Multiple sequence alignment - TraesCS2D01G162700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G162700 chr2D 100.000 2375 0 0 1 2375 106999505 107001879 0.000000e+00 4386
1 TraesCS2D01G162700 chr2D 99.593 491 2 0 1885 2375 107006837 107007327 0.000000e+00 896
2 TraesCS2D01G162700 chr2D 99.394 495 2 1 1881 2375 234349375 234348882 0.000000e+00 896
3 TraesCS2D01G162700 chr2D 99.795 488 1 0 1888 2375 284515111 284514624 0.000000e+00 896
4 TraesCS2D01G162700 chr2A 92.714 1702 73 22 22 1687 103363231 103364917 0.000000e+00 2409
5 TraesCS2D01G162700 chr2A 92.614 176 9 4 1713 1888 103364916 103365087 1.410000e-62 250
6 TraesCS2D01G162700 chr2B 94.753 1315 35 13 587 1888 157313998 157315291 0.000000e+00 2015
7 TraesCS2D01G162700 chr7D 99.796 490 1 0 1886 2375 351659838 351660327 0.000000e+00 900
8 TraesCS2D01G162700 chr5D 99.594 493 1 1 1883 2375 457555862 457556353 0.000000e+00 898
9 TraesCS2D01G162700 chr5D 99.593 491 2 0 1885 2375 457561329 457561819 0.000000e+00 896
10 TraesCS2D01G162700 chr4D 99.593 491 2 0 1885 2375 445334814 445335304 0.000000e+00 896
11 TraesCS2D01G162700 chr3D 99.593 491 2 0 1885 2375 67009025 67009515 0.000000e+00 896
12 TraesCS2D01G162700 chr3D 99.795 488 1 0 1888 2375 515545054 515544567 0.000000e+00 896
13 TraesCS2D01G162700 chr3D 85.385 650 67 10 839 1477 101861132 101860500 0.000000e+00 649
14 TraesCS2D01G162700 chr3B 83.484 775 67 23 746 1477 152878523 152877767 0.000000e+00 665
15 TraesCS2D01G162700 chr3B 80.836 287 43 11 1524 1807 790758886 790759163 5.140000e-52 215
16 TraesCS2D01G162700 chr3A 85.565 575 53 16 831 1392 554017883 554018440 2.050000e-160 575
17 TraesCS2D01G162700 chr1A 92.486 173 13 0 1209 1381 536930769 536930597 5.070000e-62 248
18 TraesCS2D01G162700 chr1B 89.119 193 20 1 1201 1392 598925999 598926191 3.050000e-59 239
19 TraesCS2D01G162700 chr6B 80.597 268 40 7 1526 1788 679586040 679586300 1.860000e-46 196
20 TraesCS2D01G162700 chr6B 80.597 268 40 7 1526 1788 679601619 679601879 1.860000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G162700 chr2D 106999505 107001879 2374 False 4386.0 4386 100.000 1 2375 1 chr2D.!!$F1 2374
1 TraesCS2D01G162700 chr2A 103363231 103365087 1856 False 1329.5 2409 92.664 22 1888 2 chr2A.!!$F1 1866
2 TraesCS2D01G162700 chr2B 157313998 157315291 1293 False 2015.0 2015 94.753 587 1888 1 chr2B.!!$F1 1301
3 TraesCS2D01G162700 chr3D 101860500 101861132 632 True 649.0 649 85.385 839 1477 1 chr3D.!!$R1 638
4 TraesCS2D01G162700 chr3B 152877767 152878523 756 True 665.0 665 83.484 746 1477 1 chr3B.!!$R1 731
5 TraesCS2D01G162700 chr3A 554017883 554018440 557 False 575.0 575 85.565 831 1392 1 chr3A.!!$F1 561


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 464 0.03759 AGGCATAAACAGGTTGCGGA 59.962 50.0 0.0 0.0 37.25 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2162 0.031449 TCGTCATCAACACTGTCGCA 59.969 50.0 0.0 0.0 0.0 5.1 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.019174 AGGTTTATCATTGTGAAGCCCTG 58.981 43.478 3.74 0.00 0.00 4.45
35 36 1.073284 TGAAGCCCTGTGGAGTTAACC 59.927 52.381 0.88 0.00 0.00 2.85
101 104 0.824109 CTACTGACGGGGATTCTGCA 59.176 55.000 0.00 0.00 0.00 4.41
104 107 1.303309 CTGACGGGGATTCTGCATTC 58.697 55.000 0.00 0.00 0.00 2.67
106 109 1.281867 TGACGGGGATTCTGCATTCTT 59.718 47.619 0.00 0.00 0.00 2.52
107 110 2.503765 TGACGGGGATTCTGCATTCTTA 59.496 45.455 0.00 0.00 0.00 2.10
108 111 3.136443 TGACGGGGATTCTGCATTCTTAT 59.864 43.478 0.00 0.00 0.00 1.73
109 112 4.346709 TGACGGGGATTCTGCATTCTTATA 59.653 41.667 0.00 0.00 0.00 0.98
110 113 5.013079 TGACGGGGATTCTGCATTCTTATAT 59.987 40.000 0.00 0.00 0.00 0.86
111 114 6.212589 TGACGGGGATTCTGCATTCTTATATA 59.787 38.462 0.00 0.00 0.00 0.86
112 115 6.644347 ACGGGGATTCTGCATTCTTATATAG 58.356 40.000 0.00 0.00 0.00 1.31
114 117 6.127054 CGGGGATTCTGCATTCTTATATAGGA 60.127 42.308 0.00 0.00 0.00 2.94
115 118 7.278875 GGGGATTCTGCATTCTTATATAGGAG 58.721 42.308 0.00 0.00 0.00 3.69
117 120 8.982723 GGGATTCTGCATTCTTATATAGGAGTA 58.017 37.037 0.00 0.00 0.00 2.59
169 172 2.563942 GCGTTGGCAAATGGCGTA 59.436 55.556 0.00 0.00 46.16 4.42
170 173 1.514014 GCGTTGGCAAATGGCGTAG 60.514 57.895 0.00 0.00 46.16 3.51
172 175 0.519519 CGTTGGCAAATGGCGTAGAA 59.480 50.000 0.00 0.00 46.16 2.10
174 177 2.791158 CGTTGGCAAATGGCGTAGAATC 60.791 50.000 0.00 0.00 46.16 2.52
175 178 2.121291 TGGCAAATGGCGTAGAATCA 57.879 45.000 2.36 0.00 46.16 2.57
195 206 4.326826 TCAAGGTTTCCAGTATGCTCAAG 58.673 43.478 0.00 0.00 31.97 3.02
215 226 4.934797 AGATTGGAGTGGAATTTCTGGA 57.065 40.909 0.00 0.00 0.00 3.86
221 233 2.154462 AGTGGAATTTCTGGAGTTGCG 58.846 47.619 0.00 0.00 0.00 4.85
241 253 3.616560 GCGTGTCTGGAATCCTTGAACTA 60.617 47.826 0.00 0.00 0.00 2.24
244 256 5.305585 GTGTCTGGAATCCTTGAACTACAA 58.694 41.667 0.00 0.00 36.97 2.41
317 329 3.441163 TCGTCCGAATTAGATCAAACGG 58.559 45.455 0.00 0.00 39.72 4.44
321 333 2.561569 CGAATTAGATCAAACGGGCCT 58.438 47.619 0.84 0.00 0.00 5.19
322 334 2.287915 CGAATTAGATCAAACGGGCCTG 59.712 50.000 11.02 11.02 0.00 4.85
333 345 1.377725 CGGGCCTGGATCCATATGC 60.378 63.158 16.63 17.57 0.00 3.14
345 357 8.859090 CCTGGATCCATATGCAAATTAAACTTA 58.141 33.333 16.63 0.00 32.50 2.24
364 376 8.924511 AAACTTAGGATCCATAATACACATGG 57.075 34.615 15.82 0.00 43.74 3.66
443 455 7.791029 TCATAGAGTTACATCAGGCATAAACA 58.209 34.615 0.00 0.00 0.00 2.83
444 456 7.928167 TCATAGAGTTACATCAGGCATAAACAG 59.072 37.037 0.00 0.00 0.00 3.16
446 458 5.045578 AGAGTTACATCAGGCATAAACAGGT 60.046 40.000 0.00 0.00 0.00 4.00
448 460 5.415701 AGTTACATCAGGCATAAACAGGTTG 59.584 40.000 0.00 0.00 0.00 3.77
449 461 2.493278 ACATCAGGCATAAACAGGTTGC 59.507 45.455 0.00 0.00 35.64 4.17
450 462 1.164411 TCAGGCATAAACAGGTTGCG 58.836 50.000 0.00 0.00 37.25 4.85
452 464 0.037590 AGGCATAAACAGGTTGCGGA 59.962 50.000 0.00 0.00 37.25 5.54
453 465 1.102978 GGCATAAACAGGTTGCGGAT 58.897 50.000 0.00 0.00 37.25 4.18
497 509 1.337260 GCAGCCTCGTCTCTTTCTTCA 60.337 52.381 0.00 0.00 0.00 3.02
503 515 0.790814 CGTCTCTTTCTTCAACGGCC 59.209 55.000 0.00 0.00 0.00 6.13
506 518 0.512952 CTCTTTCTTCAACGGCCGTG 59.487 55.000 34.95 24.92 0.00 4.94
526 538 2.172505 TGTCTTCAGTTGCCTCTTTCCA 59.827 45.455 0.00 0.00 0.00 3.53
695 725 3.305813 CCACATGTCACGTACTAGTGGTT 60.306 47.826 5.39 0.00 43.16 3.67
709 739 2.318908 AGTGGTTAGTGGACACCGTAA 58.681 47.619 0.00 0.00 35.60 3.18
928 979 0.045469 AAGAAGGCAGGGAGGGATCT 59.955 55.000 0.00 0.00 0.00 2.75
1417 1496 4.424430 CTTGCGCACGTACGGCAC 62.424 66.667 21.06 14.03 36.23 5.01
1486 1567 8.485591 GTGCGATCACCTAATTACTAATTGTAC 58.514 37.037 4.52 0.00 37.24 2.90
1513 1596 2.472059 CGCCCGTGCATTGCTACAT 61.472 57.895 10.49 0.00 37.32 2.29
1592 1675 3.896888 TCATGGCTTGTCCTTTTTGTCAT 59.103 39.130 0.00 0.00 35.26 3.06
1593 1676 4.022068 TCATGGCTTGTCCTTTTTGTCATC 60.022 41.667 0.00 0.00 35.26 2.92
1594 1677 3.295093 TGGCTTGTCCTTTTTGTCATCA 58.705 40.909 0.00 0.00 35.26 3.07
1605 1688 5.119279 CCTTTTTGTCATCACGAGACTACTG 59.881 44.000 0.00 0.00 36.94 2.74
1641 1724 6.715347 AGCTTCACATTAACCCCAATTATC 57.285 37.500 0.00 0.00 0.00 1.75
1690 1773 6.177648 CTTGATAACAATTGCGTGGAGCTTC 61.178 44.000 5.05 0.00 39.98 3.86
1718 1801 6.289064 AGTCGTGGACTTTAAAGAAGACAAT 58.711 36.000 21.92 0.00 40.28 2.71
1723 1806 6.851330 GTGGACTTTAAAGAAGACAATGAACG 59.149 38.462 21.92 0.00 0.00 3.95
1788 1871 0.109132 CTTGGGGCACAATTTCGCTC 60.109 55.000 0.92 0.00 38.65 5.03
1789 1872 0.539438 TTGGGGCACAATTTCGCTCT 60.539 50.000 0.00 0.00 33.18 4.09
1790 1873 0.960364 TGGGGCACAATTTCGCTCTC 60.960 55.000 0.00 0.00 0.00 3.20
1866 1949 6.812656 TCCAACGAATTTAACGACTGCTATTA 59.187 34.615 0.00 0.00 34.70 0.98
1868 1951 8.120465 CCAACGAATTTAACGACTGCTATTATT 58.880 33.333 0.00 0.00 34.70 1.40
1893 1976 9.513906 TTATTTTTAGTGATGATGAGTGTTGGA 57.486 29.630 0.00 0.00 0.00 3.53
1894 1977 7.815840 TTTTTAGTGATGATGAGTGTTGGAA 57.184 32.000 0.00 0.00 0.00 3.53
1895 1978 8.408043 TTTTTAGTGATGATGAGTGTTGGAAT 57.592 30.769 0.00 0.00 0.00 3.01
1896 1979 9.513906 TTTTTAGTGATGATGAGTGTTGGAATA 57.486 29.630 0.00 0.00 0.00 1.75
