Multiple sequence alignment - TraesCS2D01G163600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G163600 chr2D 100.000 2490 0 0 1 2490 107868605 107871094 0.000000e+00 4599
1 TraesCS2D01G163600 chr2D 94.190 1618 43 17 913 2484 619642041 619640429 0.000000e+00 2420
2 TraesCS2D01G163600 chr2D 93.032 1593 41 22 964 2490 634132363 634133951 0.000000e+00 2263
3 TraesCS2D01G163600 chr7B 93.757 1906 62 16 630 2484 525928425 525930324 0.000000e+00 2808
4 TraesCS2D01G163600 chr7B 91.947 1900 83 24 626 2490 585992350 585994214 0.000000e+00 2597
5 TraesCS2D01G163600 chr7B 90.949 1591 69 26 950 2490 732822980 732824545 0.000000e+00 2071
6 TraesCS2D01G163600 chr7B 90.306 1599 83 31 950 2490 732848108 732849692 0.000000e+00 2028
7 TraesCS2D01G163600 chr1D 93.513 1927 55 20 630 2490 468090027 468088105 0.000000e+00 2802
8 TraesCS2D01G163600 chr1D 93.164 1931 55 24 629 2490 490432737 490434659 0.000000e+00 2763
9 TraesCS2D01G163600 chr1D 93.049 1597 49 15 948 2490 66296726 66298314 0.000000e+00 2278
10 TraesCS2D01G163600 chr1D 79.588 1068 126 36 629 1647 395450053 395449029 0.000000e+00 680
11 TraesCS2D01G163600 chr5D 93.473 1915 56 19 628 2481 543865236 543867142 0.000000e+00 2780
12 TraesCS2D01G163600 chr5D 92.383 1930 60 22 630 2490 459635834 459633923 0.000000e+00 2669
13 TraesCS2D01G163600 chr5D 93.215 1636 39 19 923 2490 447966329 447967960 0.000000e+00 2340
14 TraesCS2D01G163600 chr2B 93.171 1889 87 16 630 2484 28872495 28870615 0.000000e+00 2736
15 TraesCS2D01G163600 chr2B 92.131 1614 66 21 630 2204 794747226 794745635 0.000000e+00 2220
16 TraesCS2D01G163600 chr2B 90.753 292 23 3 342 629 157765481 157765772 1.080000e-103 387
17 TraesCS2D01G163600 chr4D 93.263 1885 53 23 630 2484 455275590 455273750 0.000000e+00 2710
18 TraesCS2D01G163600 chr4D 92.395 1933 59 22 629 2490 36561617 36559702 0.000000e+00 2675
19 TraesCS2D01G163600 chr4D 93.076 1502 33 19 1056 2490 398658408 398659905 0.000000e+00 2132
20 TraesCS2D01G163600 chr6B 92.320 1927 60 19 630 2490 704787877 704785973 0.000000e+00 2658
21 TraesCS2D01G163600 chr6B 91.003 1934 84 37 627 2490 286753973 286755886 0.000000e+00 2525
22 TraesCS2D01G163600 chr5B 93.400 1606 58 14 629 2204 696359898 696361485 0.000000e+00 2335
23 TraesCS2D01G163600 chr3D 92.857 1554 40 18 1004 2490 21251981 21250432 0.000000e+00 2189
24 TraesCS2D01G163600 chr3D 94.493 1035 43 4 626 1651 613613597 613614626 0.000000e+00 1583
25 TraesCS2D01G163600 chr3D 89.136 359 10 6 2150 2484 77348727 77348374 1.060000e-113 420
26 TraesCS2D01G163600 chrUn 96.628 1305 33 4 629 1922 33192672 33193976 0.000000e+00 2156
27 TraesCS2D01G163600 chrUn 95.310 597 8 7 1904 2484 33202987 33203579 0.000000e+00 929
28 TraesCS2D01G163600 chrUn 91.506 624 11 13 1902 2490 95407786 95408402 0.000000e+00 821
29 TraesCS2D01G163600 chr7D 90.529 908 30 20 1620 2490 629950597 629951485 0.000000e+00 1149
30 TraesCS2D01G163600 chr6D 89.629 781 30 14 1753 2490 443447645 443446873 0.000000e+00 946
31 TraesCS2D01G163600 chr2A 90.370 135 12 1 173 306 104165935 104166069 2.550000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G163600 chr2D 107868605 107871094 2489 False 4599 4599 100.000 1 2490 1 chr2D.!!$F1 2489
1 TraesCS2D01G163600 chr2D 619640429 619642041 1612 True 2420 2420 94.190 913 2484 1 chr2D.!!$R1 1571
2 TraesCS2D01G163600 chr2D 634132363 634133951 1588 False 2263 2263 93.032 964 2490 1 chr2D.!!$F2 1526
3 TraesCS2D01G163600 chr7B 525928425 525930324 1899 False 2808 2808 93.757 630 2484 1 chr7B.!!$F1 1854
4 TraesCS2D01G163600 chr7B 585992350 585994214 1864 False 2597 2597 91.947 626 2490 1 chr7B.!!$F2 1864
5 TraesCS2D01G163600 chr7B 732822980 732824545 1565 False 2071 2071 90.949 950 2490 1 chr7B.!!$F3 1540
6 TraesCS2D01G163600 chr7B 732848108 732849692 1584 False 2028 2028 90.306 950 2490 1 chr7B.!!$F4 1540
7 TraesCS2D01G163600 chr1D 468088105 468090027 1922 True 2802 2802 93.513 630 2490 1 chr1D.!!$R2 1860
8 TraesCS2D01G163600 chr1D 490432737 490434659 1922 False 2763 2763 93.164 629 2490 1 chr1D.!!$F2 1861
9 TraesCS2D01G163600 chr1D 66296726 66298314 1588 False 2278 2278 93.049 948 2490 1 chr1D.!!$F1 1542
10 TraesCS2D01G163600 chr1D 395449029 395450053 1024 True 680 680 79.588 629 1647 1 chr1D.!!$R1 1018
11 TraesCS2D01G163600 chr5D 543865236 543867142 1906 False 2780 2780 93.473 628 2481 1 chr5D.!!$F2 1853
12 TraesCS2D01G163600 chr5D 459633923 459635834 1911 True 2669 2669 92.383 630 2490 1 chr5D.!!$R1 1860
13 TraesCS2D01G163600 chr5D 447966329 447967960 1631 False 2340 2340 93.215 923 2490 1 chr5D.!!$F1 1567
14 TraesCS2D01G163600 chr2B 28870615 28872495 1880 True 2736 2736 93.171 630 2484 1 chr2B.!!$R1 1854
15 TraesCS2D01G163600 chr2B 794745635 794747226 1591 True 2220 2220 92.131 630 2204 1 chr2B.!!$R2 1574
16 TraesCS2D01G163600 chr4D 455273750 455275590 1840 True 2710 2710 93.263 630 2484 1 chr4D.!!$R2 1854
17 TraesCS2D01G163600 chr4D 36559702 36561617 1915 True 2675 2675 92.395 629 2490 1 chr4D.!!$R1 1861
18 TraesCS2D01G163600 chr4D 398658408 398659905 1497 False 2132 2132 93.076 1056 2490 1 chr4D.!!$F1 1434
19 TraesCS2D01G163600 chr6B 704785973 704787877 1904 True 2658 2658 92.320 630 2490 1 chr6B.!!$R1 1860
20 TraesCS2D01G163600 chr6B 286753973 286755886 1913 False 2525 2525 91.003 627 2490 1 chr6B.!!$F1 1863
21 TraesCS2D01G163600 chr5B 696359898 696361485 1587 False 2335 2335 93.400 629 2204 1 chr5B.!!$F1 1575
22 TraesCS2D01G163600 chr3D 21250432 21251981 1549 True 2189 2189 92.857 1004 2490 1 chr3D.!!$R1 1486
23 TraesCS2D01G163600 chr3D 613613597 613614626 1029 False 1583 1583 94.493 626 1651 1 chr3D.!!$F1 1025
24 TraesCS2D01G163600 chrUn 33192672 33193976 1304 False 2156 2156 96.628 629 1922 1 chrUn.!!$F1 1293
25 TraesCS2D01G163600 chrUn 33202987 33203579 592 False 929 929 95.310 1904 2484 1 chrUn.!!$F2 580
26 TraesCS2D01G163600 chrUn 95407786 95408402 616 False 821 821 91.506 1902 2490 1 chrUn.!!$F3 588
27 TraesCS2D01G163600 chr7D 629950597 629951485 888 False 1149 1149 90.529 1620 2490 1 chr7D.!!$F1 870
28 TraesCS2D01G163600 chr6D 443446873 443447645 772 True 946 946 89.629 1753 2490 1 chr6D.!!$R1 737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
410 411 0.033796 ACCCATGTTCTGCTCCCATG 60.034 55.0 0.0 0.0 36.56 3.66 F
546 547 0.179108 GTGAGCGGCTACTTAGGTGG 60.179 60.0 0.6 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1253 1337 2.230653 CCACCACCCAGATCCACCA 61.231 63.158 0.0 0.0 0.0 4.17 R
1489 1590 2.490903 CAGATGCTTTAGTTGCTTGCCT 59.509 45.455 0.0 0.0 0.0 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.344904 GCTGCTGCATGTAAGGTAATG 57.655 47.619 11.11 0.00 39.41 1.90
21 22 2.684881 GCTGCTGCATGTAAGGTAATGT 59.315 45.455 11.11 0.00 39.41 2.71
22 23 3.488047 GCTGCTGCATGTAAGGTAATGTG 60.488 47.826 11.11 0.00 39.41 3.21
23 24 3.016031 TGCTGCATGTAAGGTAATGTGG 58.984 45.455 0.00 0.00 0.00 4.17
24 25 3.278574 GCTGCATGTAAGGTAATGTGGA 58.721 45.455 0.00 0.00 0.00 4.02
25 26 3.065371 GCTGCATGTAAGGTAATGTGGAC 59.935 47.826 0.00 0.00 0.00 4.02
26 27 4.260985 CTGCATGTAAGGTAATGTGGACA 58.739 43.478 0.00 0.00 0.00 4.02
27 28 4.657013 TGCATGTAAGGTAATGTGGACAA 58.343 39.130 0.00 0.00 0.00 3.18
28 29 5.073428 TGCATGTAAGGTAATGTGGACAAA 58.927 37.500 0.00 0.00 0.00 2.83
29 30 5.714333 TGCATGTAAGGTAATGTGGACAAAT 59.286 36.000 0.00 0.00 0.00 2.32
30 31 6.887002 TGCATGTAAGGTAATGTGGACAAATA 59.113 34.615 0.00 0.00 0.00 1.40
31 32 7.394641 TGCATGTAAGGTAATGTGGACAAATAA 59.605 33.333 0.00 0.00 0.00 1.40
32 33 7.700656 GCATGTAAGGTAATGTGGACAAATAAC 59.299 37.037 0.00 0.00 0.00 1.89
33 34 8.735315 CATGTAAGGTAATGTGGACAAATAACA 58.265 33.333 0.00 0.00 0.00 2.41
