0.00 35.70 2.43
285 286 7.492669 CGTATGTAGTCATTTGTTGGAATCTCT 59.507 37.037 0.00 0.00 35.70 3.10
286 287 7.254455 CCGTATGTAGTCATTTGTTGGAATCTC 60.254 40.741 0.00 0.00 35.70 2.75
287 288 6.538742 CCGTATGTAGTCATTTGTTGGAATCT 59.461 38.462 0.00 0.00 35.70 2.40
288 289 6.537301 TCCGTATGTAGTCATTTGTTGGAATC 59.463 38.462 0.00 0.00 35.70 2.52
289 290 6.411376 TCCGTATGTAGTCATTTGTTGGAAT 58.589 36.000 0.00 0.00 35.70 3.01
290 291 5.795972 TCCGTATGTAGTCATTTGTTGGAA 58.204 37.500 0.00 0.00 35.70 3.53
291 292 5.408880 TCCGTATGTAGTCATTTGTTGGA 57.591 39.130 0.00 0.00 35.70 3.53
292 293 4.034048 GCTCCGTATGTAGTCATTTGTTGG 59.966 45.833 0.00 0.00 35.70 3.77
293 294 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
294 295 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
295 296 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
296 297 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
297 298 8.500753 TTATTTTGCTCCGTATGTAGTCATTT 57.499 30.769 0.00 0.00 35.70 2.32
298 299 7.769044 ACTTATTTTGCTCCGTATGTAGTCATT 59.231 33.333 0.00 0.00 35.70 2.57
299 300 7.224753 CACTTATTTTGCTCCGTATGTAGTCAT 59.775 37.037 0.00 0.00 38.00 3.06
300 301 6.533723 CACTTATTTTGCTCCGTATGTAGTCA 59.466 38.462 0.00 0.00 0.00 3.41
301 302 6.755141 TCACTTATTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
302 303 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
303 304 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
304 305 7.985184 AGATTCACTTATTTTGCTCCGTATGTA 59.015 33.333 0.00 0.00 0.00 2.29
305 306 6.823689 AGATTCACTTATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
306 307 7.251704 AGATTCACTTATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
307 308 7.985184 TGTAGATTCACTTATTTTGCTCCGTAT 59.015 33.333 0.00 0.00 0.00 3.06
308 309 7.277098 GTGTAGATTCACTTATTTTGCTCCGTA 59.723 37.037 0.00 0.00 35.68 4.02
309 310 6.092259 GTGTAGATTCACTTATTTTGCTCCGT 59.908 38.462 0.00 0.00 35.68 4.69
310 311 6.313905 AGTGTAGATTCACTTATTTTGCTCCG 59.686 38.462 0.00 0.00 44.92 4.63
311 312 7.550906 AGAGTGTAGATTCACTTATTTTGCTCC 59.449 37.037 0.98 0.00 46.81 4.70
312 313 8.485976 AGAGTGTAGATTCACTTATTTTGCTC 57.514 34.615 0.98 0.00 46.81 4.26
313 314 9.944376 TTAGAGTGTAGATTCACTTATTTTGCT 57.056 29.630 0.98 0.00 46.81 3.91
328 329 9.967346 GCATGTAGACATATTTTAGAGTGTAGA 57.033 33.333 0.00 0.00 34.26 2.59
329 330 9.750125 TGCATGTAGACATATTTTAGAGTGTAG 57.250 33.333 0.00 0.00 34.26 2.74