1897 1980 9.685276 TTTTAGTGATGATGAGTGTTGGAATAT 57.315 29.630 0.00 0.00 0.00 1.28
1898 1981 9.685276 TTTAGTGATGATGAGTGTTGGAATATT 57.315 29.630 0.00 0.00 0.00 1.28
1900 1983 8.899427 AGTGATGATGAGTGTTGGAATATTAG 57.101 34.615 0.00 0.00 0.00 1.73
1901 1984 7.935755 AGTGATGATGAGTGTTGGAATATTAGG 59.064 37.037 0.00 0.00 0.00 2.69
1902 1985 6.712095 TGATGATGAGTGTTGGAATATTAGGC 59.288 38.462 0.00 0.00 0.00 3.93
1903 1986 6.000246 TGATGAGTGTTGGAATATTAGGCA 58.000 37.500 0.00 0.00 0.00 4.75
1904 1987 6.422333 TGATGAGTGTTGGAATATTAGGCAA 58.578 36.000 0.00 0.00 0.00 4.52
1905 1988 6.543465 TGATGAGTGTTGGAATATTAGGCAAG 59.457 38.462 0.00 0.00 0.00 4.01
1906 1989 5.815581 TGAGTGTTGGAATATTAGGCAAGT 58.184 37.500 0.00 0.00 0.00 3.16
1907 1990 6.245408 TGAGTGTTGGAATATTAGGCAAGTT 58.755 36.000 0.00 0.00 0.00 2.66
1908 1991 6.374333 TGAGTGTTGGAATATTAGGCAAGTTC 59.626 38.462 0.00 0.00 0.00 3.01
1909 1992 6.245408 AGTGTTGGAATATTAGGCAAGTTCA 58.755 36.000 0.00 0.00 0.00 3.18
1910 1993 6.891908 AGTGTTGGAATATTAGGCAAGTTCAT 59.108 34.615 0.00 0.00 0.00 2.57
1911 1994 6.974622 GTGTTGGAATATTAGGCAAGTTCATG 59.025 38.462 0.00 0.00 0.00 3.07
1912 1995 6.889177 TGTTGGAATATTAGGCAAGTTCATGA 59.111 34.615 0.00 0.00 0.00 3.07
1913 1996 7.560991 TGTTGGAATATTAGGCAAGTTCATGAT 59.439 33.333 0.00 0.00 0.00 2.45
1914 1997 8.416329 GTTGGAATATTAGGCAAGTTCATGATT 58.584 33.333 0.00 0.00 0.00 2.57
1915 1998 9.639563 TTGGAATATTAGGCAAGTTCATGATTA 57.360 29.630 0.00 0.00 0.00 1.75
1916 1999 9.639563 TGGAATATTAGGCAAGTTCATGATTAA 57.360 29.630 0.00 0.00 0.00 1.40
1921 2004 7.953005 TTAGGCAAGTTCATGATTAATTCCA 57.047 32.000 0.00 0.00 0.00 3.53
1922 2005 6.461110 AGGCAAGTTCATGATTAATTCCAG 57.539 37.500 0.00 0.00 0.00 3.86
1923 2006 5.954150 AGGCAAGTTCATGATTAATTCCAGT 59.046 36.000 0.00 0.00 0.00 4.00
1924 2007 7.118723 AGGCAAGTTCATGATTAATTCCAGTA 58.881 34.615 0.00 0.00 0.00 2.74
1925 2008 7.615365 AGGCAAGTTCATGATTAATTCCAGTAA 59.385 33.333 0.00 0.00 0.00 2.24
1926 2009 8.250332 GGCAAGTTCATGATTAATTCCAGTAAA 58.750 33.333 0.00 0.00 0.00 2.01
1927 2010 9.807649 GCAAGTTCATGATTAATTCCAGTAAAT 57.192 29.630 0.00 0.00 0.00 1.40
1944 2027 9.434275 TCCAGTAAATAATCCATGACTAGAAGA 57.566 33.333 0.00 0.00 0.00 2.87
1945 2028 9.703892 CCAGTAAATAATCCATGACTAGAAGAG 57.296 37.037 0.00 0.00 0.00 2.85
1953 2036 7.938140 ATCCATGACTAGAAGAGATACTAGC 57.062 40.000 0.00 0.00 39.47 3.42
1954 2037 6.842676 TCCATGACTAGAAGAGATACTAGCA 58.157 40.000 0.00 0.00 39.47 3.49
1955 2038 7.465960 TCCATGACTAGAAGAGATACTAGCAT 58.534 38.462 0.00 0.00 39.47 3.79
1956 2039 7.392953 TCCATGACTAGAAGAGATACTAGCATG 59.607 40.741 19.10 19.10 42.34 4.06
1957 2040 6.567687 TGACTAGAAGAGATACTAGCATGC 57.432 41.667 10.51 10.51 39.47 4.06
1958 2041 6.064717 TGACTAGAAGAGATACTAGCATGCA 58.935 40.000 21.98 5.01 39.47 3.96
1959 2042 6.547510 TGACTAGAAGAGATACTAGCATGCAA 59.452 38.462 21.98 2.20 39.47 4.08
1960 2043 7.232330 TGACTAGAAGAGATACTAGCATGCAAT 59.768 37.037 21.98 7.51 39.47 3.56
1961 2044 8.642935 ACTAGAAGAGATACTAGCATGCAATA 57.357 34.615 21.98 9.23 39.47 1.90
1962 2045 9.083422 ACTAGAAGAGATACTAGCATGCAATAA 57.917 33.333 21.98 2.60 39.47 1.40
1965 2048 8.814931 AGAAGAGATACTAGCATGCAATAATCT 58.185 33.333 21.98 20.35 0.00 2.40
1968 2051 8.196771 AGAGATACTAGCATGCAATAATCTAGC 58.803 37.037 21.98 10.95 32.23 3.42
1969 2052 7.845037 AGATACTAGCATGCAATAATCTAGCA 58.155 34.615 21.98 1.80 43.14 3.49
1970 2053 8.316946 AGATACTAGCATGCAATAATCTAGCAA 58.683 33.333 21.98 3.56 42.15 3.91
1971 2054 8.853077 ATACTAGCATGCAATAATCTAGCAAA 57.147 30.769 21.98 1.19 42.15 3.68
1972 2055 6.963796 ACTAGCATGCAATAATCTAGCAAAC 58.036 36.000 21.98 0.00 42.15 2.93
1973 2056 6.769822 ACTAGCATGCAATAATCTAGCAAACT 59.230 34.615 21.98 0.00 42.15 2.66
1974 2057 7.933577 ACTAGCATGCAATAATCTAGCAAACTA 59.066 33.333 21.98 0.00 42.15 2.24
1975 2058 7.199541 AGCATGCAATAATCTAGCAAACTAG 57.800 36.000 21.98 0.00 46.30 2.57
1988 2071 4.708177 AGCAAACTAGAAGAACAGCAAGA 58.292 39.130 0.00 0.00 0.00 3.02
1989 2072 4.513318 AGCAAACTAGAAGAACAGCAAGAC 59.487 41.667 0.00 0.00 0.00 3.01
1990 2073 4.273480 GCAAACTAGAAGAACAGCAAGACA 59.727 41.667 0.00 0.00 0.00 3.41
1991 2074 5.049129 GCAAACTAGAAGAACAGCAAGACAT 60.049 40.000 0.00 0.00 0.00 3.06
1992 2075 6.369005 CAAACTAGAAGAACAGCAAGACATG 58.631 40.000 0.00 0.00 0.00 3.21
2010 2093 2.420628 TGCATAACAGCAGCAAACAC 57.579 45.000 0.00 0.00 40.11 3.32
2011 2094 1.330306 GCATAACAGCAGCAAACACG 58.670 50.000 0.00 0.00 0.00 4.49
2012 2095 1.334960 GCATAACAGCAGCAAACACGT 60.335 47.619 0.00 0.00 0.00 4.49
2013 2096 2.095969 GCATAACAGCAGCAAACACGTA 60.096 45.455 0.00 0.00 0.00 3.57
2014 2097 3.608241 GCATAACAGCAGCAAACACGTAA 60.608 43.478 0.00 0.00 0.00 3.18
2015 2098 2.468532 AACAGCAGCAAACACGTAAC 57.531 45.000 0.00 0.00 0.00 2.50
2016 2099 1.374560 ACAGCAGCAAACACGTAACA 58.625 45.000 0.00 0.00 0.00 2.41
2017 2100 1.740585 ACAGCAGCAAACACGTAACAA 59.259 42.857 0.00 0.00 0.00 2.83
2018 2101 2.357637 ACAGCAGCAAACACGTAACAAT 59.642 40.909 0.00 0.00 0.00 2.71
2019 2102 3.562141 ACAGCAGCAAACACGTAACAATA 59.438 39.130 0.00 0.00 0.00 1.90
2020 2103 4.151070 CAGCAGCAAACACGTAACAATAG 58.849 43.478 0.00 0.00 0.00 1.73
2021 2104 2.908626 GCAGCAAACACGTAACAATAGC 59.091 45.455 0.00 0.00 0.00 2.97
2022 2105 3.364964 GCAGCAAACACGTAACAATAGCT 60.365 43.478 0.00 0.00 0.00 3.32
2023 2106 4.151070 CAGCAAACACGTAACAATAGCTG 58.849 43.478 0.00 0.00 40.57 4.24
2024 2107 3.813166 AGCAAACACGTAACAATAGCTGT 59.187 39.130 0.00 0.00 41.27 4.40
2025 2108 4.992319 AGCAAACACGTAACAATAGCTGTA 59.008 37.500 0.00 0.00 37.23 2.74
2026 2109 5.120208 AGCAAACACGTAACAATAGCTGTAG 59.880 40.000 0.00 0.00 37.23 2.74
2027 2110 5.119588 GCAAACACGTAACAATAGCTGTAGA 59.880 40.000 0.00 0.00 37.23 2.59
2028 2111 6.347079 GCAAACACGTAACAATAGCTGTAGAA 60.347 38.462 0.00 0.00 37.23 2.10
2029 2112 7.569297 CAAACACGTAACAATAGCTGTAGAAA 58.431 34.615 0.00 0.00 37.23 2.52
2030 2113 6.701432 ACACGTAACAATAGCTGTAGAAAC 57.299 37.500 0.00 0.00 37.23 2.78
2031 2114 6.218019 ACACGTAACAATAGCTGTAGAAACA 58.782 36.000 0.00 0.00 37.23 2.83
2045 2128 5.541845 TGTAGAAACAGACATGAACAGAGG 58.458 41.667 0.00 0.00 0.00 3.69
2046 2129 4.963318 AGAAACAGACATGAACAGAGGA 57.037 40.909 0.00 0.00 0.00 3.71
2047 2130 5.495926 AGAAACAGACATGAACAGAGGAT 57.504 39.130 0.00 0.00 0.00 3.24
2048 2131 5.243981 AGAAACAGACATGAACAGAGGATG 58.756 41.667 0.00 0.00 0.00 3.51
2049 2132 4.630644 AACAGACATGAACAGAGGATGT 57.369 40.909 0.00 0.00 46.97 3.06
2059 2142 2.526432 ACAGAGGATGTTGGACGTACT 58.474 47.619 0.00 0.00 39.96 2.73
2060 2143 2.231478 ACAGAGGATGTTGGACGTACTG 59.769 50.000 0.00 0.00 39.96 2.74
2061 2144 2.492088 CAGAGGATGTTGGACGTACTGA 59.508 50.000 0.00 0.00 25.66 3.41
2062 2145 3.131223 CAGAGGATGTTGGACGTACTGAT 59.869 47.826 0.00 0.00 25.66 2.90
2063 2146 3.381908 AGAGGATGTTGGACGTACTGATC 59.618 47.826 0.00 0.00 25.66 2.92
2064 2147 2.099263 AGGATGTTGGACGTACTGATCG 59.901 50.000 0.00 0.00 24.12 3.69
2065 2148 2.159282 GGATGTTGGACGTACTGATCGT 60.159 50.000 0.00 0.00 44.27 3.73
2066 2149 3.508762 GATGTTGGACGTACTGATCGTT 58.491 45.455 0.00 0.00 41.64 3.85
2067 2150 4.439153 GGATGTTGGACGTACTGATCGTTA 60.439 45.833 0.00 0.00 41.64 3.18
2068 2151 4.087510 TGTTGGACGTACTGATCGTTAG 57.912 45.455 0.00 0.00 41.64 2.34
2069 2152 2.838386 TGGACGTACTGATCGTTAGC 57.162 50.000 0.00 0.00 41.64 3.09
2070 2153 2.362736 TGGACGTACTGATCGTTAGCT 58.637 47.619 0.00 0.00 41.64 3.32
2071 2154 3.534554 TGGACGTACTGATCGTTAGCTA 58.465 45.455 0.00 0.00 41.64 3.32
2072 2155 4.132336 TGGACGTACTGATCGTTAGCTAT 58.868 43.478 0.00 0.00 41.64 2.97
2073 2156 4.577693 TGGACGTACTGATCGTTAGCTATT 59.422 41.667 0.00 0.00 41.64 1.73
2074 2157 5.759763 TGGACGTACTGATCGTTAGCTATTA 59.240 40.000 0.00 0.00 41.64 0.98
2075 2158 6.429078 TGGACGTACTGATCGTTAGCTATTAT 59.571 38.462 0.00 0.00 41.64 1.28
2076 2159 6.741811 GGACGTACTGATCGTTAGCTATTATG 59.258 42.308 0.00 0.00 41.64 1.90
2077 2160 6.609533 ACGTACTGATCGTTAGCTATTATGG 58.390 40.000 0.00 0.00 38.38 2.74
2078 2161 6.028368 CGTACTGATCGTTAGCTATTATGGG 58.972 44.000 0.00 0.00 0.00 4.00