34 35 8.871629 TGTAAGGTAATGTGGACAAATAACAT 57.128 30.769 0.00 0.00 36.10 2.71
35 36 9.303116 TGTAAGGTAATGTGGACAAATAACATT 57.697 29.630 5.67 5.67 44.49 2.71
56 57 9.667107 AACATTTTTATAGTCATTTCTCCTCGA 57.333 29.630 0.00 0.00 0.00 4.04
57 58 9.838339 ACATTTTTATAGTCATTTCTCCTCGAT 57.162 29.630 0.00 0.00 0.00 3.59
67 68 9.703892 AGTCATTTCTCCTCGATATATCAAAAG 57.296 33.333 13.11 6.65 0.00 2.27
68 69 8.930760 GTCATTTCTCCTCGATATATCAAAAGG 58.069 37.037 13.11 14.30 0.00 3.11
69 70 8.097038 TCATTTCTCCTCGATATATCAAAAGGG 58.903 37.037 18.70 12.71 0.00 3.95
70 71 6.996180 TTCTCCTCGATATATCAAAAGGGT 57.004 37.500 18.70 0.00 0.00 4.34
71 72 6.346477 TCTCCTCGATATATCAAAAGGGTG 57.654 41.667 18.70 14.11 0.00 4.61
72 73 5.839063 TCTCCTCGATATATCAAAAGGGTGT 59.161 40.000 18.70 0.00 0.00 4.16
73 74 6.326583 TCTCCTCGATATATCAAAAGGGTGTT 59.673 38.462 18.70 0.00 0.00 3.32
74 75 6.895782 TCCTCGATATATCAAAAGGGTGTTT 58.104 36.000 18.70 0.00 0.00 2.83
75 76 7.343357 TCCTCGATATATCAAAAGGGTGTTTT 58.657 34.615 18.70 0.00 0.00 2.43
76 77 7.282224 TCCTCGATATATCAAAAGGGTGTTTTG 59.718 37.037 18.70 4.21 39.90 2.44
77 78 7.067008 CCTCGATATATCAAAAGGGTGTTTTGT 59.933 37.037 13.11 1.97 39.62 2.83
78 79 7.757526 TCGATATATCAAAAGGGTGTTTTGTG 58.242 34.615 13.11 0.00 39.62 3.33
79 80 6.972328 CGATATATCAAAAGGGTGTTTTGTGG 59.028 38.462 13.11 0.00 39.62 4.17
80 81 3.836365 ATCAAAAGGGTGTTTTGTGGG 57.164 42.857 9.42 0.00 39.62 4.61
81 82 1.208293 TCAAAAGGGTGTTTTGTGGGC 59.792 47.619 9.42 0.00 39.62 5.36
82 83 1.209261 CAAAAGGGTGTTTTGTGGGCT 59.791 47.619 2.67 0.00 35.35 5.19
83 84 1.578897 AAAGGGTGTTTTGTGGGCTT 58.421 45.000 0.00 0.00 0.00 4.35
84 85 1.119684 AAGGGTGTTTTGTGGGCTTC 58.880 50.000 0.00 0.00 0.00 3.86
85 86 0.759060 AGGGTGTTTTGTGGGCTTCC 60.759 55.000 0.00 0.00 0.00 3.46
86 87 1.745890 GGTGTTTTGTGGGCTTCCC 59.254 57.895 0.00 0.00 45.71 3.97
114 115 1.441311 GGGGGCGCATAAAACATGG 59.559 57.895 10.83 0.00 0.00 3.66
115 116 1.326951 GGGGGCGCATAAAACATGGT 61.327 55.000 10.83 0.00 0.00 3.55
116 117 1.394618 GGGGCGCATAAAACATGGTA 58.605 50.000 10.83 0.00 0.00 3.25
117 118 1.066454 GGGGCGCATAAAACATGGTAC 59.934 52.381 10.83 0.00 0.00 3.34
118 119 2.021457 GGGCGCATAAAACATGGTACT 58.979 47.619 10.83 0.00 0.00 2.73
119 120 2.425668 GGGCGCATAAAACATGGTACTT 59.574 45.455 10.83 0.00 0.00 2.24
120 121 3.628487 GGGCGCATAAAACATGGTACTTA 59.372 43.478 10.83 0.00 0.00 2.24
121 122 4.496840 GGGCGCATAAAACATGGTACTTAC 60.497 45.833 10.83 0.00 0.00 2.34
122 123 4.095185 GGCGCATAAAACATGGTACTTACA 59.905 41.667 10.83 0.00 0.00 2.41
123 124 5.392165 GGCGCATAAAACATGGTACTTACAA 60.392 40.000 10.83 0.00 0.00 2.41
124 125 6.262601 GCGCATAAAACATGGTACTTACAAT 58.737 36.000 0.30 0.00 0.00 2.71
125 126 6.413818 GCGCATAAAACATGGTACTTACAATC 59.586 38.462 0.30 0.00 0.00 2.67
126 127 6.910433 CGCATAAAACATGGTACTTACAATCC 59.090 38.462 0.00 0.00 0.00 3.01
127 128 6.910433 GCATAAAACATGGTACTTACAATCCG 59.090 38.462 0.00 0.00 0.00 4.18
128 129 7.201661 GCATAAAACATGGTACTTACAATCCGA 60.202 37.037 0.00 0.00 0.00 4.55
129 130 8.670135 CATAAAACATGGTACTTACAATCCGAA 58.330 33.333 0.00 0.00 0.00 4.30
130 131 7.696992 AAAACATGGTACTTACAATCCGAAT 57.303 32.000 0.00 0.00 0.00 3.34
131 132 6.677781 AACATGGTACTTACAATCCGAATG 57.322 37.500 0.00 0.00 0.00 2.67
132 133 5.123227 ACATGGTACTTACAATCCGAATGG 58.877 41.667 0.00 0.00 0.00 3.16
146 147 5.693769 TCCGAATGGAAAAAGTCTATCCT 57.306 39.130 0.00 0.00 42.85 3.24
147 148 5.428253 TCCGAATGGAAAAAGTCTATCCTG 58.572 41.667 0.00 0.00 42.85 3.86
148 149 5.045869 TCCGAATGGAAAAAGTCTATCCTGT 60.046 40.000 0.00 0.00 42.85 4.00
149 150 6.155565 TCCGAATGGAAAAAGTCTATCCTGTA 59.844 38.462 0.00 0.00 42.85 2.74
150 151 6.821665 CCGAATGGAAAAAGTCTATCCTGTAA 59.178 38.462 0.00 0.00 37.49 2.41
151 152 7.201617 CCGAATGGAAAAAGTCTATCCTGTAAC 60.202 40.741 0.00 0.00 37.49 2.50
152 153 7.201617 CGAATGGAAAAAGTCTATCCTGTAACC 60.202 40.741 0.00 0.00 34.24 2.85
153 154 6.442541 TGGAAAAAGTCTATCCTGTAACCA 57.557 37.500 0.00 0.00 34.24 3.67
154 155 7.027874 TGGAAAAAGTCTATCCTGTAACCAT 57.972 36.000 0.00 0.00 34.24 3.55
155 156 7.110155 TGGAAAAAGTCTATCCTGTAACCATC 58.890 38.462 0.00 0.00 34.24 3.51
156 157 7.110155 GGAAAAAGTCTATCCTGTAACCATCA 58.890 38.462 0.00 0.00 0.00 3.07
157 158 7.610305 GGAAAAAGTCTATCCTGTAACCATCAA 59.390 37.037 0.00 0.00 0.00 2.57
158 159 7.923414 AAAAGTCTATCCTGTAACCATCAAC 57.077 36.000 0.00 0.00 0.00 3.18
159 160 6.875972 AAGTCTATCCTGTAACCATCAACT 57.124 37.500 0.00 0.00 0.00 3.16
160 161 7.973048 AAGTCTATCCTGTAACCATCAACTA 57.027 36.000 0.00 0.00 0.00 2.24
161 162 8.554490 AAGTCTATCCTGTAACCATCAACTAT 57.446 34.615 0.00 0.00 0.00 2.12
162 163 8.554490 AGTCTATCCTGTAACCATCAACTATT 57.446 34.615 0.00 0.00 0.00 1.73
163 164 8.424918 AGTCTATCCTGTAACCATCAACTATTG 58.575 37.037 0.00 0.00 0.00 1.90
164 165 8.421784 GTCTATCCTGTAACCATCAACTATTGA 58.578 37.037 0.00 0.00 45.01 2.57
165 166 8.421784 TCTATCCTGTAACCATCAACTATTGAC 58.578 37.037 0.00 0.00 43.48 3.18
166 167 5.416083 TCCTGTAACCATCAACTATTGACG 58.584 41.667 0.00 0.00 43.48 4.35
167 168 5.046878 TCCTGTAACCATCAACTATTGACGT 60.047 40.000 0.00 0.00 43.48 4.34
168 169 5.642063 CCTGTAACCATCAACTATTGACGTT 59.358 40.000 0.00 9.53 43.48 3.99
169 170 6.402118 CCTGTAACCATCAACTATTGACGTTG 60.402 42.308 12.68 0.00 43.48 4.10
170 171 5.992829 TGTAACCATCAACTATTGACGTTGT 59.007 36.000 12.68 0.00 43.48 3.32
171 172 6.483974 TGTAACCATCAACTATTGACGTTGTT 59.516 34.615 12.68 8.18 43.48 2.83
172 173 5.607119 ACCATCAACTATTGACGTTGTTC 57.393 39.130 0.00 0.00 43.48 3.18
173 174 5.060506 ACCATCAACTATTGACGTTGTTCA 58.939 37.500 0.00 0.00 43.48 3.18
174 175 5.179368 ACCATCAACTATTGACGTTGTTCAG 59.821 40.000 0.00 0.00 43.48 3.02
175 176 5.408299 CCATCAACTATTGACGTTGTTCAGA 59.592 40.000 0.00 0.00 43.48 3.27
176 177 6.092670 CCATCAACTATTGACGTTGTTCAGAT 59.907 38.462 0.00 0.00 43.48 2.90
177 178 7.277760 CCATCAACTATTGACGTTGTTCAGATA 59.722 37.037 0.00 0.00 43.48 1.98
178 179 8.820933 CATCAACTATTGACGTTGTTCAGATAT 58.179 33.333 0.00 0.00 43.48 1.63
179 180 8.771920 TCAACTATTGACGTTGTTCAGATATT 57.228 30.769 0.00 0.00 41.76 1.28
180 181 8.655970 TCAACTATTGACGTTGTTCAGATATTG 58.344 33.333 0.00 0.00 41.76 1.90
181 182 7.539712 ACTATTGACGTTGTTCAGATATTGG 57.460 36.000 0.00 0.00 0.00 3.16
182 183 7.327975 ACTATTGACGTTGTTCAGATATTGGA 58.672 34.615 0.00 0.00 0.00 3.53
183 184 6.668541 ATTGACGTTGTTCAGATATTGGAG 57.331 37.500 0.00 0.00 0.00 3.86
184 185 4.503910 TGACGTTGTTCAGATATTGGAGG 58.496 43.478 0.00 0.00 0.00 4.30
185 186 4.221924 TGACGTTGTTCAGATATTGGAGGA 59.778 41.667 0.00 0.00 0.00 3.71
186 187 4.504858 ACGTTGTTCAGATATTGGAGGAC 58.495 43.478 0.00 0.00 0.00 3.85
187 188 4.020573 ACGTTGTTCAGATATTGGAGGACA 60.021 41.667 0.00 0.00 0.00 4.02
188 189 4.935205 CGTTGTTCAGATATTGGAGGACAA 59.065 41.667 0.00 0.00 44.54 3.18
190 191 6.238211 CGTTGTTCAGATATTGGAGGACAATC 60.238 42.308 0.00 0.00 46.67 2.67
191 192 6.312141 TGTTCAGATATTGGAGGACAATCA 57.688 37.500 0.00 0.00 46.67 2.57
192 193 6.720309 TGTTCAGATATTGGAGGACAATCAA 58.280 36.000 0.00 0.00 46.67 2.57
193 194 6.599244 TGTTCAGATATTGGAGGACAATCAAC 59.401 38.462 0.00 0.00 46.67 3.18
194 195 6.566079 TCAGATATTGGAGGACAATCAACT 57.434 37.500 0.00 0.00 46.67 3.16
195 196 6.351711 TCAGATATTGGAGGACAATCAACTG 58.648 40.000 0.00 5.62 46.67 3.16
196 197 6.070021 TCAGATATTGGAGGACAATCAACTGT 60.070 38.462 14.30 0.00 46.67 3.55
197 198 6.600822 CAGATATTGGAGGACAATCAACTGTT 59.399 38.462 0.00 0.00 46.67 3.16
198 199 7.770433 CAGATATTGGAGGACAATCAACTGTTA 59.230 37.037 0.00 0.00 46.67 2.41
199 200 8.328758 AGATATTGGAGGACAATCAACTGTTAA 58.671 33.333 0.00 0.00 46.67 2.01
200 201 8.877864 ATATTGGAGGACAATCAACTGTTAAA 57.122 30.769 0.00 0.00 46.67 1.52
