Multiple sequence alignment - TraesCS2D01G156400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G156400 chr2D 100.000 2600 0 0 1 2600 99702625 99705224 0.000000e+00 4802.0
1 TraesCS2D01G156400 chr2D 87.728 823 82 12 938 1754 99683306 99684115 0.000000e+00 942.0
2 TraesCS2D01G156400 chr2D 82.430 535 86 6 1074 1605 99572742 99573271 6.560000e-126 460.0
3 TraesCS2D01G156400 chr2D 84.433 379 38 9 2240 2597 324174719 324174341 1.140000e-93 353.0
4 TraesCS2D01G156400 chr2D 84.127 378 37 6 2245 2600 23668485 23668109 6.890000e-91 344.0
5 TraesCS2D01G156400 chr2D 95.767 189 8 0 624 812 575519118 575518930 3.250000e-79 305.0
6 TraesCS2D01G156400 chr2D 80.543 221 27 9 1538 1750 99720800 99721012 3.460000e-34 156.0
7 TraesCS2D01G156400 chr2D 92.500 40 2 1 2200 2239 99704757 99704795 3.610000e-04 56.5
8 TraesCS2D01G156400 chr2D 92.500 40 2 1 2133 2171 99704824 99704863 3.610000e-04 56.5
9 TraesCS2D01G156400 chr2A 90.347 1181 56 25 812 1947 98902895 98904062 0.000000e+00 1496.0
10 TraesCS2D01G156400 chr2A 88.116 791 74 12 970 1750 98907942 98908722 0.000000e+00 922.0
11 TraesCS2D01G156400 chr2A 82.863 531 87 4 1070 1598 19914005 19914533 8.420000e-130 473.0
12 TraesCS2D01G156400 chr2A 82.584 534 87 4 1074 1605 98578842 98579371 1.410000e-127 466.0
13 TraesCS2D01G156400 chr2A 94.218 294 15 2 3 294 98902177 98902470 5.100000e-122 448.0
14 TraesCS2D01G156400 chr2A 93.455 275 12 3 283 552 98902502 98902775 1.120000e-108 403.0
15 TraesCS2D01G156400 chr2A 93.229 192 12 1 622 813 16732148 16731958 5.480000e-72 281.0
16 TraesCS2D01G156400 chr2B 91.118 957 53 8 965 1901 150948618 150947674 0.000000e+00 1267.0
17 TraesCS2D01G156400 chr2B 88.269 520 48 7 1237 1754 150985236 150984728 6.150000e-171 610.0
18 TraesCS2D01G156400 chr2B 80.976 615 100 13 1000 1605 151485824 151485218 3.030000e-129 472.0
19 TraesCS2D01G156400 chr2B 91.554 296 18 3 1 294 150976934 150976644 4.030000e-108 401.0
20 TraesCS2D01G156400 chr2B 83.380 355 55 4 2247 2599 199577426 199577778 2.500000e-85 326.0
21 TraesCS2D01G156400 chr2B 82.415 381 43 10 2240 2598 577451475 577451853 6.990000e-81 311.0
22 TraesCS2D01G156400 chr2B 86.765 272 24 6 283 550 150976612 150976349 2.530000e-75 292.0
23 TraesCS2D01G156400 chr2B 84.100 239 21 8 1893 2120 150944332 150944100 5.640000e-52 215.0
24 TraesCS2D01G156400 chr2B 92.143 140 9 1 812 951 150976239 150976102 2.040000e-46 196.0
25 TraesCS2D01G156400 chr2B 85.714 98 5 3 1858 1953 150942596 150942506 7.660000e-16 95.3
26 TraesCS2D01G156400 chr2B 77.922 154 17 6 1722 1859 150943128 150942976 2.140000e-11 80.5
27 TraesCS2D01G156400 chr2B 94.000 50 0 1 575 624 150976295 150976249 3.590000e-09 73.1
28 TraesCS2D01G156400 chr5B 85.515 359 50 2 2243 2600 214571725 214571368 8.790000e-100 374.0
29 TraesCS2D01G156400 chr5B 79.737 380 56 7 2240 2598 568386348 568385969 3.320000e-64 255.0
30 TraesCS2D01G156400 chr4D 84.697 379 35 5 2240 2596 334851150 334851527 8.850000e-95 357.0
31 TraesCS2D01G156400 chr4D 84.273 337 31 9 2285 2600 391122191 391121856 2.510000e-80 309.0
32 TraesCS2D01G156400 chr3D 84.680 359 53 2 2240 2597 342695819 342695462 8.850000e-95 357.0
33 TraesCS2D01G156400 chr3D 96.354 192 7 0 621 812 212408877 212409068 1.500000e-82 316.0
34 TraesCS2D01G156400 chr3D 94.241 191 11 0 622 812 378782679 378782489 2.530000e-75 292.0
35 TraesCS2D01G156400 chr7D 83.812 383 39 8 2239 2600 139254886 139254506 2.480000e-90 342.0
36 TraesCS2D01G156400 chr7D 94.709 189 10 0 624 812 7524410 7524598 7.040000e-76 294.0
37 TraesCS2D01G156400 chr6B 83.636 385 38 7 2238 2600 658617862 658618243 3.200000e-89 339.0
38 TraesCS2D01G156400 chr5D 96.354 192 7 0 621 812 528561260 528561451 1.500000e-82 316.0
39 TraesCS2D01G156400 chr5D 95.000 200 10 0 613 812 536384626 536384825 5.400000e-82 315.0
40 TraesCS2D01G156400 chr5D 92.821 195 14 0 618 812 35489836 35490030 1.520000e-72 283.0
41 TraesCS2D01G156400 chr1D 82.415 381 44 12 2240 2598 101948949 101948570 6.990000e-81 311.0
42 TraesCS2D01G156400 chr1D 82.173 359 55 9 2247 2600 313991873 313992227 1.510000e-77 300.0
43 TraesCS2D01G156400 chr4B 81.698 377 45 9 2240 2595 571062725 571062352 2.530000e-75 292.0
44 TraesCS2D01G156400 chr6D 94.180 189 10 1 621 809 60511661 60511848 1.180000e-73 287.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G156400 chr2D 99702625 99705224 2599 False 1638.333333 4802 95.0000 1 2600 3 chr2D.!!$F4 2599