2079 2162 6.349115 CGTACTGATCGTTAGCTATTATGGGT 60.349 42.308 0.00 0.00 0.00 4.51
2080 2163 5.784177 ACTGATCGTTAGCTATTATGGGTG 58.216 41.667 0.00 0.00 0.00 4.61
2081 2164 4.566004 TGATCGTTAGCTATTATGGGTGC 58.434 43.478 0.00 0.00 0.00 5.01
2082 2165 3.021269 TCGTTAGCTATTATGGGTGCG 57.979 47.619 0.00 0.00 0.00 5.34
2083 2166 2.624364 TCGTTAGCTATTATGGGTGCGA 59.376 45.455 0.00 5.56 0.00 5.10
2084 2167 2.729882 CGTTAGCTATTATGGGTGCGAC 59.270 50.000 0.00 0.00 0.00 5.19
2085 2168 3.724374 GTTAGCTATTATGGGTGCGACA 58.276 45.455 0.00 0.00 0.00 4.35
2086 2169 2.533266 AGCTATTATGGGTGCGACAG 57.467 50.000 0.00 0.00 0.00 3.51
2087 2170 1.762957 AGCTATTATGGGTGCGACAGT 59.237 47.619 0.00 0.00 0.00 3.55
2088 2171 1.867233 GCTATTATGGGTGCGACAGTG 59.133 52.381 0.00 0.00 0.00 3.66
2089 2172 2.741878 GCTATTATGGGTGCGACAGTGT 60.742 50.000 0.00 0.00 0.00 3.55
2090 2173 2.489938 ATTATGGGTGCGACAGTGTT 57.510 45.000 0.00 0.00 0.00 3.32
2091 2174 1.518325 TTATGGGTGCGACAGTGTTG 58.482 50.000 6.11 6.11 0.00 3.33
2092 2175 0.682292 TATGGGTGCGACAGTGTTGA 59.318 50.000 15.07 0.00 0.00 3.18
2093 2176 0.036732 ATGGGTGCGACAGTGTTGAT 59.963 50.000 15.07 0.00 0.00 2.57
2094 2177 0.884259 TGGGTGCGACAGTGTTGATG 60.884 55.000 15.07 0.00 0.00 3.07
2095 2178 0.602638 GGGTGCGACAGTGTTGATGA 60.603 55.000 15.07 0.00 0.00 2.92
2096 2179 0.512952 GGTGCGACAGTGTTGATGAC 59.487 55.000 15.07 6.91 0.00 3.06
2097 2180 0.161658 GTGCGACAGTGTTGATGACG 59.838 55.000 15.07 5.06 38.54 4.35
2098 2181 0.031449 TGCGACAGTGTTGATGACGA 59.969 50.000 15.07 0.00 37.91 4.20
2099 2182 1.336795 TGCGACAGTGTTGATGACGAT 60.337 47.619 15.07 0.00 37.91 3.73
2100 2183 1.059692 GCGACAGTGTTGATGACGATG 59.940 52.381 15.07 0.00 37.91 3.84
2101 2184 2.328473 CGACAGTGTTGATGACGATGT 58.672 47.619 4.29 0.00 37.91 3.06
2102 2185 2.731451 CGACAGTGTTGATGACGATGTT 59.269 45.455 4.29 0.00 37.91 2.71
2103 2186 3.422214 CGACAGTGTTGATGACGATGTTG 60.422 47.826 4.29 0.00 37.91 3.33
2104 2187 2.807967 ACAGTGTTGATGACGATGTTGG 59.192 45.455 0.00 0.00 0.00 3.77
2105 2188 1.806542 AGTGTTGATGACGATGTTGGC 59.193 47.619 0.00 0.00 0.00 4.52
2106 2189 0.795698 TGTTGATGACGATGTTGGCG 59.204 50.000 0.00 0.00 0.00 5.69
2107 2190 1.075542 GTTGATGACGATGTTGGCGA 58.924 50.000 0.00 0.00 0.00 5.54
2108 2191 1.075542 TTGATGACGATGTTGGCGAC 58.924 50.000 0.00 0.00 0.00 5.19
2109 2192 1.075979 TGATGACGATGTTGGCGACG 61.076 55.000 0.00 0.00 0.00 5.12
2110 2193 0.800683 GATGACGATGTTGGCGACGA 60.801 55.000 0.00 0.00 0.00 4.20
2111 2194 0.179111 ATGACGATGTTGGCGACGAT 60.179 50.000 0.00 0.00 0.00 3.73
2112 2195 0.800683 TGACGATGTTGGCGACGATC 60.801 55.000 0.00 4.18 0.00 3.69
2113 2196 0.525668 GACGATGTTGGCGACGATCT 60.526 55.000 0.00 0.00 0.00 2.75
2114 2197 0.802222 ACGATGTTGGCGACGATCTG 60.802 55.000 0.00 4.67 0.00 2.90
2115 2198 1.638467 GATGTTGGCGACGATCTGC 59.362 57.895 0.00 0.00 0.00 4.26
2116 2199 0.807667 GATGTTGGCGACGATCTGCT 60.808 55.000 0.00 0.00 0.00 4.24
2117 2200 1.086067 ATGTTGGCGACGATCTGCTG 61.086 55.000 0.00 0.00 0.00 4.41
2118 2201 2.815211 TTGGCGACGATCTGCTGC 60.815 61.111 0.00 0.00 0.00 5.25
2119 2202 3.300934 TTGGCGACGATCTGCTGCT 62.301 57.895 0.00 0.00 0.00 4.24
2120 2203 3.260483 GGCGACGATCTGCTGCTG 61.260 66.667 0.00 0.00 0.00 4.41
2121 2204 2.202663 GCGACGATCTGCTGCTGA 60.203 61.111 11.69 11.69 0.00 4.26
2122 2205 2.512301 GCGACGATCTGCTGCTGAC 61.512 63.158 11.54 5.43 0.00 3.51
2123 2206 2.220224 CGACGATCTGCTGCTGACG 61.220 63.158 20.52 20.52 0.00 4.35
2124 2207 1.875813 GACGATCTGCTGCTGACGG 60.876 63.158 23.44 16.31 0.00 4.79
2131 2214 2.815211 GCTGCTGACGGCGATGAA 60.815 61.111 16.62 0.00 45.43 2.57
2132 2215 2.176273 GCTGCTGACGGCGATGAAT 61.176 57.895 16.62 0.00 45.43 2.57
2133 2216 0.875908 GCTGCTGACGGCGATGAATA 60.876 55.000 16.62 0.00 45.43 1.75
2134 2217 0.855349 CTGCTGACGGCGATGAATAC 59.145 55.000 16.62 0.00 45.43 1.89
2135 2218 0.869880 TGCTGACGGCGATGAATACG 60.870 55.000 16.62 0.00 45.43 3.06
2136 2219 0.594028 GCTGACGGCGATGAATACGA 60.594 55.000 16.62 0.00 0.00 3.43
2137 2220 1.121240 CTGACGGCGATGAATACGAC 58.879 55.000 16.62 0.00 35.25 4.34
2142 2225 2.046283 GGCGATGAATACGACGATGA 57.954 50.000 0.00 0.00 0.00 2.92
2143 2226 1.979469 GGCGATGAATACGACGATGAG 59.021 52.381 0.00 0.00 0.00 2.90
2144 2227 2.604855 GGCGATGAATACGACGATGAGT 60.605 50.000 0.00 0.00 0.00 3.41
2145 2228 3.364664 GGCGATGAATACGACGATGAGTA 60.365 47.826 0.00 0.00 0.00 2.59
2146 2229 3.841317 GCGATGAATACGACGATGAGTAG 59.159 47.826 0.00 0.00 0.00 2.57
2147 2230 3.841317 CGATGAATACGACGATGAGTAGC 59.159 47.826 0.00 0.00 0.00 3.58
2148 2231 4.610680 CGATGAATACGACGATGAGTAGCA 60.611 45.833 0.00 0.00 0.00 3.49
2149 2232 3.948851 TGAATACGACGATGAGTAGCAC 58.051 45.455 0.00 0.00 0.00 4.40
2150 2233 3.242969 TGAATACGACGATGAGTAGCACC 60.243 47.826 0.00 0.00 0.00 5.01
2151 2234 0.654160 TACGACGATGAGTAGCACCG 59.346 55.000 0.00 0.00 0.00 4.94
2152 2235 1.939785 CGACGATGAGTAGCACCGC 60.940 63.158 0.00 0.00 0.00 5.68
2153 2236 1.589196 GACGATGAGTAGCACCGCC 60.589 63.158 0.00 0.00 0.00 6.13
2154 2237 2.279517 CGATGAGTAGCACCGCCC 60.280 66.667 0.00 0.00 0.00 6.13
2155 2238 2.279517 GATGAGTAGCACCGCCCG 60.280 66.667 0.00 0.00 0.00 6.13
2156 2239 2.758327 ATGAGTAGCACCGCCCGA 60.758 61.111 0.00 0.00 0.00 5.14
2157 2240 2.955751 GATGAGTAGCACCGCCCGAC 62.956 65.000 0.00 0.00 0.00 4.79
2158 2241 3.450115 GAGTAGCACCGCCCGACT 61.450 66.667 0.00 0.00 0.00 4.18
2159 2242 2.995574 AGTAGCACCGCCCGACTT 60.996 61.111 0.00 0.00 0.00 3.01
2160 2243 2.813908 GTAGCACCGCCCGACTTG 60.814 66.667 0.00 0.00 0.00 3.16
2161 2244 4.077184 TAGCACCGCCCGACTTGG 62.077 66.667 0.00 0.00 37.55 3.61
2181 2264 4.496670 GGAAGACGACCCGTGATG 57.503 61.111 0.00 0.00 41.37 3.07
2182 2265 1.888018 GGAAGACGACCCGTGATGA 59.112 57.895 0.00 0.00 41.37 2.92
2183 2266 0.458025 GGAAGACGACCCGTGATGAC 60.458 60.000 0.00 0.00 41.37 3.06
2184 2267 0.797249 GAAGACGACCCGTGATGACG 60.797 60.000 0.00 0.00 41.37 4.35
2197 2280 3.996032 GTGATGACGAATTTGAGCAGTC 58.004 45.455 0.00 0.00 0.00 3.51
2198 2281 2.667969 TGATGACGAATTTGAGCAGTCG 59.332 45.455 0.00 0.00 39.37 4.18
2199 2282 0.790207 TGACGAATTTGAGCAGTCGC 59.210 50.000 0.00 0.00 36.99 5.19
2200 2283 0.246912 GACGAATTTGAGCAGTCGCG 60.247 55.000 0.00 0.00 45.49 5.87
2201 2284 1.578618 CGAATTTGAGCAGTCGCGC 60.579 57.895 0.00 0.00 45.49 6.86
2202 2285 1.497278 GAATTTGAGCAGTCGCGCA 59.503 52.632 8.75 0.00 46.96 6.09
2217 2300 2.727544 GCACAGCGCTTCCCAAAA 59.272 55.556 7.50 0.00 37.77 2.44
2218 2301 1.067250 GCACAGCGCTTCCCAAAAA 59.933 52.632 7.50 0.00 37.77 1.94
2219 2302 1.215014 GCACAGCGCTTCCCAAAAAC 61.215 55.000 7.50 0.00 37.77 2.43
2220 2303 0.597377 CACAGCGCTTCCCAAAAACC 60.597 55.000 7.50 0.00 0.00 3.27
2221 2304 0.755327 ACAGCGCTTCCCAAAAACCT 60.755 50.000 7.50 0.00 0.00 3.50
2222 2305 1.243902 CAGCGCTTCCCAAAAACCTA 58.756 50.000 7.50 0.00 0.00 3.08
2223 2306 1.611491 CAGCGCTTCCCAAAAACCTAA 59.389 47.619 7.50 0.00 0.00 2.69
2224 2307 2.231235 CAGCGCTTCCCAAAAACCTAAT 59.769 45.455 7.50 0.00 0.00 1.73
2225 2308 2.897326 AGCGCTTCCCAAAAACCTAATT 59.103 40.909 2.64 0.00 0.00 1.40
2226 2309 3.056821 AGCGCTTCCCAAAAACCTAATTC 60.057 43.478 2.64 0.00 0.00 2.17
2227 2310 3.498082 CGCTTCCCAAAAACCTAATTCG 58.502 45.455 0.00 0.00 0.00 3.34
2228 2311 3.057806 CGCTTCCCAAAAACCTAATTCGT 60.058 43.478 0.00 0.00 0.00 3.85
2229 2312 4.482386 GCTTCCCAAAAACCTAATTCGTC 58.518 43.478 0.00 0.00 0.00 4.20
2230 2313 4.617530 GCTTCCCAAAAACCTAATTCGTCC 60.618 45.833 0.00 0.00 0.00 4.79
2231 2314 4.376225 TCCCAAAAACCTAATTCGTCCT 57.624 40.909 0.00 0.00 0.00 3.85
2232 2315 4.329392 TCCCAAAAACCTAATTCGTCCTC 58.671 43.478 0.00 0.00 0.00 3.71
2233 2316 4.042435 TCCCAAAAACCTAATTCGTCCTCT 59.958 41.667 0.00 0.00 0.00 3.69
2234 2317 4.395231 CCCAAAAACCTAATTCGTCCTCTC 59.605 45.833 0.00 0.00 0.00 3.20
2235 2318 4.395231 CCAAAAACCTAATTCGTCCTCTCC 59.605 45.833 0.00 0.00 0.00 3.71
2236 2319 3.908643 AAACCTAATTCGTCCTCTCCC 57.091 47.619 0.00 0.00 0.00 4.30
2237 2320 1.400737 ACCTAATTCGTCCTCTCCCG 58.599 55.000 0.00 0.00 0.00 5.14
2238 2321 0.674534 CCTAATTCGTCCTCTCCCGG 59.325 60.000 0.00 0.00 0.00 5.73
