Multiple sequence alignment - TraesCS2D01G158400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G158400 chr2D 100.000 5363 0 0 1 5363 102086724 102081362 0.000000e+00 9904.0
1 TraesCS2D01G158400 chr2D 83.710 442 28 20 4907 5345 537490969 537491369 1.410000e-100 377.0
2 TraesCS2D01G158400 chr2B 90.717 2413 155 28 2536 4912 153225648 153223269 0.000000e+00 3151.0
3 TraesCS2D01G158400 chr2B 88.660 2037 130 50 564 2539 153227670 153225674 0.000000e+00 2388.0
4 TraesCS2D01G158400 chr2B 90.749 454 35 4 4912 5362 725732165 725732614 2.760000e-167 599.0
5 TraesCS2D01G158400 chr2B 90.030 331 16 8 90 410 153228088 153227765 3.870000e-111 412.0
6 TraesCS2D01G158400 chr2B 82.759 87 11 4 5171 5255 751333229 751333145 2.070000e-09 75.0
7 TraesCS2D01G158400 chr2A 90.746 2172 122 23 2539 4684 101096096 101093978 0.000000e+00 2824.0
8 TraesCS2D01G158400 chr2A 90.596 1276 61 21 1294 2539 101097371 101096125 0.000000e+00 1637.0
9 TraesCS2D01G158400 chr2A 84.350 754 40 29 485 1215 101098200 101097502 0.000000e+00 667.0
10 TraesCS2D01G158400 chr2A 91.414 198 7 2 4725 4912 101093975 101093778 4.120000e-66 263.0
11 TraesCS2D01G158400 chr2A 78.696 230 17 12 271 492 101098715 101098510 2.030000e-24 124.0
12 TraesCS2D01G158400 chr1B 91.247 457 33 5 4909 5362 416580296 416580748 2.740000e-172 616.0
13 TraesCS2D01G158400 chr7B 90.426 470 34 8 4900 5362 245853060 245853525 4.590000e-170 608.0
14 TraesCS2D01G158400 chr6B 90.949 453 36 3 4912 5362 490207611 490207162 5.940000e-169 604.0
15 TraesCS2D01G158400 chr6B 90.566 53 4 1 4897 4948 564989754 564989702 9.640000e-08 69.4
16 TraesCS2D01G158400 chrUn 88.136 472 30 11 4912 5361 9993411 9992944 6.110000e-149 538.0
17 TraesCS2D01G158400 chr7D 93.594 281 12 4 4912 5190 213792535 213792811 1.070000e-111 414.0
18 TraesCS2D01G158400 chr4A 90.036 281 22 4 4912 5190 231098371 231098647 5.110000e-95 359.0
19 TraesCS2D01G158400 chr5A 83.704 270 39 4 4945 5210 429122523 429122791 3.210000e-62 250.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G158400 chr2D 102081362 102086724 5362 True 9904.000000 9904 100.000000 1 5363 1 chr2D.!!$R1 5362
1 TraesCS2D01G158400 chr2B 153223269 153228088 4819 True 1983.666667 3151 89.802333 90 4912 3 chr2B.!!$R2 4822
2 TraesCS2D01G158400 chr2A 101093778 101098715 4937 True 1103.000000 2824 87.160400 271 4912 5 chr2A.!!$R1 4641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
516 882 0.036388 CCCCGAAAAGCTAGCACTGA 60.036 55.000 18.83 0.0 0.00 3.41 F
564 930 0.178992 CTGAGCTTTTCACCACCCCA 60.179 55.000 0.00 0.0 0.00 4.96 F
1536 2041 0.182299 GATCTAGCCTTGCCTTGCCT 59.818 55.000 0.00 0.0 0.00 4.75 F
1538 2043 0.322816 TCTAGCCTTGCCTTGCCTTG 60.323 55.000 0.00 0.0 0.00 3.61 F
1757 2263 0.445436 CGGTGCTGAACTGCTGATTC 59.555 55.000 0.00 0.0 0.00 2.52 F
2736 3278 1.202302 GCTTCAGGCCTTTATTTCCGC 60.202 52.381 0.00 0.0 34.27 5.54 F
3945 4504 0.250338 ACGCTGTGAAGGGTTTCTCC 60.250 55.000 0.00 0.0 34.31 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 2321 0.605319 TCCAAAGCAGTTGCCGGTAG 60.605 55.000 1.90 0.0 43.38 3.18 R
2109 2619 1.816224 GGCATTTACAATCCGTGGTGT 59.184 47.619 0.00 0.0 0.00 4.16 R
2772 3314 0.904394 AACGCATTCCTTGGGCCATT 60.904 50.000 7.26 0.0 41.83 3.16 R
2874 3417 1.562475 GGGCCTGGTGGTATCAAGTTA 59.438 52.381 0.84 0.0 35.27 2.24 R
3544 4099 2.970324 GGCAACACGTTCTGCGGA 60.970 61.111 11.43 0.0 46.52 5.54 R
3969 4528 1.069973 TGCGCGAAACAAGAGTTGATG 60.070 47.619 12.10 0.0 38.17 3.07 R
4912 5508 0.102481 ACGCACGGGCATTCTACTAG 59.898 55.000 11.77 0.0 41.24 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.875544 TTTCGGAAGCATGTATAGTTGC 57.124 40.909 0.00 0.00 39.17 4.17
48 49 2.833794 TCGGAAGCATGTATAGTTGCC 58.166 47.619 0.00 0.00 39.72 4.52
49 50 2.169561 TCGGAAGCATGTATAGTTGCCA 59.830 45.455 0.00 0.00 39.72 4.92
50 51 2.287915 CGGAAGCATGTATAGTTGCCAC 59.712 50.000 0.00 0.00 39.72 5.01
51 52 3.545703 GGAAGCATGTATAGTTGCCACT 58.454 45.455 0.00 0.00 39.72 4.00
52 53 4.703897 GGAAGCATGTATAGTTGCCACTA 58.296 43.478 0.00 0.00 39.72 2.74
53 54 5.123227 GGAAGCATGTATAGTTGCCACTAA 58.877 41.667 1.22 0.00 39.05 2.24
54 55 5.007724 GGAAGCATGTATAGTTGCCACTAAC 59.992 44.000 1.22 3.22 39.05 2.34
55 56 5.097742 AGCATGTATAGTTGCCACTAACA 57.902 39.130 1.22 8.20 39.05 2.41
56 57 5.496556 AGCATGTATAGTTGCCACTAACAA 58.503 37.500 1.22 0.00 39.05 2.83
57 58 5.943416 AGCATGTATAGTTGCCACTAACAAA 59.057 36.000 1.22 0.00 39.05 2.83
58 59 6.027749 GCATGTATAGTTGCCACTAACAAAC 58.972 40.000 1.22 0.12 39.05 2.93
59 60 6.348950 GCATGTATAGTTGCCACTAACAAACA 60.349 38.462 1.22 5.30 39.05 2.83
60 61 6.795098 TGTATAGTTGCCACTAACAAACAG 57.205 37.500 1.22 0.00 39.05 3.16
61 62 5.703592 TGTATAGTTGCCACTAACAAACAGG 59.296 40.000 1.22 0.00 39.05 4.00
62 63 3.012934 AGTTGCCACTAACAAACAGGT 57.987 42.857 0.00 0.00 33.02 4.00
63 64 2.949644 AGTTGCCACTAACAAACAGGTC 59.050 45.455 0.00 0.00 33.02 3.85
64 65 2.685897 GTTGCCACTAACAAACAGGTCA 59.314 45.455 0.00 0.00 0.00 4.02
65 66 2.571212 TGCCACTAACAAACAGGTCAG 58.429 47.619 0.00 0.00 0.00 3.51
66 67 2.092646 TGCCACTAACAAACAGGTCAGT 60.093 45.455 0.00 0.00 0.00 3.41
67 68 3.134985 TGCCACTAACAAACAGGTCAGTA 59.865 43.478 0.00 0.00 0.00 2.74
68 69 4.131596 GCCACTAACAAACAGGTCAGTAA 58.868 43.478 0.00 0.00 0.00 2.24
69 70 4.024302 GCCACTAACAAACAGGTCAGTAAC 60.024 45.833 0.00 0.00 0.00 2.50
70 71 5.365619 CCACTAACAAACAGGTCAGTAACT 58.634 41.667 0.00 0.00 0.00 2.24
71 72 6.518493 CCACTAACAAACAGGTCAGTAACTA 58.482 40.000 0.00 0.00 0.00 2.24
72 73 6.987992 CCACTAACAAACAGGTCAGTAACTAA 59.012 38.462 0.00 0.00 0.00 2.24
73 74 7.660208 CCACTAACAAACAGGTCAGTAACTAAT 59.340 37.037 0.00 0.00 0.00 1.73
74 75 9.701098 CACTAACAAACAGGTCAGTAACTAATA 57.299 33.333 0.00 0.00 0.00 0.98
77 78 7.974482 ACAAACAGGTCAGTAACTAATAACC 57.026 36.000 0.00 0.00 0.00 2.85
78 79 7.511268 ACAAACAGGTCAGTAACTAATAACCA 58.489 34.615 0.00 0.00 0.00 3.67
79 80 8.161425 ACAAACAGGTCAGTAACTAATAACCAT 58.839 33.333 0.00 0.00 0.00 3.55
80 81 9.661563 CAAACAGGTCAGTAACTAATAACCATA 57.338 33.333 0.00 0.00 0.00 2.74
129 130 5.298777 ACCAGGTAGTAGTAGTAATGAAGCG 59.701 44.000 0.00 0.00 0.00 4.68
153 154 4.083003 GCATTAACACCGAAATGGACAGAA 60.083 41.667 0.00 0.00 42.00 3.02
193 194 3.615155 GAGCCCAGCATCTAAACTTTCT 58.385 45.455 0.00 0.00 0.00 2.52
194 195 4.013050 GAGCCCAGCATCTAAACTTTCTT 58.987 43.478 0.00 0.00 0.00 2.52
195 196 4.013050 AGCCCAGCATCTAAACTTTCTTC 58.987 43.478 0.00 0.00 0.00 2.87
244 245 2.813754 CAAACATTCCGCCAGAGAAAGA 59.186 45.455 0.00 0.00 0.00 2.52
255 256 4.156190 CGCCAGAGAAAGAGAGTTGTACTA 59.844 45.833 0.00 0.00 0.00 1.82
256 257 5.404096 GCCAGAGAAAGAGAGTTGTACTAC 58.596 45.833 0.00 0.00 0.00 2.73
257 258 5.047943 GCCAGAGAAAGAGAGTTGTACTACA 60.048 44.000 10.09 0.00 0.00 2.74
258 259 6.350612 GCCAGAGAAAGAGAGTTGTACTACAT 60.351 42.308 10.09 0.00 0.00 2.29
260 261 6.964370 CAGAGAAAGAGAGTTGTACTACATCG 59.036 42.308 10.09 0.00 0.00 3.84
262 263 7.065324 AGAGAAAGAGAGTTGTACTACATCGAG 59.935 40.741 10.09 0.00 0.00 4.04
264 265 6.671614 AAGAGAGTTGTACTACATCGAGAG 57.328 41.667 10.09 0.00 0.00 3.20
278 288 1.094073 CGAGAGGAGGCCATGCTTTG 61.094 60.000 5.01 0.00 0.00 2.77
327 337 4.866327 AGAGTTCAGTAGTACTAGGCCT 57.134 45.455 11.78 11.78 0.00 5.19
372 389 2.325082 CCAAACGCACCCTTCCGAG 61.325 63.158 0.00 0.00 0.00 4.63
390 407 2.745884 TTTGCGCGTCCTCCCATG 60.746 61.111 8.43 0.00 0.00 3.66
489 510 3.741476 GCAACCGAGCCAGCCAAG 61.741 66.667 0.00 0.00 0.00 3.61
507 873 4.069232 GCAAGGGCCCCGAAAAGC 62.069 66.667 21.43 10.17 0.00 3.51
508 874 2.283173 CAAGGGCCCCGAAAAGCT 60.283 61.111 21.43 0.00 0.00 3.74
509 875 1.001393 CAAGGGCCCCGAAAAGCTA 60.001 57.895 21.43 0.00 0.00 3.32