1 TraesCS2D01G156400 chr2D 99683306 99684115 809 False 942.000000 942 87.7280 938 1754 1 chr2D.!!$F2 816
2 TraesCS2D01G156400 chr2D 99572742 99573271 529 False 460.000000 460 82.4300 1074 1605 1 chr2D.!!$F1 531
3 TraesCS2D01G156400 chr2A 98902177 98908722 6545 False 817.250000 1496 91.5340 3 1947 4 chr2A.!!$F3 1944
4 TraesCS2D01G156400 chr2A 19914005 19914533 528 False 473.000000 473 82.8630 1070 1598 1 chr2A.!!$F1 528
5 TraesCS2D01G156400 chr2A 98578842 98579371 529 False 466.000000 466 82.5840 1074 1605 1 chr2A.!!$F2 531
6 TraesCS2D01G156400 chr2B 150984728 150985236 508 True 610.000000 610 88.2690 1237 1754 1 chr2B.!!$R1 517
7 TraesCS2D01G156400 chr2B 151485218 151485824 606 True 472.000000 472 80.9760 1000 1605 1 chr2B.!!$R2 605
8 TraesCS2D01G156400 chr2B 150942506 150948618 6112 True 414.450000 1267 84.7135 965 2120 4 chr2B.!!$R3 1155
9 TraesCS2D01G156400 chr2B 150976102 150976934 832 True 240.525000 401 91.1155 1 951 4 chr2B.!!$R4 950

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
315 362 0.250513 GGCCAACTACACCTCTCCTG 59.749 60.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 10321 0.108186 TGTTGCATCTCGTAGGCCTG 60.108 55.0 17.99 0.0 32.61 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 108 7.477144 TTGAATGCTATATACCTTCGTGTTG 57.523 36.000 0.00 0.00 0.00 3.33
309 356 0.251922 TACCGAGGCCAACTACACCT 60.252 55.000 5.01 0.00 36.19 4.00
315 362 0.250513 GGCCAACTACACCTCTCCTG 59.749 60.000 0.00 0.00 0.00 3.86
330 377 2.707257 TCTCCTGCCATTCATATGCTCA 59.293 45.455 0.00 0.00 0.00 4.26
338 385 4.648651 CCATTCATATGCTCATGTCTCCA 58.351 43.478 0.00 0.00 0.00 3.86
554 607 3.020058 GCACGTTGCAACAAAACTTTC 57.980 42.857 28.01 5.31 44.26 2.62
555 608 2.666022 GCACGTTGCAACAAAACTTTCT 59.334 40.909 28.01 0.00 44.26 2.52
556 609 3.481789 GCACGTTGCAACAAAACTTTCTG 60.482 43.478 28.01 10.79 44.26 3.02
557 610 2.666022 ACGTTGCAACAAAACTTTCTGC 59.334 40.909 28.01 0.00 0.00 4.26
558 611 2.923020 CGTTGCAACAAAACTTTCTGCT 59.077 40.909 28.01 0.00 34.10 4.24
592 683 1.001378 GCGCTCAACCAATCAACTTGT 60.001 47.619 0.00 0.00 32.61 3.16
593 684 2.653890 CGCTCAACCAATCAACTTGTG 58.346 47.619 0.00 0.00 32.61 3.33
594 685 2.033299 CGCTCAACCAATCAACTTGTGT 59.967 45.455 0.00 0.00 32.61 3.72
624 718 1.209504 TCTCCGGCCAATTCCACTTAG 59.790 52.381 2.24 0.00 0.00 2.18
625 719 0.254747 TCCGGCCAATTCCACTTAGG 59.745 55.000 2.24 0.00 39.47 2.69
628 722 3.596362 GCCAATTCCACTTAGGCCT 57.404 52.632 11.78 11.78 39.42 5.19
629 723 1.852633 GCCAATTCCACTTAGGCCTT 58.147 50.000 12.58 0.00 39.42 4.35
630 724 1.478105 GCCAATTCCACTTAGGCCTTG 59.522 52.381 12.58 7.32 39.42 3.61
631 725 2.807676 CCAATTCCACTTAGGCCTTGT 58.192 47.619 12.58 8.10 37.29 3.16
633 727 3.694566 CCAATTCCACTTAGGCCTTGTAC 59.305 47.826 12.58 0.00 37.29 2.90
634 728 4.331968 CAATTCCACTTAGGCCTTGTACA 58.668 43.478 12.58 0.00 37.29 2.90
635 729 4.650972 ATTCCACTTAGGCCTTGTACAA 57.349 40.909 12.58 8.28 37.29 2.41
636 730 4.650972 TTCCACTTAGGCCTTGTACAAT 57.349 40.909 12.58 0.00 37.29 2.71
637 731 3.950397 TCCACTTAGGCCTTGTACAATG 58.050 45.455 12.58 7.68 37.29 2.82
638 732 3.585289 TCCACTTAGGCCTTGTACAATGA 59.415 43.478 12.58 0.00 37.29 2.57
639 733 3.941483 CCACTTAGGCCTTGTACAATGAG 59.059 47.826 12.58 6.19 0.00 2.90
640 734 4.323485 CCACTTAGGCCTTGTACAATGAGA 60.323 45.833 12.58 0.00 0.00 3.27
641 735 4.872691 CACTTAGGCCTTGTACAATGAGAG 59.127 45.833 12.58 8.21 0.00 3.20
642 736 4.777896 ACTTAGGCCTTGTACAATGAGAGA 59.222 41.667 12.58 0.00 0.00 3.10
643 737 5.426833 ACTTAGGCCTTGTACAATGAGAGAT 59.573 40.000 12.58 0.00 0.00 2.75
644 738 4.148128 AGGCCTTGTACAATGAGAGATG 57.852 45.455 14.26 0.00 0.00 2.90
645 739 2.615912 GGCCTTGTACAATGAGAGATGC 59.384 50.000 14.26 5.37 0.00 3.91
646 740 3.539604 GCCTTGTACAATGAGAGATGCT 58.460 45.455 14.26 0.00 0.00 3.79
647 741 3.944015 GCCTTGTACAATGAGAGATGCTT 59.056 43.478 14.26 0.00 0.00 3.91
648 742 5.118990 GCCTTGTACAATGAGAGATGCTTA 58.881 41.667 14.26 0.00 0.00 3.09
649 743 5.762218 GCCTTGTACAATGAGAGATGCTTAT 59.238 40.000 14.26 0.00 0.00 1.73
650 744 6.293298 GCCTTGTACAATGAGAGATGCTTATG 60.293 42.308 14.26 0.00 0.00 1.90
651 745 6.988580 CCTTGTACAATGAGAGATGCTTATGA 59.011 38.462 9.13 0.00 0.00 2.15
652 746 7.496920 CCTTGTACAATGAGAGATGCTTATGAA 59.503 37.037 9.13 0.00 0.00 2.57
653 747 8.429493 TTGTACAATGAGAGATGCTTATGAAG 57.571 34.615 3.59 0.00 0.00 3.02