2239 2322 1.400737 CTAATTCGTCCTCTCCCGGT 58.599 55.000 0.00 0.00 0.00 5.28
2240 2323 1.067212 CTAATTCGTCCTCTCCCGGTG 59.933 57.143 0.00 0.00 0.00 4.94
2241 2324 2.240162 AATTCGTCCTCTCCCGGTGC 62.240 60.000 0.00 0.00 0.00 5.01
2242 2325 4.671590 TCGTCCTCTCCCGGTGCA 62.672 66.667 0.00 0.00 0.00 4.57
2243 2326 4.135153 CGTCCTCTCCCGGTGCAG 62.135 72.222 0.00 0.00 0.00 4.41
2244 2327 3.775654 GTCCTCTCCCGGTGCAGG 61.776 72.222 0.00 1.62 0.00 4.85
2245 2328 3.992641 TCCTCTCCCGGTGCAGGA 61.993 66.667 8.16 8.16 32.30 3.86
2246 2329 2.765807 CCTCTCCCGGTGCAGGAT 60.766 66.667 0.00 0.00 31.48 3.24
2247 2330 2.801631 CCTCTCCCGGTGCAGGATC 61.802 68.421 0.00 0.00 31.48 3.36
2248 2331 3.144120 CTCTCCCGGTGCAGGATCG 62.144 68.421 0.00 0.00 31.48 3.69
2249 2332 4.899239 CTCCCGGTGCAGGATCGC 62.899 72.222 0.00 0.00 31.48 4.58
2251 2334 4.776322 CCCGGTGCAGGATCGCAA 62.776 66.667 0.00 0.00 45.14 4.85
2252 2335 2.745884 CCGGTGCAGGATCGCAAA 60.746 61.111 0.00 0.00 45.14 3.68
2253 2336 2.753966 CCGGTGCAGGATCGCAAAG 61.754 63.158 0.00 0.00 45.14 2.77
2254 2337 1.741401 CGGTGCAGGATCGCAAAGA 60.741 57.895 0.00 0.00 45.14 2.52
2255 2338 1.796796 GGTGCAGGATCGCAAAGAC 59.203 57.895 0.00 0.00 45.14 3.01
2256 2339 1.421485 GTGCAGGATCGCAAAGACG 59.579 57.895 0.00 0.00 45.14 4.18
2257 2340 1.014044 GTGCAGGATCGCAAAGACGA 61.014 55.000 0.00 0.00 45.14 4.20
2258 2341 0.320334 TGCAGGATCGCAAAGACGAA 60.320 50.000 0.00 0.00 46.59 3.85
2259 2342 0.095417 GCAGGATCGCAAAGACGAAC 59.905 55.000 0.00 0.00 46.59 3.95
2260 2343 0.366871 CAGGATCGCAAAGACGAACG 59.633 55.000 0.00 0.00 46.59 3.95
2261 2344 0.736325 AGGATCGCAAAGACGAACGG 60.736 55.000 0.00 0.00 46.59 4.44
2262 2345 1.012486 GGATCGCAAAGACGAACGGT 61.012 55.000 0.00 0.00 46.59 4.83
2263 2346 0.788391 GATCGCAAAGACGAACGGTT 59.212 50.000 0.00 0.00 46.59 4.44
2264 2347 0.788391 ATCGCAAAGACGAACGGTTC 59.212 50.000 10.83 10.83 46.59 3.62
2265 2348 1.203313 CGCAAAGACGAACGGTTCC 59.797 57.895 14.83 2.41 34.06 3.62
2266 2349 1.203313 GCAAAGACGAACGGTTCCG 59.797 57.895 14.83 9.81 0.00 4.30
2267 2350 1.857364 CAAAGACGAACGGTTCCGG 59.143 57.895 14.83 0.00 0.00 5.14
2268 2351 0.598158 CAAAGACGAACGGTTCCGGA 60.598 55.000 14.83 0.00 0.00 5.14
2269 2352 0.319297 AAAGACGAACGGTTCCGGAG 60.319 55.000 14.83 8.42 0.00 4.63
2270 2353 1.174712 AAGACGAACGGTTCCGGAGA 61.175 55.000 14.83 0.00 0.00 3.71
2271 2354 1.443363 GACGAACGGTTCCGGAGAC 60.443 63.158 14.83 6.24 0.00 3.36
2272 2355 2.126189 CGAACGGTTCCGGAGACC 60.126 66.667 19.92 19.92 0.00 3.85
2273 2356 2.633509 CGAACGGTTCCGGAGACCT 61.634 63.158 24.28 12.96 34.95 3.85
2274 2357 1.080025 GAACGGTTCCGGAGACCTG 60.080 63.158 24.28 20.51 34.95 4.00
2275 2358 3.236003 AACGGTTCCGGAGACCTGC 62.236 63.158 24.28 6.87 34.95 4.85
2276 2359 3.382832 CGGTTCCGGAGACCTGCT 61.383 66.667 24.28 0.00 34.95 4.24
2277 2360 2.579738 GGTTCCGGAGACCTGCTC 59.420 66.667 21.61 0.00 43.17 4.26
2278 2361 1.985116 GGTTCCGGAGACCTGCTCT 60.985 63.158 21.61 0.00 43.43 4.09
2279 2362 1.513622 GTTCCGGAGACCTGCTCTC 59.486 63.158 3.34 0.00 44.52 3.20
2284 2367 2.888863 GAGACCTGCTCTCCCACG 59.111 66.667 0.00 0.00 39.87 4.94
2285 2368 3.363844 GAGACCTGCTCTCCCACGC 62.364 68.421 0.00 0.00 39.87 5.34
2286 2369 4.803426 GACCTGCTCTCCCACGCG 62.803 72.222 3.53 3.53 0.00 6.01
2314 2397 2.824041 CCGGCGTTTGGGATGGAG 60.824 66.667 6.01 0.00 0.00 3.86
2315 2398 2.046314 CGGCGTTTGGGATGGAGT 60.046 61.111 0.00 0.00 0.00 3.85
2316 2399 1.219664 CGGCGTTTGGGATGGAGTA 59.780 57.895 0.00 0.00 0.00 2.59
2317 2400 0.810031 CGGCGTTTGGGATGGAGTAG 60.810 60.000 0.00 0.00 0.00 2.57
2318 2401 0.539986 GGCGTTTGGGATGGAGTAGA 59.460 55.000 0.00 0.00 0.00 2.59
2319 2402 1.653151 GCGTTTGGGATGGAGTAGAC 58.347 55.000 0.00 0.00 0.00 2.59
2320 2403 1.207329 GCGTTTGGGATGGAGTAGACT 59.793 52.381 0.00 0.00 0.00 3.24
2321 2404 2.429610 GCGTTTGGGATGGAGTAGACTA 59.570 50.000 0.00 0.00 0.00 2.59
2322 2405 3.737355 GCGTTTGGGATGGAGTAGACTAC 60.737 52.174 4.32 4.32 0.00 2.73
2323 2406 3.488721 CGTTTGGGATGGAGTAGACTACG 60.489 52.174 6.98 0.00 0.00 3.51
2324 2407 3.657398 TTGGGATGGAGTAGACTACGA 57.343 47.619 6.98 0.00 0.00 3.43
2325 2408 3.878237 TGGGATGGAGTAGACTACGAT 57.122 47.619 6.98 1.38 0.00 3.73
2326 2409 3.487372 TGGGATGGAGTAGACTACGATG 58.513 50.000 6.98 0.00 0.00 3.84
2327 2410 2.820787 GGGATGGAGTAGACTACGATGG 59.179 54.545 6.98 0.00 0.00 3.51
2328 2411 2.229302 GGATGGAGTAGACTACGATGGC 59.771 54.545 6.98 0.00 0.00 4.40
2329 2412 1.306148 TGGAGTAGACTACGATGGCG 58.694 55.000 6.98 0.00 44.79 5.69
2330 2413 0.592148 GGAGTAGACTACGATGGCGG 59.408 60.000 6.98 0.00 43.17 6.13
2331 2414 0.040246 GAGTAGACTACGATGGCGGC 60.040 60.000 0.00 0.00 43.17 6.53
2332 2415 1.370172 GTAGACTACGATGGCGGCG 60.370 63.158 0.51 0.51 43.17 6.46
2333 2416 3.190323 TAGACTACGATGGCGGCGC 62.190 63.158 26.17 26.17 43.17 6.53
2334 2417 4.865761 GACTACGATGGCGGCGCA 62.866 66.667 34.36 19.88 43.17 6.09
2335 2418 4.444838 ACTACGATGGCGGCGCAA 62.445 61.111 34.36 25.39 43.17 4.85
2336 2419 3.630148 CTACGATGGCGGCGCAAG 61.630 66.667 34.36 21.93 43.17 4.01
2337 2420 4.444838 TACGATGGCGGCGCAAGT 62.445 61.111 34.36 26.04 43.17 3.16
2338 2421 3.943479 TACGATGGCGGCGCAAGTT 62.943 57.895 34.36 14.55 43.17 2.66
2339 2422 4.817063 CGATGGCGGCGCAAGTTG 62.817 66.667 34.36 17.67 41.68 3.16
2340 2423 3.737172 GATGGCGGCGCAAGTTGT 61.737 61.111 34.36 7.09 41.68 3.32
2341 2424 3.951655 GATGGCGGCGCAAGTTGTG 62.952 63.158 34.36 12.17 41.68 3.33
2343 2426 4.389576 GGCGGCGCAAGTTGTGAG 62.390 66.667 34.36 13.23 41.68 3.51
2344 2427 3.345808 GCGGCGCAAGTTGTGAGA 61.346 61.111 29.21 0.00 41.68 3.27
2345 2428 2.680913 GCGGCGCAAGTTGTGAGAT 61.681 57.895 29.21 0.00 41.68 2.75
2346 2429 1.133253 CGGCGCAAGTTGTGAGATG 59.867 57.895 20.42 2.32 41.68 2.90
2347 2430 1.291184 CGGCGCAAGTTGTGAGATGA 61.291 55.000 20.42 0.00 41.68 2.92
2348 2431 0.445436 GGCGCAAGTTGTGAGATGAG 59.555 55.000 20.42 0.00 41.68 2.90
2349 2432 0.445436 GCGCAAGTTGTGAGATGAGG 59.555 55.000 20.42 0.00 41.68 3.86
2350 2433 0.445436 CGCAAGTTGTGAGATGAGGC 59.555 55.000 11.05 0.00 0.00 4.70
2351 2434 1.527034 GCAAGTTGTGAGATGAGGCA 58.473 50.000 4.48 0.00 0.00 4.75
2352 2435 1.881973 GCAAGTTGTGAGATGAGGCAA 59.118 47.619 4.48 0.00 0.00 4.52
2353 2436 2.294233 GCAAGTTGTGAGATGAGGCAAA 59.706 45.455 4.48 0.00 0.00 3.68
2354 2437 3.243501 GCAAGTTGTGAGATGAGGCAAAA 60.244 43.478 4.48 0.00 0.00 2.44
2355 2438 4.293415 CAAGTTGTGAGATGAGGCAAAAC 58.707 43.478 0.00 0.00 33.43 2.43
2356 2439 2.887152 AGTTGTGAGATGAGGCAAAACC 59.113 45.455 0.00 0.00 33.67 3.27
2357 2440 1.909700 TGTGAGATGAGGCAAAACCC 58.090 50.000 0.00 0.00 40.58 4.11
2358 2441 1.425066 TGTGAGATGAGGCAAAACCCT 59.575 47.619 0.00 0.00 40.58 4.34
2359 2442 2.642311 TGTGAGATGAGGCAAAACCCTA 59.358 45.455 0.00 0.00 40.58 3.53
2360 2443 3.274288 GTGAGATGAGGCAAAACCCTAG 58.726 50.000 0.00 0.00 40.58 3.02
2361 2444 2.239654 TGAGATGAGGCAAAACCCTAGG 59.760 50.000 0.06 0.06 40.58 3.02
2362 2445 2.239907 GAGATGAGGCAAAACCCTAGGT 59.760 50.000 8.29 0.00 40.58 3.08
2363 2446 2.025887 AGATGAGGCAAAACCCTAGGTG 60.026 50.000 8.29 0.00 40.58 4.00
2364 2447 1.145571 TGAGGCAAAACCCTAGGTGT 58.854 50.000 8.29 2.33 40.58 4.16
2365 2448 1.497286 TGAGGCAAAACCCTAGGTGTT 59.503 47.619 8.29 8.82 40.58 3.32
2366 2449 2.091555 TGAGGCAAAACCCTAGGTGTTT 60.092 45.455 17.71 17.71 40.58 2.83
2367 2450 2.963101 GAGGCAAAACCCTAGGTGTTTT 59.037 45.455 24.20 24.20 44.43 2.43
2368 2451 3.380393 AGGCAAAACCCTAGGTGTTTTT 58.620 40.909 25.98 17.41 42.38 1.94
2369 2452 3.386726 AGGCAAAACCCTAGGTGTTTTTC 59.613 43.478 25.98 22.86 42.38 2.29
2370 2453 3.377439 GCAAAACCCTAGGTGTTTTTCG 58.623 45.455 25.98 20.06 42.38 3.46
2371 2454 3.797524 GCAAAACCCTAGGTGTTTTTCGG 60.798 47.826 25.98 19.60 42.38 4.30
2372 2455 3.301794 AAACCCTAGGTGTTTTTCGGT 57.698 42.857 17.71 0.16 35.34 4.69
2373 2456 2.265589 ACCCTAGGTGTTTTTCGGTG 57.734 50.000 8.29 0.00 32.98 4.94
2374 2457 1.491754 ACCCTAGGTGTTTTTCGGTGT 59.508 47.619 8.29 0.00 32.98 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.297776 CAGGGCTTCACAATGATAAACCTAG 59.702 44.000 0.00 0.00 0.00 3.02