510 876 1.032114 CAAGGGCCCCGAAAAGCTAG 61.032 60.000 21.43 0.00 0.00 3.42
511 877 2.829003 GGGCCCCGAAAAGCTAGC 60.829 66.667 12.23 6.62 0.00 3.42
512 878 2.045340 GGCCCCGAAAAGCTAGCA 60.045 61.111 18.83 0.00 0.00 3.49
513 879 2.407428 GGCCCCGAAAAGCTAGCAC 61.407 63.158 18.83 4.42 0.00 4.40
514 880 1.377333 GCCCCGAAAAGCTAGCACT 60.377 57.895 18.83 0.00 0.00 4.40
515 881 1.648467 GCCCCGAAAAGCTAGCACTG 61.648 60.000 18.83 1.45 0.00 3.66
516 882 0.036388 CCCCGAAAAGCTAGCACTGA 60.036 55.000 18.83 0.00 0.00 3.41
517 883 1.610624 CCCCGAAAAGCTAGCACTGAA 60.611 52.381 18.83 0.00 0.00 3.02
518 884 2.359900 CCCGAAAAGCTAGCACTGAAT 58.640 47.619 18.83 0.00 0.00 2.57
519 885 2.096496 CCCGAAAAGCTAGCACTGAATG 59.904 50.000 18.83 0.00 0.00 2.67
560 926 1.534595 CTGAGCTGAGCTTTTCACCAC 59.465 52.381 9.00 0.00 39.88 4.16
561 927 0.877743 GAGCTGAGCTTTTCACCACC 59.122 55.000 9.00 0.00 39.88 4.61
562 928 0.538287 AGCTGAGCTTTTCACCACCC 60.538 55.000 0.00 0.00 33.89 4.61
563 929 1.527433 GCTGAGCTTTTCACCACCCC 61.527 60.000 0.00 0.00 0.00 4.95
564 930 0.178992 CTGAGCTTTTCACCACCCCA 60.179 55.000 0.00 0.00 0.00 4.96
565 931 0.467290 TGAGCTTTTCACCACCCCAC 60.467 55.000 0.00 0.00 0.00 4.61
566 932 1.152546 AGCTTTTCACCACCCCACC 60.153 57.895 0.00 0.00 0.00 4.61
567 933 1.456705 GCTTTTCACCACCCCACCA 60.457 57.895 0.00 0.00 0.00 4.17
568 934 1.744320 GCTTTTCACCACCCCACCAC 61.744 60.000 0.00 0.00 0.00 4.16
591 957 2.154798 CTTCCGAGCTCCACCGTCAA 62.155 60.000 8.47 0.00 0.00 3.18
620 992 4.464947 CCACACCTTTTTCTTCTTCCTCT 58.535 43.478 0.00 0.00 0.00 3.69
639 1018 2.588314 GCAGGCAGCATCCGAGAG 60.588 66.667 0.00 0.00 44.79 3.20
640 1019 3.086391 GCAGGCAGCATCCGAGAGA 62.086 63.158 0.00 0.00 44.79 3.10
641 1020 1.067749 CAGGCAGCATCCGAGAGAG 59.932 63.158 0.00 0.00 0.00 3.20
642 1021 1.076412 AGGCAGCATCCGAGAGAGA 60.076 57.895 0.00 0.00 0.00 3.10
643 1022 1.108727 AGGCAGCATCCGAGAGAGAG 61.109 60.000 0.00 0.00 0.00 3.20
644 1023 1.106351 GGCAGCATCCGAGAGAGAGA 61.106 60.000 0.00 0.00 0.00 3.10
646 1025 1.965935 CAGCATCCGAGAGAGAGAGA 58.034 55.000 0.00 0.00 0.00 3.10
647 1026 1.603802 CAGCATCCGAGAGAGAGAGAC 59.396 57.143 0.00 0.00 0.00 3.36
648 1027 1.211703 AGCATCCGAGAGAGAGAGACA 59.788 52.381 0.00 0.00 0.00 3.41
649 1028 1.603802 GCATCCGAGAGAGAGAGACAG 59.396 57.143 0.00 0.00 0.00 3.51
650 1029 2.744823 GCATCCGAGAGAGAGAGACAGA 60.745 54.545 0.00 0.00 0.00 3.41
651 1030 2.979814 TCCGAGAGAGAGAGACAGAG 57.020 55.000 0.00 0.00 0.00 3.35
652 1031 2.462723 TCCGAGAGAGAGAGACAGAGA 58.537 52.381 0.00 0.00 0.00 3.10
653 1032 2.430694 TCCGAGAGAGAGAGACAGAGAG 59.569 54.545 0.00 0.00 0.00 3.20
654 1033 2.430694 CCGAGAGAGAGAGACAGAGAGA 59.569 54.545 0.00 0.00 0.00 3.10
655 1034 3.070159 CCGAGAGAGAGAGACAGAGAGAT 59.930 52.174 0.00 0.00 0.00 2.75
656 1035 4.053983 CGAGAGAGAGAGACAGAGAGATG 58.946 52.174 0.00 0.00 0.00 2.90
657 1036 3.812053 GAGAGAGAGAGACAGAGAGATGC 59.188 52.174 0.00 0.00 0.00 3.91
658 1037 3.457380 AGAGAGAGAGACAGAGAGATGCT 59.543 47.826 0.00 0.00 0.00 3.79
677 1056 0.183014 TTTGCCTCCCAACCGTAACA 59.817 50.000 0.00 0.00 31.97 2.41
678 1057 0.183014 TTGCCTCCCAACCGTAACAA 59.817 50.000 0.00 0.00 0.00 2.83
679 1058 0.535553 TGCCTCCCAACCGTAACAAC 60.536 55.000 0.00 0.00 0.00 3.32
722 1101 3.181537 CGCGTTTACACTAAACCAGCTAC 60.182 47.826 0.00 0.00 43.85 3.58
723 1102 3.742369 GCGTTTACACTAAACCAGCTACA 59.258 43.478 0.00 0.00 43.85 2.74
724 1103 4.143179 GCGTTTACACTAAACCAGCTACAG 60.143 45.833 0.00 0.00 43.85 2.74
725 1104 4.986659 CGTTTACACTAAACCAGCTACAGT 59.013 41.667 0.00 0.00 43.85 3.55
726 1105 6.151691 CGTTTACACTAAACCAGCTACAGTA 58.848 40.000 0.00 0.00 43.85 2.74
727 1106 6.307318 CGTTTACACTAAACCAGCTACAGTAG 59.693 42.308 2.85 2.85 43.85 2.57
755 1134 2.881074 AGTAACACTAGCACATCGCAG 58.119 47.619 0.00 0.00 46.13 5.18
784 1163 4.537433 ATCTCCGGAAGCGGCTGC 62.537 66.667 10.33 10.33 43.24 5.25
808 1187 6.239036 GCCTGCCTTTTCTTTCTTTCTTTCTA 60.239 38.462 0.00 0.00 0.00 2.10
841 1232 3.378602 CATTGCCAGCCAGCTGCA 61.379 61.111 14.26 12.47 44.83 4.41
856 1247 3.730761 GCACTTGCACTCGGCCAG 61.731 66.667 2.24 1.58 43.89 4.85
857 1248 3.730761 CACTTGCACTCGGCCAGC 61.731 66.667 2.24 0.87 43.89 4.85
877 1276 0.318445 CCCCTCCGCGTATAAGTTCG 60.318 60.000 4.92 0.00 0.00 3.95
880 1279 2.533266 CCTCCGCGTATAAGTTCGTTT 58.467 47.619 4.92 0.00 0.00 3.60
1008 1420 2.988839 GCAGGGAGCCATGGGTTCT 61.989 63.158 21.57 16.80 37.23 3.01
1047 1459 4.778143 CTCGGGTTCTTGGCGGGG 62.778 72.222 0.00 0.00 0.00 5.73
1049 1461 4.109675 CGGGTTCTTGGCGGGGAT 62.110 66.667 0.00 0.00 0.00 3.85
1050 1462 2.737881 CGGGTTCTTGGCGGGGATA 61.738 63.158 0.00 0.00 0.00 2.59
1161 1573 2.284625 ACCCTCATCCAGTCCGCA 60.285 61.111 0.00 0.00 0.00 5.69
1183 1595 2.271173 CCAAGGGAGCCGGTAACC 59.729 66.667 1.90 2.37 0.00 2.85
1196 1608 3.905968 CCGGTAACCAATTAAATCCCCT 58.094 45.455 0.00 0.00 0.00 4.79
1197 1609 3.887110 CCGGTAACCAATTAAATCCCCTC 59.113 47.826 0.00 0.00 0.00 4.30
1215 1627 2.310052 CCTCCTCCCAGAATTGTTCCTT 59.690 50.000 0.00 0.00 0.00 3.36
1221 1633 2.028748 CCCAGAATTGTTCCTTTGCCTG 60.029 50.000 0.00 0.00 0.00 4.85
1265 1712 8.856490 TTTTCTTCTTGTTGCAAAGATTAGTC 57.144 30.769 0.00 0.00 36.12 2.59
1282 1729 5.811399 TTAGTCTTTTATTGGCCATGTCG 57.189 39.130 6.09 0.00 0.00 4.35
1283 1730 3.686016 AGTCTTTTATTGGCCATGTCGT 58.314 40.909 6.09 0.00 0.00 4.34
1284 1731 4.079253 AGTCTTTTATTGGCCATGTCGTT 58.921 39.130 6.09 0.00 0.00 3.85
1285 1732 4.082787 AGTCTTTTATTGGCCATGTCGTTG 60.083 41.667 6.09 0.00 0.00 4.10
1286 1733 4.075682 TCTTTTATTGGCCATGTCGTTGA 58.924 39.130 6.09 0.00 0.00 3.18
1287 1734 4.155826 TCTTTTATTGGCCATGTCGTTGAG 59.844 41.667 6.09 0.00 0.00 3.02
1288 1735 3.342377 TTATTGGCCATGTCGTTGAGA 57.658 42.857 6.09 0.00 0.00 3.27
1291 1738 0.324614 TGGCCATGTCGTTGAGATGT 59.675 50.000 0.00 0.00 32.41 3.06
1333 1806 2.997897 ACCCTGGTCGGTCAGAGC 60.998 66.667 7.36 0.00 46.92 4.09
1349 1822 6.218746 GGTCAGAGCAACAATTTTTCTGATT 58.781 36.000 5.87 0.00 44.11 2.57
1350 1823 6.364435 GGTCAGAGCAACAATTTTTCTGATTC 59.636 38.462 5.87 0.00 44.11 2.52
1351 1824 6.364435 GTCAGAGCAACAATTTTTCTGATTCC 59.636 38.462 5.87 0.00 44.11 3.01
1417 1910 3.031736 TCAGTATCCACTTAGGTGCTCC 58.968 50.000 0.00 0.00 41.75 4.70
1453 1946 5.282055 TCATGCAGTCTTATCCTTGTAGG 57.718 43.478 0.00 0.00 36.46 3.18
1535 2040 0.821301 GGATCTAGCCTTGCCTTGCC 60.821 60.000 0.00 0.00 0.00 4.52
1536 2041 0.182299 GATCTAGCCTTGCCTTGCCT 59.818 55.000 0.00 0.00 0.00 4.75
1537 2042 0.627986 ATCTAGCCTTGCCTTGCCTT 59.372 50.000 0.00 0.00 0.00 4.35
1538 2043 0.322816 TCTAGCCTTGCCTTGCCTTG 60.323 55.000 0.00 0.00 0.00 3.61
1539 2044 1.941999 CTAGCCTTGCCTTGCCTTGC 61.942 60.000 0.00 0.00 0.00 4.01
1556 2061 1.683365 GCTGGTGGTGCCCATGATT 60.683 57.895 0.00 0.00 35.28 2.57
1733 2239 6.551385 TTGCTCAAGATTTGAAGTCTTCTC 57.449 37.500 13.67 3.49 39.58 2.87
1757 2263 0.445436 CGGTGCTGAACTGCTGATTC 59.555 55.000 0.00 0.00 0.00 2.52
1760 2266 2.159421 GGTGCTGAACTGCTGATTCATG 60.159 50.000 0.00 0.00 35.57 3.07
1773 2279 4.855388 GCTGATTCATGAATGTGTGTTGTC 59.145 41.667 25.37 9.09 0.00 3.18
1782 2288 9.447157 TCATGAATGTGTGTTGTCATAATTCTA 57.553 29.630 0.00 0.00 0.00 2.10
1814 2321 9.569167 GTAAAATTAACCAAATAAGACTCTGGC 57.431 33.333 0.00 0.00 31.74 4.85
1878 2385 7.821846 TGTTGAAATATTTTGTAATTCAGGGGC 59.178 33.333 1.43 0.00 32.21 5.80
2067 2577 6.440647 TGTCAATCTGGAGGTGAGTAATACTT 59.559 38.462 0.00 0.00 0.00 2.24
2071 2581 4.710375 TCTGGAGGTGAGTAATACTTCACC 59.290 45.833 22.81 22.81 41.99 4.02
2109 2619 4.870426 GGACTGAGCGATAAGTTTGAATCA 59.130 41.667 0.00 0.00 0.00 2.57
2143 2653 2.062971 AATGCCTTAGCTGATGGTGG 57.937 50.000 0.00 0.00 40.80 4.61