654 748 6.988580 TGTACAATGAGAGATGCTTATGAAGG 59.011 38.462 0.00 0.00 0.00 3.46
655 749 5.999044 ACAATGAGAGATGCTTATGAAGGT 58.001 37.500 0.00 0.00 0.00 3.50
656 750 5.821470 ACAATGAGAGATGCTTATGAAGGTG 59.179 40.000 0.00 0.00 0.00 4.00
657 751 3.801698 TGAGAGATGCTTATGAAGGTGC 58.198 45.455 0.00 0.00 0.00 5.01
658 752 3.453717 TGAGAGATGCTTATGAAGGTGCT 59.546 43.478 0.00 0.00 0.00 4.40
659 753 4.080695 TGAGAGATGCTTATGAAGGTGCTT 60.081 41.667 0.00 0.00 0.00 3.91
660 754 5.129320 TGAGAGATGCTTATGAAGGTGCTTA 59.871 40.000 0.00 0.00 0.00 3.09
661 755 5.609423 AGAGATGCTTATGAAGGTGCTTAG 58.391 41.667 0.00 0.00 0.00 2.18
662 756 5.365025 AGAGATGCTTATGAAGGTGCTTAGA 59.635 40.000 0.00 0.00 0.00 2.10
663 757 5.994250 AGATGCTTATGAAGGTGCTTAGAA 58.006 37.500 0.00 0.00 0.00 2.10
664 758 6.418101 AGATGCTTATGAAGGTGCTTAGAAA 58.582 36.000 0.00 0.00 0.00 2.52
665 759 6.886459 AGATGCTTATGAAGGTGCTTAGAAAA 59.114 34.615 0.00 0.00 0.00 2.29
666 760 6.892658 TGCTTATGAAGGTGCTTAGAAAAA 57.107 33.333 0.00 0.00 0.00 1.94
667 761 7.466746 TGCTTATGAAGGTGCTTAGAAAAAT 57.533 32.000 0.00 0.00 0.00 1.82
668 762 8.574251 TGCTTATGAAGGTGCTTAGAAAAATA 57.426 30.769 0.00 0.00 0.00 1.40
669 763 9.019656 TGCTTATGAAGGTGCTTAGAAAAATAA 57.980 29.630 0.00 0.00 0.00 1.40
670 764 9.855021 GCTTATGAAGGTGCTTAGAAAAATAAA 57.145 29.630 0.00 0.00 0.00 1.40
673 767 6.674066 TGAAGGTGCTTAGAAAAATAAACCG 58.326 36.000 0.00 0.00 0.00 4.44
674 768 5.638596 AGGTGCTTAGAAAAATAAACCGG 57.361 39.130 0.00 0.00 0.00 5.28
675 769 4.461431 AGGTGCTTAGAAAAATAAACCGGG 59.539 41.667 6.32 0.00 0.00 5.73
676 770 4.219070 GGTGCTTAGAAAAATAAACCGGGT 59.781 41.667 6.32 0.00 0.00 5.28
677 771 5.279106 GGTGCTTAGAAAAATAAACCGGGTT 60.279 40.000 10.96 10.96 0.00 4.11
678 772 6.218019 GTGCTTAGAAAAATAAACCGGGTTT 58.782 36.000 26.79 26.79 39.24 3.27
679 773 7.369607 GTGCTTAGAAAAATAAACCGGGTTTA 58.630 34.615 29.02 29.02 41.32 2.01
680 774 8.030692 GTGCTTAGAAAAATAAACCGGGTTTAT 58.969 33.333 30.45 30.45 46.52 1.40
681 775 8.245491 TGCTTAGAAAAATAAACCGGGTTTATC 58.755 33.333 33.85 25.42 44.65 1.75
682 776 8.464404 GCTTAGAAAAATAAACCGGGTTTATCT 58.536 33.333 33.85 29.20 44.65 1.98
683 777 9.783256 CTTAGAAAAATAAACCGGGTTTATCTG 57.217 33.333 33.85 18.47 44.65 2.90
684 778 9.517868 TTAGAAAAATAAACCGGGTTTATCTGA 57.482 29.630 33.85 24.27 44.65 3.27
685 779 8.411991 AGAAAAATAAACCGGGTTTATCTGAA 57.588 30.769 33.85 16.81 44.65 3.02
686 780 8.520351 AGAAAAATAAACCGGGTTTATCTGAAG 58.480 33.333 33.85 0.00 44.65 3.02
687 781 5.830000 AATAAACCGGGTTTATCTGAAGC 57.170 39.130 33.85 0.00 44.65 3.86
688 782 2.871096 AACCGGGTTTATCTGAAGCA 57.129 45.000 6.59 0.00 0.00 3.91
689 783 2.109425 ACCGGGTTTATCTGAAGCAC 57.891 50.000 6.32 0.00 0.00 4.40
690 784 1.339727 ACCGGGTTTATCTGAAGCACC 60.340 52.381 6.32 0.00 0.00 5.01
691 785 1.006832 CGGGTTTATCTGAAGCACCG 58.993 55.000 0.00 0.00 0.00 4.94
692 786 1.379527 GGGTTTATCTGAAGCACCGG 58.620 55.000 0.00 0.00 0.00 5.28
693 787 0.733150 GGTTTATCTGAAGCACCGGC 59.267 55.000 0.00 0.00 41.61 6.13
703 797 2.407616 GCACCGGCGCCTATTTTC 59.592 61.111 26.68 4.65 0.00 2.29
704 798 2.403378 GCACCGGCGCCTATTTTCA 61.403 57.895 26.68 0.00 0.00 2.69
705 799 1.724582 GCACCGGCGCCTATTTTCAT 61.725 55.000 26.68 0.00 0.00 2.57
706 800 1.588674 CACCGGCGCCTATTTTCATA 58.411 50.000 26.68 0.00 0.00 2.15
707 801 1.531149 CACCGGCGCCTATTTTCATAG 59.469 52.381 26.68 4.04 33.21 2.23
721 815 5.916661 TTTTCATAGGAGAGACGCTTAGT 57.083 39.130 0.00 0.00 0.00 2.24
722 816 5.916661 TTTCATAGGAGAGACGCTTAGTT 57.083 39.130 0.00 0.00 0.00 2.24
723 817 7.400599 TTTTCATAGGAGAGACGCTTAGTTA 57.599 36.000 0.00 0.00 0.00 2.24
724 818 7.400599 TTTCATAGGAGAGACGCTTAGTTAA 57.599 36.000 0.00 0.00 0.00 2.01
725 819 6.621316 TCATAGGAGAGACGCTTAGTTAAG 57.379 41.667 0.00 0.00 36.40 1.85
740 834 7.502120 CTTAGTTAAGCGTCTACCCTATACA 57.498 40.000 0.00 0.00 0.00 2.29
741 835 7.880160 TTAGTTAAGCGTCTACCCTATACAA 57.120 36.000 0.00 0.00 0.00 2.41
742 836 6.780457 AGTTAAGCGTCTACCCTATACAAA 57.220 37.500 0.00 0.00 0.00 2.83
743 837 7.357429 AGTTAAGCGTCTACCCTATACAAAT 57.643 36.000 0.00 0.00 0.00 2.32
744 838 8.469309 AGTTAAGCGTCTACCCTATACAAATA 57.531 34.615 0.00 0.00 0.00 1.40
745 839 8.917088 AGTTAAGCGTCTACCCTATACAAATAA 58.083 33.333 0.00 0.00 0.00 1.40
746 840 9.189723 GTTAAGCGTCTACCCTATACAAATAAG 57.810 37.037 0.00 0.00 0.00 1.73
747 841 5.780984 AGCGTCTACCCTATACAAATAAGC 58.219 41.667 0.00 0.00 0.00 3.09