1 2 5.192927 CAGGGCTTCACAATGATAAACCTA 58.807 41.667 0.00 0.00 0.00 3.08
2 3 4.019174 CAGGGCTTCACAATGATAAACCT 58.981 43.478 0.00 0.00 0.00 3.50
3 4 3.763897 ACAGGGCTTCACAATGATAAACC 59.236 43.478 0.00 0.00 0.00 3.27
4 5 4.380867 CCACAGGGCTTCACAATGATAAAC 60.381 45.833 0.00 0.00 0.00 2.01
5 6 3.763360 CCACAGGGCTTCACAATGATAAA 59.237 43.478 0.00 0.00 0.00 1.40
6 7 3.010027 TCCACAGGGCTTCACAATGATAA 59.990 43.478 0.00 0.00 0.00 1.75
7 8 2.575735 TCCACAGGGCTTCACAATGATA 59.424 45.455 0.00 0.00 0.00 2.15
8 9 1.355381 TCCACAGGGCTTCACAATGAT 59.645 47.619 0.00 0.00 0.00 2.45
9 10 0.770499 TCCACAGGGCTTCACAATGA 59.230 50.000 0.00 0.00 0.00 2.57
10 11 1.171308 CTCCACAGGGCTTCACAATG 58.829 55.000 0.00 0.00 0.00 2.82
11 12 0.773644 ACTCCACAGGGCTTCACAAT 59.226 50.000 0.00 0.00 0.00 2.71
12 13 0.550914 AACTCCACAGGGCTTCACAA 59.449 50.000 0.00 0.00 0.00 3.33
13 14 1.429930 TAACTCCACAGGGCTTCACA 58.570 50.000 0.00 0.00 0.00 3.58
14 15 2.152016 GTTAACTCCACAGGGCTTCAC 58.848 52.381 0.00 0.00 0.00 3.18
15 16 1.073284 GGTTAACTCCACAGGGCTTCA 59.927 52.381 5.42 0.00 0.00 3.02
16 17 1.822506 GGTTAACTCCACAGGGCTTC 58.177 55.000 5.42 0.00 0.00 3.86
17 18 0.036306 CGGTTAACTCCACAGGGCTT 59.964 55.000 5.42 0.00 0.00 4.35
18 19 1.677552 CGGTTAACTCCACAGGGCT 59.322 57.895 5.42 0.00 0.00 5.19
19 20 1.376812 CCGGTTAACTCCACAGGGC 60.377 63.158 5.42 0.00 0.00 5.19
20 21 0.036671 GACCGGTTAACTCCACAGGG 60.037 60.000 9.42 0.00 34.05 4.45
24 25 1.071228 AGTTGGACCGGTTAACTCCAC 59.929 52.381 24.34 14.45 33.65 4.02
35 36 1.875514 CATCATATGCCAGTTGGACCG 59.124 52.381 1.45 0.00 37.39 4.79
115 118 9.961265 TGCAGACAATACTACATACAGTAATAC 57.039 33.333 0.00 0.00 34.77 1.89
120 123 9.481340 CAATATGCAGACAATACTACATACAGT 57.519 33.333 0.00 0.00 31.60 3.55
121 124 8.929746 CCAATATGCAGACAATACTACATACAG 58.070 37.037 0.00 0.00 31.60 2.74
122 125 7.387673 GCCAATATGCAGACAATACTACATACA 59.612 37.037 0.00 0.00 31.60 2.29
123 126 7.604164 AGCCAATATGCAGACAATACTACATAC 59.396 37.037 0.00 0.00 31.60 2.39
128 131 6.226052 CAGAGCCAATATGCAGACAATACTA 58.774 40.000 0.00 0.00 0.00 1.82
131 134 3.817084 GCAGAGCCAATATGCAGACAATA 59.183 43.478 0.00 0.00 45.71 1.90
165 168 3.335579 ACTGGAAACCTTGATTCTACGC 58.664 45.455 0.00 0.00 0.00 4.42
166 169 5.006746 GCATACTGGAAACCTTGATTCTACG 59.993 44.000 0.00 0.00 0.00 3.51
167 170 6.116126 AGCATACTGGAAACCTTGATTCTAC 58.884 40.000 0.00 0.00 0.00 2.59
168 171 6.070251 TGAGCATACTGGAAACCTTGATTCTA 60.070 38.462 0.00 0.00 0.00 2.10
169 172 5.184892 AGCATACTGGAAACCTTGATTCT 57.815 39.130 0.00 0.00 0.00 2.40
170 173 4.943705 TGAGCATACTGGAAACCTTGATTC 59.056 41.667 0.00 0.00 0.00 2.52
172 175 4.574674 TGAGCATACTGGAAACCTTGAT 57.425 40.909 0.00 0.00 0.00 2.57
174 177 4.326826 TCTTGAGCATACTGGAAACCTTG 58.673 43.478 0.00 0.00 0.00 3.61
175 178 4.640771 TCTTGAGCATACTGGAAACCTT 57.359 40.909 0.00 0.00 0.00 3.50
195 206 4.593956 ACTCCAGAAATTCCACTCCAATC 58.406 43.478 0.00 0.00 0.00 2.67
215 226 0.687354 AGGATTCCAGACACGCAACT 59.313 50.000 5.29 0.00 0.00 3.16
221 233 4.894784 TGTAGTTCAAGGATTCCAGACAC 58.105 43.478 5.29 4.52 0.00 3.67
259 271 2.749621 GGCCAGACACAGAATTTACCAG 59.250 50.000 0.00 0.00 0.00 4.00
317 329 1.999648 TTTGCATATGGATCCAGGCC 58.000 50.000 24.74 13.15 0.00 5.19
321 333 8.859090 CCTAAGTTTAATTTGCATATGGATCCA 58.141 33.333 18.88 18.88 0.00 3.41
322 334 9.077885 TCCTAAGTTTAATTTGCATATGGATCC 57.922 33.333 4.20 4.20 0.00 3.36
350 362 7.000472 ACCTGAGAATTCCATGTGTATTATGG 59.000 38.462 0.65 0.00 45.17 2.74
364 376 4.868734 CGTACTTGGGTTACCTGAGAATTC 59.131 45.833 0.00 0.00 37.76 2.17
370 382 3.766545 AGTACGTACTTGGGTTACCTGA 58.233 45.455 22.45 0.00 37.76 3.86
443 455 0.392193 CTGCTTCTGATCCGCAACCT 60.392 55.000 0.00 0.00 32.66 3.50
444 456 0.391661 TCTGCTTCTGATCCGCAACC 60.392 55.000 0.00 0.00 32.66 3.77
446 458 0.610174 ACTCTGCTTCTGATCCGCAA 59.390 50.000 0.00 0.00 32.66 4.85
448 460 1.285578 GAACTCTGCTTCTGATCCGC 58.714 55.000 0.00 0.00 0.00 5.54
449 461 2.662006 TGAACTCTGCTTCTGATCCG 57.338 50.000 0.00 0.00 0.00 4.18
450 462 5.851720 TGATATGAACTCTGCTTCTGATCC 58.148 41.667 0.00 0.00 0.00 3.36
452 464 7.255173 GCAAATGATATGAACTCTGCTTCTGAT 60.255 37.037 0.00 0.00 0.00 2.90
453 465 6.037940 GCAAATGATATGAACTCTGCTTCTGA 59.962 38.462 0.00 0.00 0.00 3.27
497 509 1.145377 AACTGAAGACACGGCCGTT 59.855 52.632 32.11 20.44 0.00 4.44
695 725 3.557475 CCCATGTTTTACGGTGTCCACTA 60.557 47.826 0.00 0.00 0.00 2.74
709 739 2.290960 GGTGCTAGGAAGACCCATGTTT 60.291 50.000 0.00 0.00 37.41 2.83
833 863 1.201429 GGTTTGGAGAGGGAGCAGGA 61.201 60.000 0.00 0.00 0.00 3.86
928 979 1.005097 TGTCGGTCTGAAGCTAGGGTA 59.995 52.381 0.00 0.00 0.00 3.69
938 989 1.364901 GGTCGGTTTGTCGGTCTGA 59.635 57.895 0.00 0.00 0.00 3.27
1486 1567 1.019278 ATGCACGGGCGTTCTACAAG 61.019 55.000 4.58 0.00 45.35 3.16
1592 1675 1.324383 TTGGTGCAGTAGTCTCGTGA 58.676 50.000 0.00 0.00 0.00 4.35
1593 1676 1.792949 GTTTGGTGCAGTAGTCTCGTG 59.207 52.381 0.00 0.00 0.00 4.35
1594 1677 1.411246 TGTTTGGTGCAGTAGTCTCGT 59.589 47.619 0.00 0.00 0.00 4.18
1605 1688 2.357637 TGTGAAGCTAAGTGTTTGGTGC 59.642 45.455 0.00 0.00 0.00 5.01
1641 1724 6.201806 GGAAGATGATAAACTCATTGAGGACG 59.798 42.308 17.66 0.00 44.83 4.79
1690 1773 2.029649 TCTTTAAAGTCCACGACTCGGG 60.030 50.000 14.74 0.00 42.59 5.14
1692 1775 4.382160 GTCTTCTTTAAAGTCCACGACTCG 59.618 45.833 14.74 0.00 42.59 4.18
1718 1801 2.470983 TCCATCAATGCTCACGTTCA 57.529 45.000 0.00 0.00 0.00 3.18
1723 1806 2.424956 GTCCCTTTCCATCAATGCTCAC 59.575 50.000 0.00 0.00 0.00 3.51
1788 1871 1.500474 TAGGTGCCATGGGAAGAGAG 58.500 55.000 15.13 0.00 0.00 3.20
1789 1872 1.965414 TTAGGTGCCATGGGAAGAGA 58.035 50.000 15.13 0.00 0.00 3.10
1790 1873 2.954318 CAATTAGGTGCCATGGGAAGAG 59.046 50.000 15.13 0.00 0.00 2.85
1868 1951 9.513906 TTCCAACACTCATCATCACTAAAAATA 57.486 29.630 0.00 0.00 0.00 1.40
1869 1952 8.408043 TTCCAACACTCATCATCACTAAAAAT 57.592 30.769 0.00 0.00 0.00 1.82
1888 1971 7.333528 TCATGAACTTGCCTAATATTCCAAC 57.666 36.000 0.00 0.00 0.00 3.77
1889 1972 8.537728 AATCATGAACTTGCCTAATATTCCAA 57.462 30.769 0.00 0.00 0.00 3.53
1890 1973 9.639563 TTAATCATGAACTTGCCTAATATTCCA 57.360 29.630 0.00 0.00 0.00 3.53
1895 1978 9.639563 TGGAATTAATCATGAACTTGCCTAATA 57.360 29.630 0.00 0.00 0.00 0.98
1896 1979 8.537728 TGGAATTAATCATGAACTTGCCTAAT 57.462 30.769 0.00 0.00 0.00 1.73
1897 1980 7.615365 ACTGGAATTAATCATGAACTTGCCTAA 59.385 33.333 0.00 0.00 0.00 2.69
1898 1981 7.118723 ACTGGAATTAATCATGAACTTGCCTA 58.881 34.615 0.00 0.00 0.00 3.93
1899 1982 5.954150 ACTGGAATTAATCATGAACTTGCCT 59.046 36.000 0.00 0.00 0.00 4.75
1900 1983 6.212888 ACTGGAATTAATCATGAACTTGCC 57.787 37.500 0.00 0.00 0.00 4.52
1901 1984 9.807649 ATTTACTGGAATTAATCATGAACTTGC 57.192 29.630 0.00 0.00 0.00 4.01
1918 2001 9.434275 TCTTCTAGTCATGGATTATTTACTGGA 57.566 33.333 0.00 0.00 0.00 3.86
1919 2002 9.703892 CTCTTCTAGTCATGGATTATTTACTGG 57.296 37.037 0.00 0.00 0.00 4.00
1927 2010 9.456147 GCTAGTATCTCTTCTAGTCATGGATTA 57.544 37.037 0.00 0.00 36.84 1.75
1928 2011 7.947332 TGCTAGTATCTCTTCTAGTCATGGATT 59.053 37.037 0.00 0.00 36.84 3.01
1929 2012 7.465960 TGCTAGTATCTCTTCTAGTCATGGAT 58.534 38.462 0.00 0.00 36.84 3.41
1930 2013 6.842676 TGCTAGTATCTCTTCTAGTCATGGA 58.157 40.000 0.00 0.00 36.84 3.41
1931 2014 7.537715 CATGCTAGTATCTCTTCTAGTCATGG 58.462 42.308 17.77 8.41 40.23 3.66
1932 2015 7.028962 GCATGCTAGTATCTCTTCTAGTCATG 58.971 42.308 11.37 19.40 42.65 3.07
1933 2016 6.718912 TGCATGCTAGTATCTCTTCTAGTCAT 59.281 38.462 20.33 0.00 36.84 3.06
1934 2017 6.064717 TGCATGCTAGTATCTCTTCTAGTCA 58.935 40.000 20.33 0.00 36.84 3.41
1935 2018 6.567687 TGCATGCTAGTATCTCTTCTAGTC 57.432 41.667 20.33 0.00 36.84 2.59
1936 2019 6.968263 TTGCATGCTAGTATCTCTTCTAGT 57.032 37.500 20.33 0.00 36.84 2.57
1939 2022 8.814931 AGATTATTGCATGCTAGTATCTCTTCT 58.185 33.333 20.33 5.38 0.00 2.85
1942 2025 8.196771 GCTAGATTATTGCATGCTAGTATCTCT 58.803 37.037 22.52 16.16 33.01 3.10
1943 2026 7.978414 TGCTAGATTATTGCATGCTAGTATCTC 59.022 37.037 22.52 14.61 34.60 2.75
1944 2027 7.845037 TGCTAGATTATTGCATGCTAGTATCT 58.155 34.615 20.33 21.74 34.60 1.98