2325 2835 3.596214 TCAATTAGCTGTCCCGAACTTC 58.404 45.455 0.00 0.00 0.00 3.01
2330 2840 2.457598 AGCTGTCCCGAACTTCTCATA 58.542 47.619 0.00 0.00 0.00 2.15
2338 2850 6.604396 TGTCCCGAACTTCTCATATGTAGTTA 59.396 38.462 15.49 3.90 31.41 2.24
2412 2924 4.616835 GCCTCTGTTGCTATTTCTGTTTGG 60.617 45.833 0.00 0.00 0.00 3.28
2576 3118 7.915397 CAGTTCCCAAATAAATATGTACACTGC 59.085 37.037 0.00 0.00 0.00 4.40
2597 3139 9.577110 CACTGCTTATTGAATCACATTACAATT 57.423 29.630 0.00 0.00 35.19 2.32
2736 3278 1.202302 GCTTCAGGCCTTTATTTCCGC 60.202 52.381 0.00 0.00 34.27 5.54
2772 3314 2.288457 GCAGGCTGCTATCGATGACTTA 60.288 50.000 31.37 0.00 40.96 2.24
2826 3368 7.285401 CAGGTATTGGTGCTTCCATAGTTAAAT 59.715 37.037 2.36 0.00 46.60 1.40
2830 3373 7.716799 TTGGTGCTTCCATAGTTAAATCATT 57.283 32.000 2.36 0.00 46.60 2.57
2874 3417 7.981225 GGCAAATCATTTATGTTTACCTGATGT 59.019 33.333 0.00 0.00 0.00 3.06
3114 3657 4.837972 GAAGAGCACTTCTATTTCCAGGT 58.162 43.478 15.68 0.00 46.19 4.00
3230 3773 5.622914 GCATTGTGAGATTGCAGGTATTTGT 60.623 40.000 0.00 0.00 36.40 2.83
3283 3827 6.414732 TCATGATAACCCTTTCTTGGTACTG 58.585 40.000 0.00 0.00 34.15 2.74
3324 3872 5.808030 GCACTGGTTCTGACTTATCTTAGAC 59.192 44.000 0.00 0.00 0.00 2.59
3329 3877 9.743057 CTGGTTCTGACTTATCTTAGACTATTG 57.257 37.037 0.00 0.00 0.00 1.90
3340 3888 5.109210 TCTTAGACTATTGATGTGCCAACG 58.891 41.667 0.00 0.00 0.00 4.10
3357 3905 7.094592 TGTGCCAACGACAATATCTTCATTTTA 60.095 33.333 0.00 0.00 0.00 1.52
3389 3943 9.644993 GTTGTTAAAATTCACAAAAATACAGGC 57.355 29.630 0.00 0.00 34.70 4.85
3471 4025 8.207545 AGAAGACAACCATCCAGAAATATCTAC 58.792 37.037 0.00 0.00 33.50 2.59
3510 4065 7.649705 TGTGACATATTTTATGTTTGCAAACGT 59.350 29.630 33.01 33.01 41.74 3.99
3620 4175 1.174078 TGATGTGTGGCAGGTGCTTG 61.174 55.000 1.26 0.00 41.70 4.01
3663 4218 9.778741 TGTGATTTAAGAGATACAAAACTGAGT 57.221 29.630 0.00 0.00 0.00 3.41
3703 4259 8.696410 TTCAGTGAAACCAATTTTTCTTGTAC 57.304 30.769 2.20 0.00 37.80 2.90
3865 4424 4.161565 TCTGAGCCGTAACCTTCAACATAT 59.838 41.667 0.00 0.00 0.00 1.78
3884 4443 7.313740 ACATATGAGTAGATTGGCTGATCTT 57.686 36.000 10.38 0.00 37.54 2.40
3887 4446 4.293494 TGAGTAGATTGGCTGATCTTCCT 58.707 43.478 8.79 6.28 37.54 3.36
3888 4447 5.458595 TGAGTAGATTGGCTGATCTTCCTA 58.541 41.667 8.79 0.00 37.54 2.94
3889 4448 6.080682 TGAGTAGATTGGCTGATCTTCCTAT 58.919 40.000 8.79 0.00 37.54 2.57
3890 4449 6.014755 TGAGTAGATTGGCTGATCTTCCTATG 60.015 42.308 8.79 0.00 37.54 2.23
3945 4504 0.250338 ACGCTGTGAAGGGTTTCTCC 60.250 55.000 0.00 0.00 34.31 3.71
3966 4525 1.279025 GGTCAGGGCAGAATGGGGTA 61.279 60.000 0.00 0.00 35.86 3.69
3969 4528 1.494721 TCAGGGCAGAATGGGGTATTC 59.505 52.381 0.00 0.00 44.52 1.75
3987 4546 3.519908 TTCATCAACTCTTGTTTCGCG 57.480 42.857 0.00 0.00 33.52 5.87
4032 4591 1.204941 ACATGGTACTCGAGCAACTCC 59.795 52.381 13.61 8.50 39.49 3.85
4063 4622 2.607771 GGCAACAAGGTATGCACACAAG 60.608 50.000 0.00 0.00 44.32 3.16
4066 4625 2.504367 ACAAGGTATGCACACAAGGAC 58.496 47.619 0.00 0.00 0.00 3.85
4068 4627 3.084039 CAAGGTATGCACACAAGGACAT 58.916 45.455 0.00 0.00 0.00 3.06
4073 4632 1.109609 TGCACACAAGGACATGCAAA 58.890 45.000 0.00 0.00 44.72 3.68
4075 4634 2.288334 TGCACACAAGGACATGCAAATC 60.288 45.455 0.00 0.00 44.72 2.17
4078 4637 3.005050 CACACAAGGACATGCAAATCTGT 59.995 43.478 0.00 0.00 0.00 3.41
4079 4638 3.638160 ACACAAGGACATGCAAATCTGTT 59.362 39.130 0.00 0.00 0.00 3.16
4121 4681 0.457851 CACTCCCGGTCTCAGATCAC 59.542 60.000 0.00 0.00 0.00 3.06
4123 4683 1.028905 CTCCCGGTCTCAGATCACTC 58.971 60.000 0.00 0.00 0.00 3.51
4135 4695 2.934553 CAGATCACTCGATGCACACAAT 59.065 45.455 0.00 0.00 29.66 2.71
4142 4702 1.926510 TCGATGCACACAATGACGATC 59.073 47.619 0.00 0.00 0.00 3.69
4156 4718 2.138320 GACGATCGATGAACATGCCAT 58.862 47.619 24.34 0.00 0.00 4.40
4164 4726 7.360353 CGATCGATGAACATGCCATACTATTTT 60.360 37.037 10.26 0.00 0.00 1.82
4166 4728 8.669946 TCGATGAACATGCCATACTATTTTTA 57.330 30.769 0.00 0.00 0.00 1.52
4167 4729 9.114952 TCGATGAACATGCCATACTATTTTTAA 57.885 29.630 0.00 0.00 0.00 1.52
4191 4753 7.426929 ACTTCTCAATAACATGTCAAGTCAC 57.573 36.000 0.00 0.00 0.00 3.67
4195 4757 4.455533 TCAATAACATGTCAAGTCACCTGC 59.544 41.667 0.00 0.00 0.00 4.85
4197 4759 2.645838 ACATGTCAAGTCACCTGCTT 57.354 45.000 0.00 0.00 0.00 3.91
4199 4761 1.538512 CATGTCAAGTCACCTGCTTGG 59.461 52.381 5.39 0.00 42.44 3.61
4217 4779 3.350219 TGGTTAGCCTCTGATGAAACC 57.650 47.619 0.00 9.27 37.48 3.27
4227 4789 4.163839 CCTCTGATGAAACCTCCTCTCATT 59.836 45.833 0.00 0.00 29.97 2.57
4233 4795 6.432162 TGATGAAACCTCCTCTCATTCTTTTG 59.568 38.462 0.00 0.00 29.97 2.44
4498 5079 6.745857 TGAGATAAGATATGATAGGGCAGGA 58.254 40.000 0.00 0.00 0.00 3.86
4506 5087 2.370647 GATAGGGCAGGACCTCGCAC 62.371 65.000 15.09 12.43 42.09 5.34
4516 5097 4.724697 CCTCGCACGCAAACGCAG 62.725 66.667 0.00 0.00 45.53 5.18
4546 5127 5.313623 CCTCTGCGTTATTTTAGTTTCACG 58.686 41.667 0.00 0.00 0.00 4.35
4588 5170 2.736721 GCCAATTGCTATTCGCTCGATA 59.263 45.455 0.00 0.00 40.11 2.92
4597 5179 6.258899 TGCTATTCGCTCGATATATCTGAAC 58.741 40.000 10.93 4.96 40.11 3.18
4687 5269 6.974932 ATAATGTGCTTAGTTCAGAGTGTG 57.025 37.500 0.00 0.00 0.00 3.82
4696 5278 0.687354 TTCAGAGTGTGCTCCCTTCC 59.313 55.000 0.00 0.00 42.59 3.46
4714 5296 4.398358 CCTTCCAGTCTAGTCATGTTCGTA 59.602 45.833 0.00 0.00 0.00 3.43
4758 5340 2.754552 TGAACTGCTGAAAACTGCAACT 59.245 40.909 0.00 0.00 0.00 3.16
4760 5342 2.368439 ACTGCTGAAAACTGCAACTGA 58.632 42.857 0.00 0.00 0.00 3.41
4912 5508 8.319143 TGGAGTAACAGCTCAACTAAATAAAC 57.681 34.615 0.00 0.00 37.24 2.01
4913 5509 8.154856 TGGAGTAACAGCTCAACTAAATAAACT 58.845 33.333 0.00 0.00 37.24 2.66
4914 5510 9.649167 GGAGTAACAGCTCAACTAAATAAACTA 57.351 33.333 0.00 0.00 37.24 2.24
4925 5521 9.609346 TCAACTAAATAAACTAGTAGAATGCCC 57.391 33.333 3.59 0.00 0.00 5.36
4926 5522 8.548721 CAACTAAATAAACTAGTAGAATGCCCG 58.451 37.037 3.59 0.00 0.00 6.13
4927 5523 7.789026 ACTAAATAAACTAGTAGAATGCCCGT 58.211 34.615 3.59 0.00 0.00 5.28
4928 5524 6.920569 AAATAAACTAGTAGAATGCCCGTG 57.079 37.500 3.59 0.00 0.00 4.94
4929 5525 2.311124 AACTAGTAGAATGCCCGTGC 57.689 50.000 3.59 0.00 38.26 5.34
4930 5526 0.102481 ACTAGTAGAATGCCCGTGCG 59.898 55.000 3.59 0.00 41.78 5.34
4931 5527 0.102481 CTAGTAGAATGCCCGTGCGT 59.898 55.000 0.00 0.00 41.78 5.24
4933 5529 1.019278 AGTAGAATGCCCGTGCGTTG 61.019 55.000 0.86 0.00 46.55 4.10
4934 5530 2.395360 TAGAATGCCCGTGCGTTGC 61.395 57.895 0.86 0.00 46.55 4.17
4935 5531 2.796483 TAGAATGCCCGTGCGTTGCT 62.796 55.000 0.86 2.45 46.55 3.91
4936 5532 2.359354 AATGCCCGTGCGTTGCTA 60.359 55.556 0.00 0.00 44.90 3.49
4937 5533 2.577763 GAATGCCCGTGCGTTGCTAC 62.578 60.000 0.86 0.00 46.55 3.58
4946 5542 2.867472 CGTTGCTACGGGCCTTTG 59.133 61.111 13.04 0.00 43.94 2.77
4947 5543 1.669760 CGTTGCTACGGGCCTTTGA 60.670 57.895 13.04 0.00 43.94 2.69
4948 5544 1.635663 CGTTGCTACGGGCCTTTGAG 61.636 60.000 13.04 0.00 43.94 3.02
4949 5545 1.002624 TTGCTACGGGCCTTTGAGG 60.003 57.895 0.84 0.00 40.92 3.86
4959 5555 2.967270 CCTTTGAGGCCTCCTTTGG 58.033 57.895 29.95 20.87 31.76 3.28
4960 5556 0.113190 CCTTTGAGGCCTCCTTTGGT 59.887 55.000 29.95 0.00 31.76 3.67
4961 5557 1.481242 CCTTTGAGGCCTCCTTTGGTT 60.481 52.381 29.95 0.00 31.76 3.67
4962 5558 1.889170 CTTTGAGGCCTCCTTTGGTTC 59.111 52.381 29.95 2.80 31.76 3.62
4963 5559 0.250727 TTGAGGCCTCCTTTGGTTCG 60.251 55.000 29.95 0.00 31.76 3.95
4964 5560 1.377333 GAGGCCTCCTTTGGTTCGG 60.377 63.158 23.19 0.00 31.76 4.30
4965 5561 1.838073 GAGGCCTCCTTTGGTTCGGA 61.838 60.000 23.19 0.00 31.76 4.55
4966 5562 1.377333 GGCCTCCTTTGGTTCGGAG 60.377 63.158 0.00 0.00 45.10 4.63