748 842 5.303589 AGCGTCTACCCTATACAAATAAGCA 59.696 40.000 0.00 0.00 0.00 3.91
749 843 5.404667 GCGTCTACCCTATACAAATAAGCAC 59.595 44.000 0.00 0.00 0.00 4.40
750 844 5.924825 CGTCTACCCTATACAAATAAGCACC 59.075 44.000 0.00 0.00 0.00 5.01
751 845 5.924825 GTCTACCCTATACAAATAAGCACCG 59.075 44.000 0.00 0.00 0.00 4.94
752 846 4.081322 ACCCTATACAAATAAGCACCGG 57.919 45.455 0.00 0.00 0.00 5.28
753 847 3.457012 ACCCTATACAAATAAGCACCGGT 59.543 43.478 0.00 0.00 0.00 5.28
754 848 3.813166 CCCTATACAAATAAGCACCGGTG 59.187 47.826 30.66 30.66 0.00 4.94
768 862 4.766404 CACCGGTGCTTAAGAAAATCTT 57.234 40.909 24.02 0.00 40.35 2.40
769 863 4.475944 CACCGGTGCTTAAGAAAATCTTG 58.524 43.478 24.02 0.00 37.29 3.02
770 864 3.506067 ACCGGTGCTTAAGAAAATCTTGG 59.494 43.478 6.12 0.00 37.29 3.61
771 865 3.506067 CCGGTGCTTAAGAAAATCTTGGT 59.494 43.478 6.67 0.00 37.29 3.67
772 866 4.022329 CCGGTGCTTAAGAAAATCTTGGTT 60.022 41.667 6.67 0.00 37.29 3.67
773 867 5.508994 CCGGTGCTTAAGAAAATCTTGGTTT 60.509 40.000 6.67 0.00 37.29 3.27
774 868 6.294286 CCGGTGCTTAAGAAAATCTTGGTTTA 60.294 38.462 6.67 0.00 37.29 2.01
775 869 7.312899 CGGTGCTTAAGAAAATCTTGGTTTAT 58.687 34.615 6.67 0.00 37.29 1.40
776 870 7.812669 CGGTGCTTAAGAAAATCTTGGTTTATT 59.187 33.333 6.67 0.00 37.29 1.40
777 871 9.489084 GGTGCTTAAGAAAATCTTGGTTTATTT 57.511 29.630 6.67 0.00 37.29 1.40
791 885 9.520515 TCTTGGTTTATTTCTTTAAGCATCTCT 57.479 29.630 0.00 0.00 0.00 3.10
792 886 9.780413 CTTGGTTTATTTCTTTAAGCATCTCTC 57.220 33.333 0.00 0.00 0.00 3.20
793 887 8.281212 TGGTTTATTTCTTTAAGCATCTCTCC 57.719 34.615 0.00 0.00 0.00 3.71
794 888 8.109634 TGGTTTATTTCTTTAAGCATCTCTCCT 58.890 33.333 0.00 0.00 0.00 3.69
795 889 9.614792 GGTTTATTTCTTTAAGCATCTCTCCTA 57.385 33.333 0.00 0.00 0.00 2.94
798 892 7.800155 ATTTCTTTAAGCATCTCTCCTAAGC 57.200 36.000 0.00 0.00 0.00 3.09
799 893 5.939764 TCTTTAAGCATCTCTCCTAAGCA 57.060 39.130 0.00 0.00 0.00 3.91
800 894 5.665459 TCTTTAAGCATCTCTCCTAAGCAC 58.335 41.667 0.00 0.00 0.00 4.40
801 895 2.998316 AAGCATCTCTCCTAAGCACC 57.002 50.000 0.00 0.00 0.00 5.01
802 896 2.173126 AGCATCTCTCCTAAGCACCT 57.827 50.000 0.00 0.00 0.00 4.00
803 897 2.038659 AGCATCTCTCCTAAGCACCTC 58.961 52.381 0.00 0.00 0.00 3.85
804 898 1.069978 GCATCTCTCCTAAGCACCTCC 59.930 57.143 0.00 0.00 0.00 4.30
805 899 1.691434 CATCTCTCCTAAGCACCTCCC 59.309 57.143 0.00 0.00 0.00 4.30
806 900 0.710588 TCTCTCCTAAGCACCTCCCA 59.289 55.000 0.00 0.00 0.00 4.37
807 901 1.292242 TCTCTCCTAAGCACCTCCCAT 59.708 52.381 0.00 0.00 0.00 4.00
808 902 2.122768 CTCTCCTAAGCACCTCCCATT 58.877 52.381 0.00 0.00 0.00 3.16
809 903 1.839994 TCTCCTAAGCACCTCCCATTG 59.160 52.381 0.00 0.00 0.00 2.82
810 904 1.561542 CTCCTAAGCACCTCCCATTGT 59.438 52.381 0.00 0.00 0.00 2.71
952 1046 3.958704 AGATTGTCGATAGTGCTCTTCG 58.041 45.455 11.55 11.55 37.40 3.79
993 1087 0.952984 GCTCAGTGAGGGTTGCACTC 60.953 60.000 21.54 0.00 44.28 3.51
1175 1291 3.191669 TCTACAACGGTGTCAACAACAG 58.808 45.455 10.72 0.00 38.97 3.16
1389 6402 1.215647 CGGGTGGTTCTCCTTCTCG 59.784 63.158 0.00 0.00 34.23 4.04
1412 6425 2.290367 TCGTGTTCAACTCAAAGGCATG 59.710 45.455 0.00 0.00 0.00 4.06
1542 6555 4.953868 CACACCGACGCCACCGAA 62.954 66.667 0.00 0.00 38.29 4.30
1598 6611 2.159128 AGCTCTACGAGTGCTACGTCTA 60.159 50.000 0.00 0.00 42.55 2.59
1695 6715 5.392767 TGGTGCTGTTGTTTTTCTTTGTA 57.607 34.783 0.00 0.00 0.00 2.41
1698 6718 5.234116 GGTGCTGTTGTTTTTCTTTGTATGG 59.766 40.000 0.00 0.00 0.00 2.74
1769 6789 4.730600 TGATTCGATGTGAGTTGTTGTG 57.269 40.909 0.00 0.00 0.00 3.33
1770 6790 4.126437 TGATTCGATGTGAGTTGTTGTGT 58.874 39.130 0.00 0.00 0.00 3.72
1772 6792 3.942539 TCGATGTGAGTTGTTGTGTTG 57.057 42.857 0.00 0.00 0.00 3.33
1773 6793 3.266636 TCGATGTGAGTTGTTGTGTTGT 58.733 40.909 0.00 0.00 0.00 3.32
1775 6795 3.785521 CGATGTGAGTTGTTGTGTTGTTG 59.214 43.478 0.00 0.00 0.00 3.33
1786 6817 7.330700 AGTTGTTGTGTTGTTGTTAATTCTTGG 59.669 33.333 0.00 0.00 0.00 3.61
1796 6827 3.132646 TGTTAATTCTTGGATGCATGGGC 59.867 43.478 2.46 0.00 41.68 5.36
1815 6846 3.931468 GGGCATCTCGATTCTGTATCATG 59.069 47.826 0.00 0.00 32.45 3.07
1816 6847 4.562347 GGGCATCTCGATTCTGTATCATGT 60.562 45.833 0.00 0.00 32.45 3.21
1819 6850 5.118357 GCATCTCGATTCTGTATCATGTGAC 59.882 44.000 0.00 0.00 32.45 3.67
1873 6913 7.436933 TGTTTATGCATGTTTGATGTACCAAA 58.563 30.769 10.16 0.00 34.03 3.28
1886 6926 7.381766 TGATGTACCAAACTGATGAGAAATG 57.618 36.000 0.00 0.00 0.00 2.32