1945 2028 8.484641 TTGCTAGATTATTGCATGCTAGTATC 57.515 34.615 20.33 16.54 39.44 2.24
1946 2029 8.725148 GTTTGCTAGATTATTGCATGCTAGTAT 58.275 33.333 20.33 8.74 39.44 2.12
1947 2030 7.933577 AGTTTGCTAGATTATTGCATGCTAGTA 59.066 33.333 20.33 6.90 39.44 1.82
1948 2031 6.769822 AGTTTGCTAGATTATTGCATGCTAGT 59.230 34.615 20.33 7.25 39.44 2.57
1949 2032 7.199541 AGTTTGCTAGATTATTGCATGCTAG 57.800 36.000 20.33 11.08 39.44 3.42
1950 2033 8.150296 TCTAGTTTGCTAGATTATTGCATGCTA 58.850 33.333 20.33 12.49 46.25 3.49
1951 2034 6.994496 TCTAGTTTGCTAGATTATTGCATGCT 59.006 34.615 20.33 1.26 46.25 3.79
1952 2035 7.194607 TCTAGTTTGCTAGATTATTGCATGC 57.805 36.000 11.82 11.82 46.25 4.06
1964 2047 5.928839 TCTTGCTGTTCTTCTAGTTTGCTAG 59.071 40.000 0.00 0.00 44.60 3.42
1965 2048 5.696724 GTCTTGCTGTTCTTCTAGTTTGCTA 59.303 40.000 0.00 0.00 0.00 3.49
1966 2049 4.513318 GTCTTGCTGTTCTTCTAGTTTGCT 59.487 41.667 0.00 0.00 0.00 3.91
1967 2050 4.273480 TGTCTTGCTGTTCTTCTAGTTTGC 59.727 41.667 0.00 0.00 0.00 3.68
1968 2051 5.991328 TGTCTTGCTGTTCTTCTAGTTTG 57.009 39.130 0.00 0.00 0.00 2.93
1969 2052 6.551385 CATGTCTTGCTGTTCTTCTAGTTT 57.449 37.500 0.00 0.00 0.00 2.66
1984 2067 2.162809 TGCTGCTGTTATGCATGTCTTG 59.837 45.455 10.16 0.00 42.48 3.02
1985 2068 2.439409 TGCTGCTGTTATGCATGTCTT 58.561 42.857 10.16 0.00 42.48 3.01
1986 2069 2.118313 TGCTGCTGTTATGCATGTCT 57.882 45.000 10.16 0.00 42.48 3.41
1987 2070 2.919229 GTTTGCTGCTGTTATGCATGTC 59.081 45.455 10.16 2.63 42.48 3.06
1988 2071 2.296752 TGTTTGCTGCTGTTATGCATGT 59.703 40.909 10.16 0.00 42.48 3.21
1989 2072 2.664568 GTGTTTGCTGCTGTTATGCATG 59.335 45.455 10.16 0.00 42.48 4.06
1990 2073 2.669113 CGTGTTTGCTGCTGTTATGCAT 60.669 45.455 3.79 3.79 42.48 3.96
1991 2074 1.334870 CGTGTTTGCTGCTGTTATGCA 60.335 47.619 0.00 0.00 41.05 3.96
1992 2075 1.330306 CGTGTTTGCTGCTGTTATGC 58.670 50.000 0.00 0.00 0.00 3.14
1993 2076 2.686558 ACGTGTTTGCTGCTGTTATG 57.313 45.000 0.00 0.00 0.00 1.90
1994 2077 3.562141 TGTTACGTGTTTGCTGCTGTTAT 59.438 39.130 0.00 0.00 0.00 1.89
1995 2078 2.937149 TGTTACGTGTTTGCTGCTGTTA 59.063 40.909 0.00 0.00 0.00 2.41
1996 2079 1.740585 TGTTACGTGTTTGCTGCTGTT 59.259 42.857 0.00 0.00 0.00 3.16
1997 2080 1.374560 TGTTACGTGTTTGCTGCTGT 58.625 45.000 0.00 0.00 0.00 4.40
1998 2081 2.466870 TTGTTACGTGTTTGCTGCTG 57.533 45.000 0.00 0.00 0.00 4.41
1999 2082 3.364964 GCTATTGTTACGTGTTTGCTGCT 60.365 43.478 0.00 0.00 0.00 4.24
2000 2083 2.908626 GCTATTGTTACGTGTTTGCTGC 59.091 45.455 0.00 0.00 0.00 5.25
2001 2084 4.151070 CAGCTATTGTTACGTGTTTGCTG 58.849 43.478 0.00 5.38 39.16 4.41
2002 2085 3.813166 ACAGCTATTGTTACGTGTTTGCT 59.187 39.130 0.00 0.00 36.31 3.91
2003 2086 4.141855 ACAGCTATTGTTACGTGTTTGC 57.858 40.909 0.00 0.00 36.31 3.68
2004 2087 6.699895 TCTACAGCTATTGTTACGTGTTTG 57.300 37.500 0.00 0.00 41.29 2.93
2005 2088 7.225145 TGTTTCTACAGCTATTGTTACGTGTTT 59.775 33.333 0.00 0.00 41.29 2.83
2006 2089 6.702723 TGTTTCTACAGCTATTGTTACGTGTT 59.297 34.615 0.00 0.00 41.29 3.32
2007 2090 6.218019 TGTTTCTACAGCTATTGTTACGTGT 58.782 36.000 0.00 0.00 41.29 4.49
2008 2091 6.699895 TGTTTCTACAGCTATTGTTACGTG 57.300 37.500 0.00 0.00 41.29 4.49
2009 2092 6.946229 CTGTTTCTACAGCTATTGTTACGT 57.054 37.500 0.00 0.00 44.81 3.57
2022 2105 5.304357 TCCTCTGTTCATGTCTGTTTCTACA 59.696 40.000 0.00 0.00 0.00 2.74
2023 2106 5.784177 TCCTCTGTTCATGTCTGTTTCTAC 58.216 41.667 0.00 0.00 0.00 2.59
2024 2107 6.014242 ACATCCTCTGTTCATGTCTGTTTCTA 60.014 38.462 0.00 0.00 32.90 2.10
2025 2108 4.963318 TCCTCTGTTCATGTCTGTTTCT 57.037 40.909 0.00 0.00 0.00 2.52
2026 2109 4.999950 ACATCCTCTGTTCATGTCTGTTTC 59.000 41.667 0.00 0.00 32.90 2.78
2027 2110 4.978099 ACATCCTCTGTTCATGTCTGTTT 58.022 39.130 0.00 0.00 32.90 2.83
2028 2111 4.630644 ACATCCTCTGTTCATGTCTGTT 57.369 40.909 0.00 0.00 32.90 3.16
2029 2112 4.321718 CAACATCCTCTGTTCATGTCTGT 58.678 43.478 0.00 0.00 44.99 3.41
2030 2113 3.688185 CCAACATCCTCTGTTCATGTCTG 59.312 47.826 0.00 0.00 44.99 3.51
2031 2114 3.584406 TCCAACATCCTCTGTTCATGTCT 59.416 43.478 0.00 0.00 44.99 3.41
2032 2115 3.686726 GTCCAACATCCTCTGTTCATGTC 59.313 47.826 0.00 0.00 44.99 3.06
2033 2116 3.679389 GTCCAACATCCTCTGTTCATGT 58.321 45.455 0.00 0.00 44.99 3.21
2034 2117 2.674852 CGTCCAACATCCTCTGTTCATG 59.325 50.000 0.00 0.00 44.99 3.07
2035 2118 2.303022 ACGTCCAACATCCTCTGTTCAT 59.697 45.455 0.00 0.00 44.99 2.57
2036 2119 1.691976 ACGTCCAACATCCTCTGTTCA 59.308 47.619 0.00 0.00 44.99 3.18
2037 2120 2.457366 ACGTCCAACATCCTCTGTTC 57.543 50.000 0.00 0.00 44.99 3.18
2039 2122 2.231478 CAGTACGTCCAACATCCTCTGT 59.769 50.000 0.00 0.00 40.84 3.41
2040 2123 2.492088 TCAGTACGTCCAACATCCTCTG 59.508 50.000 0.00 0.00 0.00 3.35
2041 2124 2.803956 TCAGTACGTCCAACATCCTCT 58.196 47.619 0.00 0.00 0.00 3.69
2042 2125 3.707793 GATCAGTACGTCCAACATCCTC 58.292 50.000 0.00 0.00 0.00 3.71
2043 2126 2.099263 CGATCAGTACGTCCAACATCCT 59.901 50.000 0.00 0.00 0.00 3.24
2044 2127 2.159282 ACGATCAGTACGTCCAACATCC 60.159 50.000 0.00 0.00 39.87 3.51
2045 2128 3.146618 ACGATCAGTACGTCCAACATC 57.853 47.619 0.00 0.00 39.87 3.06
2046 2129 3.587797 AACGATCAGTACGTCCAACAT 57.412 42.857 0.00 0.00 43.16 2.71
2047 2130 3.671433 GCTAACGATCAGTACGTCCAACA 60.671 47.826 0.00 0.00 43.16 3.33
2048 2131 2.850647 GCTAACGATCAGTACGTCCAAC 59.149 50.000 0.00 0.00 43.16 3.77
2049 2132 2.751259 AGCTAACGATCAGTACGTCCAA 59.249 45.455 0.00 0.00 43.16 3.53
2050 2133 2.362736 AGCTAACGATCAGTACGTCCA 58.637 47.619 0.00 0.00 43.16 4.02
2051 2134 4.745837 ATAGCTAACGATCAGTACGTCC 57.254 45.455 0.00 0.00 43.16 4.79
2052 2135 6.741811 CCATAATAGCTAACGATCAGTACGTC 59.258 42.308 0.00 0.00 43.16 4.34
2053 2136 6.349115 CCCATAATAGCTAACGATCAGTACGT 60.349 42.308 0.00 0.00 45.89 3.57
2054 2137 6.028368 CCCATAATAGCTAACGATCAGTACG 58.972 44.000 0.00 0.00 0.00 3.67
2055 2138 6.807230 CACCCATAATAGCTAACGATCAGTAC 59.193 42.308 0.00 0.00 0.00 2.73
2056 2139 6.571731 GCACCCATAATAGCTAACGATCAGTA 60.572 42.308 0.00 0.00 0.00 2.74
2057 2140 5.784177 CACCCATAATAGCTAACGATCAGT 58.216 41.667 0.00 0.00 0.00 3.41
2058 2141 4.627467 GCACCCATAATAGCTAACGATCAG 59.373 45.833 0.00 0.00 0.00 2.90
2059 2142 4.566004 GCACCCATAATAGCTAACGATCA 58.434 43.478 0.00 0.00 0.00 2.92
2060 2143 3.612860 CGCACCCATAATAGCTAACGATC 59.387 47.826 0.00 0.00 0.00 3.69
2061 2144 3.257375 TCGCACCCATAATAGCTAACGAT 59.743 43.478 0.00 0.00 0.00 3.73
2062 2145 2.624364 TCGCACCCATAATAGCTAACGA 59.376 45.455 0.00 0.00 0.00 3.85
2063 2146 2.729882 GTCGCACCCATAATAGCTAACG 59.270 50.000 0.00 0.00 0.00 3.18
2064 2147 3.724374 TGTCGCACCCATAATAGCTAAC 58.276 45.455 0.00 0.00 0.00 2.34
2065 2148 3.386726 ACTGTCGCACCCATAATAGCTAA 59.613 43.478 0.00 0.00 0.00 3.09
2066 2149 2.963101 ACTGTCGCACCCATAATAGCTA 59.037 45.455 0.00 0.00 0.00 3.32
2067 2150 1.762957 ACTGTCGCACCCATAATAGCT 59.237 47.619 0.00 0.00 0.00 3.32
2068 2151 1.867233 CACTGTCGCACCCATAATAGC 59.133 52.381 0.00 0.00 0.00 2.97
2069 2152 3.179443 ACACTGTCGCACCCATAATAG 57.821 47.619 0.00 0.00 0.00 1.73
2070 2153 3.055747 TCAACACTGTCGCACCCATAATA 60.056 43.478 0.00 0.00 0.00 0.98
2071 2154 2.083774 CAACACTGTCGCACCCATAAT 58.916 47.619 0.00 0.00 0.00 1.28
2072 2155 1.070914 TCAACACTGTCGCACCCATAA 59.929 47.619 0.00 0.00 0.00 1.90
2073 2156 0.682292 TCAACACTGTCGCACCCATA 59.318 50.000 0.00 0.00 0.00 2.74
2074 2157 0.036732 ATCAACACTGTCGCACCCAT 59.963 50.000 0.00 0.00 0.00 4.00
2075 2158 0.884259 CATCAACACTGTCGCACCCA 60.884 55.000 0.00 0.00 0.00 4.51
2076 2159 0.602638 TCATCAACACTGTCGCACCC 60.603 55.000 0.00 0.00 0.00 4.61
2077 2160 0.512952 GTCATCAACACTGTCGCACC 59.487 55.000 0.00 0.00 0.00 5.01
2078 2161 0.161658 CGTCATCAACACTGTCGCAC 59.838 55.000 0.00 0.00 0.00 5.34
2079 2162 0.031449 TCGTCATCAACACTGTCGCA 59.969 50.000 0.00 0.00 0.00 5.10
2080 2163 1.059692 CATCGTCATCAACACTGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
2081 2164 2.328473 ACATCGTCATCAACACTGTCG 58.672 47.619 0.00 0.00 0.00 4.35
2082 2165 3.120546 CCAACATCGTCATCAACACTGTC 60.121 47.826 0.00 0.00 0.00 3.51
2083 2166 2.807967 CCAACATCGTCATCAACACTGT 59.192 45.455 0.00 0.00 0.00 3.55
2084 2167 2.413239 GCCAACATCGTCATCAACACTG 60.413 50.000 0.00 0.00 0.00 3.66