4977 5573 8.276252 TCCTTTGGTTCGGAGAAAATTTATAG 57.724 34.615 0.00 0.00 45.90 1.31
4978 5574 7.338449 TCCTTTGGTTCGGAGAAAATTTATAGG 59.662 37.037 0.00 0.00 45.90 2.57
4979 5575 7.338449 CCTTTGGTTCGGAGAAAATTTATAGGA 59.662 37.037 0.00 0.00 45.90 2.94
4980 5576 8.638629 TTTGGTTCGGAGAAAATTTATAGGAA 57.361 30.769 0.00 0.00 45.90 3.36
4981 5577 8.817092 TTGGTTCGGAGAAAATTTATAGGAAT 57.183 30.769 0.00 0.00 45.90 3.01
4982 5578 8.817092 TGGTTCGGAGAAAATTTATAGGAATT 57.183 30.769 0.00 0.00 45.90 2.17
4983 5579 8.899771 TGGTTCGGAGAAAATTTATAGGAATTC 58.100 33.333 0.00 0.00 45.90 2.17
4984 5580 9.121658 GGTTCGGAGAAAATTTATAGGAATTCT 57.878 33.333 5.23 0.00 45.90 2.40
5036 5632 9.816787 ATATTAAAAGTCCTTTGGTTTGTAGGA 57.183 29.630 0.00 0.00 35.75 2.94
5037 5633 7.957992 TTAAAAGTCCTTTGGTTTGTAGGAA 57.042 32.000 0.00 0.00 39.65 3.36
5038 5634 8.541899 TTAAAAGTCCTTTGGTTTGTAGGAAT 57.458 30.769 0.00 0.00 39.65 3.01
5039 5635 9.643735 TTAAAAGTCCTTTGGTTTGTAGGAATA 57.356 29.630 0.00 0.00 39.65 1.75
5040 5636 7.761038 AAAGTCCTTTGGTTTGTAGGAATAG 57.239 36.000 0.00 0.00 39.65 1.73
5041 5637 6.697641 AGTCCTTTGGTTTGTAGGAATAGA 57.302 37.500 0.00 0.00 39.65 1.98
5042 5638 7.272144 AGTCCTTTGGTTTGTAGGAATAGAT 57.728 36.000 0.00 0.00 39.65 1.98
5043 5639 7.699878 AGTCCTTTGGTTTGTAGGAATAGATT 58.300 34.615 0.00 0.00 39.65 2.40
5044 5640 7.829706 AGTCCTTTGGTTTGTAGGAATAGATTC 59.170 37.037 0.00 0.00 39.65 2.52
5045 5641 7.610305 GTCCTTTGGTTTGTAGGAATAGATTCA 59.390 37.037 4.71 0.00 39.65 2.57
5046 5642 8.336235 TCCTTTGGTTTGTAGGAATAGATTCAT 58.664 33.333 4.71 0.00 38.53 2.57
5047 5643 9.627123 CCTTTGGTTTGTAGGAATAGATTCATA 57.373 33.333 4.71 0.00 38.53 2.15
5074 5670 8.980481 TCCTATGGACAAAATTCTTCTTATCC 57.020 34.615 0.00 0.00 0.00 2.59
5075 5671 8.781951 TCCTATGGACAAAATTCTTCTTATCCT 58.218 33.333 0.00 0.00 0.00 3.24
5076 5672 9.413734 CCTATGGACAAAATTCTTCTTATCCTT 57.586 33.333 0.00 0.00 0.00 3.36
5078 5674 8.884124 ATGGACAAAATTCTTCTTATCCTTCA 57.116 30.769 0.00 0.00 0.00 3.02
5079 5675 8.110860 TGGACAAAATTCTTCTTATCCTTCAC 57.889 34.615 0.00 0.00 0.00 3.18
5080 5676 7.723616 TGGACAAAATTCTTCTTATCCTTCACA 59.276 33.333 0.00 0.00 0.00 3.58
5081 5677 8.743714 GGACAAAATTCTTCTTATCCTTCACAT 58.256 33.333 0.00 0.00 0.00 3.21
5121 5717 9.729281 AATATTAACCTAGACTCAACGGAAAAA 57.271 29.630 0.00 0.00 0.00 1.94
5146 5742 8.843308 AAAATCCAAGGATATGAATGAAAGGA 57.157 30.769 1.29 0.00 33.97 3.36
5147 5743 7.830099 AATCCAAGGATATGAATGAAAGGAC 57.170 36.000 1.29 0.00 33.97 3.85
5148 5744 6.325993 TCCAAGGATATGAATGAAAGGACA 57.674 37.500 0.00 0.00 0.00 4.02
5149 5745 6.914665 TCCAAGGATATGAATGAAAGGACAT 58.085 36.000 0.00 0.00 0.00 3.06
5150 5746 7.000472 TCCAAGGATATGAATGAAAGGACATC 59.000 38.462 0.00 0.00 0.00 3.06
5151 5747 7.002879 CCAAGGATATGAATGAAAGGACATCT 58.997 38.462 0.00 0.00 0.00 2.90
5152 5748 7.174599 CCAAGGATATGAATGAAAGGACATCTC 59.825 40.741 0.00 0.00 0.00 2.75
5153 5749 7.630005 AGGATATGAATGAAAGGACATCTCT 57.370 36.000 0.00 0.00 0.00 3.10
5154 5750 8.043429 AGGATATGAATGAAAGGACATCTCTT 57.957 34.615 0.00 0.00 0.00 2.85
5155 5751 8.501070 AGGATATGAATGAAAGGACATCTCTTT 58.499 33.333 0.00 0.00 37.18 2.52
5156 5752 9.129532 GGATATGAATGAAAGGACATCTCTTTT 57.870 33.333 0.00 0.00 34.92 2.27
5158 5754 6.824305 TGAATGAAAGGACATCTCTTTTCC 57.176 37.500 3.68 0.00 40.27 3.13
5159 5755 6.546484 TGAATGAAAGGACATCTCTTTTCCT 58.454 36.000 3.68 0.00 40.27 3.36
5160 5756 7.689299 TGAATGAAAGGACATCTCTTTTCCTA 58.311 34.615 3.68 0.00 40.27 2.94
5161 5757 8.331740 TGAATGAAAGGACATCTCTTTTCCTAT 58.668 33.333 3.68 0.00 40.27 2.57
5162 5758 9.183368 GAATGAAAGGACATCTCTTTTCCTATT 57.817 33.333 3.68 0.00 40.27 1.73
5164 5760 9.620259 ATGAAAGGACATCTCTTTTCCTATTAC 57.380 33.333 3.68 0.00 40.27 1.89
5165 5761 8.826765 TGAAAGGACATCTCTTTTCCTATTACT 58.173 33.333 3.68 0.00 40.27 2.24
5204 5800 8.755696 GAGATACATGACATCTCATTTCCTAC 57.244 38.462 24.65 6.56 45.17 3.18
5205 5801 8.255111 AGATACATGACATCTCATTTCCTACA 57.745 34.615 0.00 0.00 34.65 2.74
5206 5802 8.708378 AGATACATGACATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 34.65 2.41
5207 5803 8.899427 ATACATGACATCTCATTTCCTACAAG 57.101 34.615 0.00 0.00 34.65 3.16
5208 5804 6.715280 ACATGACATCTCATTTCCTACAAGT 58.285 36.000 0.00 0.00 34.65 3.16
5209 5805 7.170965 ACATGACATCTCATTTCCTACAAGTT 58.829 34.615 0.00 0.00 34.65 2.66
5210 5806 7.667219 ACATGACATCTCATTTCCTACAAGTTT 59.333 33.333 0.00 0.00 34.65 2.66
5211 5807 8.517878 CATGACATCTCATTTCCTACAAGTTTT 58.482 33.333 0.00 0.00 34.65 2.43
5212 5808 9.739276 ATGACATCTCATTTCCTACAAGTTTTA 57.261 29.630 0.00 0.00 32.79 1.52
5213 5809 9.739276 TGACATCTCATTTCCTACAAGTTTTAT 57.261 29.630 0.00 0.00 0.00 1.40
5249 5845 6.796785 ATTCCATTCCTACAAATCAAAGGG 57.203 37.500 0.00 0.00 0.00 3.95
5250 5846 4.609301 TCCATTCCTACAAATCAAAGGGG 58.391 43.478 0.00 0.00 0.00 4.79
5251 5847 3.706086 CCATTCCTACAAATCAAAGGGGG 59.294 47.826 0.00 0.00 0.00 5.40
5252 5848 2.525105 TCCTACAAATCAAAGGGGGC 57.475 50.000 0.00 0.00 0.00 5.80
5253 5849 2.000048 TCCTACAAATCAAAGGGGGCT 59.000 47.619 0.00 0.00 0.00 5.19
5254 5850 2.381961 TCCTACAAATCAAAGGGGGCTT 59.618 45.455 0.00 0.00 0.00 4.35
5255 5851 3.173151 CCTACAAATCAAAGGGGGCTTT 58.827 45.455 0.00 0.00 0.00 3.51
5256 5852 3.055891 CCTACAAATCAAAGGGGGCTTTG 60.056 47.826 0.00 0.00 43.50 2.77
5257 5853 1.699083 ACAAATCAAAGGGGGCTTTGG 59.301 47.619 0.00 0.00 42.68 3.28
5258 5854 0.692476 AAATCAAAGGGGGCTTTGGC 59.308 50.000 0.00 0.00 42.68 4.52
5271 5867 2.564771 GCTTTGGCCTTTTCTTTTGCT 58.435 42.857 3.32 0.00 0.00 3.91
5272 5868 2.945008 GCTTTGGCCTTTTCTTTTGCTT 59.055 40.909 3.32 0.00 0.00 3.91
5273 5869 3.242837 GCTTTGGCCTTTTCTTTTGCTTG 60.243 43.478 3.32 0.00 0.00 4.01
5274 5870 1.952193 TGGCCTTTTCTTTTGCTTGC 58.048 45.000 3.32 0.00 0.00 4.01
5275 5871 1.209019 TGGCCTTTTCTTTTGCTTGCA 59.791 42.857 3.32 0.00 0.00 4.08
5276 5872 2.158784 TGGCCTTTTCTTTTGCTTGCAT 60.159 40.909 3.32 0.00 0.00 3.96
5277 5873 3.070734 TGGCCTTTTCTTTTGCTTGCATA 59.929 39.130 3.32 0.00 0.00 3.14
5278 5874 4.256110 GGCCTTTTCTTTTGCTTGCATAT 58.744 39.130 0.00 0.00 0.00 1.78
5279 5875 4.696877 GGCCTTTTCTTTTGCTTGCATATT 59.303 37.500 0.00 0.00 0.00 1.28
5280 5876 5.163824 GGCCTTTTCTTTTGCTTGCATATTC 60.164 40.000 0.00 0.00 0.00 1.75
5281 5877 5.409214 GCCTTTTCTTTTGCTTGCATATTCA 59.591 36.000 0.00 0.00 0.00 2.57
5282 5878 6.073112 GCCTTTTCTTTTGCTTGCATATTCAA 60.073 34.615 0.00 0.00 0.00 2.69
5283 5879 7.361457 GCCTTTTCTTTTGCTTGCATATTCAAT 60.361 33.333 0.00 0.00 0.00 2.57
5284 5880 9.153721 CCTTTTCTTTTGCTTGCATATTCAATA 57.846 29.630 0.00 0.00 0.00 1.90
5288 5884 9.656040 TTCTTTTGCTTGCATATTCAATATTGT 57.344 25.926 14.97 0.00 0.00 2.71
5289 5885 9.656040 TCTTTTGCTTGCATATTCAATATTGTT 57.344 25.926 14.97 7.05 0.00 2.83
5290 5886 9.697250 CTTTTGCTTGCATATTCAATATTGTTG 57.303 29.630 14.97 9.80 0.00 3.33
5291 5887 8.774890 TTTGCTTGCATATTCAATATTGTTGT 57.225 26.923 14.97 5.49 0.00 3.32
5292 5888 9.866798 TTTGCTTGCATATTCAATATTGTTGTA 57.133 25.926 14.97 7.34 0.00 2.41
5312 5908 8.963130 TGTTGTATAAAGCACAGAAAATTTTCG 58.037 29.630 21.98 18.73 41.92 3.46
5313 5909 8.424731 GTTGTATAAAGCACAGAAAATTTTCGG 58.575 33.333 23.92 23.92 41.92 4.30
5314 5910 6.584563 TGTATAAAGCACAGAAAATTTTCGGC 59.415 34.615 25.01 24.94 41.92 5.54
5315 5911 2.438868 AGCACAGAAAATTTTCGGCC 57.561 45.000 25.01 17.87 41.92 6.13
5316 5912 1.000843 AGCACAGAAAATTTTCGGCCC 59.999 47.619 25.01 17.59 41.92 5.80
5317 5913 1.939381 GCACAGAAAATTTTCGGCCCC 60.939 52.381 25.01 13.17 41.92 5.80
5318 5914 1.618343 CACAGAAAATTTTCGGCCCCT 59.382 47.619 25.01 8.16 41.92 4.79
5319 5915 2.037121 CACAGAAAATTTTCGGCCCCTT 59.963 45.455 25.01 7.84 41.92 3.95