1887 6927 5.627499 TGTACCAAACTGATGAGAAATGC 57.373 39.130 0.00 0.00 0.00 3.56
1891 6931 3.379372 CCAAACTGATGAGAAATGCGGAT 59.621 43.478 0.00 0.00 0.00 4.18
1928 10321 7.515586 ACTACAAATACTCCCCCTTAATTAGC 58.484 38.462 0.00 0.00 0.00 3.09
1936 10329 2.224793 CCCCCTTAATTAGCAGGCCTAC 60.225 54.545 3.98 0.00 0.00 3.18
1937 10330 2.550208 CCCCTTAATTAGCAGGCCTACG 60.550 54.545 3.98 0.00 0.00 3.51
1943 10336 0.389391 TTAGCAGGCCTACGAGATGC 59.611 55.000 3.98 3.24 37.15 3.91
1944 10337 0.755327 TAGCAGGCCTACGAGATGCA 60.755 55.000 3.98 0.00 39.34 3.96
1945 10338 1.153369 GCAGGCCTACGAGATGCAA 60.153 57.895 3.98 0.00 36.88 4.08
1946 10339 1.432270 GCAGGCCTACGAGATGCAAC 61.432 60.000 3.98 0.00 36.88 4.17
1947 10340 0.108186 CAGGCCTACGAGATGCAACA 60.108 55.000 3.98 0.00 0.00 3.33
1948 10341 0.176680 AGGCCTACGAGATGCAACAG 59.823 55.000 1.29 0.00 0.00 3.16
1949 10342 1.432270 GGCCTACGAGATGCAACAGC 61.432 60.000 0.00 0.00 0.00 4.40
1950 10343 0.460987 GCCTACGAGATGCAACAGCT 60.461 55.000 0.00 0.00 30.65 4.24
1951 10344 1.202417 GCCTACGAGATGCAACAGCTA 60.202 52.381 0.00 0.00 26.98 3.32
1963 10356 2.095768 GCAACAGCTAGACGATGCAAAA 60.096 45.455 8.56 0.00 34.10 2.44
2002 10398 6.758886 CCACTCAAAAGTCTAGCTACATTAGG 59.241 42.308 0.00 0.00 31.71 2.69
2047 10451 5.707242 TTCGTACTAATCAGGCCTATGAG 57.293 43.478 3.98 5.00 31.44 2.90
2048 10452 4.079970 TCGTACTAATCAGGCCTATGAGG 58.920 47.826 3.98 0.00 38.80 3.86
2051 10455 2.975489 ACTAATCAGGCCTATGAGGTGG 59.025 50.000 3.98 0.00 37.80 4.61
2065 10469 2.441375 TGAGGTGGAACAAGATGTGGAA 59.559 45.455 0.00 0.00 44.16 3.53
2072 10476 4.584325 TGGAACAAGATGTGGAAGAAAAGG 59.416 41.667 0.00 0.00 31.92 3.11
2079 10483 6.838401 AGATGTGGAAGAAAAGGGAGATAT 57.162 37.500 0.00 0.00 0.00 1.63
2083 10487 6.973642 TGTGGAAGAAAAGGGAGATATGATT 58.026 36.000 0.00 0.00 0.00 2.57
2192 11225 6.694877 AGATACTAATCAGTAGTTCGTGCA 57.305 37.500 0.00 0.00 40.33 4.57
2205 11238 7.913821 CAGTAGTTCGTGCAAATCTGTAGTATA 59.086 37.037 0.00 0.00 0.00 1.47
2210 11243 8.903723 GTTCGTGCAAATCTGTAGTATAGATAC 58.096 37.037 9.58 4.20 33.92 2.24
2211 11244 8.392372 TCGTGCAAATCTGTAGTATAGATACT 57.608 34.615 9.58 7.34 45.08 2.12
2212 11245 9.498176 TCGTGCAAATCTGTAGTATAGATACTA 57.502 33.333 9.58 5.47 43.06 1.82
2243 11276 7.732996 TGATTGGTTATACTAACTAAGGAGCC 58.267 38.462 2.95 0.00 0.00 4.70
2244 11277 7.567622 TGATTGGTTATACTAACTAAGGAGCCT 59.432 37.037 2.95 0.00 0.00 4.58
2245 11278 7.744678 TTGGTTATACTAACTAAGGAGCCTT 57.255 36.000 7.01 7.01 39.83 4.35
2246 11279 7.744678 TGGTTATACTAACTAAGGAGCCTTT 57.255 36.000 7.14 0.00 37.47 3.11
2247 11280 8.154420 TGGTTATACTAACTAAGGAGCCTTTT 57.846 34.615 7.14 0.00 37.47 2.27
2248 11281 9.270707 TGGTTATACTAACTAAGGAGCCTTTTA 57.729 33.333 7.14 0.67 37.47 1.52
2282 11877 9.465985 TTTAACTTCACCGAAAATATTTTCCAC 57.534 29.630 27.32 10.60 42.66 4.02
2286 11881 7.614192 ACTTCACCGAAAATATTTTCCACCTAT 59.386 33.333 27.32 11.07 42.66 2.57
2288 11883 9.635404 TTCACCGAAAATATTTTCCACCTATAT 57.365 29.630 27.32 8.10 42.66 0.86
2318 11913 8.958119 TTTATCGATAATATCCTGTATTGCCC 57.042 34.615 18.18 0.00 0.00 5.36
2319 11914 5.006153 TCGATAATATCCTGTATTGCCCG 57.994 43.478 0.00 0.00 0.00 6.13
2320 11915 4.707934 TCGATAATATCCTGTATTGCCCGA 59.292 41.667 0.00 0.00 0.00 5.14
2321 11916 5.362717 TCGATAATATCCTGTATTGCCCGAT 59.637 40.000 0.00 0.00 0.00 4.18
2322 11917 6.548251 TCGATAATATCCTGTATTGCCCGATA 59.452 38.462 0.00 0.00 0.00 2.92
2323 11918 7.068962 TCGATAATATCCTGTATTGCCCGATAA 59.931 37.037 0.00 0.00 0.00 1.75
2324 11919 7.709182 CGATAATATCCTGTATTGCCCGATAAA 59.291 37.037 0.00 0.00 0.00 1.40
2325 11920 8.732746 ATAATATCCTGTATTGCCCGATAAAC 57.267 34.615 0.00 0.00 0.00 2.01
2327 11922 4.067972 TCCTGTATTGCCCGATAAACTC 57.932 45.455 0.00 0.00 0.00 3.01
2328 11923 3.139077 CCTGTATTGCCCGATAAACTCC 58.861 50.000 0.00 0.00 0.00 3.85
2329 11924 3.433031 CCTGTATTGCCCGATAAACTCCA 60.433 47.826 0.00 0.00 0.00 3.86
2330 11925 4.196193 CTGTATTGCCCGATAAACTCCAA 58.804 43.478 0.00 0.00 0.00 3.53
2331 11926 4.590918 TGTATTGCCCGATAAACTCCAAA 58.409 39.130 0.00 0.00 0.00 3.28
2333 11928 3.926821 TTGCCCGATAAACTCCAAAAC 57.073 42.857 0.00 0.00 0.00 2.43
2334 11929 2.164338 TGCCCGATAAACTCCAAAACC 58.836 47.619 0.00 0.00 0.00 3.27
2335 11930 1.475280 GCCCGATAAACTCCAAAACCC 59.525 52.381 0.00 0.00 0.00 4.11
2336 11931 2.882643 GCCCGATAAACTCCAAAACCCT 60.883 50.000 0.00 0.00 0.00 4.34