2085 2168 1.806542 GCCAACATCGTCATCAACACT 59.193 47.619 0.00 0.00 0.00 3.55
2086 2169 1.464023 CGCCAACATCGTCATCAACAC 60.464 52.381 0.00 0.00 0.00 3.32
2087 2170 0.795698 CGCCAACATCGTCATCAACA 59.204 50.000 0.00 0.00 0.00 3.33
2088 2171 1.075542 TCGCCAACATCGTCATCAAC 58.924 50.000 0.00 0.00 0.00 3.18
2089 2172 1.075542 GTCGCCAACATCGTCATCAA 58.924 50.000 0.00 0.00 0.00 2.57
2090 2173 1.075979 CGTCGCCAACATCGTCATCA 61.076 55.000 0.00 0.00 0.00 3.07
2091 2174 0.800683 TCGTCGCCAACATCGTCATC 60.801 55.000 0.00 0.00 0.00 2.92
2092 2175 0.179111 ATCGTCGCCAACATCGTCAT 60.179 50.000 0.00 0.00 0.00 3.06
2093 2176 0.800683 GATCGTCGCCAACATCGTCA 60.801 55.000 0.00 0.00 0.00 4.35
2094 2177 0.525668 AGATCGTCGCCAACATCGTC 60.526 55.000 0.00 0.00 0.00 4.20
2095 2178 0.802222 CAGATCGTCGCCAACATCGT 60.802 55.000 0.00 0.00 0.00 3.73
2096 2179 1.920051 CAGATCGTCGCCAACATCG 59.080 57.895 0.00 0.00 0.00 3.84
2097 2180 0.807667 AGCAGATCGTCGCCAACATC 60.808 55.000 1.78 0.00 0.00 3.06
2098 2181 1.086067 CAGCAGATCGTCGCCAACAT 61.086 55.000 1.78 0.00 0.00 2.71
2099 2182 1.737735 CAGCAGATCGTCGCCAACA 60.738 57.895 1.78 0.00 0.00 3.33
2100 2183 3.084579 CAGCAGATCGTCGCCAAC 58.915 61.111 1.78 0.00 0.00 3.77
2101 2184 2.815211 GCAGCAGATCGTCGCCAA 60.815 61.111 1.78 0.00 0.00 4.52
2102 2185 3.763356 AGCAGCAGATCGTCGCCA 61.763 61.111 0.00 0.00 0.00 5.69
2103 2186 3.260483 CAGCAGCAGATCGTCGCC 61.260 66.667 0.00 0.00 0.00 5.54
2104 2187 2.202663 TCAGCAGCAGATCGTCGC 60.203 61.111 0.00 0.00 0.00 5.19
2105 2188 2.220224 CGTCAGCAGCAGATCGTCG 61.220 63.158 0.00 0.00 0.00 5.12
2106 2189 1.875813 CCGTCAGCAGCAGATCGTC 60.876 63.158 0.00 0.00 0.00 4.20
2107 2190 2.182791 CCGTCAGCAGCAGATCGT 59.817 61.111 0.00 0.00 0.00 3.73
2108 2191 3.260483 GCCGTCAGCAGCAGATCG 61.260 66.667 0.00 0.00 42.97 3.69
2109 2192 2.967929 ATCGCCGTCAGCAGCAGATC 62.968 60.000 0.00 0.00 44.04 2.75
2110 2193 3.086391 ATCGCCGTCAGCAGCAGAT 62.086 57.895 0.00 0.00 44.04 2.90
2111 2194 3.763356 ATCGCCGTCAGCAGCAGA 61.763 61.111 0.00 0.00 44.04 4.26
2112 2195 3.561213 CATCGCCGTCAGCAGCAG 61.561 66.667 0.00 0.00 44.04 4.24
2113 2196 2.857575 ATTCATCGCCGTCAGCAGCA 62.858 55.000 0.00 0.00 44.04 4.41
2114 2197 0.875908 TATTCATCGCCGTCAGCAGC 60.876 55.000 0.00 0.00 44.04 5.25
2115 2198 0.855349 GTATTCATCGCCGTCAGCAG 59.145 55.000 0.00 0.00 44.04 4.24
2116 2199 0.869880 CGTATTCATCGCCGTCAGCA 60.870 55.000 0.00 0.00 44.04 4.41
2117 2200 0.594028 TCGTATTCATCGCCGTCAGC 60.594 55.000 0.00 0.00 38.52 4.26
2118 2201 1.121240 GTCGTATTCATCGCCGTCAG 58.879 55.000 0.00 0.00 0.00 3.51
2119 2202 0.590481 CGTCGTATTCATCGCCGTCA 60.590 55.000 0.00 0.00 0.00 4.35
2120 2203 0.316442 TCGTCGTATTCATCGCCGTC 60.316 55.000 0.00 0.00 31.87 4.79
2121 2204 0.309922 ATCGTCGTATTCATCGCCGT 59.690 50.000 0.00 0.00 31.87 5.68
2122 2205 0.702924 CATCGTCGTATTCATCGCCG 59.297 55.000 0.00 0.00 0.00 6.46
2123 2206 1.979469 CTCATCGTCGTATTCATCGCC 59.021 52.381 0.00 0.00 0.00 5.54
2124 2207 2.651701 ACTCATCGTCGTATTCATCGC 58.348 47.619 0.00 0.00 0.00 4.58
2125 2208 3.841317 GCTACTCATCGTCGTATTCATCG 59.159 47.826 0.00 0.00 0.00 3.84
2126 2209 4.613448 GTGCTACTCATCGTCGTATTCATC 59.387 45.833 0.00 0.00 0.00 2.92
2127 2210 4.537965 GTGCTACTCATCGTCGTATTCAT 58.462 43.478 0.00 0.00 0.00 2.57
2128 2211 3.242969 GGTGCTACTCATCGTCGTATTCA 60.243 47.826 0.00 0.00 0.00 2.57
2129 2212 3.298317 GGTGCTACTCATCGTCGTATTC 58.702 50.000 0.00 0.00 0.00 1.75
2130 2213 2.286831 CGGTGCTACTCATCGTCGTATT 60.287 50.000 0.00 0.00 43.96 1.89
2131 2214 1.263484 CGGTGCTACTCATCGTCGTAT 59.737 52.381 0.00 0.00 43.96 3.06
2132 2215 0.654160 CGGTGCTACTCATCGTCGTA 59.346 55.000 0.00 0.00 43.96 3.43
2133 2216 1.428219 CGGTGCTACTCATCGTCGT 59.572 57.895 0.00 0.00 43.96 4.34
2134 2217 4.286967 CGGTGCTACTCATCGTCG 57.713 61.111 0.00 0.00 43.96 5.12
2138 2221 2.279517 CGGGCGGTGCTACTCATC 60.280 66.667 0.00 0.00 0.00 2.92
2139 2222 2.758327 TCGGGCGGTGCTACTCAT 60.758 61.111 0.00 0.00 0.00 2.90
2140 2223 3.755628 GTCGGGCGGTGCTACTCA 61.756 66.667 0.00 0.00 0.00 3.41
2141 2224 3.003113 AAGTCGGGCGGTGCTACTC 62.003 63.158 0.00 0.00 0.00 2.59
2142 2225 2.995574 AAGTCGGGCGGTGCTACT 60.996 61.111 0.00 0.00 0.00 2.57
2143 2226 2.813908 CAAGTCGGGCGGTGCTAC 60.814 66.667 0.00 0.00 0.00 3.58
2144 2227 4.077184 CCAAGTCGGGCGGTGCTA 62.077 66.667 0.00 0.00 0.00 3.49
2151 2234 2.434359 CTTCCGTCCAAGTCGGGC 60.434 66.667 4.58 0.00 46.82 6.13
2152 2235 1.080025 GTCTTCCGTCCAAGTCGGG 60.080 63.158 4.58 0.00 46.82 5.14
2154 2237 0.728466 GTCGTCTTCCGTCCAAGTCG 60.728 60.000 0.00 0.00 36.60 4.18
2155 2238 0.388263 GGTCGTCTTCCGTCCAAGTC 60.388 60.000 0.00 0.00 43.20 3.01
2156 2239 1.664306 GGTCGTCTTCCGTCCAAGT 59.336 57.895 0.00 0.00 43.20 3.16
2157 2240 1.080025 GGGTCGTCTTCCGTCCAAG 60.080 63.158 0.00 0.00 45.15 3.61
2158 2241 2.922950 CGGGTCGTCTTCCGTCCAA 61.923 63.158 0.00 0.00 45.15 3.53
2159 2242 3.367743 CGGGTCGTCTTCCGTCCA 61.368 66.667 0.00 0.00 45.15 4.02
2164 2247 0.458025 GTCATCACGGGTCGTCTTCC 60.458 60.000 0.00 0.00 38.32 3.46
2165 2248 0.797249 CGTCATCACGGGTCGTCTTC 60.797 60.000 0.00 0.00 42.73 2.87
2166 2249 1.211969 CGTCATCACGGGTCGTCTT 59.788 57.895 0.00 0.00 42.73 3.01
2167 2250 1.239296 TTCGTCATCACGGGTCGTCT 61.239 55.000 0.00 0.00 46.70 4.18
2168 2251 0.179145 ATTCGTCATCACGGGTCGTC 60.179 55.000 0.00 0.00 46.70 4.20
2169 2252 0.245539 AATTCGTCATCACGGGTCGT 59.754 50.000 0.00 0.00 46.70 4.34
2170 2253 1.060553 CAAATTCGTCATCACGGGTCG 59.939 52.381 0.00 0.00 46.70 4.79
2171 2254 2.343101 TCAAATTCGTCATCACGGGTC 58.657 47.619 0.00 0.00 46.70 4.46
2172 2255 2.346803 CTCAAATTCGTCATCACGGGT 58.653 47.619 0.00 0.00 46.70 5.28
2173 2256 1.062587 GCTCAAATTCGTCATCACGGG 59.937 52.381 0.00 0.00 46.70 5.28
2174 2257 1.731709 TGCTCAAATTCGTCATCACGG 59.268 47.619 0.00 0.00 46.70 4.94
2176 2259 3.482598 CGACTGCTCAAATTCGTCATCAC 60.483 47.826 0.00 0.00 0.00 3.06
2177 2260 2.667969 CGACTGCTCAAATTCGTCATCA 59.332 45.455 0.00 0.00 0.00 3.07
2178 2261 2.535732 GCGACTGCTCAAATTCGTCATC 60.536 50.000 0.00 0.00 38.39 2.92
2179 2262 1.394917 GCGACTGCTCAAATTCGTCAT 59.605 47.619 0.00 0.00 38.39 3.06
2180 2263 0.790207 GCGACTGCTCAAATTCGTCA 59.210 50.000 0.00 0.00 38.39 4.35
2181 2264 0.246912 CGCGACTGCTCAAATTCGTC 60.247 55.000 0.00 0.00 39.65 4.20
2182 2265 1.781555 CGCGACTGCTCAAATTCGT 59.218 52.632 0.00 0.00 39.65 3.85
2183 2266 1.578618 GCGCGACTGCTCAAATTCG 60.579 57.895 12.10 0.00 39.65 3.34
2184 2267 0.790866 GTGCGCGACTGCTCAAATTC 60.791 55.000 12.10 0.00 37.61 2.17
2185 2268 1.207593 GTGCGCGACTGCTCAAATT 59.792 52.632 12.10 0.00 37.61 1.82
2186 2269 1.904852 CTGTGCGCGACTGCTCAAAT 61.905 55.000 12.10 0.00 37.61 2.32
2187 2270 2.587473 TGTGCGCGACTGCTCAAA 60.587 55.556 12.10 0.00 37.61 2.69
2188 2271 3.037833 CTGTGCGCGACTGCTCAA 61.038 61.111 12.10 0.00 37.61 3.02
2200 2283 1.067250 TTTTTGGGAAGCGCTGTGC 59.933 52.632 12.58 4.76 46.98 4.57
2201 2284 0.597377 GGTTTTTGGGAAGCGCTGTG 60.597 55.000 12.58 0.00 0.00 3.66
2202 2285 0.755327 AGGTTTTTGGGAAGCGCTGT 60.755 50.000 12.58 0.03 32.52 4.40
2203 2286 1.243902 TAGGTTTTTGGGAAGCGCTG 58.756 50.000 12.58 0.00 32.52 5.18
2204 2287 1.989706 TTAGGTTTTTGGGAAGCGCT 58.010 45.000 2.64 2.64 32.52 5.92
2205 2288 3.250744 GAATTAGGTTTTTGGGAAGCGC 58.749 45.455 0.00 0.00 32.52 5.92
2206 2289 3.057806 ACGAATTAGGTTTTTGGGAAGCG 60.058 43.478 0.00 0.00 32.52 4.68
2207 2290 4.482386 GACGAATTAGGTTTTTGGGAAGC 58.518 43.478 0.00 0.00 0.00 3.86
2208 2291 4.765339 AGGACGAATTAGGTTTTTGGGAAG 59.235 41.667 0.00 0.00 0.00 3.46
2209 2292 4.732065 AGGACGAATTAGGTTTTTGGGAA 58.268 39.130 0.00 0.00 0.00 3.97
2210 2293 4.042435 AGAGGACGAATTAGGTTTTTGGGA 59.958 41.667 0.00 0.00 0.00 4.37
2211 2294 4.332828 AGAGGACGAATTAGGTTTTTGGG 58.667 43.478 0.00 0.00 0.00 4.12
2212 2295 4.395231 GGAGAGGACGAATTAGGTTTTTGG 59.605 45.833 0.00 0.00 0.00 3.28
2213 2296 4.395231 GGGAGAGGACGAATTAGGTTTTTG 59.605 45.833 0.00 0.00 0.00 2.44
2214 2297 4.586884 GGGAGAGGACGAATTAGGTTTTT 58.413 43.478 0.00 0.00 0.00 1.94
2215 2298 3.369157 CGGGAGAGGACGAATTAGGTTTT 60.369 47.826 0.00 0.00 0.00 2.43