331 332 9.265901 GATGCATGTAGACATATTTTAGAGTGT 57.734 33.333 2.46 0.00 34.26 3.55
332 333 9.486497 AGATGCATGTAGACATATTTTAGAGTG 57.514 33.333 2.46 0.00 34.26 3.51
333 334 9.486497 CAGATGCATGTAGACATATTTTAGAGT 57.514 33.333 2.46 0.00 34.26 3.24
334 335 9.486497 ACAGATGCATGTAGACATATTTTAGAG 57.514 33.333 2.46 0.00 34.26 2.43
338 339 9.565090 ACATACAGATGCATGTAGACATATTTT 57.435 29.630 2.46 0.00 38.96 1.82
339 340 9.565090 AACATACAGATGCATGTAGACATATTT 57.435 29.630 2.46 0.00 38.96 1.40
343 344 9.866798 CTATAACATACAGATGCATGTAGACAT 57.133 33.333 2.46 0.00 38.96 3.06
344 345 8.860088 ACTATAACATACAGATGCATGTAGACA 58.140 33.333 2.46 0.00 38.96 3.41
345 346 9.347934 GACTATAACATACAGATGCATGTAGAC 57.652 37.037 2.46 0.00 38.96 2.59
346 347 8.523658 GGACTATAACATACAGATGCATGTAGA 58.476 37.037 2.46 0.00 38.96 2.59
347 348 8.306761 TGGACTATAACATACAGATGCATGTAG 58.693 37.037 2.46 0.00 38.96 2.74
348 349 8.189119 TGGACTATAACATACAGATGCATGTA 57.811 34.615 2.46 2.64 39.85 2.29
349 350 7.066307 TGGACTATAACATACAGATGCATGT 57.934 36.000 2.46 0.00 36.43 3.21
350 351 8.557592 AATGGACTATAACATACAGATGCATG 57.442 34.615 2.46 0.00 36.43 4.06
351 352 9.006839 CAAATGGACTATAACATACAGATGCAT 57.993 33.333 0.00 0.00 36.43 3.96
352 353 8.210265 TCAAATGGACTATAACATACAGATGCA 58.790 33.333 0.00 0.00 36.43 3.96
353 354 8.607441 TCAAATGGACTATAACATACAGATGC 57.393 34.615 0.00 0.00 36.43 3.91
368 369 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
369 370 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
386 387 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
387 388 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
388 389 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
389 390 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
390 391 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
391 392 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
392 393 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
393 394 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
394 395 6.723052 CCTACTCCCTCCGTTCCTAAATATAA 59.277 42.308 0.00 0.00 0.00 0.98
395 396 6.045931 TCCTACTCCCTCCGTTCCTAAATATA 59.954 42.308 0.00 0.00 0.00 0.86
396 397 5.085219 CCTACTCCCTCCGTTCCTAAATAT 58.915 45.833 0.00 0.00 0.00 1.28
397 398 4.168675 TCCTACTCCCTCCGTTCCTAAATA 59.831 45.833 0.00 0.00 0.00 1.40
398 399 3.052338 TCCTACTCCCTCCGTTCCTAAAT 60.052 47.826 0.00 0.00 0.00 1.40