201 202 7.595819 ATTGGAGGACAATCAACTGTTAAAA 57.404 32.000 0.00 0.00 46.67 1.52
202 203 6.385649 TGGAGGACAATCAACTGTTAAAAC 57.614 37.500 0.00 0.00 0.00 2.43
203 204 5.300792 TGGAGGACAATCAACTGTTAAAACC 59.699 40.000 0.00 0.00 0.00 3.27
204 205 5.300792 GGAGGACAATCAACTGTTAAAACCA 59.699 40.000 0.00 0.00 0.00 3.67
205 206 6.015434 GGAGGACAATCAACTGTTAAAACCAT 60.015 38.462 0.00 0.00 0.00 3.55
206 207 6.981722 AGGACAATCAACTGTTAAAACCATC 58.018 36.000 0.00 0.00 0.00 3.51
207 208 6.015434 AGGACAATCAACTGTTAAAACCATCC 60.015 38.462 0.00 0.00 0.00 3.51
208 209 6.239176 GGACAATCAACTGTTAAAACCATCCA 60.239 38.462 0.00 0.00 0.00 3.41
209 210 7.301868 ACAATCAACTGTTAAAACCATCCAT 57.698 32.000 0.00 0.00 0.00 3.41
210 211 7.734942 ACAATCAACTGTTAAAACCATCCATT 58.265 30.769 0.00 0.00 0.00 3.16
211 212 8.210265 ACAATCAACTGTTAAAACCATCCATTT 58.790 29.630 0.00 0.00 0.00 2.32
212 213 9.703892 CAATCAACTGTTAAAACCATCCATTTA 57.296 29.630 0.00 0.00 0.00 1.40
214 215 9.705290 ATCAACTGTTAAAACCATCCATTTAAC 57.295 29.630 12.02 12.02 45.53 2.01
215 216 8.145122 TCAACTGTTAAAACCATCCATTTAACC 58.855 33.333 14.85 2.95 45.09 2.85
216 217 6.999950 ACTGTTAAAACCATCCATTTAACCC 58.000 36.000 14.85 0.00 45.09 4.11
217 218 6.014070 ACTGTTAAAACCATCCATTTAACCCC 60.014 38.462 14.85 0.00 45.09 4.95
218 219 5.248705 TGTTAAAACCATCCATTTAACCCCC 59.751 40.000 14.85 0.00 45.09 5.40
219 220 3.864556 AAACCATCCATTTAACCCCCT 57.135 42.857 0.00 0.00 0.00 4.79
220 221 3.398318 AACCATCCATTTAACCCCCTC 57.602 47.619 0.00 0.00 0.00 4.30
221 222 1.214424 ACCATCCATTTAACCCCCTCG 59.786 52.381 0.00 0.00 0.00 4.63
222 223 1.478654 CCATCCATTTAACCCCCTCGG 60.479 57.143 0.00 0.00 37.81 4.63
231 232 2.035155 CCCCCTCGGGTGGTTTTC 59.965 66.667 0.55 0.00 45.50 2.29
232 233 2.535331 CCCCCTCGGGTGGTTTTCT 61.535 63.158 0.55 0.00 45.50 2.52
233 234 1.303317 CCCCTCGGGTGGTTTTCTG 60.303 63.158 0.55 0.00 38.25 3.02
234 235 1.758592 CCCTCGGGTGGTTTTCTGA 59.241 57.895 0.00 0.00 0.00 3.27
235 236 0.321653 CCCTCGGGTGGTTTTCTGAG 60.322 60.000 0.00 0.00 36.44 3.35
236 237 0.396811 CCTCGGGTGGTTTTCTGAGT 59.603 55.000 0.00 0.00 35.27 3.41
237 238 1.202770 CCTCGGGTGGTTTTCTGAGTT 60.203 52.381 0.00 0.00 35.27 3.01
238 239 1.873591 CTCGGGTGGTTTTCTGAGTTG 59.126 52.381 0.00 0.00 33.09 3.16
239 240 1.210967 TCGGGTGGTTTTCTGAGTTGT 59.789 47.619 0.00 0.00 0.00 3.32
240 241 2.021457 CGGGTGGTTTTCTGAGTTGTT 58.979 47.619 0.00 0.00 0.00 2.83
241 242 2.425668 CGGGTGGTTTTCTGAGTTGTTT 59.574 45.455 0.00 0.00 0.00 2.83
242 243 3.119280 CGGGTGGTTTTCTGAGTTGTTTT 60.119 43.478 0.00 0.00 0.00 2.43
243 244 4.619628 CGGGTGGTTTTCTGAGTTGTTTTT 60.620 41.667 0.00 0.00 0.00 1.94
244 245 4.629634 GGGTGGTTTTCTGAGTTGTTTTTG 59.370 41.667 0.00 0.00 0.00 2.44
245 246 5.234752 GGTGGTTTTCTGAGTTGTTTTTGT 58.765 37.500 0.00 0.00 0.00 2.83
246 247 5.347635 GGTGGTTTTCTGAGTTGTTTTTGTC 59.652 40.000 0.00 0.00 0.00 3.18
247 248 5.060446 GTGGTTTTCTGAGTTGTTTTTGTCG 59.940 40.000 0.00 0.00 0.00 4.35
248 249 5.048643 TGGTTTTCTGAGTTGTTTTTGTCGA 60.049 36.000 0.00 0.00 0.00 4.20
249 250 5.285370 GGTTTTCTGAGTTGTTTTTGTCGAC 59.715 40.000 9.11 9.11 0.00 4.20
250 251 3.918258 TCTGAGTTGTTTTTGTCGACG 57.082 42.857 11.62 0.00 0.00 5.12
251 252 3.255725 TCTGAGTTGTTTTTGTCGACGT 58.744 40.909 11.62 0.00 0.00 4.34
252 253 3.061563 TCTGAGTTGTTTTTGTCGACGTG 59.938 43.478 11.62 0.00 0.00 4.49
253 254 2.094575 TGAGTTGTTTTTGTCGACGTGG 59.905 45.455 11.62 0.00 0.00 4.94
254 255 1.185189 GTTGTTTTTGTCGACGTGGC 58.815 50.000 11.62 0.69 0.00 5.01
255 256 0.247735 TTGTTTTTGTCGACGTGGCG 60.248 50.000 11.62 0.00 0.00 5.69
256 257 2.001880 GTTTTTGTCGACGTGGCGC 61.002 57.895 11.62 0.00 0.00 6.53
257 258 3.170810 TTTTTGTCGACGTGGCGCC 62.171 57.895 22.73 22.73 0.00 6.53
258 259 4.893601 TTTGTCGACGTGGCGCCA 62.894 61.111 29.03 29.03 0.00 5.69
268 269 4.063967 TGGCGCCACGTCACCTAG 62.064 66.667 29.03 0.00 36.25 3.02
269 270 4.065281 GGCGCCACGTCACCTAGT 62.065 66.667 24.80 0.00 0.00 2.57
270 271 2.506438 GCGCCACGTCACCTAGTC 60.506 66.667 0.00 0.00 0.00 2.59
271 272 2.181021 CGCCACGTCACCTAGTCC 59.819 66.667 0.00 0.00 0.00 3.85
272 273 2.632544 CGCCACGTCACCTAGTCCA 61.633 63.158 0.00 0.00 0.00 4.02
273 274 1.898154 GCCACGTCACCTAGTCCAT 59.102 57.895 0.00 0.00 0.00 3.41
274 275 0.460284 GCCACGTCACCTAGTCCATG 60.460 60.000 0.00 0.00 0.00 3.66
275 276 0.895530 CCACGTCACCTAGTCCATGT 59.104 55.000 0.00 0.00 0.00 3.21
276 277 1.404181 CCACGTCACCTAGTCCATGTG 60.404 57.143 0.00 0.00 0.00 3.21
277 278 0.895530 ACGTCACCTAGTCCATGTGG 59.104 55.000 0.00 0.00 0.00 4.17
278 279 1.182667 CGTCACCTAGTCCATGTGGA 58.817 55.000 0.00 0.00 43.08 4.02
279 280 1.135139 CGTCACCTAGTCCATGTGGAG 59.865 57.143 1.07 0.00 46.49 3.86
280 281 2.180276 GTCACCTAGTCCATGTGGAGT 58.820 52.381 13.56 13.56 46.49 3.85
281 282 2.093973 GTCACCTAGTCCATGTGGAGTG 60.094 54.545 17.63 14.07 46.80 3.51
282 283 1.208052 CACCTAGTCCATGTGGAGTGG 59.792 57.143 17.63 14.75 46.80 4.00
284 285 0.833287 CTAGTCCATGTGGAGTGGGG 59.167 60.000 17.63 5.98 46.80 4.96
285 286 0.118346 TAGTCCATGTGGAGTGGGGT 59.882 55.000 17.63 0.00 46.80 4.95
286 287 1.201429 AGTCCATGTGGAGTGGGGTC 61.201 60.000 8.56 0.00 45.74 4.46
287 288 1.160870 TCCATGTGGAGTGGGGTCT 59.839 57.895 0.00 0.00 39.78 3.85
288 289 1.200760 TCCATGTGGAGTGGGGTCTG 61.201 60.000 0.00 0.00 39.78 3.51
289 290 1.200760 CCATGTGGAGTGGGGTCTGA 61.201 60.000 0.00 0.00 37.39 3.27
290 291 0.251354 CATGTGGAGTGGGGTCTGAG 59.749 60.000 0.00 0.00 0.00 3.35
291 292 0.178891 ATGTGGAGTGGGGTCTGAGT 60.179 55.000 0.00 0.00 0.00 3.41
292 293 0.832135 TGTGGAGTGGGGTCTGAGTC 60.832 60.000 0.00 0.00 0.00 3.36
293 294 0.832135 GTGGAGTGGGGTCTGAGTCA 60.832 60.000 0.00 0.00 0.00 3.41
294 295 0.542938 TGGAGTGGGGTCTGAGTCAG 60.543 60.000 14.36 14.36 0.00 3.51
295 296 1.594310 GAGTGGGGTCTGAGTCAGC 59.406 63.158 15.72 10.28 0.00 4.26
296 297 1.152247 AGTGGGGTCTGAGTCAGCA 60.152 57.895 15.72 4.69 0.00 4.41
297 298 0.764369 AGTGGGGTCTGAGTCAGCAA 60.764 55.000 15.72 0.00 0.00 3.91
298 299 0.321122 GTGGGGTCTGAGTCAGCAAG 60.321 60.000 15.72 0.00 0.00 4.01
299 300 1.298014 GGGGTCTGAGTCAGCAAGG 59.702 63.158 15.72 0.00 0.00 3.61
300 301 1.298014 GGGTCTGAGTCAGCAAGGG 59.702 63.158 15.72 0.00 0.00 3.95
301 302 1.298014 GGTCTGAGTCAGCAAGGGG 59.702 63.158 15.72 0.00 0.00 4.79
302 303 1.194781 GGTCTGAGTCAGCAAGGGGA 61.195 60.000 15.72 0.00 0.00 4.81
303 304 0.908198 GTCTGAGTCAGCAAGGGGAT 59.092 55.000 15.72 0.00 0.00 3.85
304 305 0.907486 TCTGAGTCAGCAAGGGGATG 59.093 55.000 15.72 0.00 0.00 3.51
305 306 0.107312 CTGAGTCAGCAAGGGGATGG 60.107 60.000 7.33 0.00 32.50 3.51
306 307 0.547471 TGAGTCAGCAAGGGGATGGA 60.547 55.000 0.00 0.00 32.50 3.41
307 308 0.620556 GAGTCAGCAAGGGGATGGAA 59.379 55.000 0.00 0.00 32.50 3.53
308 309 0.622665 AGTCAGCAAGGGGATGGAAG 59.377 55.000 0.00 0.00 32.50 3.46
309 310 0.620556 GTCAGCAAGGGGATGGAAGA 59.379 55.000 0.00 0.00 32.50 2.87
310 311 0.914644 TCAGCAAGGGGATGGAAGAG 59.085 55.000 0.00 0.00 32.50 2.85
311 312 0.106819 CAGCAAGGGGATGGAAGAGG 60.107 60.000 0.00 0.00 0.00 3.69
312 313 0.253347 AGCAAGGGGATGGAAGAGGA 60.253 55.000 0.00 0.00 0.00 3.71
313 314 0.106967 GCAAGGGGATGGAAGAGGAC 60.107 60.000 0.00 0.00 0.00 3.85
314 315 1.289160 CAAGGGGATGGAAGAGGACA 58.711 55.000 0.00 0.00 0.00 4.02
315 316 1.211457 CAAGGGGATGGAAGAGGACAG 59.789 57.143 0.00 0.00 0.00 3.51
316 317 0.985490 AGGGGATGGAAGAGGACAGC 60.985 60.000 0.00 0.00 0.00 4.40
317 318 1.274703 GGGGATGGAAGAGGACAGCA 61.275 60.000 0.00 0.00 0.00 4.41
318 319 0.842635 GGGATGGAAGAGGACAGCAT 59.157 55.000 0.00 0.00 0.00 3.79
319 320 1.202746 GGGATGGAAGAGGACAGCATC 60.203 57.143 0.00 0.00 0.00 3.91