2216 2299 2.167900 CGGGAGAGGACGAATTAGGTTT 59.832 50.000 0.00 0.00 0.00 3.27
2217 2300 1.755380 CGGGAGAGGACGAATTAGGTT 59.245 52.381 0.00 0.00 0.00 3.50
2218 2301 1.400737 CGGGAGAGGACGAATTAGGT 58.599 55.000 0.00 0.00 0.00 3.08
2219 2302 0.674534 CCGGGAGAGGACGAATTAGG 59.325 60.000 0.00 0.00 0.00 2.69
2220 2303 1.067212 CACCGGGAGAGGACGAATTAG 59.933 57.143 6.32 0.00 34.73 1.73
2221 2304 1.108776 CACCGGGAGAGGACGAATTA 58.891 55.000 6.32 0.00 34.73 1.40
2222 2305 1.898154 CACCGGGAGAGGACGAATT 59.102 57.895 6.32 0.00 34.73 2.17
2223 2306 2.722201 GCACCGGGAGAGGACGAAT 61.722 63.158 6.32 0.00 34.73 3.34
2224 2307 3.379445 GCACCGGGAGAGGACGAA 61.379 66.667 6.32 0.00 34.73 3.85
2225 2308 4.671590 TGCACCGGGAGAGGACGA 62.672 66.667 6.32 0.00 34.73 4.20
2226 2309 4.135153 CTGCACCGGGAGAGGACG 62.135 72.222 6.32 0.00 33.71 4.79
2227 2310 3.775654 CCTGCACCGGGAGAGGAC 61.776 72.222 6.32 0.00 33.71 3.85
2228 2311 3.317436 ATCCTGCACCGGGAGAGGA 62.317 63.158 17.18 17.18 42.74 3.71
2229 2312 2.765807 ATCCTGCACCGGGAGAGG 60.766 66.667 6.32 7.55 42.74 3.69
2230 2313 2.818132 GATCCTGCACCGGGAGAG 59.182 66.667 6.32 0.00 42.74 3.20
2231 2314 3.147595 CGATCCTGCACCGGGAGA 61.148 66.667 6.32 0.00 42.74 3.71
2232 2315 4.899239 GCGATCCTGCACCGGGAG 62.899 72.222 6.32 0.00 42.74 4.30
2234 2317 4.776322 TTGCGATCCTGCACCGGG 62.776 66.667 6.32 0.00 46.25 5.73
2235 2318 2.745884 TTTGCGATCCTGCACCGG 60.746 61.111 0.00 0.00 46.25 5.28
2236 2319 1.741401 TCTTTGCGATCCTGCACCG 60.741 57.895 0.00 0.00 46.25 4.94
2237 2320 1.796796 GTCTTTGCGATCCTGCACC 59.203 57.895 0.00 0.00 46.25 5.01
2238 2321 1.014044 TCGTCTTTGCGATCCTGCAC 61.014 55.000 0.00 0.00 46.25 4.57
2239 2322 0.320334 TTCGTCTTTGCGATCCTGCA 60.320 50.000 0.00 0.00 44.61 4.41
2240 2323 0.095417 GTTCGTCTTTGCGATCCTGC 59.905 55.000 0.00 0.00 40.76 4.85
2241 2324 0.366871 CGTTCGTCTTTGCGATCCTG 59.633 55.000 0.00 0.00 40.76 3.86
2242 2325 0.736325 CCGTTCGTCTTTGCGATCCT 60.736 55.000 0.00 0.00 40.76 3.24
2243 2326 1.012486 ACCGTTCGTCTTTGCGATCC 61.012 55.000 0.00 0.00 40.76 3.36
2244 2327 0.788391 AACCGTTCGTCTTTGCGATC 59.212 50.000 0.00 0.00 40.76 3.69
2245 2328 0.788391 GAACCGTTCGTCTTTGCGAT 59.212 50.000 0.00 0.00 40.76 4.58
2246 2329 1.216941 GGAACCGTTCGTCTTTGCGA 61.217 55.000 5.19 0.00 39.28 5.10
2247 2330 1.203313 GGAACCGTTCGTCTTTGCG 59.797 57.895 5.19 0.00 0.00 4.85
2248 2331 1.203313 CGGAACCGTTCGTCTTTGC 59.797 57.895 4.99 0.00 34.35 3.68
2249 2332 0.598158 TCCGGAACCGTTCGTCTTTG 60.598 55.000 0.00 0.00 37.81 2.77
2250 2333 0.319297 CTCCGGAACCGTTCGTCTTT 60.319 55.000 5.23 0.00 37.81 2.52
2251 2334 1.174712 TCTCCGGAACCGTTCGTCTT 61.175 55.000 5.23 0.00 37.81 3.01
2252 2335 1.601759 TCTCCGGAACCGTTCGTCT 60.602 57.895 5.23 0.00 37.81 4.18
2253 2336 1.443363 GTCTCCGGAACCGTTCGTC 60.443 63.158 5.23 0.00 37.81 4.20
2254 2337 2.647297 GTCTCCGGAACCGTTCGT 59.353 61.111 5.23 0.00 37.81 3.85
2255 2338 2.126189 GGTCTCCGGAACCGTTCG 60.126 66.667 16.67 0.00 37.81 3.95
2256 2339 1.080025 CAGGTCTCCGGAACCGTTC 60.080 63.158 22.22 2.37 37.81 3.95
2257 2340 3.057337 CAGGTCTCCGGAACCGTT 58.943 61.111 22.22 9.70 37.81 4.44
2258 2341 3.692406 GCAGGTCTCCGGAACCGT 61.692 66.667 22.22 9.12 37.81 4.83
2259 2342 3.358076 GAGCAGGTCTCCGGAACCG 62.358 68.421 22.22 18.77 35.77 4.44
2260 2343 1.950973 GAGAGCAGGTCTCCGGAACC 61.951 65.000 21.45 21.45 45.57 3.62
2261 2344 1.513622 GAGAGCAGGTCTCCGGAAC 59.486 63.158 17.60 6.92 45.57 3.62
2262 2345 4.019983 GAGAGCAGGTCTCCGGAA 57.980 61.111 17.60 0.00 45.57 4.30
2268 2351 3.386237 GCGTGGGAGAGCAGGTCT 61.386 66.667 0.40 0.40 38.71 3.85
2269 2352 4.803426 CGCGTGGGAGAGCAGGTC 62.803 72.222 0.00 0.00 0.00 3.85
2297 2380 2.246761 TACTCCATCCCAAACGCCGG 62.247 60.000 0.00 0.00 0.00 6.13
2298 2381 0.810031 CTACTCCATCCCAAACGCCG 60.810 60.000 0.00 0.00 0.00 6.46
2299 2382 0.539986 TCTACTCCATCCCAAACGCC 59.460 55.000 0.00 0.00 0.00 5.68
2300 2383 1.207329 AGTCTACTCCATCCCAAACGC 59.793 52.381 0.00 0.00 0.00 4.84
2301 2384 3.488721 CGTAGTCTACTCCATCCCAAACG 60.489 52.174 8.37 0.00 0.00 3.60
2302 2385 3.698040 TCGTAGTCTACTCCATCCCAAAC 59.302 47.826 8.37 0.00 0.00 2.93
2303 2386 3.972133 TCGTAGTCTACTCCATCCCAAA 58.028 45.455 8.37 0.00 0.00 3.28
2304 2387 3.657398 TCGTAGTCTACTCCATCCCAA 57.343 47.619 8.37 0.00 0.00 4.12
2305 2388 3.487372 CATCGTAGTCTACTCCATCCCA 58.513 50.000 8.37 0.00 0.00 4.37
2306 2389 2.820787 CCATCGTAGTCTACTCCATCCC 59.179 54.545 8.37 0.00 0.00 3.85
2307 2390 2.229302 GCCATCGTAGTCTACTCCATCC 59.771 54.545 8.37 0.00 0.00 3.51
2308 2391 2.095668 CGCCATCGTAGTCTACTCCATC 60.096 54.545 8.37 0.00 0.00 3.51
2309 2392 1.880675 CGCCATCGTAGTCTACTCCAT 59.119 52.381 8.37 0.00 0.00 3.41
2310 2393 1.306148 CGCCATCGTAGTCTACTCCA 58.694 55.000 8.37 0.00 0.00 3.86
2311 2394 0.592148 CCGCCATCGTAGTCTACTCC 59.408 60.000 8.37 0.00 0.00 3.85
2312 2395 0.040246 GCCGCCATCGTAGTCTACTC 60.040 60.000 8.37 0.00 0.00 2.59
2313 2396 1.783031 CGCCGCCATCGTAGTCTACT 61.783 60.000 8.37 0.00 0.00 2.57
2314 2397 1.370172 CGCCGCCATCGTAGTCTAC 60.370 63.158 0.00 0.00 0.00 2.59
2315 2398 3.028130 CGCCGCCATCGTAGTCTA 58.972 61.111 0.00 0.00 0.00 2.59
2316 2399 4.570663 GCGCCGCCATCGTAGTCT 62.571 66.667 0.00 0.00 0.00 3.24
2317 2400 4.865761 TGCGCCGCCATCGTAGTC 62.866 66.667 6.63 0.00 0.00 2.59
2318 2401 4.444838 TTGCGCCGCCATCGTAGT 62.445 61.111 6.63 0.00 0.00 2.73
2319 2402 3.630148 CTTGCGCCGCCATCGTAG 61.630 66.667 6.63 0.00 0.00 3.51
2320 2403 3.943479 AACTTGCGCCGCCATCGTA 62.943 57.895 6.63 0.00 0.00 3.43
2322 2405 4.817063 CAACTTGCGCCGCCATCG 62.817 66.667 6.63 0.00 0.00 3.84
2323 2406 3.737172 ACAACTTGCGCCGCCATC 61.737 61.111 6.63 0.00 0.00 3.51
2324 2407 4.041917 CACAACTTGCGCCGCCAT 62.042 61.111 6.63 0.00 0.00 4.40
2326 2409 4.389576 CTCACAACTTGCGCCGCC 62.390 66.667 6.63 0.00 0.00 6.13
2327 2410 2.680913 ATCTCACAACTTGCGCCGC 61.681 57.895 4.18 0.00 0.00 6.53
2328 2411 1.133253 CATCTCACAACTTGCGCCG 59.867 57.895 4.18 0.00 0.00 6.46
2329 2412 0.445436 CTCATCTCACAACTTGCGCC 59.555 55.000 4.18 0.00 0.00 6.53
2330 2413 0.445436 CCTCATCTCACAACTTGCGC 59.555 55.000 0.00 0.00 0.00 6.09
2331 2414 0.445436 GCCTCATCTCACAACTTGCG 59.555 55.000 0.00 0.00 0.00 4.85
2332 2415 1.527034 TGCCTCATCTCACAACTTGC 58.473 50.000 0.00 0.00 0.00 4.01
2333 2416 4.293415 GTTTTGCCTCATCTCACAACTTG 58.707 43.478 0.00 0.00 0.00 3.16
2334 2417 3.319122 GGTTTTGCCTCATCTCACAACTT 59.681 43.478 0.00 0.00 0.00 2.66
2335 2418 2.887152 GGTTTTGCCTCATCTCACAACT 59.113 45.455 0.00 0.00 0.00 3.16
2336 2419 2.029918 GGGTTTTGCCTCATCTCACAAC 60.030 50.000 0.00 0.00 37.43 3.32
2337 2420 2.158475 AGGGTTTTGCCTCATCTCACAA 60.158 45.455 0.00 0.00 37.43 3.33
2338 2421 1.425066 AGGGTTTTGCCTCATCTCACA 59.575 47.619 0.00 0.00 37.43 3.58
2339 2422 2.206576 AGGGTTTTGCCTCATCTCAC 57.793 50.000 0.00 0.00 37.43 3.51
2340 2423 2.239654 CCTAGGGTTTTGCCTCATCTCA 59.760 50.000 0.00 0.00 37.43 3.27
2341 2424 2.239907 ACCTAGGGTTTTGCCTCATCTC 59.760 50.000 14.81 0.00 37.43 2.75
2342 2425 2.025887 CACCTAGGGTTTTGCCTCATCT 60.026 50.000 14.81 0.00 37.43 2.90
2343 2426 2.290960 ACACCTAGGGTTTTGCCTCATC 60.291 50.000 14.81 0.00 37.43 2.92
2344 2427 1.710809 ACACCTAGGGTTTTGCCTCAT 59.289 47.619 14.81 0.00 37.43 2.90
2345 2428 1.145571 ACACCTAGGGTTTTGCCTCA 58.854 50.000 14.81 0.00 37.43 3.86
2346 2429 2.287977 AACACCTAGGGTTTTGCCTC 57.712 50.000 14.81 0.00 37.43 4.70
2347 2430 2.767644 AAACACCTAGGGTTTTGCCT 57.232 45.000 14.81 0.00 35.01 4.75
2348 2431 3.724374 GAAAAACACCTAGGGTTTTGCC 58.276 45.455 27.61 21.51 45.02 4.52
2349 2432 3.377439 CGAAAAACACCTAGGGTTTTGC 58.623 45.455 27.61 25.67 45.02 3.68
2350 2433 3.382227 ACCGAAAAACACCTAGGGTTTTG 59.618 43.478 27.61 21.15 45.02 2.44
2352 2435 2.953648 CACCGAAAAACACCTAGGGTTT 59.046 45.455 14.81 16.62 39.99 3.27
2353 2436 2.092267 ACACCGAAAAACACCTAGGGTT 60.092 45.455 14.81 11.50 31.02 4.11
2354 2437 1.491754 ACACCGAAAAACACCTAGGGT 59.508 47.619 14.81 5.35 35.62 4.34
2355 2438 2.265589 ACACCGAAAAACACCTAGGG 57.734 50.000 14.81 4.64 0.00 3.53



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.