399 400 2.312741 TCCTACTCCCTCCGTTCCTAAA 59.687 50.000 0.00 0.00 0.00 1.85
400 401 1.925255 TCCTACTCCCTCCGTTCCTAA 59.075 52.381 0.00 0.00 0.00 2.69
401 402 1.493871 CTCCTACTCCCTCCGTTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
402 403 0.259356 CTCCTACTCCCTCCGTTCCT 59.741 60.000 0.00 0.00 0.00 3.36
403 404 0.258194 TCTCCTACTCCCTCCGTTCC 59.742 60.000 0.00 0.00 0.00 3.62
404 405 2.025898 CTTCTCCTACTCCCTCCGTTC 58.974 57.143 0.00 0.00 0.00 3.95
405 406 1.639628 TCTTCTCCTACTCCCTCCGTT 59.360 52.381 0.00 0.00 0.00 4.44
406 407 1.064537 GTCTTCTCCTACTCCCTCCGT 60.065 57.143 0.00 0.00 0.00 4.69
407 408 1.213430 AGTCTTCTCCTACTCCCTCCG 59.787 57.143 0.00 0.00 0.00 4.63
408 409 2.242708 TGAGTCTTCTCCTACTCCCTCC 59.757 54.545 0.00 0.00 41.19 4.30
409 410 3.053917 ACTGAGTCTTCTCCTACTCCCTC 60.054 52.174 0.00 0.00 41.19 4.30
410 411 2.923629 ACTGAGTCTTCTCCTACTCCCT 59.076 50.000 0.00 0.00 41.19 4.20
411 412 3.375647 ACTGAGTCTTCTCCTACTCCC 57.624 52.381 0.00 0.00 41.19 4.30
412 413 7.994334 TCTATAAACTGAGTCTTCTCCTACTCC 59.006 40.741 0.00 0.00 41.19 3.85
413 414 8.833493 GTCTATAAACTGAGTCTTCTCCTACTC 58.167 40.741 0.00 0.00 42.04 2.59
414 415 8.554011 AGTCTATAAACTGAGTCTTCTCCTACT 58.446 37.037 0.00 0.00 39.75 2.57
415 416 8.741603 AGTCTATAAACTGAGTCTTCTCCTAC 57.258 38.462 0.00 0.00 39.75 3.18
416 417 8.549731 TGAGTCTATAAACTGAGTCTTCTCCTA 58.450 37.037 0.00 0.00 39.75 2.94
417 418 7.406916 TGAGTCTATAAACTGAGTCTTCTCCT 58.593 38.462 0.00 0.00 39.75 3.69
418 419 7.633193 TGAGTCTATAAACTGAGTCTTCTCC 57.367 40.000 0.00 0.00 39.75 3.71
419 420 8.516234 TGTTGAGTCTATAAACTGAGTCTTCTC 58.484 37.037 0.00 0.00 40.79 2.87
420 421 8.410673 TGTTGAGTCTATAAACTGAGTCTTCT 57.589 34.615 0.00 0.00 34.66 2.85
421 422 9.646427 AATGTTGAGTCTATAAACTGAGTCTTC 57.354 33.333 0.00 0.00 34.66 2.87
424 425 9.856488 TGTAATGTTGAGTCTATAAACTGAGTC 57.144 33.333 0.00 0.00 34.29 3.36
425 426 9.640963 GTGTAATGTTGAGTCTATAAACTGAGT 57.359 33.333 0.00 0.00 0.00 3.41
426 427 9.639601 TGTGTAATGTTGAGTCTATAAACTGAG 57.360 33.333 0.00 0.00 0.00 3.35
434 435 9.371136 CTTGTGTATGTGTAATGTTGAGTCTAT 57.629 33.333 0.00 0.00 0.00 1.98
435 436 8.364894 ACTTGTGTATGTGTAATGTTGAGTCTA 58.635 33.333 0.00 0.00 0.00 2.59
436 437 7.171508 CACTTGTGTATGTGTAATGTTGAGTCT 59.828 37.037 0.00 0.00 0.00 3.24
437 438 7.170828 TCACTTGTGTATGTGTAATGTTGAGTC 59.829 37.037 0.46 0.00 34.54 3.36
438 439 6.989759 TCACTTGTGTATGTGTAATGTTGAGT 59.010 34.615 0.46 0.00 34.54 3.41