320 321 1.767681 GGATGGAAGAGGACAGCATCT 59.232 52.381 0.00 0.00 36.59 2.90
321 322 2.485124 GGATGGAAGAGGACAGCATCTG 60.485 54.545 0.00 0.00 34.97 2.90
322 323 0.907486 TGGAAGAGGACAGCATCTGG 59.093 55.000 0.00 0.00 34.97 3.86
323 324 0.908198 GGAAGAGGACAGCATCTGGT 59.092 55.000 0.00 0.00 34.97 4.00
324 325 1.134551 GGAAGAGGACAGCATCTGGTC 60.135 57.143 0.00 0.00 34.97 4.02
325 326 0.908198 AAGAGGACAGCATCTGGTCC 59.092 55.000 2.66 2.66 34.97 4.46
326 327 0.042431 AGAGGACAGCATCTGGTCCT 59.958 55.000 12.79 12.79 41.25 3.85
327 328 0.463620 GAGGACAGCATCTGGTCCTC 59.536 60.000 21.05 21.05 43.73 3.71
328 329 1.142748 GGACAGCATCTGGTCCTCG 59.857 63.158 3.65 0.00 35.51 4.63
329 330 1.520342 GACAGCATCTGGTCCTCGC 60.520 63.158 0.00 0.00 35.51 5.03
330 331 2.202987 CAGCATCTGGTCCTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
331 332 3.842923 AGCATCTGGTCCTCGCCG 61.843 66.667 0.00 0.00 0.00 6.46
353 354 3.204119 CGCCATCCTGCATCGCAA 61.204 61.111 0.00 0.00 38.41 4.85
354 355 2.719979 GCCATCCTGCATCGCAAG 59.280 61.111 0.00 0.00 38.41 4.01
365 366 3.885814 TCGCAAGACCAACCTCCT 58.114 55.556 0.00 0.00 45.01 3.69
366 367 1.371183 TCGCAAGACCAACCTCCTG 59.629 57.895 0.00 0.00 45.01 3.86
367 368 2.328099 CGCAAGACCAACCTCCTGC 61.328 63.158 0.00 0.00 43.02 4.85
368 369 1.228245 GCAAGACCAACCTCCTGCA 60.228 57.895 0.00 0.00 0.00 4.41
369 370 1.239968 GCAAGACCAACCTCCTGCAG 61.240 60.000 6.78 6.78 0.00 4.41
378 379 2.179517 CTCCTGCAGGACGTCGTC 59.820 66.667 32.00 17.16 39.78 4.20
379 380 3.669036 CTCCTGCAGGACGTCGTCG 62.669 68.421 32.00 16.17 39.78 5.12
389 390 4.175489 CGTCGTCGTCGCCATCCT 62.175 66.667 0.00 0.00 36.96 3.24
390 391 2.816360 CGTCGTCGTCGCCATCCTA 61.816 63.158 0.00 0.00 36.96 2.94
391 392 1.430632 GTCGTCGTCGCCATCCTAA 59.569 57.895 0.00 0.00 36.96 2.69
392 393 0.864797 GTCGTCGTCGCCATCCTAAC 60.865 60.000 0.00 0.00 36.96 2.34
393 394 1.588139 CGTCGTCGCCATCCTAACC 60.588 63.158 0.00 0.00 0.00 2.85
394 395 1.227176 GTCGTCGCCATCCTAACCC 60.227 63.158 0.00 0.00 0.00 4.11
395 396 1.683025 TCGTCGCCATCCTAACCCA 60.683 57.895 0.00 0.00 0.00 4.51
396 397 1.046472 TCGTCGCCATCCTAACCCAT 61.046 55.000 0.00 0.00 0.00 4.00
397 398 0.880278 CGTCGCCATCCTAACCCATG 60.880 60.000 0.00 0.00 0.00 3.66
398 399 0.180406 GTCGCCATCCTAACCCATGT 59.820 55.000 0.00 0.00 0.00 3.21
399 400 0.916086 TCGCCATCCTAACCCATGTT 59.084 50.000 0.00 0.00 38.52 2.71
400 401 1.134220 TCGCCATCCTAACCCATGTTC 60.134 52.381 0.00 0.00 35.87 3.18
401 402 1.134098 CGCCATCCTAACCCATGTTCT 60.134 52.381 0.00 0.00 35.87 3.01
402 403 2.301346 GCCATCCTAACCCATGTTCTG 58.699 52.381 0.00 0.00 35.87 3.02
403 404 2.301346 CCATCCTAACCCATGTTCTGC 58.699 52.381 0.00 0.00 35.87 4.26
404 405 2.092212 CCATCCTAACCCATGTTCTGCT 60.092 50.000 0.00 0.00 35.87 4.24
405 406 3.209410 CATCCTAACCCATGTTCTGCTC 58.791 50.000 0.00 0.00 35.87 4.26
406 407 1.559682 TCCTAACCCATGTTCTGCTCC 59.440 52.381 0.00 0.00 35.87 4.70
407 408 1.408822 CCTAACCCATGTTCTGCTCCC 60.409 57.143 0.00 0.00 35.87 4.30
408 409 1.281867 CTAACCCATGTTCTGCTCCCA 59.718 52.381 0.00 0.00 35.87 4.37
409 410 0.706433 AACCCATGTTCTGCTCCCAT 59.294 50.000 0.00 0.00 0.00 4.00
410 411 0.033796 ACCCATGTTCTGCTCCCATG 60.034 55.000 0.00 0.00 36.56 3.66
411 412 2.803203 CCATGTTCTGCTCCCATGG 58.197 57.895 4.14 4.14 46.86 3.66
412 413 2.803203 CATGTTCTGCTCCCATGGG 58.197 57.895 26.30 26.30 33.87 4.00
413 414 0.754217 CATGTTCTGCTCCCATGGGG 60.754 60.000 30.93 21.33 46.11 4.96
415 416 1.077429 GTTCTGCTCCCATGGGGAC 60.077 63.158 30.93 22.19 46.17 4.46
416 417 2.669133 TTCTGCTCCCATGGGGACG 61.669 63.158 30.93 19.35 46.17 4.79
417 418 4.181010 CTGCTCCCATGGGGACGG 62.181 72.222 30.93 22.41 46.17 4.79
419 420 4.489771 GCTCCCATGGGGACGGTG 62.490 72.222 30.93 14.24 46.17 4.94
420 421 3.797353 CTCCCATGGGGACGGTGG 61.797 72.222 30.93 8.49 46.17 4.61
439 440 4.063967 CGGTGGACACGCCTGCTA 62.064 66.667 0.00 0.00 45.28 3.49
440 441 2.584608 GGTGGACACGCCTGCTAT 59.415 61.111 0.00 0.00 44.06 2.97
441 442 1.815421 GGTGGACACGCCTGCTATG 60.815 63.158 0.00 0.00 44.06 2.23
442 443 1.815421 GTGGACACGCCTGCTATGG 60.815 63.158 0.00 0.00 37.63 2.74
451 452 4.569023 CTGCTATGGCGACGGCGA 62.569 66.667 18.90 0.00 42.25 5.54
452 453 4.569023 TGCTATGGCGACGGCGAG 62.569 66.667 18.90 16.51 42.25 5.03
454 455 3.592814 CTATGGCGACGGCGAGGA 61.593 66.667 18.90 0.00 41.24 3.71
455 456 3.544167 CTATGGCGACGGCGAGGAG 62.544 68.421 18.90 0.25 41.24 3.69
465 466 4.724262 GCGAGGAGCCCTTCTTTT 57.276 55.556 0.00 0.00 40.81 2.27
466 467 2.175236 GCGAGGAGCCCTTCTTTTG 58.825 57.895 0.00 0.00 40.81 2.44
467 468 1.308783 GCGAGGAGCCCTTCTTTTGG 61.309 60.000 0.00 0.00 40.81 3.28
473 474 3.791640 CCCTTCTTTTGGGCCACC 58.208 61.111 5.23 0.00 37.99 4.61
474 475 2.275380 CCCTTCTTTTGGGCCACCG 61.275 63.158 5.23 0.00 40.75 4.94
475 476 2.650778 CTTCTTTTGGGCCACCGC 59.349 61.111 5.23 0.00 40.75 5.68
476 477 2.123683 TTCTTTTGGGCCACCGCA 60.124 55.556 5.23 0.00 40.75 5.69
477 478 2.146073 CTTCTTTTGGGCCACCGCAG 62.146 60.000 5.23 0.00 40.75 5.18
478 479 4.362476 CTTTTGGGCCACCGCAGC 62.362 66.667 5.23 0.00 40.75 5.25
496 497 3.536917 CGCATCTCCCGGTGGCTA 61.537 66.667 0.00 0.00 0.00 3.93
497 498 2.109181 GCATCTCCCGGTGGCTAC 59.891 66.667 0.00 0.00 0.00 3.58
498 499 2.435693 GCATCTCCCGGTGGCTACT 61.436 63.158 0.00 0.00 0.00 2.57
499 500 1.443407 CATCTCCCGGTGGCTACTG 59.557 63.158 1.23 1.23 0.00 2.74
500 501 2.435693 ATCTCCCGGTGGCTACTGC 61.436 63.158 2.96 0.00 38.76 4.40
501 502 2.880629 ATCTCCCGGTGGCTACTGCT 62.881 60.000 2.96 0.00 39.59 4.24
502 503 3.075005 TCCCGGTGGCTACTGCTC 61.075 66.667 2.96 0.00 39.59 4.26
503 504 4.514577 CCCGGTGGCTACTGCTCG 62.515 72.222 2.96 0.00 39.59 5.03
504 505 3.760035 CCGGTGGCTACTGCTCGT 61.760 66.667 2.96 0.00 39.59 4.18
505 506 2.202623 CGGTGGCTACTGCTCGTC 60.203 66.667 0.00 0.00 39.59 4.20
506 507 2.701780 CGGTGGCTACTGCTCGTCT 61.702 63.158 0.00 0.00 39.59 4.18
507 508 1.592223 GGTGGCTACTGCTCGTCTT 59.408 57.895 0.00 0.00 39.59 3.01
508 509 0.737715 GGTGGCTACTGCTCGTCTTG 60.738 60.000 0.00 0.00 39.59 3.02
509 510 0.737715 GTGGCTACTGCTCGTCTTGG 60.738 60.000 0.00 0.00 39.59 3.61
510 511 1.153549 GGCTACTGCTCGTCTTGGG 60.154 63.158 0.00 0.00 39.59 4.12
511 512 1.811679 GCTACTGCTCGTCTTGGGC 60.812 63.158 0.00 0.00 36.03 5.36
512 513 1.153549 CTACTGCTCGTCTTGGGCC 60.154 63.158 0.00 0.00 0.00 5.80
513 514 2.890847 CTACTGCTCGTCTTGGGCCG 62.891 65.000 0.00 0.00 0.00 6.13
521 522 4.838152 TCTTGGGCCGCGCATCTC 62.838 66.667 11.35 0.00 0.00 2.75
543 544 4.711980 CGTGAGCGGCTACTTAGG 57.288 61.111 0.60 0.00 0.00 2.69
544 545 1.807886 CGTGAGCGGCTACTTAGGT 59.192 57.895 0.60 0.00 0.00 3.08
545 546 0.525668 CGTGAGCGGCTACTTAGGTG 60.526 60.000 0.60 0.00 0.00 4.00
546 547 0.179108 GTGAGCGGCTACTTAGGTGG 60.179 60.000 0.60 0.00 0.00 4.61
547 548 0.323999 TGAGCGGCTACTTAGGTGGA 60.324 55.000 0.60 0.00 0.00 4.02
548 549 0.386113 GAGCGGCTACTTAGGTGGAG 59.614 60.000 0.60 0.00 0.00 3.86
549 550 1.043673 AGCGGCTACTTAGGTGGAGG 61.044 60.000 0.00 0.00 0.00 4.30
550 551 1.442148 CGGCTACTTAGGTGGAGGC 59.558 63.158 0.00 0.00 0.00 4.70
551 552 1.043673 CGGCTACTTAGGTGGAGGCT 61.044 60.000 0.00 0.00 32.58 4.58
552 553 0.753867 GGCTACTTAGGTGGAGGCTC 59.246 60.000 5.78 5.78 0.00 4.70
553 554 1.486211 GCTACTTAGGTGGAGGCTCA 58.514 55.000 17.69 0.00 0.00 4.26
554 555 1.410882 GCTACTTAGGTGGAGGCTCAG 59.589 57.143 17.69 6.28 0.00 3.35
555 556 1.410882 CTACTTAGGTGGAGGCTCAGC 59.589 57.143 17.69 11.84 35.58 4.26
566 567 2.360475 GCTCAGCCACCAACCTCC 60.360 66.667 0.00 0.00 0.00 4.30
567 568 2.046892 CTCAGCCACCAACCTCCG 60.047 66.667 0.00 0.00 0.00 4.63
568 569 3.612247 CTCAGCCACCAACCTCCGG 62.612 68.421 0.00 0.00 0.00 5.14
591 592 3.702048 CGGTGGGCGAGAGGGAAA 61.702 66.667 0.00 0.00 0.00 3.13