5320 5916 2.299013 ACAGAAAATTTTCGGCCCCTTC 59.701 45.455 25.01 2.35 41.92 3.46
5321 5917 1.899814 AGAAAATTTTCGGCCCCTTCC 59.100 47.619 21.98 0.00 41.92 3.46
5322 5918 1.621317 GAAAATTTTCGGCCCCTTCCA 59.379 47.619 14.83 0.00 0.00 3.53
5323 5919 1.723288 AAATTTTCGGCCCCTTCCAA 58.277 45.000 0.00 0.00 0.00 3.53
5324 5920 1.723288 AATTTTCGGCCCCTTCCAAA 58.277 45.000 0.00 0.00 0.00 3.28
5325 5921 1.266178 ATTTTCGGCCCCTTCCAAAG 58.734 50.000 0.00 0.00 0.00 2.77
5326 5922 0.186386 TTTTCGGCCCCTTCCAAAGA 59.814 50.000 0.00 0.00 0.00 2.52
5327 5923 0.538746 TTTCGGCCCCTTCCAAAGAC 60.539 55.000 0.00 0.00 0.00 3.01
5328 5924 1.710996 TTCGGCCCCTTCCAAAGACA 61.711 55.000 0.00 0.00 0.00 3.41
5329 5925 1.000896 CGGCCCCTTCCAAAGACAT 60.001 57.895 0.00 0.00 0.00 3.06
5330 5926 0.611896 CGGCCCCTTCCAAAGACATT 60.612 55.000 0.00 0.00 0.00 2.71
5331 5927 0.897621 GGCCCCTTCCAAAGACATTG 59.102 55.000 0.00 0.00 38.84 2.82
5332 5928 0.247460 GCCCCTTCCAAAGACATTGC 59.753 55.000 0.00 0.00 37.73 3.56
5333 5929 0.897621 CCCCTTCCAAAGACATTGCC 59.102 55.000 0.00 0.00 37.73 4.52
5334 5930 1.550869 CCCCTTCCAAAGACATTGCCT 60.551 52.381 0.00 0.00 37.73 4.75
5335 5931 1.821136 CCCTTCCAAAGACATTGCCTC 59.179 52.381 0.00 0.00 37.73 4.70
5336 5932 1.470098 CCTTCCAAAGACATTGCCTCG 59.530 52.381 0.00 0.00 37.73 4.63
5337 5933 1.470098 CTTCCAAAGACATTGCCTCGG 59.530 52.381 0.00 0.00 37.73 4.63
5338 5934 0.322456 TCCAAAGACATTGCCTCGGG 60.322 55.000 0.00 0.00 37.73 5.14
5339 5935 0.322456 CCAAAGACATTGCCTCGGGA 60.322 55.000 0.00 0.00 37.73 5.14
5340 5936 0.804989 CAAAGACATTGCCTCGGGAC 59.195 55.000 0.00 0.00 31.00 4.46
5341 5937 0.322546 AAAGACATTGCCTCGGGACC 60.323 55.000 0.00 0.00 0.00 4.46
5342 5938 2.124695 GACATTGCCTCGGGACCC 60.125 66.667 0.00 0.00 0.00 4.46
5343 5939 2.610859 ACATTGCCTCGGGACCCT 60.611 61.111 9.41 0.00 0.00 4.34
5344 5940 2.198304 GACATTGCCTCGGGACCCTT 62.198 60.000 9.41 0.00 0.00 3.95
5345 5941 1.750399 CATTGCCTCGGGACCCTTG 60.750 63.158 9.41 0.48 0.00 3.61
5346 5942 3.645268 ATTGCCTCGGGACCCTTGC 62.645 63.158 9.41 8.83 0.00 4.01
5348 5944 4.115199 GCCTCGGGACCCTTGCAT 62.115 66.667 9.41 0.00 0.00 3.96
5349 5945 2.742116 GCCTCGGGACCCTTGCATA 61.742 63.158 9.41 0.00 0.00 3.14
5350 5946 2.056906 GCCTCGGGACCCTTGCATAT 62.057 60.000 9.41 0.00 0.00 1.78
5351 5947 0.250467 CCTCGGGACCCTTGCATATG 60.250 60.000 9.41 0.00 0.00 1.78
5352 5948 0.250467 CTCGGGACCCTTGCATATGG 60.250 60.000 9.41 0.00 0.00 2.74
5353 5949 0.692756 TCGGGACCCTTGCATATGGA 60.693 55.000 9.41 0.00 0.00 3.41
5354 5950 0.401738 CGGGACCCTTGCATATGGAT 59.598 55.000 9.41 0.00 0.00 3.41
5355 5951 1.202927 CGGGACCCTTGCATATGGATT 60.203 52.381 9.41 0.00 0.00 3.01
5356 5952 2.519013 GGGACCCTTGCATATGGATTC 58.481 52.381 2.09 0.00 0.00 2.52
5357 5953 2.108952 GGGACCCTTGCATATGGATTCT 59.891 50.000 2.09 0.00 0.00 2.40
5358 5954 3.437052 GGGACCCTTGCATATGGATTCTT 60.437 47.826 2.09 0.00 0.00 2.52
5359 5955 4.218312 GGACCCTTGCATATGGATTCTTT 58.782 43.478 4.56 0.00 0.00 2.52
5360 5956 4.651045 GGACCCTTGCATATGGATTCTTTT 59.349 41.667 4.56 0.00 0.00 2.27
5361 5957 5.129320 GGACCCTTGCATATGGATTCTTTTT 59.871 40.000 4.56 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.392595 GGCAACTATACATGCTTCCGAAAAA 60.393 40.000 0.00 0.00 42.20 1.94
25 26 4.095782 GGCAACTATACATGCTTCCGAAAA 59.904 41.667 0.00 0.00 42.20 2.29
26 27 3.625764 GGCAACTATACATGCTTCCGAAA 59.374 43.478 0.00 0.00 42.20 3.46
27 28 3.202906 GGCAACTATACATGCTTCCGAA 58.797 45.455 0.00 0.00 42.20 4.30
28 29 2.169561 TGGCAACTATACATGCTTCCGA 59.830 45.455 0.00 0.00 42.20 4.55
29 30 2.287915 GTGGCAACTATACATGCTTCCG 59.712 50.000 0.00 0.00 42.20 4.30
30 31 3.545703 AGTGGCAACTATACATGCTTCC 58.454 45.455 0.00 0.00 42.20 3.46
31 32 5.584649 TGTTAGTGGCAACTATACATGCTTC 59.415 40.000 0.65 0.79 42.20 3.86
32 33 5.496556 TGTTAGTGGCAACTATACATGCTT 58.503 37.500 0.65 0.00 42.20 3.91
33 34 5.097742 TGTTAGTGGCAACTATACATGCT 57.902 39.130 0.65 0.00 42.20 3.79
34 35 5.811399 TTGTTAGTGGCAACTATACATGC 57.189 39.130 0.65 0.00 38.69 4.06
35 36 7.139896 TGTTTGTTAGTGGCAACTATACATG 57.860 36.000 0.65 0.00 38.69 3.21
36 37 6.374333 CCTGTTTGTTAGTGGCAACTATACAT 59.626 38.462 0.65 0.00 38.69 2.29
37 38 5.703592 CCTGTTTGTTAGTGGCAACTATACA 59.296 40.000 0.65 6.94 38.69 2.29
38 39 5.704053 ACCTGTTTGTTAGTGGCAACTATAC 59.296 40.000 0.65 4.47 38.69 1.47
39 40 5.871834 ACCTGTTTGTTAGTGGCAACTATA 58.128 37.500 0.65 0.00 38.69 1.31
40 41 4.725490 ACCTGTTTGTTAGTGGCAACTAT 58.275 39.130 0.65 0.00 38.69 2.12
41 42 4.131596 GACCTGTTTGTTAGTGGCAACTA 58.868 43.478 0.00 0.00 37.88 2.24
42 43 2.949644 GACCTGTTTGTTAGTGGCAACT 59.050 45.455 0.00 0.00 40.67 3.16
43 44 2.685897 TGACCTGTTTGTTAGTGGCAAC 59.314 45.455 0.00 0.00 0.00 4.17
44 45 2.948979 CTGACCTGTTTGTTAGTGGCAA 59.051 45.455 0.00 0.00 0.00 4.52
45 46 2.092646 ACTGACCTGTTTGTTAGTGGCA 60.093 45.455 0.00 0.00 34.20 4.92
46 47 2.572290 ACTGACCTGTTTGTTAGTGGC 58.428 47.619 0.00 0.00 34.20 5.01
47 48 5.365619 AGTTACTGACCTGTTTGTTAGTGG 58.634 41.667 0.00 0.00 36.00 4.00
48 49 8.603242 ATTAGTTACTGACCTGTTTGTTAGTG 57.397 34.615 0.00 0.00 36.00 2.74
51 52 9.492973 GGTTATTAGTTACTGACCTGTTTGTTA 57.507 33.333 0.00 0.00 0.00 2.41
52 53 7.994334 TGGTTATTAGTTACTGACCTGTTTGTT 59.006 33.333 0.00 0.00 0.00 2.83
53 54 7.511268 TGGTTATTAGTTACTGACCTGTTTGT 58.489 34.615 0.00 0.00 0.00 2.83
54 55 7.972832 TGGTTATTAGTTACTGACCTGTTTG 57.027 36.000 0.00 0.00 0.00 2.93
69 70 8.677148 ACTGGTGCAACTAATATGGTTATTAG 57.323 34.615 2.04 9.96 46.87 1.73
70 71 9.550406 GTACTGGTGCAACTAATATGGTTATTA 57.450 33.333 2.04 0.00 36.74 0.98
71 72 8.272173 AGTACTGGTGCAACTAATATGGTTATT 58.728 33.333 2.04 0.00 36.74 1.40
72 73 7.715249 CAGTACTGGTGCAACTAATATGGTTAT 59.285 37.037 15.49 0.00 36.74 1.89
73 74 7.045416 CAGTACTGGTGCAACTAATATGGTTA 58.955 38.462 15.49 0.00 36.74 2.85
74 75 5.880332 CAGTACTGGTGCAACTAATATGGTT 59.120 40.000 15.49 0.00 36.74 3.67
75 76 5.428253 CAGTACTGGTGCAACTAATATGGT 58.572 41.667 15.49 0.00 36.74 3.55
76 77 4.273480 GCAGTACTGGTGCAACTAATATGG 59.727 45.833 23.95 0.00 40.86 2.74
77 78 5.409643 GCAGTACTGGTGCAACTAATATG 57.590 43.478 23.95 0.00 40.86 1.78
87 88 0.310854 GTTGGTTGCAGTACTGGTGC 59.689 55.000 23.95 11.60 41.59 5.01
88 89 0.951558 GGTTGGTTGCAGTACTGGTG 59.048 55.000 23.95 0.22 0.00 4.17
129 130 2.490115 TGTCCATTTCGGTGTTAATGCC 59.510 45.455 0.00 0.00 35.57 4.40
153 154 0.253044 CCCTCCACCGACATGTTCAT 59.747 55.000 0.00 0.00 0.00 2.57
244 245 5.100344 TCCTCTCGATGTAGTACAACTCT 57.900 43.478 7.16 0.00 0.00 3.24
255 256 2.037620 GCATGGCCTCCTCTCGATGT 62.038 60.000 3.32 0.00 0.00 3.06
256 257 1.301558 GCATGGCCTCCTCTCGATG 60.302 63.158 3.32 0.00 0.00 3.84
257 258 1.053264 AAGCATGGCCTCCTCTCGAT 61.053 55.000 3.32 0.00 0.00 3.59
258 259 1.267574 AAAGCATGGCCTCCTCTCGA 61.268 55.000 3.32 0.00 0.00 4.04
260 261 0.254178 TCAAAGCATGGCCTCCTCTC 59.746 55.000 3.32 0.00 0.00 3.20
262 263 1.772836 AATCAAAGCATGGCCTCCTC 58.227 50.000 3.32 0.00 0.00 3.71
264 265 2.105766 AGAAATCAAAGCATGGCCTCC 58.894 47.619 3.32 0.00 0.00 4.30
278 288 4.203950 TGCAACACAACGTACAGAAATC 57.796 40.909 0.00 0.00 0.00 2.17
327 337 6.399743 TGTTCCGCTAGTAAAATCACACATA 58.600 36.000 0.00 0.00 0.00 2.29
372 389 2.746277 ATGGGAGGACGCGCAAAC 60.746 61.111 5.73 0.00 34.27 2.93
444 465 4.980805 GCTGTGTGCGGGACCGAA 62.981 66.667 15.99 0.00 42.83 4.30
498 864 1.808411 TTCAGTGCTAGCTTTTCGGG 58.192 50.000 17.23 0.00 0.00 5.14
520 886 1.068055 GCTCAGGGCAAACTGTGATTG 60.068 52.381 8.07 0.00 41.35 2.67
521 887 1.202976 AGCTCAGGGCAAACTGTGATT 60.203 47.619 0.00 0.00 44.79 2.57
522 888 0.403271 AGCTCAGGGCAAACTGTGAT 59.597 50.000 0.00 0.40 44.79 3.06
523 889 0.535780 CAGCTCAGGGCAAACTGTGA 60.536 55.000 0.00 0.00 44.79 3.58