439 440 7.290842 GTCACTTGTGTATGTGTAATGTTGAG 58.709 38.462 0.46 0.00 34.54 3.02
440 441 6.203915 GGTCACTTGTGTATGTGTAATGTTGA 59.796 38.462 0.46 0.00 34.54 3.18
441 442 6.370593 GGTCACTTGTGTATGTGTAATGTTG 58.629 40.000 0.46 0.00 34.54 3.33
442 443 5.178623 CGGTCACTTGTGTATGTGTAATGTT 59.821 40.000 0.46 0.00 34.54 2.71
443 444 4.688879 CGGTCACTTGTGTATGTGTAATGT 59.311 41.667 0.46 0.00 34.54 2.71
444 445 4.688879 ACGGTCACTTGTGTATGTGTAATG 59.311 41.667 0.46 0.00 34.54 1.90
445 446 4.890088 ACGGTCACTTGTGTATGTGTAAT 58.110 39.130 0.46 0.00 34.54 1.89
446 447 4.325028 ACGGTCACTTGTGTATGTGTAA 57.675 40.909 0.46 0.00 34.54 2.41
447 448 4.325028 AACGGTCACTTGTGTATGTGTA 57.675 40.909 0.46 0.00 34.54 2.90
448 449 2.902705 ACGGTCACTTGTGTATGTGT 57.097 45.000 0.46 0.00 34.54 3.72
449 450 5.006844 TGTTAAACGGTCACTTGTGTATGTG 59.993 40.000 0.46 0.00 34.29 3.21
450 451 5.117584 TGTTAAACGGTCACTTGTGTATGT 58.882 37.500 0.46 0.00 0.00 2.29
451 452 5.660629 TGTTAAACGGTCACTTGTGTATG 57.339 39.130 0.46 0.00 0.00 2.39
452 453 7.156673 ACTATGTTAAACGGTCACTTGTGTAT 58.843 34.615 0.46 0.00 0.00 2.29
453 454 6.514947 ACTATGTTAAACGGTCACTTGTGTA 58.485 36.000 0.46 0.00 0.00 2.90
454 455 5.362263 ACTATGTTAAACGGTCACTTGTGT 58.638 37.500 0.46 0.00 0.00 3.72
455 456 5.917541 ACTATGTTAAACGGTCACTTGTG 57.082 39.130 0.00 0.00 0.00 3.33
456 457 8.526147 AGTATACTATGTTAAACGGTCACTTGT 58.474 33.333 2.75 0.00 0.00 3.16
457 458 8.922058 AGTATACTATGTTAAACGGTCACTTG 57.078 34.615 2.75 0.00 0.00 3.16
458 459 9.578439 GAAGTATACTATGTTAAACGGTCACTT 57.422 33.333 5.65 0.00 0.00 3.16
459 460 8.193438 GGAAGTATACTATGTTAAACGGTCACT 58.807 37.037 5.65 0.00 0.00 3.41
460 461 7.975616 TGGAAGTATACTATGTTAAACGGTCAC 59.024 37.037 5.65 0.00 0.00 3.67
461 462 8.065473 TGGAAGTATACTATGTTAAACGGTCA 57.935 34.615 5.65 0.00 0.00 4.02
462 463 8.975439 CATGGAAGTATACTATGTTAAACGGTC 58.025 37.037 5.65 0.00 0.00 4.79
463 464 7.440255 GCATGGAAGTATACTATGTTAAACGGT 59.560 37.037 5.65 0.00 0.00 4.83
464 465 7.095355 GGCATGGAAGTATACTATGTTAAACGG 60.095 40.741 5.65 0.00 0.00 4.44
465 466 7.439955 TGGCATGGAAGTATACTATGTTAAACG 59.560 37.037 5.65 0.00 0.00 3.60
466 467 8.671384 TGGCATGGAAGTATACTATGTTAAAC 57.329 34.615 5.65 0.00 0.00 2.01
467 468 9.283768 CATGGCATGGAAGTATACTATGTTAAA 57.716 33.333 19.80 0.00 0.00 1.52
468 469 8.436778 ACATGGCATGGAAGTATACTATGTTAA 58.563 33.333 29.49 0.00 33.60 2.01