592 593 2.269241 GGTGGGCGAGAGGGAAAG 59.731 66.667 0.00 0.00 0.00 2.62
593 594 2.269241 GTGGGCGAGAGGGAAAGG 59.731 66.667 0.00 0.00 0.00 3.11
594 595 3.009115 TGGGCGAGAGGGAAAGGG 61.009 66.667 0.00 0.00 0.00 3.95
595 596 2.687566 GGGCGAGAGGGAAAGGGA 60.688 66.667 0.00 0.00 0.00 4.20
596 597 2.736826 GGGCGAGAGGGAAAGGGAG 61.737 68.421 0.00 0.00 0.00 4.30
597 598 2.188207 GCGAGAGGGAAAGGGAGC 59.812 66.667 0.00 0.00 0.00 4.70
598 599 2.904131 CGAGAGGGAAAGGGAGCC 59.096 66.667 0.00 0.00 0.00 4.70
599 600 2.736826 CGAGAGGGAAAGGGAGCCC 61.737 68.421 0.00 0.00 45.04 5.19
603 604 2.280079 GGGAAAGGGAGCCCATGG 59.720 66.667 4.14 4.14 44.07 3.66
626 627 2.978824 GCCTACGGCCAGTGAGAA 59.021 61.111 2.24 0.00 44.06 2.87
707 708 1.402613 CGAATGAATGGCTGTGATGCA 59.597 47.619 0.00 0.00 34.04 3.96
714 715 0.950555 TGGCTGTGATGCAACGTCTC 60.951 55.000 0.00 0.00 34.04 3.36
719 720 1.337728 TGTGATGCAACGTCTCCGAAT 60.338 47.619 0.00 0.00 37.88 3.34
931 980 2.362889 CGCCCCCTCCATTGCTTT 60.363 61.111 0.00 0.00 0.00 3.51
936 985 0.926293 CCCCTCCATTGCTTTCCCTA 59.074 55.000 0.00 0.00 0.00 3.53
1128 1197 3.593442 TGTGTGAGGGAAGAAAATGGT 57.407 42.857 0.00 0.00 0.00 3.55
1204 1283 7.038302 AGGTTAGATCTGTGTTCTTGACCAATA 60.038 37.037 5.18 0.00 33.78 1.90
1211 1294 4.941263 TGTGTTCTTGACCAATACTATGGC 59.059 41.667 0.00 0.00 44.75 4.40
1253 1337 4.921644 TCCTTTTTCCTCGAATTAGGGT 57.078 40.909 0.00 0.00 37.24 4.34
1287 1371 3.047857 TGGTGGATCTAGGATTCATGCA 58.952 45.455 0.00 0.00 0.00 3.96
1314 1407 1.269569 GCCCCTTGTTTTTCAGGTTCG 60.270 52.381 0.00 0.00 0.00 3.95
1488 1589 4.960938 AGTGCAGAACTGAAGTGTGAATA 58.039 39.130 5.97 0.00 37.88 1.75
1489 1590 5.368145 AGTGCAGAACTGAAGTGTGAATAA 58.632 37.500 5.97 0.00 37.88 1.40
1884 1999 1.683011 CGTGAGAAAATGGGCCCTGAT 60.683 52.381 25.70 5.95 0.00 2.90
2289 2601 6.634837 CACAAATAATAGCACGAAACACACAA 59.365 34.615 0.00 0.00 0.00 3.33
2290 2602 7.325821 CACAAATAATAGCACGAAACACACAAT 59.674 33.333 0.00 0.00 0.00 2.71
2291 2603 8.508062 ACAAATAATAGCACGAAACACACAATA 58.492 29.630 0.00 0.00 0.00 1.90
2292 2604 9.502145 CAAATAATAGCACGAAACACACAATAT 57.498 29.630 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.684881 ACATTACCTTACATGCAGCAGC 59.315 45.455 0.00 0.00 42.57 5.25
2 3 3.016031 CCACATTACCTTACATGCAGCA 58.984 45.455 0.00 0.00 0.00 4.41
4 5 4.260985 TGTCCACATTACCTTACATGCAG 58.739 43.478 0.00 0.00 0.00 4.41
5 6 4.293662 TGTCCACATTACCTTACATGCA 57.706 40.909 0.00 0.00 0.00 3.96
6 7 5.637006 TTTGTCCACATTACCTTACATGC 57.363 39.130 0.00 0.00 0.00 4.06
7 8 8.735315 TGTTATTTGTCCACATTACCTTACATG 58.265 33.333 0.00 0.00 0.00 3.21
8 9 8.871629 TGTTATTTGTCCACATTACCTTACAT 57.128 30.769 0.00 0.00 0.00 2.29
9 10 8.871629 ATGTTATTTGTCCACATTACCTTACA 57.128 30.769 0.00 0.00 0.00 2.41
30 31 9.667107 TCGAGGAGAAATGACTATAAAAATGTT 57.333 29.630 0.00 0.00 0.00 2.71
31 32 9.838339 ATCGAGGAGAAATGACTATAAAAATGT 57.162 29.630 0.00 0.00 0.00 2.71
41 42 9.703892 CTTTTGATATATCGAGGAGAAATGACT 57.296 33.333 8.19 0.00 0.00 3.41
42 43 8.930760 CCTTTTGATATATCGAGGAGAAATGAC 58.069 37.037 18.08 0.00 0.00 3.06
43 44 8.097038 CCCTTTTGATATATCGAGGAGAAATGA 58.903 37.037 21.94 0.00 0.00 2.57
44 45 7.880195 ACCCTTTTGATATATCGAGGAGAAATG 59.120 37.037 21.94 12.19 0.00 2.32
45 46 7.880195 CACCCTTTTGATATATCGAGGAGAAAT 59.120 37.037 21.94 7.34 0.00 2.17
46 47 7.147549 ACACCCTTTTGATATATCGAGGAGAAA 60.148 37.037 21.94 9.29 0.00 2.52
47 48 6.326583 ACACCCTTTTGATATATCGAGGAGAA 59.673 38.462 21.94 7.54 0.00 2.87
48 49 5.839063 ACACCCTTTTGATATATCGAGGAGA 59.161 40.000 21.94 0.97 0.00 3.71
49 50 6.102897 ACACCCTTTTGATATATCGAGGAG 57.897 41.667 21.94 17.53 0.00 3.69
50 51 6.494666 AACACCCTTTTGATATATCGAGGA 57.505 37.500 21.94 8.65 0.00 3.71
51 52 7.067008 ACAAAACACCCTTTTGATATATCGAGG 59.933 37.037 16.82 16.82 40.73 4.63
52 53 7.910162 CACAAAACACCCTTTTGATATATCGAG 59.090 37.037 11.52 6.04 40.73 4.04
53 54 7.148154 CCACAAAACACCCTTTTGATATATCGA 60.148 37.037 11.52 3.31 40.73 3.59
54 55 6.972328 CCACAAAACACCCTTTTGATATATCG 59.028 38.462 11.52 0.00 40.73 2.92
55 56 7.264947 CCCACAAAACACCCTTTTGATATATC 58.735 38.462 11.52 5.73 40.73 1.63
56 57 6.351796 GCCCACAAAACACCCTTTTGATATAT 60.352 38.462 11.52 0.00 40.73 0.86
57 58 5.046950 GCCCACAAAACACCCTTTTGATATA 60.047 40.000 11.52 0.00 40.73 0.86
58 59 4.262851 GCCCACAAAACACCCTTTTGATAT 60.263 41.667 11.52 0.00 40.73 1.63
59 60 3.070302 GCCCACAAAACACCCTTTTGATA 59.930 43.478 11.52 0.00 40.73 2.15
60 61 2.158827 GCCCACAAAACACCCTTTTGAT 60.159 45.455 11.52 0.00 40.73 2.57
61 62 1.208293 GCCCACAAAACACCCTTTTGA 59.792 47.619 11.52 0.00 40.73 2.69
62 63 1.209261 AGCCCACAAAACACCCTTTTG 59.791 47.619 4.38 4.38 43.09 2.44
63 64 1.578897 AGCCCACAAAACACCCTTTT 58.421 45.000 0.00 0.00 0.00 2.27
64 65 1.484653 GAAGCCCACAAAACACCCTTT 59.515 47.619 0.00 0.00 0.00 3.11
65 66 1.119684 GAAGCCCACAAAACACCCTT 58.880 50.000 0.00 0.00 0.00 3.95
66 67 0.759060 GGAAGCCCACAAAACACCCT 60.759 55.000 0.00 0.00 0.00 4.34
67 68 1.745890 GGAAGCCCACAAAACACCC 59.254 57.895 0.00 0.00 0.00 4.61
68 69 1.745890 GGGAAGCCCACAAAACACC 59.254 57.895 0.00 0.00 44.65 4.16
96 97 1.326951 ACCATGTTTTATGCGCCCCC 61.327 55.000 4.18 0.00 0.00 5.40
97 98 1.066454 GTACCATGTTTTATGCGCCCC 59.934 52.381 4.18 0.00 0.00 5.80
98 99 2.021457 AGTACCATGTTTTATGCGCCC 58.979 47.619 4.18 0.00 0.00 6.13
99 100 3.775661 AAGTACCATGTTTTATGCGCC 57.224 42.857 4.18 0.00 0.00 6.53
100 101 5.224562 TGTAAGTACCATGTTTTATGCGC 57.775 39.130 0.00 0.00 0.00 6.09
101 102 6.910433 GGATTGTAAGTACCATGTTTTATGCG 59.090 38.462 0.00 0.00 0.00 4.73
102 103 6.910433 CGGATTGTAAGTACCATGTTTTATGC 59.090 38.462 0.00 0.00 0.00 3.14
103 104 8.203937 TCGGATTGTAAGTACCATGTTTTATG 57.796 34.615 0.00 0.00 0.00 1.90
104 105 8.795842 TTCGGATTGTAAGTACCATGTTTTAT 57.204 30.769 0.00 0.00 0.00 1.40
105 106 8.670135 CATTCGGATTGTAAGTACCATGTTTTA 58.330 33.333 0.00 0.00 0.00 1.52
106 107 7.362574 CCATTCGGATTGTAAGTACCATGTTTT 60.363 37.037 0.00 0.00 0.00 2.43
107 108 6.094881 CCATTCGGATTGTAAGTACCATGTTT 59.905 38.462 0.00 0.00 0.00 2.83
108 109 5.588648 CCATTCGGATTGTAAGTACCATGTT 59.411 40.000 0.00 0.00 0.00 2.71
109 110 5.104693 TCCATTCGGATTGTAAGTACCATGT 60.105 40.000 0.00 0.00 35.91 3.21
110 111 5.364778 TCCATTCGGATTGTAAGTACCATG 58.635 41.667 0.00 0.00 35.91 3.66
111 112 5.623956 TCCATTCGGATTGTAAGTACCAT 57.376 39.130 0.00 0.00 35.91 3.55
112 113 5.423704 TTCCATTCGGATTGTAAGTACCA 57.576 39.130 0.00 0.00 42.41 3.25
113 114 6.746745 TTTTCCATTCGGATTGTAAGTACC 57.253 37.500 0.00 0.00 42.41 3.34
114 115 7.813645 ACTTTTTCCATTCGGATTGTAAGTAC 58.186 34.615 0.00 0.00 42.41 2.73
115 116 7.881232 AGACTTTTTCCATTCGGATTGTAAGTA 59.119 33.333 0.00 0.00 42.41 2.24
116 117 6.715264 AGACTTTTTCCATTCGGATTGTAAGT 59.285 34.615 0.00 0.00 42.41 2.24
117 118 7.145932 AGACTTTTTCCATTCGGATTGTAAG 57.854 36.000 0.00 0.00 42.41 2.34
118 119 8.801882 ATAGACTTTTTCCATTCGGATTGTAA 57.198 30.769 0.00 0.00 42.41 2.41
119 120 7.497909 GGATAGACTTTTTCCATTCGGATTGTA 59.502 37.037 0.00 0.00 42.41 2.41
120 121 6.318900 GGATAGACTTTTTCCATTCGGATTGT 59.681 38.462 0.00 0.00 42.41 2.71
121 122 6.543831 AGGATAGACTTTTTCCATTCGGATTG 59.456 38.462 0.00 0.00 42.41 2.67
122 123 6.543831 CAGGATAGACTTTTTCCATTCGGATT 59.456 38.462 0.00 0.00 42.41 3.01
123 124 6.058183 CAGGATAGACTTTTTCCATTCGGAT 58.942 40.000 0.00 0.00 42.41 4.18
124 125 5.045869 ACAGGATAGACTTTTTCCATTCGGA 60.046 40.000 0.00 0.00 40.60 4.55
125 126 5.186198 ACAGGATAGACTTTTTCCATTCGG 58.814 41.667 0.00 0.00 31.65 4.30
126 127 7.201617 GGTTACAGGATAGACTTTTTCCATTCG 60.202 40.741 0.00 0.00 31.65 3.34
127 128 7.610305 TGGTTACAGGATAGACTTTTTCCATTC 59.390 37.037 0.00 0.00 31.65 2.67