2338 11933 3.442625 CCCGATAAACTCCAAAACCCTTC 59.557 47.826 0.00 0.00 0.00 3.46
2339 11934 3.442625 CCGATAAACTCCAAAACCCTTCC 59.557 47.826 0.00 0.00 0.00 3.46
2340 11935 3.126343 CGATAAACTCCAAAACCCTTCCG 59.874 47.826 0.00 0.00 0.00 4.30
2341 11936 1.699730 AAACTCCAAAACCCTTCCGG 58.300 50.000 0.00 0.00 37.81 5.14
2357 11952 4.296265 GGTGATCCCGAAACGCTT 57.704 55.556 0.00 0.00 0.00 4.68
2359 11954 1.366854 GGTGATCCCGAAACGCTTCC 61.367 60.000 0.00 0.00 0.00 3.46
2360 11955 1.447140 TGATCCCGAAACGCTTCCG 60.447 57.895 0.00 0.00 41.14 4.30
2361 11956 2.125269 ATCCCGAAACGCTTCCGG 60.125 61.111 0.00 0.00 39.22 5.14
2362 11957 2.847435 GATCCCGAAACGCTTCCGGT 62.847 60.000 0.00 0.00 39.22 5.28
2367 11962 4.892002 AAACGCTTCCGGTTCCTT 57.108 50.000 0.00 0.00 41.22 3.36
2370 11965 0.668401 AACGCTTCCGGTTCCTTACG 60.668 55.000 0.00 0.00 39.22 3.18
2373 11968 1.799544 GCTTCCGGTTCCTTACGAAA 58.200 50.000 0.00 0.00 30.39 3.46
2375 11970 2.869237 GCTTCCGGTTCCTTACGAAACT 60.869 50.000 0.00 0.00 35.88 2.66
2376 11971 3.614870 GCTTCCGGTTCCTTACGAAACTA 60.615 47.826 0.00 0.00 35.88 2.24
2378 11973 4.806640 TCCGGTTCCTTACGAAACTATT 57.193 40.909 0.00 0.00 35.88 1.73
2379 11974 4.747810 TCCGGTTCCTTACGAAACTATTC 58.252 43.478 0.00 0.00 35.88 1.75
2380 11975 3.867493 CCGGTTCCTTACGAAACTATTCC 59.133 47.826 0.00 0.00 35.88 3.01
2382 11977 4.328169 CGGTTCCTTACGAAACTATTCCAC 59.672 45.833 0.00 0.00 35.88 4.02
2384 11979 5.702209 GGTTCCTTACGAAACTATTCCACAA 59.298 40.000 0.00 0.00 35.10 3.33
2387 11982 8.938906 GTTCCTTACGAAACTATTCCACAAATA 58.061 33.333 0.00 0.00 31.52 1.40
2388 11983 9.504708 TTCCTTACGAAACTATTCCACAAATAA 57.495 29.630 0.00 0.00 31.52 1.40
2389 11984 9.504708 TCCTTACGAAACTATTCCACAAATAAA 57.495 29.630 0.00 0.00 31.52 1.40
2393 11988 8.575649 ACGAAACTATTCCACAAATAAATCCT 57.424 30.769 0.00 0.00 31.52 3.24
2394 11989 8.674607 ACGAAACTATTCCACAAATAAATCCTC 58.325 33.333 0.00 0.00 31.52 3.71
2396 11991 8.801882 AAACTATTCCACAAATAAATCCTCGA 57.198 30.769 0.00 0.00 29.44 4.04
2400 11995 9.712305 CTATTCCACAAATAAATCCTCGATACT 57.288 33.333 0.00 0.00 29.44 2.12
2402 11997 7.361457 TCCACAAATAAATCCTCGATACTCT 57.639 36.000 0.00 0.00 0.00 3.24
2403 11998 7.434492 TCCACAAATAAATCCTCGATACTCTC 58.566 38.462 0.00 0.00 0.00 3.20
2416 12011 5.327502 CGATACTCTCGTCCTACTAACAC 57.672 47.826 0.00 0.00 42.56 3.32
2417 12012 5.049167 CGATACTCTCGTCCTACTAACACT 58.951 45.833 0.00 0.00 42.56 3.55
2418 12013 5.175491 CGATACTCTCGTCCTACTAACACTC 59.825 48.000 0.00 0.00 42.56 3.51
2419 12014 4.283363 ACTCTCGTCCTACTAACACTCA 57.717 45.455 0.00 0.00 0.00 3.41
2420 12015 4.255301 ACTCTCGTCCTACTAACACTCAG 58.745 47.826 0.00 0.00 0.00 3.35
2421 12016 4.020396 ACTCTCGTCCTACTAACACTCAGA 60.020 45.833 0.00 0.00 0.00 3.27
2422 12017 4.903054 TCTCGTCCTACTAACACTCAGAA 58.097 43.478 0.00 0.00 0.00 3.02
2423 12018 4.936411 TCTCGTCCTACTAACACTCAGAAG 59.064 45.833 0.00 0.00 0.00 2.85
2424 12019 4.903054 TCGTCCTACTAACACTCAGAAGA 58.097 43.478 0.00 0.00 0.00 2.87
2426 12021 5.585445 TCGTCCTACTAACACTCAGAAGATC 59.415 44.000 0.00 0.00 0.00 2.75
2429 12024 7.199766 GTCCTACTAACACTCAGAAGATCATG 58.800 42.308 0.00 0.00 0.00 3.07
2430 12025 7.067615 GTCCTACTAACACTCAGAAGATCATGA 59.932 40.741 0.00 0.00 0.00 3.07
2432 12027 8.420222 CCTACTAACACTCAGAAGATCATGATT 58.580 37.037 10.14 0.00 0.00 2.57
2435 12030 8.200792 ACTAACACTCAGAAGATCATGATTACC 58.799 37.037 10.14 2.10 0.00 2.85
2438 12033 8.311395 ACACTCAGAAGATCATGATTACCTTA 57.689 34.615 10.14 0.00 0.00 2.69
2440 12035 9.258826 CACTCAGAAGATCATGATTACCTTAAG 57.741 37.037 10.14 9.26 0.00 1.85
2441 12036 7.930865 ACTCAGAAGATCATGATTACCTTAAGC 59.069 37.037 10.14 0.00 0.00 3.09
2443 12038 8.489489 TCAGAAGATCATGATTACCTTAAGCTT 58.511 33.333 10.14 3.48 0.00 3.74
2444 12039 8.557864 CAGAAGATCATGATTACCTTAAGCTTG 58.442 37.037 10.14 0.00 32.53 4.01
2445 12040 7.718753 AGAAGATCATGATTACCTTAAGCTTGG 59.281 37.037 10.14 5.11 32.26 3.61
2446 12041 6.302269 AGATCATGATTACCTTAAGCTTGGG 58.698 40.000 10.14 13.53 32.26 4.12
2448 12043 5.437060 TCATGATTACCTTAAGCTTGGGAC 58.563 41.667 21.80 12.48 32.26 4.46
2450 12045 3.053917 TGATTACCTTAAGCTTGGGACCC 60.054 47.826 21.80 2.45 0.00 4.46
2451 12046 2.354261 TACCTTAAGCTTGGGACCCT 57.646 50.000 21.80 6.78 0.00 4.34
2454 12049 4.016962 ACCTTAAGCTTGGGACCCTATA 57.983 45.455 21.80 0.00 0.00 1.31
2456 12051 4.412528 ACCTTAAGCTTGGGACCCTATAAG 59.587 45.833 21.80 8.41 0.00 1.73