524 890 0.535780 TCAGCTCAGGGCAAACTGTG 60.536 55.000 0.00 2.12 44.79 3.66
525 891 0.250640 CTCAGCTCAGGGCAAACTGT 60.251 55.000 0.00 0.00 44.79 3.55
526 892 1.584380 GCTCAGCTCAGGGCAAACTG 61.584 60.000 0.00 0.00 44.79 3.16
527 893 1.303155 GCTCAGCTCAGGGCAAACT 60.303 57.895 0.00 0.00 44.79 2.66
528 894 1.303155 AGCTCAGCTCAGGGCAAAC 60.303 57.895 0.00 0.00 44.79 2.93
529 895 1.303074 CAGCTCAGCTCAGGGCAAA 60.303 57.895 0.00 0.00 44.79 3.68
530 896 2.181445 CTCAGCTCAGCTCAGGGCAA 62.181 60.000 0.00 0.00 44.79 4.52
531 897 2.605601 TCAGCTCAGCTCAGGGCA 60.606 61.111 0.00 0.00 44.79 5.36
532 898 2.187424 CTCAGCTCAGCTCAGGGC 59.813 66.667 0.00 0.00 36.40 5.19
533 899 2.187424 GCTCAGCTCAGCTCAGGG 59.813 66.667 0.67 0.00 36.40 4.45
562 928 3.717294 CTCGGAAGGGGGTGGTGG 61.717 72.222 0.00 0.00 0.00 4.61
563 929 4.410400 GCTCGGAAGGGGGTGGTG 62.410 72.222 0.00 0.00 0.00 4.17
564 930 4.658786 AGCTCGGAAGGGGGTGGT 62.659 66.667 0.00 0.00 0.00 4.16
565 931 3.787001 GAGCTCGGAAGGGGGTGG 61.787 72.222 0.00 0.00 0.00 4.61
566 932 3.787001 GGAGCTCGGAAGGGGGTG 61.787 72.222 7.83 0.00 0.00 4.61
567 933 4.332543 TGGAGCTCGGAAGGGGGT 62.333 66.667 7.83 0.00 0.00 4.95
568 934 3.787001 GTGGAGCTCGGAAGGGGG 61.787 72.222 7.83 0.00 0.00 5.40
591 957 3.884037 AGAAAAAGGTGTGGGACTGAT 57.116 42.857 0.00 0.00 0.00 2.90
620 992 4.519437 CTCGGATGCTGCCTGCGA 62.519 66.667 18.77 18.77 46.63 5.10
639 1018 4.675510 CAAAGCATCTCTCTGTCTCTCTC 58.324 47.826 0.00 0.00 0.00 3.20
640 1019 3.119029 GCAAAGCATCTCTCTGTCTCTCT 60.119 47.826 0.00 0.00 0.00 3.10
641 1020 3.189285 GCAAAGCATCTCTCTGTCTCTC 58.811 50.000 0.00 0.00 0.00 3.20
642 1021 2.093553 GGCAAAGCATCTCTCTGTCTCT 60.094 50.000 0.00 0.00 0.00 3.10
643 1022 2.093553 AGGCAAAGCATCTCTCTGTCTC 60.094 50.000 0.00 0.00 0.00 3.36
644 1023 1.907936 AGGCAAAGCATCTCTCTGTCT 59.092 47.619 0.00 0.00 0.00 3.41
646 1025 1.065564 GGAGGCAAAGCATCTCTCTGT 60.066 52.381 3.61 0.00 39.44 3.41
647 1026 1.666054 GGAGGCAAAGCATCTCTCTG 58.334 55.000 3.61 0.00 39.44 3.35
648 1027 0.545646 GGGAGGCAAAGCATCTCTCT 59.454 55.000 3.61 0.00 36.85 3.10
649 1028 0.254178 TGGGAGGCAAAGCATCTCTC 59.746 55.000 5.10 0.00 40.75 3.20
650 1029 0.700564 TTGGGAGGCAAAGCATCTCT 59.299 50.000 5.10 0.00 40.75 3.10
651 1030 0.813821 GTTGGGAGGCAAAGCATCTC 59.186 55.000 3.61 0.00 40.52 2.75
652 1031 0.613012 GGTTGGGAGGCAAAGCATCT 60.613 55.000 3.61 0.00 39.44 2.90
653 1032 1.893062 GGTTGGGAGGCAAAGCATC 59.107 57.895 0.00 0.00 38.72 3.91
654 1033 1.978617 CGGTTGGGAGGCAAAGCAT 60.979 57.895 0.00 0.00 0.00 3.79
655 1034 2.058125 TACGGTTGGGAGGCAAAGCA 62.058 55.000 0.00 0.00 0.00 3.91
656 1035 0.891904 TTACGGTTGGGAGGCAAAGC 60.892 55.000 0.00 0.00 0.00 3.51
657 1036 0.879090 GTTACGGTTGGGAGGCAAAG 59.121 55.000 0.00 0.00 0.00 2.77
658 1037 0.183014 TGTTACGGTTGGGAGGCAAA 59.817 50.000 0.00 0.00 0.00 3.68
784 1163 6.154203 AGAAAGAAAGAAAGAAAAGGCAGG 57.846 37.500 0.00 0.00 0.00 4.85
808 1187 3.587797 CAATGGCTGCTGACAAAAGAT 57.412 42.857 2.14 0.00 33.27 2.40
860 1259 2.199291 AACGAACTTATACGCGGAGG 57.801 50.000 12.47 0.00 0.00 4.30
877 1276 2.473816 GAAGTGGCCAAAGCAAGAAAC 58.526 47.619 7.24 0.00 42.56 2.78
880 1279 1.172180 CGGAAGTGGCCAAAGCAAGA 61.172 55.000 7.24 0.00 42.56 3.02
949 1361 1.762460 AACGGGGGAGATGAGCGAT 60.762 57.895 0.00 0.00 0.00 4.58
978 1390 1.229820 TCCCTGCCCTTCCAAGCTA 60.230 57.895 0.00 0.00 0.00 3.32
1012 1424 2.044551 GAGCAGGGCAAGAAGGGG 60.045 66.667 0.00 0.00 0.00 4.79
1013 1425 2.044551 GGAGCAGGGCAAGAAGGG 60.045 66.667 0.00 0.00 0.00 3.95
1024 1436 1.078848 CCAAGAACCCGAGGAGCAG 60.079 63.158 0.00 0.00 0.00 4.24
1183 1595 3.463329 TCTGGGAGGAGGGGATTTAATTG 59.537 47.826 0.00 0.00 0.00 2.32
1196 1608 3.766545 CAAAGGAACAATTCTGGGAGGA 58.233 45.455 0.00 0.00 0.00 3.71
1197 1609 2.232208 GCAAAGGAACAATTCTGGGAGG 59.768 50.000 0.00 0.00 0.00 4.30
1215 1627 1.608025 GCTACTAGCACACACAGGCAA 60.608 52.381 2.96 0.00 41.89 4.52
1265 1712 4.155826 TCTCAACGACATGGCCAATAAAAG 59.844 41.667 10.96 1.71 0.00 2.27
1282 1729 0.729116 CCCGCATCACACATCTCAAC 59.271 55.000 0.00 0.00 0.00 3.18
1283 1730 0.324614 ACCCGCATCACACATCTCAA 59.675 50.000 0.00 0.00 0.00 3.02
1284 1731 0.108186 GACCCGCATCACACATCTCA 60.108 55.000 0.00 0.00 0.00 3.27
1285 1732 1.148157 CGACCCGCATCACACATCTC 61.148 60.000 0.00 0.00 0.00 2.75
1286 1733 1.153568 CGACCCGCATCACACATCT 60.154 57.895 0.00 0.00 0.00 2.90
1287 1734 3.398920 CGACCCGCATCACACATC 58.601 61.111 0.00 0.00 0.00 3.06
1333 1806 7.064966 GGCAATAGGGAATCAGAAAAATTGTTG 59.935 37.037 0.00 0.00 0.00 3.33
1351 1824 4.042062 TCACAATCCCTCTATGGCAATAGG 59.958 45.833 8.31 0.00 37.06 2.57
1417 1910 5.292834 AGACTGCATGATCACTTAATCAACG 59.707 40.000 0.00 0.00 39.04 4.10
1556 2061 3.459598 CCCCAATTAGGTGAGGAGAATCA 59.540 47.826 0.00 0.00 32.98 2.57
1634 2140 0.813184 AGAATGGCGACCAAGCAATG 59.187 50.000 2.68 0.00 36.95 2.82
1646 2152 7.856415 AGGACCTCTGATATATTTAGAATGGC 58.144 38.462 0.00 0.00 0.00 4.40
1733 2239 3.052082 CAGTTCAGCACCGCCCTG 61.052 66.667 0.00 0.00 0.00 4.45
1814 2321 0.605319 TCCAAAGCAGTTGCCGGTAG 60.605 55.000 1.90 0.00 43.38 3.18
1868 2375 3.519667 TGGAAAGAATTGCCCCTGAATT 58.480 40.909 0.00 0.00 0.00 2.17
1869 2376 3.188880 TGGAAAGAATTGCCCCTGAAT 57.811 42.857 0.00 0.00 0.00 2.57
1876 2383 7.346751 TCTGGTATAAATGGAAAGAATTGCC 57.653 36.000 0.00 0.00 0.00 4.52
1925 2432 8.091449 AGTAAGCATCAGTATATTTAGCAGACC 58.909 37.037 0.00 0.00 0.00 3.85
1927 2434 9.698309 GAAGTAAGCATCAGTATATTTAGCAGA 57.302 33.333 0.00 0.00 0.00 4.26
2109 2619 1.816224 GGCATTTACAATCCGTGGTGT 59.184 47.619 0.00 0.00 0.00 4.16
2143 2653 3.377172 CACCCTGGAATTCGATTTGGTAC 59.623 47.826 0.00 0.00 0.00 3.34
2311 2821 2.961526 TATGAGAAGTTCGGGACAGC 57.038 50.000 0.00 0.00 0.00 4.40
2412 2924 6.223120 ACAAGAAAACAGCATTACAATTCCC 58.777 36.000 0.00 0.00 0.00 3.97
2736 3278 1.705337 CCTGCCAAATACGCTGACCG 61.705 60.000 0.00 0.00 44.21 4.79
2772 3314 0.904394 AACGCATTCCTTGGGCCATT 60.904 50.000 7.26 0.00 41.83 3.16
2830 3373 9.113838 TGATTTGCCAAAAGCTATTTACAAAAA 57.886 25.926 16.37 10.60 44.23 1.94
2839 3382 9.452287 AAACATAAATGATTTGCCAAAAGCTAT 57.548 25.926 0.00 0.00 44.23 2.97
2874 3417 1.562475 GGGCCTGGTGGTATCAAGTTA 59.438 52.381 0.84 0.00 35.27 2.24
3051 3594 4.379339 AAGGCACAAAATGTAACAACGT 57.621 36.364 0.00 0.00 0.00 3.99
3113 3656 4.218417 ACCTTAACATGCCATTGAAGTGAC 59.782 41.667 0.00 0.00 0.00 3.67
3114 3657 4.218200 CACCTTAACATGCCATTGAAGTGA 59.782 41.667 0.00 0.00 0.00 3.41
3254 3798 7.643123 ACCAAGAAAGGGTTATCATGAAGTAT 58.357 34.615 0.00 0.00 34.10 2.12
3260 3804 6.094048 CACAGTACCAAGAAAGGGTTATCATG 59.906 42.308 0.00 0.00 39.85 3.07
3261 3805 6.180472 CACAGTACCAAGAAAGGGTTATCAT 58.820 40.000 0.00 0.00 39.85 2.45
3269 3813 4.580580 AGAAAAGCACAGTACCAAGAAAGG 59.419 41.667 0.00 0.00 0.00 3.11
3324 3872 4.621068 ATTGTCGTTGGCACATCAATAG 57.379 40.909 0.00 0.00 39.30 1.73
3329 3877 4.332543 TGAAGATATTGTCGTTGGCACATC 59.667 41.667 0.00 0.00 39.30 3.06
3544 4099 2.970324 GGCAACACGTTCTGCGGA 60.970 61.111 11.43 0.00 46.52 5.54
3620 4175 4.782019 TCACAGGGTTAAAATGCATGAC 57.218 40.909 0.00 0.00 0.00 3.06
3673 4229 9.883142 AAGAAAAATTGGTTTCACTGAATAACA 57.117 25.926 5.62 0.00 39.52 2.41
3682 4238 9.967245 GAAAAGTACAAGAAAAATTGGTTTCAC 57.033 29.630 5.62 0.00 39.52 3.18
3689 4245 8.424274 AAGCTGGAAAAGTACAAGAAAAATTG 57.576 30.769 0.00 0.00 36.22 2.32
3703 4259 5.517904 CAGACTTTCTTGAAGCTGGAAAAG 58.482 41.667 0.00 2.83 39.04 2.27
3865 4424 4.293494 AGGAAGATCAGCCAATCTACTCA 58.707 43.478 6.64 0.00 34.90 3.41
3884 4443 6.874278 AGCCTGCATTATACATACATAGGA 57.126 37.500 0.00 0.00 0.00 2.94
3887 4446 8.821817 TCCTAAAGCCTGCATTATACATACATA 58.178 33.333 0.00 0.00 0.00 2.29