128 129 7.466804 TGGTTACAGGATAGACTTTTTCCATT 58.533 34.615 0.00 0.00 31.65 3.16
129 130 7.027874 TGGTTACAGGATAGACTTTTTCCAT 57.972 36.000 0.00 0.00 31.65 3.41
130 131 6.442541 TGGTTACAGGATAGACTTTTTCCA 57.557 37.500 0.00 0.00 31.65 3.53
131 132 7.110155 TGATGGTTACAGGATAGACTTTTTCC 58.890 38.462 0.00 0.00 0.00 3.13
132 133 8.451748 GTTGATGGTTACAGGATAGACTTTTTC 58.548 37.037 0.00 0.00 0.00 2.29
133 134 8.164070 AGTTGATGGTTACAGGATAGACTTTTT 58.836 33.333 0.00 0.00 0.00 1.94
134 135 7.690256 AGTTGATGGTTACAGGATAGACTTTT 58.310 34.615 0.00 0.00 0.00 2.27
135 136 7.259088 AGTTGATGGTTACAGGATAGACTTT 57.741 36.000 0.00 0.00 0.00 2.66
136 137 6.875972 AGTTGATGGTTACAGGATAGACTT 57.124 37.500 0.00 0.00 0.00 3.01
137 138 8.424918 CAATAGTTGATGGTTACAGGATAGACT 58.575 37.037 0.00 0.00 0.00 3.24
138 139 8.421784 TCAATAGTTGATGGTTACAGGATAGAC 58.578 37.037 0.00 0.00 34.08 2.59
139 140 8.421784 GTCAATAGTTGATGGTTACAGGATAGA 58.578 37.037 0.00 0.00 42.47 1.98
140 141 7.382488 CGTCAATAGTTGATGGTTACAGGATAG 59.618 40.741 4.39 0.00 42.47 2.08
141 142 7.207383 CGTCAATAGTTGATGGTTACAGGATA 58.793 38.462 4.39 0.00 42.47 2.59
142 143 6.049149 CGTCAATAGTTGATGGTTACAGGAT 58.951 40.000 4.39 0.00 42.47 3.24
143 144 5.416083 CGTCAATAGTTGATGGTTACAGGA 58.584 41.667 4.39 0.00 42.47 3.86
144 145 5.642063 AACGTCAATAGTTGATGGTTACAGG 59.358 40.000 14.37 0.00 43.85 4.00
145 146 6.147164 ACAACGTCAATAGTTGATGGTTACAG 59.853 38.462 14.85 1.60 43.85 2.74
146 147 5.992829 ACAACGTCAATAGTTGATGGTTACA 59.007 36.000 14.85 0.00 43.85 2.41
147 148 6.476243 ACAACGTCAATAGTTGATGGTTAC 57.524 37.500 14.85 0.00 43.85 2.50
148 149 6.706716 TGAACAACGTCAATAGTTGATGGTTA 59.293 34.615 14.85 0.00 43.85 2.85
149 150 5.529430 TGAACAACGTCAATAGTTGATGGTT 59.471 36.000 14.85 10.10 43.85 3.67
156 157 7.822334 TCCAATATCTGAACAACGTCAATAGTT 59.178 33.333 0.00 0.00 0.00 2.24
157 158 7.327975 TCCAATATCTGAACAACGTCAATAGT 58.672 34.615 0.00 0.00 0.00 2.12
158 159 7.042456 CCTCCAATATCTGAACAACGTCAATAG 60.042 40.741 0.00 0.00 0.00 1.73
159 160 6.761242 CCTCCAATATCTGAACAACGTCAATA 59.239 38.462 0.00 0.00 0.00 1.90
160 161 5.586243 CCTCCAATATCTGAACAACGTCAAT 59.414 40.000 0.00 0.00 0.00 2.57
161 162 4.935205 CCTCCAATATCTGAACAACGTCAA 59.065 41.667 0.00 0.00 0.00 3.18
162 163 4.221924 TCCTCCAATATCTGAACAACGTCA 59.778 41.667 0.00 0.00 0.00 4.35
163 164 4.567159 GTCCTCCAATATCTGAACAACGTC 59.433 45.833 0.00 0.00 0.00 4.34
164 165 4.020573 TGTCCTCCAATATCTGAACAACGT 60.021 41.667 0.00 0.00 0.00 3.99
165 166 4.503910 TGTCCTCCAATATCTGAACAACG 58.496 43.478 0.00 0.00 0.00 4.10
166 167 6.599244 TGATTGTCCTCCAATATCTGAACAAC 59.401 38.462 0.00 0.00 43.87 3.32
167 168 6.720309 TGATTGTCCTCCAATATCTGAACAA 58.280 36.000 0.00 0.00 43.87 2.83
168 169 6.312141 TGATTGTCCTCCAATATCTGAACA 57.688 37.500 0.00 0.00 43.87 3.18
169 170 6.825721 AGTTGATTGTCCTCCAATATCTGAAC 59.174 38.462 0.00 0.00 43.87 3.18
170 171 6.825213 CAGTTGATTGTCCTCCAATATCTGAA 59.175 38.462 0.00 0.00 43.87 3.02
171 172 6.070021 ACAGTTGATTGTCCTCCAATATCTGA 60.070 38.462 14.45 0.00 43.87 3.27
172 173 6.118170 ACAGTTGATTGTCCTCCAATATCTG 58.882 40.000 0.00 0.00 43.87 2.90
173 174 6.319048 ACAGTTGATTGTCCTCCAATATCT 57.681 37.500 0.00 0.00 43.87 1.98
174 175 8.506168 TTAACAGTTGATTGTCCTCCAATATC 57.494 34.615 0.00 0.00 43.87 1.63
175 176 8.877864 TTTAACAGTTGATTGTCCTCCAATAT 57.122 30.769 0.00 0.00 43.87 1.28
176 177 8.573035 GTTTTAACAGTTGATTGTCCTCCAATA 58.427 33.333 0.00 0.00 43.87 1.90
177 178 7.433680 GTTTTAACAGTTGATTGTCCTCCAAT 58.566 34.615 0.00 0.00 46.51 3.16
178 179 6.183360 GGTTTTAACAGTTGATTGTCCTCCAA 60.183 38.462 0.00 0.00 37.49 3.53
179 180 5.300792 GGTTTTAACAGTTGATTGTCCTCCA 59.699 40.000 0.00 0.00 0.00 3.86
180 181 5.300792 TGGTTTTAACAGTTGATTGTCCTCC 59.699 40.000 0.00 0.00 0.00 4.30
181 182 6.385649 TGGTTTTAACAGTTGATTGTCCTC 57.614 37.500 0.00 0.00 0.00 3.71
182 183 6.015434 GGATGGTTTTAACAGTTGATTGTCCT 60.015 38.462 0.00 0.00 0.00 3.85
183 184 6.156519 GGATGGTTTTAACAGTTGATTGTCC 58.843 40.000 0.00 0.00 0.00 4.02
184 185 6.744112 TGGATGGTTTTAACAGTTGATTGTC 58.256 36.000 0.00 0.00 0.00 3.18
185 186 6.723298 TGGATGGTTTTAACAGTTGATTGT 57.277 33.333 0.00 0.00 0.00 2.71
186 187 8.606040 AAATGGATGGTTTTAACAGTTGATTG 57.394 30.769 0.00 0.00 0.00 2.67
188 189 9.705290 GTTAAATGGATGGTTTTAACAGTTGAT 57.295 29.630 11.42 0.00 43.15 2.57
189 190 8.145122 GGTTAAATGGATGGTTTTAACAGTTGA 58.855 33.333 15.91 0.00 44.42 3.18
190 191 7.386573 GGGTTAAATGGATGGTTTTAACAGTTG 59.613 37.037 15.91 0.00 44.42 3.16
191 192 7.446769 GGGTTAAATGGATGGTTTTAACAGTT 58.553 34.615 15.91 0.00 44.42 3.16
192 193 6.014070 GGGGTTAAATGGATGGTTTTAACAGT 60.014 38.462 15.91 0.00 44.42 3.55
193 194 6.403049 GGGGTTAAATGGATGGTTTTAACAG 58.597 40.000 15.91 0.00 44.42 3.16
194 195 5.248705 GGGGGTTAAATGGATGGTTTTAACA 59.751 40.000 15.91 0.00 44.42 2.41
195 196 5.486063 AGGGGGTTAAATGGATGGTTTTAAC 59.514 40.000 8.90 8.90 43.03 2.01
196 197 5.666738 AGGGGGTTAAATGGATGGTTTTAA 58.333 37.500 0.00 0.00 0.00 1.52
197 198 5.274015 GAGGGGGTTAAATGGATGGTTTTA 58.726 41.667 0.00 0.00 0.00 1.52
198 199 4.101114 GAGGGGGTTAAATGGATGGTTTT 58.899 43.478 0.00 0.00 0.00 2.43
199 200 3.719871 GAGGGGGTTAAATGGATGGTTT 58.280 45.455 0.00 0.00 0.00 3.27
200 201 2.357777 CGAGGGGGTTAAATGGATGGTT 60.358 50.000 0.00 0.00 0.00 3.67
201 202 1.214424 CGAGGGGGTTAAATGGATGGT 59.786 52.381 0.00 0.00 0.00 3.55
202 203 1.478654 CCGAGGGGGTTAAATGGATGG 60.479 57.143 0.00 0.00 0.00 3.51
203 204 1.981256 CCGAGGGGGTTAAATGGATG 58.019 55.000 0.00 0.00 0.00 3.51
216 217 0.321653 CTCAGAAAACCACCCGAGGG 60.322 60.000 6.63 6.63 42.03 4.30
217 218 0.396811 ACTCAGAAAACCACCCGAGG 59.603 55.000 0.00 0.00 0.00 4.63
218 219 1.873591 CAACTCAGAAAACCACCCGAG 59.126 52.381 0.00 0.00 0.00 4.63
219 220 1.210967 ACAACTCAGAAAACCACCCGA 59.789 47.619 0.00 0.00 0.00 5.14
220 221 1.675552 ACAACTCAGAAAACCACCCG 58.324 50.000 0.00 0.00 0.00 5.28
221 222 4.465632 AAAACAACTCAGAAAACCACCC 57.534 40.909 0.00 0.00 0.00 4.61
222 223 5.234752 ACAAAAACAACTCAGAAAACCACC 58.765 37.500 0.00 0.00 0.00 4.61
223 224 5.060446 CGACAAAAACAACTCAGAAAACCAC 59.940 40.000 0.00 0.00 0.00 4.16
224 225 5.048643 TCGACAAAAACAACTCAGAAAACCA 60.049 36.000 0.00 0.00 0.00 3.67
225 226 5.285370 GTCGACAAAAACAACTCAGAAAACC 59.715 40.000 11.55 0.00 0.00 3.27
226 227 5.002189 CGTCGACAAAAACAACTCAGAAAAC 59.998 40.000 17.16 0.00 0.00 2.43
227 228 5.083389 CGTCGACAAAAACAACTCAGAAAA 58.917 37.500 17.16 0.00 0.00 2.29
228 229 4.152759 ACGTCGACAAAAACAACTCAGAAA 59.847 37.500 17.16 0.00 0.00 2.52
229 230 3.680937 ACGTCGACAAAAACAACTCAGAA 59.319 39.130 17.16 0.00 0.00 3.02
230 231 3.061563 CACGTCGACAAAAACAACTCAGA 59.938 43.478 17.16 0.00 0.00 3.27
231 232 3.342269 CACGTCGACAAAAACAACTCAG 58.658 45.455 17.16 0.00 0.00 3.35
232 233 2.094575 CCACGTCGACAAAAACAACTCA 59.905 45.455 17.16 0.00 0.00 3.41
233 234 2.700694 CCACGTCGACAAAAACAACTC 58.299 47.619 17.16 0.00 0.00 3.01
234 235 1.202098 GCCACGTCGACAAAAACAACT 60.202 47.619 17.16 0.00 0.00 3.16
235 236 1.185189 GCCACGTCGACAAAAACAAC 58.815 50.000 17.16 0.00 0.00 3.32
236 237 0.247735 CGCCACGTCGACAAAAACAA 60.248 50.000 17.16 0.00 0.00 2.83
237 238 1.348938 CGCCACGTCGACAAAAACA 59.651 52.632 17.16 0.00 0.00 2.83
238 239 2.001880 GCGCCACGTCGACAAAAAC 61.002 57.895 17.16 0.00 0.00 2.43
239 240 2.325166 GCGCCACGTCGACAAAAA 59.675 55.556 17.16 0.00 0.00 1.94
240 241 3.641986 GGCGCCACGTCGACAAAA 61.642 61.111 24.80 0.00 37.45 2.44
241 242 4.893601 TGGCGCCACGTCGACAAA 62.894 61.111 29.03 0.00 45.54 2.83
250 251 4.367023 TAGGTGACGTGGCGCCAC 62.367 66.667 43.07 43.07 39.36 5.01
251 252 4.063967 CTAGGTGACGTGGCGCCA 62.064 66.667 29.03 29.03 40.91 5.69