2457 12052 4.412528 CCTTAAGCTTGGGACCCTATAAGT 59.587 45.833 13.00 0.00 0.00 2.24
2458 12053 5.104067 CCTTAAGCTTGGGACCCTATAAGTT 60.104 44.000 13.00 2.17 0.00 2.66
2460 12055 2.434702 AGCTTGGGACCCTATAAGTTCG 59.565 50.000 13.00 0.00 0.00 3.95
2461 12056 2.484947 GCTTGGGACCCTATAAGTTCGG 60.485 54.545 13.00 0.00 0.00 4.30
2464 12059 3.992999 TGGGACCCTATAAGTTCGGTAA 58.007 45.455 13.00 0.00 0.00 2.85
2467 12062 5.070847 TGGGACCCTATAAGTTCGGTAAATC 59.929 44.000 13.00 0.00 0.00 2.17
2468 12063 5.070847 GGGACCCTATAAGTTCGGTAAATCA 59.929 44.000 2.09 0.00 0.00 2.57
2469 12064 6.239800 GGGACCCTATAAGTTCGGTAAATCAT 60.240 42.308 2.09 0.00 0.00 2.45
2470 12065 7.038799 GGGACCCTATAAGTTCGGTAAATCATA 60.039 40.741 2.09 0.00 0.00 2.15
2471 12066 8.537858 GGACCCTATAAGTTCGGTAAATCATAT 58.462 37.037 0.00 0.00 0.00 1.78
2481 12076 9.996554 AGTTCGGTAAATCATATACATGAATGA 57.003 29.630 0.00 6.17 44.27 2.57
2491 12086 8.593492 TCATATACATGAATGAAACTCCTTCG 57.407 34.615 0.00 0.00 38.25 3.79
2492 12087 5.741388 ATACATGAATGAAACTCCTTCGC 57.259 39.130 0.00 0.00 36.78 4.70
2494 12089 3.686726 ACATGAATGAAACTCCTTCGCTC 59.313 43.478 0.00 0.00 36.78 5.03
2495 12090 3.401033 TGAATGAAACTCCTTCGCTCA 57.599 42.857 0.00 0.00 36.78 4.26
2496 12091 3.738982 TGAATGAAACTCCTTCGCTCAA 58.261 40.909 0.00 0.00 36.78 3.02
2497 12092 4.326826 TGAATGAAACTCCTTCGCTCAAT 58.673 39.130 0.00 0.00 36.78 2.57
2499 12094 3.401033 TGAAACTCCTTCGCTCAATGA 57.599 42.857 0.00 0.00 36.78 2.57
2502 12097 0.108615 ACTCCTTCGCTCAATGACCG 60.109 55.000 0.00 0.00 0.00 4.79
2504 12099 0.824109 TCCTTCGCTCAATGACCGAT 59.176 50.000 1.22 0.00 0.00 4.18
2505 12100 2.028876 TCCTTCGCTCAATGACCGATA 58.971 47.619 1.22 0.00 0.00 2.92
2506 12101 2.034685 TCCTTCGCTCAATGACCGATAG 59.965 50.000 1.22 3.18 0.00 2.08
2507 12102 1.789464 CTTCGCTCAATGACCGATAGC 59.211 52.381 1.22 0.00 0.00 2.97
2518 12113 2.493030 CGATAGCGGAACCGTGGT 59.507 61.111 14.63 3.11 42.09 4.16
2520 12115 1.588139 GATAGCGGAACCGTGGTCG 60.588 63.158 14.63 0.00 42.09 4.79
2521 12116 2.275547 GATAGCGGAACCGTGGTCGT 62.276 60.000 14.63 0.00 42.09 4.34
2522 12117 2.275547 ATAGCGGAACCGTGGTCGTC 62.276 60.000 14.63 0.00 42.09 4.20
2524 12119 3.980989 CGGAACCGTGGTCGTCCA 61.981 66.667 9.78 0.00 42.05 4.02
2525 12120 2.660802 GGAACCGTGGTCGTCCAT 59.339 61.111 4.29 0.00 46.20 3.41
2526 12121 1.892338 GGAACCGTGGTCGTCCATA 59.108 57.895 4.29 0.00 46.20 2.74
2527 12122 0.462789 GGAACCGTGGTCGTCCATAT 59.537 55.000 4.29 0.00 46.20 1.78
2528 12123 1.537562 GGAACCGTGGTCGTCCATATC 60.538 57.143 4.29 1.62 46.20 1.63
2529 12124 0.101759 AACCGTGGTCGTCCATATCG 59.898 55.000 4.29 3.97 46.20 2.92
2530 12125 0.749091 ACCGTGGTCGTCCATATCGA 60.749 55.000 4.29 0.00 46.20 3.59
2531 12126 0.596577 CCGTGGTCGTCCATATCGAT 59.403 55.000 4.29 2.16 46.20 3.59
2532 12127 1.401148 CCGTGGTCGTCCATATCGATC 60.401 57.143 0.00 0.00 46.20 3.69
2533 12128 1.401148 CGTGGTCGTCCATATCGATCC 60.401 57.143 0.00 0.00 46.20 3.36
2534 12129 1.067776 GTGGTCGTCCATATCGATCCC 60.068 57.143 0.00 0.00 46.20 3.85
2535 12130 1.203013 TGGTCGTCCATATCGATCCCT 60.203 52.381 0.00 0.00 39.03 4.20
2536 12131 2.040679 TGGTCGTCCATATCGATCCCTA 59.959 50.000 0.00 0.00 39.03 3.53
2537 12132 3.288964 GGTCGTCCATATCGATCCCTAT 58.711 50.000 0.00 0.00 39.45 2.57
2538 12133 3.066900 GGTCGTCCATATCGATCCCTATG 59.933 52.174 0.00 0.00 39.45 2.23
2539 12134 3.945921 GTCGTCCATATCGATCCCTATGA 59.054 47.826 0.00 0.00 39.45 2.15
2540 12135 4.580995 GTCGTCCATATCGATCCCTATGAT 59.419 45.833 0.00 0.00 39.45 2.45
2541 12136 5.067936 GTCGTCCATATCGATCCCTATGATT 59.932 44.000 0.00 0.00 39.45 2.57
2542 12137 6.262496 GTCGTCCATATCGATCCCTATGATTA 59.738 42.308 0.00 0.00 39.45 1.75
2543 12138 6.262496 TCGTCCATATCGATCCCTATGATTAC 59.738 42.308 0.00 0.00 32.41 1.89
2544 12139 6.039382 CGTCCATATCGATCCCTATGATTACA 59.961 42.308 0.00 0.00 32.41 2.41
2545 12140 7.255625 CGTCCATATCGATCCCTATGATTACAT 60.256 40.741 0.00 0.00 40.16 2.29
2546 12141 7.869937 GTCCATATCGATCCCTATGATTACATG 59.130 40.741 0.00 0.00 37.87 3.21
2547 12142 7.784550 TCCATATCGATCCCTATGATTACATGA 59.215 37.037 0.00 0.00 37.87 3.07
2548 12143 8.424133 CCATATCGATCCCTATGATTACATGAA 58.576 37.037 0.00 0.00 37.87 2.57
2549 12144 9.993454 CATATCGATCCCTATGATTACATGAAT 57.007 33.333 0.00 0.00 37.87 2.57
2550 12145 9.993454 ATATCGATCCCTATGATTACATGAATG 57.007 33.333 0.00 0.00 37.87 2.67
2551 12146 7.480760 TCGATCCCTATGATTACATGAATGA 57.519 36.000 0.00 0.00 37.87 2.57