469 470 7.877612 CACATGGCATGGAAGTATACTATGTTA 59.122 37.037 29.49 1.28 33.60 2.41
470 471 6.712095 CACATGGCATGGAAGTATACTATGTT 59.288 38.462 29.49 1.44 33.60 2.71
471 472 6.233434 CACATGGCATGGAAGTATACTATGT 58.767 40.000 29.49 6.81 33.60 2.29
472 473 5.645067 CCACATGGCATGGAAGTATACTATG 59.355 44.000 29.49 14.36 39.87 2.23
473 474 5.809001 CCACATGGCATGGAAGTATACTAT 58.191 41.667 29.49 2.76 39.87 2.12
474 475 5.227569 CCACATGGCATGGAAGTATACTA 57.772 43.478 29.49 0.00 39.87 1.82
475 476 4.090761 CCACATGGCATGGAAGTATACT 57.909 45.455 29.49 0.00 39.87 2.12
489 490 1.259609 ATTGTTGGTCTGCCACATGG 58.740 50.000 0.00 0.00 46.01 3.66
490 491 2.610976 CCAATTGTTGGTCTGCCACATG 60.611 50.000 4.43 0.00 46.01 3.21
491 492 1.619827 CCAATTGTTGGTCTGCCACAT 59.380 47.619 4.43 0.00 46.01 3.21
492 493 1.039068 CCAATTGTTGGTCTGCCACA 58.961 50.000 4.43 0.00 46.01 4.17
493 494 3.892200 CCAATTGTTGGTCTGCCAC 57.108 52.632 4.43 0.00 46.01 5.01
502 503 6.796072 CAGTTCAACACAAAAACCAATTGTTG 59.204 34.615 4.43 4.92 45.48 3.33
503 504 6.708054 TCAGTTCAACACAAAAACCAATTGTT 59.292 30.769 4.43 0.00 38.90 2.83
504 505 6.226787 TCAGTTCAACACAAAAACCAATTGT 58.773 32.000 4.43 0.00 41.50 2.71
512 513 5.420421 TGAGGGAATCAGTTCAACACAAAAA 59.580 36.000 0.00 0.00 36.01 1.94
517 518 3.503748 CCTTGAGGGAATCAGTTCAACAC 59.496 47.826 0.00 0.00 39.68 3.32
536 537 0.109412 CGTCTCGGCTAACGTTCCTT 60.109 55.000 2.82 0.00 44.69 3.36
540 541 2.056577 CTTTTCGTCTCGGCTAACGTT 58.943 47.619 5.88 5.88 44.69 3.99
589 591 0.527817 GATGAAAGGGCGATCGTCGT 60.528 55.000 17.81 13.74 42.81 4.34
595 597 1.270518 CCGATGAGATGAAAGGGCGAT 60.271 52.381 0.00 0.00 0.00 4.58
598 600 1.587547 GTCCGATGAGATGAAAGGGC 58.412 55.000 0.00 0.00 0.00 5.19
606 608 4.944317 TGCTAATAGATCGTCCGATGAGAT 59.056 41.667 6.95 0.00 34.60 2.75
608 610 4.686839 TGCTAATAGATCGTCCGATGAG 57.313 45.455 6.95 0.00 34.60 2.90
640 654 9.701098 CCCACTTTATTCGTAGCACTATAATAA 57.299 33.333 0.00 5.01 0.00 1.40
641 655 7.816031 GCCCACTTTATTCGTAGCACTATAATA 59.184 37.037 0.00 0.00 0.00 0.98
642 656 6.649557 GCCCACTTTATTCGTAGCACTATAAT 59.350 38.462 0.00 0.00 0.00 1.28
643 657 5.987347 GCCCACTTTATTCGTAGCACTATAA 59.013 40.000 0.00 0.00 0.00 0.98
644 658 5.535333 GCCCACTTTATTCGTAGCACTATA 58.465 41.667 0.00 0.00 0.00 1.31
645 659 4.377897 GCCCACTTTATTCGTAGCACTAT 58.622 43.478 0.00 0.00 0.00 2.12
646 660 3.735820 CGCCCACTTTATTCGTAGCACTA 60.736 47.826 0.00 0.00 0.00 2.74
647 661 2.629051 GCCCACTTTATTCGTAGCACT 58.371 47.619 0.00 0.00 0.00 4.40