252 253 3.984200 GACTAGGTGACGTGGCGCC 62.984 68.421 22.73 22.73 38.73 6.53
253 254 2.506438 GACTAGGTGACGTGGCGC 60.506 66.667 0.00 0.00 0.00 6.53
254 255 1.945354 ATGGACTAGGTGACGTGGCG 61.945 60.000 0.00 0.00 0.00 5.69
255 256 0.460284 CATGGACTAGGTGACGTGGC 60.460 60.000 0.00 0.00 0.00 5.01
256 257 0.895530 ACATGGACTAGGTGACGTGG 59.104 55.000 0.00 0.00 0.00 4.94
257 258 1.404181 CCACATGGACTAGGTGACGTG 60.404 57.143 5.07 0.00 43.52 4.49
258 259 0.895530 CCACATGGACTAGGTGACGT 59.104 55.000 5.07 0.00 43.52 4.34
259 260 1.135139 CTCCACATGGACTAGGTGACG 59.865 57.143 5.07 0.00 43.52 4.35
260 261 2.093973 CACTCCACATGGACTAGGTGAC 60.094 54.545 5.07 0.00 43.52 3.67
261 262 2.179427 CACTCCACATGGACTAGGTGA 58.821 52.381 5.07 0.00 43.52 4.02
262 263 1.208052 CCACTCCACATGGACTAGGTG 59.792 57.143 9.87 9.87 39.78 4.00
263 264 1.573108 CCACTCCACATGGACTAGGT 58.427 55.000 0.00 0.00 39.78 3.08
264 265 0.833287 CCCACTCCACATGGACTAGG 59.167 60.000 0.00 0.00 39.78 3.02
265 266 0.833287 CCCCACTCCACATGGACTAG 59.167 60.000 0.00 0.00 39.78 2.57
266 267 0.118346 ACCCCACTCCACATGGACTA 59.882 55.000 0.00 0.00 39.78 2.59
267 268 1.151810 ACCCCACTCCACATGGACT 60.152 57.895 0.00 0.00 39.78 3.85
268 269 1.201429 AGACCCCACTCCACATGGAC 61.201 60.000 0.00 0.00 39.78 4.02
269 270 1.160870 AGACCCCACTCCACATGGA 59.839 57.895 0.00 0.00 43.08 3.41
270 271 1.200760 TCAGACCCCACTCCACATGG 61.201 60.000 0.00 0.00 36.94 3.66
271 272 0.251354 CTCAGACCCCACTCCACATG 59.749 60.000 0.00 0.00 0.00 3.21
272 273 0.178891 ACTCAGACCCCACTCCACAT 60.179 55.000 0.00 0.00 0.00 3.21
273 274 0.832135 GACTCAGACCCCACTCCACA 60.832 60.000 0.00 0.00 0.00 4.17
274 275 0.832135 TGACTCAGACCCCACTCCAC 60.832 60.000 0.00 0.00 0.00 4.02
275 276 0.542938 CTGACTCAGACCCCACTCCA 60.543 60.000 0.00 0.00 32.44 3.86
276 277 1.893919 GCTGACTCAGACCCCACTCC 61.894 65.000 10.45 0.00 32.44 3.85
277 278 1.188219 TGCTGACTCAGACCCCACTC 61.188 60.000 10.45 0.00 32.44 3.51
278 279 0.764369 TTGCTGACTCAGACCCCACT 60.764 55.000 10.45 0.00 32.44 4.00
279 280 0.321122 CTTGCTGACTCAGACCCCAC 60.321 60.000 10.45 0.00 32.44 4.61
280 281 1.483595 CCTTGCTGACTCAGACCCCA 61.484 60.000 10.45 0.00 32.44 4.96
281 282 1.298014 CCTTGCTGACTCAGACCCC 59.702 63.158 10.45 0.00 32.44 4.95
282 283 1.298014 CCCTTGCTGACTCAGACCC 59.702 63.158 10.45 0.00 32.44 4.46
283 284 1.194781 TCCCCTTGCTGACTCAGACC 61.195 60.000 10.45 0.00 32.44 3.85
284 285 0.908198 ATCCCCTTGCTGACTCAGAC 59.092 55.000 10.45 2.26 32.44 3.51
285 286 0.907486 CATCCCCTTGCTGACTCAGA 59.093 55.000 10.45 0.00 32.44 3.27
286 287 0.107312 CCATCCCCTTGCTGACTCAG 60.107 60.000 1.21 1.21 34.12 3.35
287 288 0.547471 TCCATCCCCTTGCTGACTCA 60.547 55.000 0.00 0.00 0.00 3.41
288 289 0.620556 TTCCATCCCCTTGCTGACTC 59.379 55.000 0.00 0.00 0.00 3.36
289 290 0.622665 CTTCCATCCCCTTGCTGACT 59.377 55.000 0.00 0.00 0.00 3.41
290 291 0.620556 TCTTCCATCCCCTTGCTGAC 59.379 55.000 0.00 0.00 0.00 3.51
291 292 0.914644 CTCTTCCATCCCCTTGCTGA 59.085 55.000 0.00 0.00 0.00 4.26
292 293 0.106819 CCTCTTCCATCCCCTTGCTG 60.107 60.000 0.00 0.00 0.00 4.41
293 294 0.253347 TCCTCTTCCATCCCCTTGCT 60.253 55.000 0.00 0.00 0.00 3.91
294 295 0.106967 GTCCTCTTCCATCCCCTTGC 60.107 60.000 0.00 0.00 0.00 4.01
295 296 1.211457 CTGTCCTCTTCCATCCCCTTG 59.789 57.143 0.00 0.00 0.00 3.61
296 297 1.589414 CTGTCCTCTTCCATCCCCTT 58.411 55.000 0.00 0.00 0.00 3.95
297 298 0.985490 GCTGTCCTCTTCCATCCCCT 60.985 60.000 0.00 0.00 0.00 4.79
298 299 1.274703 TGCTGTCCTCTTCCATCCCC 61.275 60.000 0.00 0.00 0.00 4.81
299 300 0.842635 ATGCTGTCCTCTTCCATCCC 59.157 55.000 0.00 0.00 0.00 3.85
300 301 1.767681 AGATGCTGTCCTCTTCCATCC 59.232 52.381 0.00 0.00 34.35 3.51
301 302 2.485124 CCAGATGCTGTCCTCTTCCATC 60.485 54.545 0.00 0.00 34.10 3.51
302 303 1.489649 CCAGATGCTGTCCTCTTCCAT 59.510 52.381 0.00 0.00 0.00 3.41
303 304 0.907486 CCAGATGCTGTCCTCTTCCA 59.093 55.000 0.00 0.00 0.00 3.53
304 305 0.908198 ACCAGATGCTGTCCTCTTCC 59.092 55.000 0.00 0.00 0.00 3.46
305 306 1.134551 GGACCAGATGCTGTCCTCTTC 60.135 57.143 1.51 0.00 32.76 2.87
306 307 0.908198 GGACCAGATGCTGTCCTCTT 59.092 55.000 1.51 0.00 32.76 2.85
307 308 0.042431 AGGACCAGATGCTGTCCTCT 59.958 55.000 5.39 0.00 37.40 3.69
308 309 0.463620 GAGGACCAGATGCTGTCCTC 59.536 60.000 19.52 19.52 43.73 3.71
309 310 1.326213 CGAGGACCAGATGCTGTCCT 61.326 60.000 10.79 10.79 41.25 3.85
310 311 1.142748 CGAGGACCAGATGCTGTCC 59.857 63.158 0.40 0.40 34.37 4.02
311 312 1.520342 GCGAGGACCAGATGCTGTC 60.520 63.158 0.00 0.00 0.00 3.51
312 313 2.581354 GCGAGGACCAGATGCTGT 59.419 61.111 0.00 0.00 0.00 4.40
313 314 2.202987 GGCGAGGACCAGATGCTG 60.203 66.667 0.00 0.00 0.00 4.41
314 315 3.842923 CGGCGAGGACCAGATGCT 61.843 66.667 0.00 0.00 0.00 3.79
336 337 3.177272 CTTGCGATGCAGGATGGCG 62.177 63.158 4.48 0.00 40.61 5.69
337 338 1.820906 TCTTGCGATGCAGGATGGC 60.821 57.895 1.65 1.65 39.64 4.40
338 339 1.442526 GGTCTTGCGATGCAGGATGG 61.443 60.000 6.88 0.00 45.67 3.51
339 340 0.745486 TGGTCTTGCGATGCAGGATG 60.745 55.000 6.88 0.00 45.67 3.51
340 341 0.035152 TTGGTCTTGCGATGCAGGAT 60.035 50.000 6.88 0.00 45.67 3.24
341 342 0.955428 GTTGGTCTTGCGATGCAGGA 60.955 55.000 0.00 0.00 42.16 3.86
342 343 1.503542 GTTGGTCTTGCGATGCAGG 59.496 57.895 0.00 0.00 40.61 4.85
343 344 0.957395 AGGTTGGTCTTGCGATGCAG 60.957 55.000 0.00 0.00 40.61 4.41
344 345 0.955428 GAGGTTGGTCTTGCGATGCA 60.955 55.000 0.00 0.00 36.47 3.96
345 346 1.648467 GGAGGTTGGTCTTGCGATGC 61.648 60.000 0.00 0.00 0.00 3.91
346 347 0.036010 AGGAGGTTGGTCTTGCGATG 60.036 55.000 0.00 0.00 0.00 3.84
347 348 0.036010 CAGGAGGTTGGTCTTGCGAT 60.036 55.000 0.00 0.00 0.00 4.58
348 349 1.371183 CAGGAGGTTGGTCTTGCGA 59.629 57.895 0.00 0.00 0.00 5.10
349 350 2.328099 GCAGGAGGTTGGTCTTGCG 61.328 63.158 0.00 0.00 39.44 4.85
350 351 1.228245 TGCAGGAGGTTGGTCTTGC 60.228 57.895 1.31 1.31 46.85 4.01
351 352 0.607489 CCTGCAGGAGGTTGGTCTTG 60.607 60.000 29.88 0.00 37.02 3.02
352 353 0.768221 TCCTGCAGGAGGTTGGTCTT 60.768 55.000 32.00 0.00 43.37 3.01
353 354 1.152030 TCCTGCAGGAGGTTGGTCT 60.152 57.895 32.00 0.00 43.37 3.85
354 355 1.003233 GTCCTGCAGGAGGTTGGTC 60.003 63.158 35.92 18.18 46.49 4.02
355 356 2.883828 CGTCCTGCAGGAGGTTGGT 61.884 63.158 36.52 0.00 46.49 3.67
356 357 2.046892 CGTCCTGCAGGAGGTTGG 60.047 66.667 36.52 20.71 46.49 3.77
361 362 2.179517 GACGACGTCCTGCAGGAG 59.820 66.667 35.92 28.18 46.49 3.69
362 363 3.733960 CGACGACGTCCTGCAGGA 61.734 66.667 32.00 32.00 43.08 3.86
374 375 1.430632 GTTAGGATGGCGACGACGA 59.569 57.895 12.29 0.00 42.66 4.20
375 376 1.588139 GGTTAGGATGGCGACGACG 60.588 63.158 2.12 2.12 42.93 5.12
376 377 1.227176 GGGTTAGGATGGCGACGAC 60.227 63.158 0.00 0.00 0.00 4.34
377 378 1.046472 ATGGGTTAGGATGGCGACGA 61.046 55.000 0.00 0.00 0.00 4.20
378 379 0.880278 CATGGGTTAGGATGGCGACG 60.880 60.000 0.00 0.00 0.00 5.12
379 380 0.180406 ACATGGGTTAGGATGGCGAC 59.820 55.000 0.00 0.00 0.00 5.19
380 381 0.916086 AACATGGGTTAGGATGGCGA 59.084 50.000 0.00 0.00 34.87 5.54
381 382 1.134098 AGAACATGGGTTAGGATGGCG 60.134 52.381 0.00 0.00 37.36 5.69
382 383 2.301346 CAGAACATGGGTTAGGATGGC 58.699 52.381 0.00 0.00 37.36 4.40
383 384 2.092212 AGCAGAACATGGGTTAGGATGG 60.092 50.000 0.00 0.00 37.36 3.51
384 385 3.209410 GAGCAGAACATGGGTTAGGATG 58.791 50.000 0.00 0.00 37.36 3.51
385 386 2.173569 GGAGCAGAACATGGGTTAGGAT 59.826 50.000 0.00 0.00 37.36 3.24
386 387 1.559682 GGAGCAGAACATGGGTTAGGA 59.440 52.381 0.00 0.00 37.36 2.94
387 388 1.408822 GGGAGCAGAACATGGGTTAGG 60.409 57.143 0.00 0.00 37.36 2.69
388 389 1.281867 TGGGAGCAGAACATGGGTTAG 59.718 52.381 0.00 0.00 37.36 2.34
389 390 1.367346 TGGGAGCAGAACATGGGTTA 58.633 50.000 0.00 0.00 37.36 2.85
390 391 0.706433 ATGGGAGCAGAACATGGGTT 59.294 50.000 0.00 0.00 40.76 4.11