3888 4447 7.689299 TCCTAAAGCCTGCATTATACATACAT 58.311 34.615 0.00 0.00 0.00 2.29
3889 4448 7.073457 TCCTAAAGCCTGCATTATACATACA 57.927 36.000 0.00 0.00 0.00 2.29
3890 4449 7.979444 TTCCTAAAGCCTGCATTATACATAC 57.021 36.000 0.00 0.00 0.00 2.39
3945 4504 2.124570 CCATTCTGCCCTGACCCG 60.125 66.667 0.00 0.00 0.00 5.28
3966 4525 3.667960 GCGCGAAACAAGAGTTGATGAAT 60.668 43.478 12.10 0.00 38.17 2.57
3969 4528 1.069973 TGCGCGAAACAAGAGTTGATG 60.070 47.619 12.10 0.00 38.17 3.07
3987 4546 1.153489 TCTCTCGCTCTGGCAATGC 60.153 57.895 0.00 0.00 38.60 3.56
4032 4591 4.473643 TTGTTGCCAAGACGAGGG 57.526 55.556 0.00 0.00 0.00 4.30
4079 4638 6.882678 GTGTACTCCCTTCTATTGCCTAAAAA 59.117 38.462 0.00 0.00 0.00 1.94
4100 4659 1.283905 TGATCTGAGACCGGGAGTGTA 59.716 52.381 6.32 0.00 0.00 2.90
4108 4667 1.599171 GCATCGAGTGATCTGAGACCG 60.599 57.143 0.00 0.00 30.49 4.79
4112 4671 2.191802 GTGTGCATCGAGTGATCTGAG 58.808 52.381 0.00 0.00 30.49 3.35
4114 4673 2.000429 TGTGTGCATCGAGTGATCTG 58.000 50.000 0.00 0.00 30.49 2.90
4121 4681 1.349234 TCGTCATTGTGTGCATCGAG 58.651 50.000 0.00 0.00 0.00 4.04
4123 4683 1.331420 CGATCGTCATTGTGTGCATCG 60.331 52.381 7.03 0.00 0.00 3.84
4135 4695 1.134848 TGGCATGTTCATCGATCGTCA 60.135 47.619 15.94 8.31 0.00 4.35
4142 4702 9.169468 GTTAAAAATAGTATGGCATGTTCATCG 57.831 33.333 10.98 0.00 0.00 3.84
4164 4726 9.554395 TGACTTGACATGTTATTGAGAAGTTAA 57.446 29.630 0.00 0.00 0.00 2.01
4166 4728 7.041098 GGTGACTTGACATGTTATTGAGAAGTT 60.041 37.037 0.00 0.00 0.00 2.66
4167 4729 6.428159 GGTGACTTGACATGTTATTGAGAAGT 59.572 38.462 0.00 0.00 0.00 3.01
4177 4739 2.620115 CAAGCAGGTGACTTGACATGTT 59.380 45.455 0.00 0.00 45.99 2.71
4178 4740 2.224606 CAAGCAGGTGACTTGACATGT 58.775 47.619 0.00 0.00 45.99 3.21
4195 4757 3.691609 GGTTTCATCAGAGGCTAACCAAG 59.308 47.826 7.96 0.00 39.06 3.61
4197 4759 2.912956 AGGTTTCATCAGAGGCTAACCA 59.087 45.455 13.87 0.00 37.95 3.67
4199 4761 3.198853 AGGAGGTTTCATCAGAGGCTAAC 59.801 47.826 0.00 0.00 0.00 2.34
4201 4763 3.034635 GAGGAGGTTTCATCAGAGGCTA 58.965 50.000 0.00 0.00 34.36 3.93
4202 4764 1.836802 GAGGAGGTTTCATCAGAGGCT 59.163 52.381 0.00 0.00 34.36 4.58
4203 4765 1.836802 AGAGGAGGTTTCATCAGAGGC 59.163 52.381 0.00 0.00 36.61 4.70
4204 4766 3.102972 TGAGAGGAGGTTTCATCAGAGG 58.897 50.000 0.00 0.00 36.61 3.69
4205 4767 5.129155 AGAATGAGAGGAGGTTTCATCAGAG 59.871 44.000 0.00 0.00 36.61 3.35
4206 4768 5.028802 AGAATGAGAGGAGGTTTCATCAGA 58.971 41.667 0.00 0.00 36.61 3.27
4217 4779 3.681897 CACGTCCAAAAGAATGAGAGGAG 59.318 47.826 0.00 0.00 0.00 3.69
4227 4789 2.613026 TTCTCTGCACGTCCAAAAGA 57.387 45.000 0.00 0.00 0.00 2.52
4233 4795 1.416813 CTGCGATTCTCTGCACGTCC 61.417 60.000 0.00 0.00 35.90 4.79
4516 5097 2.925162 AATAACGCAGAGGGCCTCGC 62.925 60.000 28.71 28.71 40.31 5.03
4546 5127 4.318831 GGCAATGGAAAGAATCGACGATAC 60.319 45.833 11.42 1.20 0.00 2.24
4588 5170 5.649395 CAGTGTGGTCCAAATGTTCAGATAT 59.351 40.000 0.00 0.00 0.00 1.63
4687 5269 1.853963 TGACTAGACTGGAAGGGAGC 58.146 55.000 0.00 0.00 39.30 4.70
4696 5278 3.066900 CCCCTACGAACATGACTAGACTG 59.933 52.174 0.00 0.00 0.00 3.51
4912 5508 0.102481 ACGCACGGGCATTCTACTAG 59.898 55.000 11.77 0.00 41.24 2.57
4913 5509 0.533491 AACGCACGGGCATTCTACTA 59.467 50.000 11.77 0.00 41.24 1.82
4914 5510 1.019278 CAACGCACGGGCATTCTACT 61.019 55.000 11.77 0.00 41.24 2.57
4915 5511 1.423845 CAACGCACGGGCATTCTAC 59.576 57.895 11.77 0.00 41.24 2.59
4916 5512 2.395360 GCAACGCACGGGCATTCTA 61.395 57.895 11.77 0.00 41.24 2.10
4917 5513 2.796483 TAGCAACGCACGGGCATTCT 62.796 55.000 11.77 2.86 41.24 2.40
4918 5514 2.395360 TAGCAACGCACGGGCATTC 61.395 57.895 11.77 0.00 41.24 2.67
4919 5515 2.359354 TAGCAACGCACGGGCATT 60.359 55.556 11.77 0.00 41.24 3.56
4920 5516 3.124921 GTAGCAACGCACGGGCAT 61.125 61.111 11.77 0.00 41.24 4.40
4930 5526 1.305930 CCTCAAAGGCCCGTAGCAAC 61.306 60.000 0.00 0.00 46.50 4.17
4931 5527 1.002624 CCTCAAAGGCCCGTAGCAA 60.003 57.895 0.00 0.00 46.50 3.91
4932 5528 2.668632 CCTCAAAGGCCCGTAGCA 59.331 61.111 0.00 0.00 46.50 3.49
4941 5537 0.113190 ACCAAAGGAGGCCTCAAAGG 59.887 55.000 33.29 27.57 38.80 3.11
4942 5538 1.889170 GAACCAAAGGAGGCCTCAAAG 59.111 52.381 33.29 18.94 30.89 2.77
4943 5539 1.817740 CGAACCAAAGGAGGCCTCAAA 60.818 52.381 33.29 0.00 30.89 2.69
4944 5540 0.250727 CGAACCAAAGGAGGCCTCAA 60.251 55.000 33.29 0.00 30.89 3.02
4945 5541 1.374947 CGAACCAAAGGAGGCCTCA 59.625 57.895 33.29 0.00 30.89 3.86
4946 5542 1.377333 CCGAACCAAAGGAGGCCTC 60.377 63.158 25.59 25.59 30.89 4.70
4947 5543 1.846124 TCCGAACCAAAGGAGGCCT 60.846 57.895 3.86 3.86 33.87 5.19
4948 5544 2.754375 TCCGAACCAAAGGAGGCC 59.246 61.111 0.00 0.00 31.95 5.19
4952 5548 7.338449 CCTATAAATTTTCTCCGAACCAAAGGA 59.662 37.037 0.00 0.00 34.93 3.36
4953 5549 7.338449 TCCTATAAATTTTCTCCGAACCAAAGG 59.662 37.037 0.00 0.00 0.00 3.11
4954 5550 8.276252 TCCTATAAATTTTCTCCGAACCAAAG 57.724 34.615 0.00 0.00 0.00 2.77
4955 5551 8.638629 TTCCTATAAATTTTCTCCGAACCAAA 57.361 30.769 0.00 0.00 0.00 3.28
4956 5552 8.817092 ATTCCTATAAATTTTCTCCGAACCAA 57.183 30.769 0.00 0.00 0.00 3.67
4957 5553 8.817092 AATTCCTATAAATTTTCTCCGAACCA 57.183 30.769 0.00 0.00 0.00 3.67
4958 5554 9.121658 AGAATTCCTATAAATTTTCTCCGAACC 57.878 33.333 0.65 0.00 0.00 3.62
5010 5606 9.816787 TCCTACAAACCAAAGGACTTTTAATAT 57.183 29.630 0.00 0.00 34.46 1.28
5011 5607 9.643735 TTCCTACAAACCAAAGGACTTTTAATA 57.356 29.630 0.00 0.00 39.13 0.98
5012 5608 8.541899 TTCCTACAAACCAAAGGACTTTTAAT 57.458 30.769 0.00 0.00 39.13 1.40
5013 5609 7.957992 TTCCTACAAACCAAAGGACTTTTAA 57.042 32.000 0.00 0.00 39.13 1.52
5014 5610 9.292195 CTATTCCTACAAACCAAAGGACTTTTA 57.708 33.333 0.00 0.00 39.13 1.52
5015 5611 8.002459 TCTATTCCTACAAACCAAAGGACTTTT 58.998 33.333 0.00 0.00 39.13 2.27
5016 5612 7.523415 TCTATTCCTACAAACCAAAGGACTTT 58.477 34.615 0.00 0.00 39.13 2.66
5017 5613 7.086685 TCTATTCCTACAAACCAAAGGACTT 57.913 36.000 0.00 0.00 39.13 3.01
5018 5614 6.697641 TCTATTCCTACAAACCAAAGGACT 57.302 37.500 0.00 0.00 39.13 3.85
5019 5615 7.610305 TGAATCTATTCCTACAAACCAAAGGAC 59.390 37.037 0.41 0.00 39.13 3.85
5020 5616 7.695055 TGAATCTATTCCTACAAACCAAAGGA 58.305 34.615 0.41 0.00 37.64 3.36
5021 5617 7.938140 TGAATCTATTCCTACAAACCAAAGG 57.062 36.000 0.41 0.00 35.97 3.11
5048 5644 9.408648 GGATAAGAAGAATTTTGTCCATAGGAA 57.591 33.333 0.01 0.00 35.41 3.36
5049 5645 8.781951 AGGATAAGAAGAATTTTGTCCATAGGA 58.218 33.333 6.26 0.00 37.13 2.94
5050 5646 8.986929 AGGATAAGAAGAATTTTGTCCATAGG 57.013 34.615 6.26 0.00 37.13 2.57
5052 5648 9.973661 TGAAGGATAAGAAGAATTTTGTCCATA 57.026 29.630 6.26 0.00 37.13 2.74
5053 5649 8.743714 GTGAAGGATAAGAAGAATTTTGTCCAT 58.256 33.333 6.26 0.00 37.13 3.41
5054 5650 7.723616 TGTGAAGGATAAGAAGAATTTTGTCCA 59.276 33.333 6.26 0.00 37.13 4.02
5055 5651 8.110860 TGTGAAGGATAAGAAGAATTTTGTCC 57.889 34.615 0.00 0.00 35.51 4.02
5095 5691 9.729281 TTTTTCCGTTGAGTCTAGGTTAATATT 57.271 29.630 0.00 0.00 0.00 1.28
5120 5716 9.270707 TCCTTTCATTCATATCCTTGGATTTTT 57.729 29.630 7.52 0.00 0.00 1.94
5121 5717 8.699130 GTCCTTTCATTCATATCCTTGGATTTT 58.301 33.333 7.52 0.00 0.00 1.82
5122 5718 7.840716 TGTCCTTTCATTCATATCCTTGGATTT 59.159 33.333 7.52 0.00 0.00 2.17
5123 5719 7.356680 TGTCCTTTCATTCATATCCTTGGATT 58.643 34.615 7.52 0.00 0.00 3.01
5124 5720 6.914665 TGTCCTTTCATTCATATCCTTGGAT 58.085 36.000 7.37 7.37 0.00 3.41
5125 5721 6.325993 TGTCCTTTCATTCATATCCTTGGA 57.674 37.500 0.00 0.00 0.00 3.53
5126 5722 7.002879 AGATGTCCTTTCATTCATATCCTTGG 58.997 38.462 0.00 0.00 0.00 3.61
5127 5723 7.937942 AGAGATGTCCTTTCATTCATATCCTTG 59.062 37.037 0.00 0.00 31.53 3.61
5128 5724 8.043429 AGAGATGTCCTTTCATTCATATCCTT 57.957 34.615 0.00 0.00 31.53 3.36