648 662 1.326548 CGCCCACTTTATTCGTAGCAC 59.673 52.381 0.00 0.00 0.00 4.40
649 663 1.066716 ACGCCCACTTTATTCGTAGCA 60.067 47.619 0.00 0.00 0.00 3.49
650 664 1.591619 GACGCCCACTTTATTCGTAGC 59.408 52.381 0.00 0.00 33.21 3.58
665 679 2.047179 GGAGTGAACCTGGACGCC 60.047 66.667 0.00 0.00 0.00 5.68
667 681 3.048602 ACGGAGTGAACCTGGACG 58.951 61.111 0.00 0.00 42.51 4.79
682 696 1.864862 CTTCAAGCAGGCAGACACG 59.135 57.895 0.00 0.00 0.00 4.49
683 697 0.888285 AGCTTCAAGCAGGCAGACAC 60.888 55.000 13.10 0.00 45.56 3.67
687 701 1.085091 CTACAGCTTCAAGCAGGCAG 58.915 55.000 13.10 1.71 45.56 4.85
690 704 1.367659 GCTCTACAGCTTCAAGCAGG 58.632 55.000 13.10 5.81 45.56 4.85
700 714 1.102154 TCTCAGCTCTGCTCTACAGC 58.898 55.000 0.00 0.00 46.76 4.40
704 718 2.523325 ACCTTCTCAGCTCTGCTCTA 57.477 50.000 0.00 0.00 36.40 2.43
705 719 1.550072 GAACCTTCTCAGCTCTGCTCT 59.450 52.381 0.00 0.00 36.40 4.09
709 723 0.605589 ACCGAACCTTCTCAGCTCTG 59.394 55.000 0.00 0.00 0.00 3.35
730 744 3.054875 CCCATGACTCAACTCCAATCTGA 60.055 47.826 0.00 0.00 0.00 3.27
743 757 1.069358 GGTCGATCCTTCCCATGACTC 59.931 57.143 0.00 0.00 0.00 3.36
763 784 4.502431 GGTGGGGATTGTGTTTTAACTTGG 60.502 45.833 0.00 0.00 0.00 3.61
770 791 2.698274 GTTCAGGTGGGGATTGTGTTTT 59.302 45.455 0.00 0.00 0.00 2.43
812 833 3.007398 AGAAGAGATTTATAGGGGCGCAG 59.993 47.826 10.83 0.00 0.00 5.18
846 873 5.080337 TGTAGGATGGTCTGATATGGAGAC 58.920 45.833 0.00 0.00 39.38 3.36
858 885 1.044611 GAGAGGCCTGTAGGATGGTC 58.955 60.000 12.00 0.00 37.39 4.02
860 887 1.133199 AGAGAGAGGCCTGTAGGATGG 60.133 57.143 12.00 0.00 37.39 3.51
869 896 0.032217 CAAGGGAGAGAGAGAGGCCT 60.032 60.000 3.86 3.86 0.00 5.19
883 912 0.179048 TGTGTGTGAGACAGCAAGGG 60.179 55.000 0.00 0.00 34.28 3.95
887 916 2.212652 GAATGTGTGTGTGAGACAGCA 58.787 47.619 0.00 0.00 34.28 4.41
912 991 3.926821 TTTTTGGAGCGTATGTTTCCC 57.073 42.857 5.51 0.00 0.00 3.97
953 1033 4.297510 CATGTTGGCAACGATTTCTTCAA 58.702 39.130 24.03 4.12 42.51 2.69
954 1034 3.305267 CCATGTTGGCAACGATTTCTTCA 60.305 43.478 24.03 4.93 42.51 3.02
960 1040 0.521291 CGACCATGTTGGCAACGATT 59.479 50.000 24.03 9.84 42.67 3.34
1260 1355 2.741092 GTGTTGGAGAGGCGGACA 59.259 61.111 0.00 0.00 0.00 4.02
1485 1586 1.191489 TGATTCCCGGAGAGTGCACA 61.191 55.000 21.04 0.00 0.00 4.57
1608 1710 2.731976 GCGGAAGGTATTGACGATGATC 59.268 50.000 0.00 0.00 0.00 2.92
1620 1722 1.596934 CTCCAGCAAGCGGAAGGTA 59.403 57.895 6.98 0.00 43.76 3.08