391 392 0.033796 CATGGGAGCAGAACATGGGT 60.034 55.000 0.00 0.00 38.58 4.51
392 393 2.803203 CATGGGAGCAGAACATGGG 58.197 57.895 0.00 0.00 38.58 4.00
394 395 2.803203 CCCATGGGAGCAGAACATG 58.197 57.895 28.27 0.00 41.15 3.21
422 423 3.371097 ATAGCAGGCGTGTCCACCG 62.371 63.158 8.40 0.00 37.29 4.94
423 424 1.815421 CATAGCAGGCGTGTCCACC 60.815 63.158 8.40 0.00 37.29 4.61
424 425 1.815421 CCATAGCAGGCGTGTCCAC 60.815 63.158 8.40 0.00 37.29 4.02
425 426 2.584064 CCATAGCAGGCGTGTCCA 59.416 61.111 8.40 0.00 37.29 4.02
426 427 2.897350 GCCATAGCAGGCGTGTCC 60.897 66.667 8.40 0.00 46.12 4.02
434 435 4.569023 TCGCCGTCGCCATAGCAG 62.569 66.667 0.00 0.00 39.83 4.24
435 436 4.569023 CTCGCCGTCGCCATAGCA 62.569 66.667 0.00 0.00 39.83 3.49
437 438 3.544167 CTCCTCGCCGTCGCCATAG 62.544 68.421 0.00 0.00 35.26 2.23
438 439 3.592814 CTCCTCGCCGTCGCCATA 61.593 66.667 0.00 0.00 35.26 2.74
448 449 1.308783 CCAAAAGAAGGGCTCCTCGC 61.309 60.000 0.00 0.00 30.89 5.03
449 450 0.678048 CCCAAAAGAAGGGCTCCTCG 60.678 60.000 0.00 0.00 39.96 4.63
450 451 3.272925 CCCAAAAGAAGGGCTCCTC 57.727 57.895 0.00 0.00 39.96 3.71
457 458 2.931068 GCGGTGGCCCAAAAGAAGG 61.931 63.158 0.00 0.00 0.00 3.46
458 459 2.146073 CTGCGGTGGCCCAAAAGAAG 62.146 60.000 0.00 0.00 38.85 2.85
459 460 2.123683 TGCGGTGGCCCAAAAGAA 60.124 55.556 0.00 0.00 38.85 2.52
460 461 2.597217 CTGCGGTGGCCCAAAAGA 60.597 61.111 0.00 0.00 38.85 2.52
461 462 4.362476 GCTGCGGTGGCCCAAAAG 62.362 66.667 0.00 0.00 38.85 2.27
479 480 3.536917 TAGCCACCGGGAGATGCG 61.537 66.667 6.32 0.00 35.59 4.73
480 481 2.109181 GTAGCCACCGGGAGATGC 59.891 66.667 6.32 0.00 35.59 3.91
481 482 1.443407 CAGTAGCCACCGGGAGATG 59.557 63.158 6.32 0.00 35.59 2.90
482 483 2.435693 GCAGTAGCCACCGGGAGAT 61.436 63.158 6.32 0.00 35.59 2.75
483 484 3.075005 GCAGTAGCCACCGGGAGA 61.075 66.667 6.32 0.00 35.59 3.71
484 485 3.077556 AGCAGTAGCCACCGGGAG 61.078 66.667 6.32 0.00 43.56 4.30
485 486 3.075005 GAGCAGTAGCCACCGGGA 61.075 66.667 6.32 0.00 43.56 5.14
486 487 4.514577 CGAGCAGTAGCCACCGGG 62.515 72.222 6.32 0.00 43.56 5.73
487 488 3.701604 GACGAGCAGTAGCCACCGG 62.702 68.421 0.00 0.00 43.56 5.28
488 489 2.202623 GACGAGCAGTAGCCACCG 60.203 66.667 0.00 0.00 43.56 4.94
489 490 0.737715 CAAGACGAGCAGTAGCCACC 60.738 60.000 0.00 0.00 43.56 4.61
490 491 0.737715 CCAAGACGAGCAGTAGCCAC 60.738 60.000 0.00 0.00 43.56 5.01
491 492 1.591703 CCAAGACGAGCAGTAGCCA 59.408 57.895 0.00 0.00 43.56 4.75
492 493 1.153549 CCCAAGACGAGCAGTAGCC 60.154 63.158 0.00 0.00 43.56 3.93
493 494 1.811679 GCCCAAGACGAGCAGTAGC 60.812 63.158 0.00 0.00 42.56 3.58
494 495 1.153549 GGCCCAAGACGAGCAGTAG 60.154 63.158 0.00 0.00 0.00 2.57
495 496 2.978824 GGCCCAAGACGAGCAGTA 59.021 61.111 0.00 0.00 0.00 2.74
496 497 4.379243 CGGCCCAAGACGAGCAGT 62.379 66.667 0.00 0.00 0.00 4.40
504 505 4.838152 GAGATGCGCGGCCCAAGA 62.838 66.667 8.83 0.00 0.00 3.02
515 516 2.894387 GCTCACGCCAGGAGATGC 60.894 66.667 0.00 0.00 34.24 3.91
516 517 2.584418 CGCTCACGCCAGGAGATG 60.584 66.667 0.00 0.00 34.24 2.90
517 518 3.842923 CCGCTCACGCCAGGAGAT 61.843 66.667 0.00 0.00 38.22 2.75
522 523 2.279502 TAAGTAGCCGCTCACGCCAG 62.280 60.000 0.00 0.00 38.22 4.85
523 524 2.279502 CTAAGTAGCCGCTCACGCCA 62.280 60.000 0.00 0.00 38.22 5.69
524 525 1.589196 CTAAGTAGCCGCTCACGCC 60.589 63.158 0.00 0.00 38.22 5.68
525 526 1.589196 CCTAAGTAGCCGCTCACGC 60.589 63.158 0.00 0.00 38.22 5.34
526 527 0.525668 CACCTAAGTAGCCGCTCACG 60.526 60.000 0.00 0.00 39.67 4.35
527 528 0.179108 CCACCTAAGTAGCCGCTCAC 60.179 60.000 0.00 0.00 0.00 3.51
528 529 0.323999 TCCACCTAAGTAGCCGCTCA 60.324 55.000 0.00 0.00 0.00 4.26
529 530 0.386113 CTCCACCTAAGTAGCCGCTC 59.614 60.000 0.00 0.00 0.00 5.03
530 531 1.043673 CCTCCACCTAAGTAGCCGCT 61.044 60.000 0.00 0.00 0.00 5.52
531 532 1.442148 CCTCCACCTAAGTAGCCGC 59.558 63.158 0.00 0.00 0.00 6.53
532 533 1.043673 AGCCTCCACCTAAGTAGCCG 61.044 60.000 0.00 0.00 0.00 5.52
533 534 0.753867 GAGCCTCCACCTAAGTAGCC 59.246 60.000 0.00 0.00 0.00 3.93
534 535 1.410882 CTGAGCCTCCACCTAAGTAGC 59.589 57.143 0.00 0.00 0.00 3.58
535 536 1.410882 GCTGAGCCTCCACCTAAGTAG 59.589 57.143 0.00 0.00 0.00 2.57
536 537 1.486211 GCTGAGCCTCCACCTAAGTA 58.514 55.000 0.00 0.00 0.00 2.24
537 538 1.268283 GGCTGAGCCTCCACCTAAGT 61.268 60.000 17.96 0.00 46.69 2.24
538 539 1.524482 GGCTGAGCCTCCACCTAAG 59.476 63.158 17.96 0.00 46.69 2.18
539 540 3.727387 GGCTGAGCCTCCACCTAA 58.273 61.111 17.96 0.00 46.69 2.69
549 550 2.360475 GGAGGTTGGTGGCTGAGC 60.360 66.667 0.00 0.00 0.00 4.26
550 551 2.046892 CGGAGGTTGGTGGCTGAG 60.047 66.667 0.00 0.00 0.00 3.35
574 575 3.665675 CTTTCCCTCTCGCCCACCG 62.666 68.421 0.00 0.00 38.61 4.94
575 576 2.269241 CTTTCCCTCTCGCCCACC 59.731 66.667 0.00 0.00 0.00 4.61
576 577 2.269241 CCTTTCCCTCTCGCCCAC 59.731 66.667 0.00 0.00 0.00 4.61
577 578 3.009115 CCCTTTCCCTCTCGCCCA 61.009 66.667 0.00 0.00 0.00 5.36
578 579 2.687566 TCCCTTTCCCTCTCGCCC 60.688 66.667 0.00 0.00 0.00 6.13
579 580 2.904131 CTCCCTTTCCCTCTCGCC 59.096 66.667 0.00 0.00 0.00 5.54
580 581 2.188207 GCTCCCTTTCCCTCTCGC 59.812 66.667 0.00 0.00 0.00 5.03
581 582 2.736826 GGGCTCCCTTTCCCTCTCG 61.737 68.421 0.00 0.00 39.46 4.04
582 583 0.990818 ATGGGCTCCCTTTCCCTCTC 60.991 60.000 6.50 0.00 43.04 3.20
583 584 1.085605 ATGGGCTCCCTTTCCCTCT 59.914 57.895 6.50 0.00 43.04 3.69
584 585 1.228510 CATGGGCTCCCTTTCCCTC 59.771 63.158 6.50 0.00 43.04 4.30
585 586 2.319762 CCATGGGCTCCCTTTCCCT 61.320 63.158 2.85 0.00 43.04 4.20
586 587 2.280079 CCATGGGCTCCCTTTCCC 59.720 66.667 2.85 0.00 42.93 3.97
587 588 2.442830 GCCATGGGCTCCCTTTCC 60.443 66.667 15.13 0.00 46.69 3.13
611 612 1.153823 CCGTTCTCACTGGCCGTAG 60.154 63.158 0.00 0.00 0.00 3.51
612 613 2.642254 CCCGTTCTCACTGGCCGTA 61.642 63.158 0.00 0.00 0.00 4.02
613 614 4.003788 CCCGTTCTCACTGGCCGT 62.004 66.667 0.00 0.00 0.00 5.68
614 615 4.760047 CCCCGTTCTCACTGGCCG 62.760 72.222 0.00 0.00 0.00 6.13
617 618 2.484287 ATTGGCCCCGTTCTCACTGG 62.484 60.000 0.00 0.00 0.00 4.00
618 619 0.251916 TATTGGCCCCGTTCTCACTG 59.748 55.000 0.00 0.00 0.00 3.66
619 620 0.541863 CTATTGGCCCCGTTCTCACT 59.458 55.000 0.00 0.00 0.00 3.41
620 621 1.095807 GCTATTGGCCCCGTTCTCAC 61.096 60.000 0.00 0.00 34.27 3.51
621 622 1.223487 GCTATTGGCCCCGTTCTCA 59.777 57.895 0.00 0.00 34.27 3.27
622 623 0.533085 GAGCTATTGGCCCCGTTCTC 60.533 60.000 0.00 0.00 43.05 2.87
623 624 1.271840 TGAGCTATTGGCCCCGTTCT 61.272 55.000 0.00 0.00 43.05 3.01
624 625 0.179018 ATGAGCTATTGGCCCCGTTC 60.179 55.000 0.00 0.00 43.05 3.95
625 626 0.466189 CATGAGCTATTGGCCCCGTT 60.466 55.000 0.00 0.00 43.05 4.44
626 627 1.149174 CATGAGCTATTGGCCCCGT 59.851 57.895 0.00 0.00 43.05 5.28
714 715 2.917933 TGGAGCTATTGTTGGATTCGG 58.082 47.619 0.00 0.00 0.00 4.30
719 720 2.016318 CGCATTGGAGCTATTGTTGGA 58.984 47.619 0.00 0.00 0.00 3.53
931 980 1.677490 GGAAAGGAAAGGGGTAGGGA 58.323 55.000 0.00 0.00 0.00 4.20
936 985 0.704813 AGGTGGGAAAGGAAAGGGGT 60.705 55.000 0.00 0.00 0.00 4.95
992 1046 0.660488 CGAGCTAGACATCACTCGCT 59.340 55.000 0.00 0.00 44.56 4.93
1128 1197 3.518419 AAACTCGCGCCCACGGTTA 62.518 57.895 0.00 0.00 40.57 2.85
1204 1283 3.314693 TCGGGAGAAATTAGGCCATAGT 58.685 45.455 5.01 0.00 34.75 2.12
1211 1294 6.122964 AGGAAAGAAATCGGGAGAAATTAGG 58.877 40.000 0.00 0.00 45.37 2.69
1253 1337 2.230653 CCACCACCCAGATCCACCA 61.231 63.158 0.00 0.00 0.00 4.17
1299 1392 5.646577 TTTCTTCCGAACCTGAAAAACAA 57.353 34.783 0.00 0.00 0.00 2.83
1488 1589 3.057033 CAGATGCTTTAGTTGCTTGCCTT 60.057 43.478 0.00 0.00 0.00 4.35
1489 1590 2.490903 CAGATGCTTTAGTTGCTTGCCT 59.509 45.455 0.00 0.00 0.00 4.75
1884 1999 4.678256 TGGTCTTGGGCATGGTTATTTTA 58.322 39.130 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.