5129 5725 7.630005 AGAGATGTCCTTTCATTCATATCCT 57.370 36.000 0.00 0.00 31.53 3.24
5130 5726 8.688747 AAAGAGATGTCCTTTCATTCATATCC 57.311 34.615 0.00 0.00 31.53 2.59
5132 5728 9.129532 GGAAAAGAGATGTCCTTTCATTCATAT 57.870 33.333 14.04 0.00 33.15 1.78
5133 5729 8.331740 AGGAAAAGAGATGTCCTTTCATTCATA 58.668 33.333 14.04 0.00 38.71 2.15
5134 5730 7.180663 AGGAAAAGAGATGTCCTTTCATTCAT 58.819 34.615 14.04 0.00 38.71 2.57
5135 5731 6.546484 AGGAAAAGAGATGTCCTTTCATTCA 58.454 36.000 14.04 0.00 38.71 2.57
5136 5732 8.744568 ATAGGAAAAGAGATGTCCTTTCATTC 57.255 34.615 14.04 0.18 42.00 2.67
5138 5734 9.620259 GTAATAGGAAAAGAGATGTCCTTTCAT 57.380 33.333 14.04 10.33 42.00 2.57
5139 5735 8.826765 AGTAATAGGAAAAGAGATGTCCTTTCA 58.173 33.333 14.04 0.00 42.00 2.69
5179 5775 8.363390 TGTAGGAAATGAGATGTCATGTATCTC 58.637 37.037 23.76 23.76 43.04 2.75
5180 5776 8.255111 TGTAGGAAATGAGATGTCATGTATCT 57.745 34.615 6.05 12.80 43.04 1.98
5181 5777 8.893219 TTGTAGGAAATGAGATGTCATGTATC 57.107 34.615 6.05 5.69 43.04 2.24
5182 5778 8.489489 ACTTGTAGGAAATGAGATGTCATGTAT 58.511 33.333 6.05 0.00 43.04 2.29
5183 5779 7.851228 ACTTGTAGGAAATGAGATGTCATGTA 58.149 34.615 6.05 0.00 43.04 2.29
5184 5780 6.715280 ACTTGTAGGAAATGAGATGTCATGT 58.285 36.000 6.05 0.00 43.04 3.21
5185 5781 7.621428 AACTTGTAGGAAATGAGATGTCATG 57.379 36.000 6.05 0.00 43.04 3.07
5186 5782 8.641498 AAAACTTGTAGGAAATGAGATGTCAT 57.359 30.769 0.00 0.00 46.01 3.06
5187 5783 9.739276 ATAAAACTTGTAGGAAATGAGATGTCA 57.261 29.630 0.00 0.00 37.02 3.58
5223 5819 8.927411 CCCTTTGATTTGTAGGAATGGAATAAT 58.073 33.333 0.00 0.00 0.00 1.28
5224 5820 7.344352 CCCCTTTGATTTGTAGGAATGGAATAA 59.656 37.037 0.00 0.00 0.00 1.40
5225 5821 6.838612 CCCCTTTGATTTGTAGGAATGGAATA 59.161 38.462 0.00 0.00 0.00 1.75
5226 5822 5.662657 CCCCTTTGATTTGTAGGAATGGAAT 59.337 40.000 0.00 0.00 0.00 3.01
5227 5823 5.022787 CCCCTTTGATTTGTAGGAATGGAA 58.977 41.667 0.00 0.00 0.00 3.53
5228 5824 4.571792 CCCCCTTTGATTTGTAGGAATGGA 60.572 45.833 0.00 0.00 0.00 3.41
5229 5825 3.706086 CCCCCTTTGATTTGTAGGAATGG 59.294 47.826 0.00 0.00 0.00 3.16
5230 5826 3.132824 GCCCCCTTTGATTTGTAGGAATG 59.867 47.826 0.00 0.00 0.00 2.67
5231 5827 3.012844 AGCCCCCTTTGATTTGTAGGAAT 59.987 43.478 0.00 0.00 0.00 3.01
5232 5828 2.381961 AGCCCCCTTTGATTTGTAGGAA 59.618 45.455 0.00 0.00 0.00 3.36
5233 5829 2.000048 AGCCCCCTTTGATTTGTAGGA 59.000 47.619 0.00 0.00 0.00 2.94
5234 5830 2.532250 AGCCCCCTTTGATTTGTAGG 57.468 50.000 0.00 0.00 0.00 3.18
5251 5847 2.564771 AGCAAAAGAAAAGGCCAAAGC 58.435 42.857 5.01 0.00 38.76 3.51
5252 5848 3.242837 GCAAGCAAAAGAAAAGGCCAAAG 60.243 43.478 5.01 0.00 0.00 2.77
5253 5849 2.682352 GCAAGCAAAAGAAAAGGCCAAA 59.318 40.909 5.01 0.00 0.00 3.28
5254 5850 2.287769 GCAAGCAAAAGAAAAGGCCAA 58.712 42.857 5.01 0.00 0.00 4.52
5255 5851 1.209019 TGCAAGCAAAAGAAAAGGCCA 59.791 42.857 5.01 0.00 0.00 5.36
5256 5852 1.952193 TGCAAGCAAAAGAAAAGGCC 58.048 45.000 0.00 0.00 0.00 5.19
5257 5853 5.409214 TGAATATGCAAGCAAAAGAAAAGGC 59.591 36.000 0.00 0.00 0.00 4.35
5258 5854 7.424227 TTGAATATGCAAGCAAAAGAAAAGG 57.576 32.000 0.00 0.00 0.00 3.11
5262 5858 9.656040 ACAATATTGAATATGCAAGCAAAAGAA 57.344 25.926 22.16 0.00 0.00 2.52
5263 5859 9.656040 AACAATATTGAATATGCAAGCAAAAGA 57.344 25.926 22.16 0.00 0.00 2.52
5264 5860 9.697250 CAACAATATTGAATATGCAAGCAAAAG 57.303 29.630 22.16 0.00 0.00 2.27
5265 5861 9.217278 ACAACAATATTGAATATGCAAGCAAAA 57.783 25.926 22.16 0.00 0.00 2.44
5266 5862 8.774890 ACAACAATATTGAATATGCAAGCAAA 57.225 26.923 22.16 0.00 0.00 3.68
5286 5882 8.963130 CGAAAATTTTCTGTGCTTTATACAACA 58.037 29.630 24.53 0.00 35.07 3.33
5287 5883 8.424731 CCGAAAATTTTCTGTGCTTTATACAAC 58.575 33.333 24.53 0.00 35.07 3.32
5288 5884 7.115663 GCCGAAAATTTTCTGTGCTTTATACAA 59.884 33.333 24.53 0.00 35.07 2.41
5289 5885 6.584563 GCCGAAAATTTTCTGTGCTTTATACA 59.415 34.615 24.53 0.00 35.07 2.29
5290 5886 6.034577 GGCCGAAAATTTTCTGTGCTTTATAC 59.965 38.462 24.53 9.72 35.07 1.47
5291 5887 6.096695 GGCCGAAAATTTTCTGTGCTTTATA 58.903 36.000 24.53 0.00 35.07 0.98
5292 5888 4.929211 GGCCGAAAATTTTCTGTGCTTTAT 59.071 37.500 24.53 0.00 35.07 1.40
5293 5889 4.303282 GGCCGAAAATTTTCTGTGCTTTA 58.697 39.130 24.53 0.00 35.07 1.85
5294 5890 3.130633 GGCCGAAAATTTTCTGTGCTTT 58.869 40.909 24.53 0.00 35.07 3.51
5295 5891 2.547855 GGGCCGAAAATTTTCTGTGCTT 60.548 45.455 24.53 0.00 35.07 3.91
5296 5892 1.000843 GGGCCGAAAATTTTCTGTGCT 59.999 47.619 24.53 0.00 35.07 4.40
5297 5893 1.428448 GGGCCGAAAATTTTCTGTGC 58.572 50.000 24.53 22.00 35.07 4.57
5298 5894 1.618343 AGGGGCCGAAAATTTTCTGTG 59.382 47.619 24.53 15.38 35.07 3.66
5299 5895 2.009681 AGGGGCCGAAAATTTTCTGT 57.990 45.000 24.53 3.88 35.07 3.41
5300 5896 2.353704 GGAAGGGGCCGAAAATTTTCTG 60.354 50.000 24.53 20.12 35.07 3.02
5301 5897 1.899814 GGAAGGGGCCGAAAATTTTCT 59.100 47.619 24.53 7.66 35.07 2.52
5302 5898 1.621317 TGGAAGGGGCCGAAAATTTTC 59.379 47.619 19.08 19.08 0.00 2.29
5303 5899 1.723288 TGGAAGGGGCCGAAAATTTT 58.277 45.000 2.28 2.28 0.00 1.82
5304 5900 1.723288 TTGGAAGGGGCCGAAAATTT 58.277 45.000 0.00 0.00 0.00 1.82
5305 5901 1.623311 CTTTGGAAGGGGCCGAAAATT 59.377 47.619 0.00 0.00 31.03 1.82
5306 5902 1.203125 TCTTTGGAAGGGGCCGAAAAT 60.203 47.619 0.00 0.00 31.03 1.82
5307 5903 0.186386 TCTTTGGAAGGGGCCGAAAA 59.814 50.000 0.00 0.00 31.03 2.29
5308 5904 0.538746 GTCTTTGGAAGGGGCCGAAA 60.539 55.000 0.00 0.00 31.03 3.46
5309 5905 1.074248 GTCTTTGGAAGGGGCCGAA 59.926 57.895 0.00 0.00 0.00 4.30
5310 5906 1.497309 ATGTCTTTGGAAGGGGCCGA 61.497 55.000 0.00 0.00 0.00 5.54
5311 5907 0.611896 AATGTCTTTGGAAGGGGCCG 60.612 55.000 0.00 0.00 0.00 6.13
5312 5908 0.897621 CAATGTCTTTGGAAGGGGCC 59.102 55.000 0.00 0.00 0.00 5.80
5313 5909 0.247460 GCAATGTCTTTGGAAGGGGC 59.753 55.000 1.08 0.00 35.75 5.80
5314 5910 0.897621 GGCAATGTCTTTGGAAGGGG 59.102 55.000 1.08 0.00 35.75 4.79
5315 5911 1.821136 GAGGCAATGTCTTTGGAAGGG 59.179 52.381 0.00 0.00 35.75 3.95
5316 5912 1.470098 CGAGGCAATGTCTTTGGAAGG 59.530 52.381 0.00 0.00 35.75 3.46
5317 5913 1.470098 CCGAGGCAATGTCTTTGGAAG 59.530 52.381 1.43 0.00 35.75 3.46
5318 5914 1.533625 CCGAGGCAATGTCTTTGGAA 58.466 50.000 1.43 0.00 35.75 3.53
5319 5915 0.322456 CCCGAGGCAATGTCTTTGGA 60.322 55.000 8.40 0.00 35.75 3.53
5320 5916 0.322456 TCCCGAGGCAATGTCTTTGG 60.322 55.000 0.00 0.00 35.75 3.28
5321 5917 0.804989 GTCCCGAGGCAATGTCTTTG 59.195 55.000 0.00 0.00 38.43 2.77
5322 5918 0.322546 GGTCCCGAGGCAATGTCTTT 60.323 55.000 0.00 0.00 0.00 2.52
5323 5919 1.299976 GGTCCCGAGGCAATGTCTT 59.700 57.895 0.00 0.00 0.00 3.01
5324 5920 2.670148 GGGTCCCGAGGCAATGTCT 61.670 63.158 0.00 0.00 0.00 3.41
5325 5921 2.124695 GGGTCCCGAGGCAATGTC 60.125 66.667 0.00 0.00 0.00 3.06
5326 5922 2.231380 AAGGGTCCCGAGGCAATGT 61.231 57.895 0.99 0.00 0.00 2.71
5327 5923 1.750399 CAAGGGTCCCGAGGCAATG 60.750 63.158 0.99 0.00 0.00 2.82
5328 5924 2.677228 CAAGGGTCCCGAGGCAAT 59.323 61.111 0.99 0.00 0.00 3.56
5329 5925 4.344865 GCAAGGGTCCCGAGGCAA 62.345 66.667 14.38 0.00 0.00 4.52
5331 5927 2.056906 ATATGCAAGGGTCCCGAGGC 62.057 60.000 12.88 12.88 0.00 4.70
5332 5928 0.250467 CATATGCAAGGGTCCCGAGG 60.250 60.000 0.99 0.00 0.00 4.63
5333 5929 0.250467 CCATATGCAAGGGTCCCGAG 60.250 60.000 0.99 0.00 0.00 4.63
5334 5930 0.692756 TCCATATGCAAGGGTCCCGA 60.693 55.000 0.99 0.00 0.00 5.14
5335 5931 0.401738 ATCCATATGCAAGGGTCCCG 59.598 55.000 0.99 0.00 0.00 5.14
5336 5932 2.108952 AGAATCCATATGCAAGGGTCCC 59.891 50.000 0.00 0.00 0.00 4.46
5337 5933 3.515602 AGAATCCATATGCAAGGGTCC 57.484 47.619 0.00 0.00 0.00 4.46
5338 5934 5.859205 AAAAGAATCCATATGCAAGGGTC 57.141 39.130 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.