1742 1844 3.112075 CGTCACCGCGCTTCACAT 61.112 61.111 5.56 0.00 0.00 3.21
1762 1864 4.057428 GTCCAGCCACGCGAGACT 62.057 66.667 15.93 0.00 34.38 3.24
1921 2023 1.998315 CTCGGAGTTCTTCGACGAGTA 59.002 52.381 10.24 0.00 44.18 2.59
2080 2188 2.213499 CACTGAGTTTCACCCACAGTC 58.787 52.381 0.00 0.00 39.33 3.51
2091 2199 1.000955 ACCGATTCGAGCACTGAGTTT 59.999 47.619 7.83 0.00 0.00 2.66
2106 2214 3.785859 ACGCCTGCCATGACCGAT 61.786 61.111 0.00 0.00 0.00 4.18
2140 2248 2.017783 GTTGCTCCGCGTACAACGA 61.018 57.895 16.76 0.97 46.05 3.85
2214 2322 4.227197 CCTCTACCACCTCCTTGTCATAT 58.773 47.826 0.00 0.00 0.00 1.78
2312 2426 2.123248 TTTCGCCTGCCTCATCACCA 62.123 55.000 0.00 0.00 0.00 4.17
2344 2458 1.290134 GTCTCTGATTCCCCACCCTT 58.710 55.000 0.00 0.00 0.00 3.95
2362 2476 4.657824 CAGCCCCGTCAACGTCGT 62.658 66.667 1.48 0.00 37.74 4.34
2454 2584 5.856126 TGATGGAACTAAAATCACACGTC 57.144 39.130 0.00 0.00 0.00 4.34
2471 2601 5.697633 CCACAAGTCAAAGGAAAAATGATGG 59.302 40.000 0.00 0.00 0.00 3.51
2483 2620 8.971321 CATAAAGAATGAAACCACAAGTCAAAG 58.029 33.333 0.00 0.00 37.86 2.77
2597 2741 3.814945 GTGTAAGCACATGAGCAAGTTC 58.185 45.455 17.61 3.88 44.64 3.01
2725 2870 5.120399 ACAACGTGAGGAAAATCTAACACA 58.880 37.500 0.00 0.00 0.00 3.72
2757 2918 1.078709 CACAACGGATGCAATCGACT 58.921 50.000 16.98 3.17 46.86 4.18
2837 3002 2.176247 TATCCAGGTGGGGAGTCTTC 57.824 55.000 0.00 0.00 41.08 2.87
2855 3020 9.383519 CTGAGTTACTGCCTCTTTTGAAATATA 57.616 33.333 0.00 0.00 0.00 0.86
2884 3049 6.507900 TCCTCTCTTCTCGCAATATGTAAAG 58.492 40.000 0.00 0.00 0.00 1.85
2891 3056 5.598416 TGATTTCCTCTCTTCTCGCAATA 57.402 39.130 0.00 0.00 0.00 1.90
2895 3060 2.543430 GCATGATTTCCTCTCTTCTCGC 59.457 50.000 0.00 0.00 0.00 5.03
2923 3088 3.437795 ACTACGAGGACACGCCGG 61.438 66.667 0.00 0.00 43.43 6.13
2939 3104 5.122554 TCTCATCGTCTTAAGACTGAGACAC 59.877 44.000 33.03 12.69 44.40 3.67
2946 3111 5.723672 TTTGGTCTCATCGTCTTAAGACT 57.276 39.130 28.30 12.06 42.66 3.24
2947 3112 8.649973 ATTATTTGGTCTCATCGTCTTAAGAC 57.350 34.615 23.25 23.25 41.47 3.01
2990 3155 3.932710 CGATGCAAACCAAACTCTAGCTA 59.067 43.478 0.00 0.00 0.00 3.32
3051 3217 5.305128 TGCTCCTCATTTTGTGGAAGATTTT 59.695 36.000 0.56 0.00 39.27 1.82
3052 3218 4.834496 TGCTCCTCATTTTGTGGAAGATTT 59.166 37.500 0.56 0.00 39.27 2.17
3074 3240 2.644992 GTTCGGCCCTTTGTGCTG 59.355 61.111 0.00 0.00 36.41 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.