2552 12147 8.082672 TCGATCCCTATGATTACATGAATGAT 57.917 34.615 0.00 0.00 37.87 2.45
2553 12148 9.200817 TCGATCCCTATGATTACATGAATGATA 57.799 33.333 0.00 0.00 37.87 2.15
2554 12149 9.993454 CGATCCCTATGATTACATGAATGATAT 57.007 33.333 0.00 0.00 37.87 1.63
2557 12152 9.822185 TCCCTATGATTACATGAATGATATTCG 57.178 33.333 0.00 0.00 37.87 3.34
2558 12153 9.822185 CCCTATGATTACATGAATGATATTCGA 57.178 33.333 0.00 0.00 37.87 3.71
2562 12157 9.933723 ATGATTACATGAATGATATTCGAGTGA 57.066 29.630 0.00 0.00 35.21 3.41
2563 12158 9.762933 TGATTACATGAATGATATTCGAGTGAA 57.237 29.630 0.00 0.00 38.76 3.18
2565 12160 8.940768 TTACATGAATGATATTCGAGTGAACA 57.059 30.769 0.00 0.00 36.81 3.18
2566 12161 9.546428 TTACATGAATGATATTCGAGTGAACAT 57.454 29.630 0.00 0.00 36.81 2.71
2567 12162 8.442632 ACATGAATGATATTCGAGTGAACATT 57.557 30.769 0.00 0.00 36.81 2.71
2568 12163 8.896744 ACATGAATGATATTCGAGTGAACATTT 58.103 29.630 0.00 0.00 36.81 2.32
2569 12164 9.166126 CATGAATGATATTCGAGTGAACATTTG 57.834 33.333 0.00 0.00 36.81 2.32
2570 12165 8.491331 TGAATGATATTCGAGTGAACATTTGA 57.509 30.769 0.00 0.00 36.81 2.69
2571 12166 9.112725 TGAATGATATTCGAGTGAACATTTGAT 57.887 29.630 0.00 0.00 36.81 2.57
2572 12167 9.941664 GAATGATATTCGAGTGAACATTTGATT 57.058 29.630 0.00 0.00 36.81 2.57
2579 12174 7.848223 TCGAGTGAACATTTGATTATCATGT 57.152 32.000 0.00 0.00 0.00 3.21
2580 12175 7.687445 TCGAGTGAACATTTGATTATCATGTG 58.313 34.615 2.67 4.49 0.00 3.21
2581 12176 7.548780 TCGAGTGAACATTTGATTATCATGTGA 59.451 33.333 12.23 0.00 0.00 3.58
2582 12177 8.340443 CGAGTGAACATTTGATTATCATGTGAT 58.660 33.333 12.23 0.68 38.51 3.06
2583 12178 9.447040 GAGTGAACATTTGATTATCATGTGATG 57.553 33.333 12.23 9.32 36.05 3.07
2584 12179 8.963725 AGTGAACATTTGATTATCATGTGATGT 58.036 29.630 12.23 9.79 36.05 3.06
2585 12180 9.577110 GTGAACATTTGATTATCATGTGATGTT 57.423 29.630 17.88 17.88 38.68 2.71
2586 12181 9.791820 TGAACATTTGATTATCATGTGATGTTC 57.208 29.630 25.83 25.83 45.98 3.18
2587 12182 9.241317 GAACATTTGATTATCATGTGATGTTCC 57.759 33.333 24.25 15.65 42.78 3.62
2588 12183 7.719483 ACATTTGATTATCATGTGATGTTCCC 58.281 34.615 12.23 0.00 36.05 3.97
2589 12184 7.562454 ACATTTGATTATCATGTGATGTTCCCT 59.438 33.333 12.23 0.00 36.05 4.20
2590 12185 7.959658 TTTGATTATCATGTGATGTTCCCTT 57.040 32.000 5.78 0.00 36.05 3.95
2591 12186 7.959658 TTGATTATCATGTGATGTTCCCTTT 57.040 32.000 5.78 0.00 36.05 3.11
2592 12187 7.337480 TGATTATCATGTGATGTTCCCTTTG 57.663 36.000 5.78 0.00 36.05 2.77
2593 12188 5.581126 TTATCATGTGATGTTCCCTTTGC 57.419 39.130 5.78 0.00 36.05 3.68
2594 12189 3.159213 TCATGTGATGTTCCCTTTGCT 57.841 42.857 0.00 0.00 0.00 3.91
2595 12190 3.499338 TCATGTGATGTTCCCTTTGCTT 58.501 40.909 0.00 0.00 0.00 3.91
2596 12191 3.507233 TCATGTGATGTTCCCTTTGCTTC 59.493 43.478 0.00 0.00 0.00 3.86
2597 12192 2.942804 TGTGATGTTCCCTTTGCTTCA 58.057 42.857 0.00 0.00 0.00 3.02
2598 12193 2.622942 TGTGATGTTCCCTTTGCTTCAC 59.377 45.455 0.00 0.00 37.62 3.18
2599 12194 1.879380 TGATGTTCCCTTTGCTTCACG 59.121 47.619 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 108 4.756084 ACTGCAGTATTCAGAGCAAAAC 57.244 40.909 20.16 0.00 36.44 2.43
309 356 2.707257 TGAGCATATGAATGGCAGGAGA 59.293 45.455 6.97 0.00 33.38 3.71
315 362 3.439476 GGAGACATGAGCATATGAATGGC 59.561 47.826 6.97 8.87 33.38 4.40
330 377 1.701847 ACAAAGCCTGAGTGGAGACAT 59.298 47.619 0.00 0.00 46.14 3.06
338 385 2.558359 GGTGCATTTACAAAGCCTGAGT 59.442 45.455 0.00 0.00 0.00 3.41
552 605 0.961019 GCATGGTTGGTTGAGCAGAA 59.039 50.000 0.00 0.00 0.00 3.02
553 606 1.236616 CGCATGGTTGGTTGAGCAGA 61.237 55.000 0.00 0.00 0.00 4.26
554 607 1.210931 CGCATGGTTGGTTGAGCAG 59.789 57.895 0.00 0.00 0.00 4.24
555 608 2.918345 GCGCATGGTTGGTTGAGCA 61.918 57.895 0.30 0.00 38.36 4.26
556 609 2.126346 GCGCATGGTTGGTTGAGC 60.126 61.111 0.30 0.00 0.00 4.26
557 610 2.176546 CGCGCATGGTTGGTTGAG 59.823 61.111 8.75 0.00 0.00 3.02
558 611 4.036804 GCGCGCATGGTTGGTTGA 62.037 61.111 29.10 0.00 0.00 3.18
592 683 0.036388 GCCGGAGAGTGAAATGGACA 60.036 55.000 5.05 0.00 0.00 4.02
593 684 0.744771 GGCCGGAGAGTGAAATGGAC 60.745 60.000 5.05 0.00 0.00 4.02
594 685 1.198094 TGGCCGGAGAGTGAAATGGA 61.198 55.000 5.05 0.00 0.00 3.41
624 718 2.615912 GCATCTCTCATTGTACAAGGCC 59.384 50.000 15.24 0.00 0.00 5.19
625 719 3.539604 AGCATCTCTCATTGTACAAGGC 58.460 45.455 15.24 2.71 0.00 4.35
627 721 8.429493 TTCATAAGCATCTCTCATTGTACAAG 57.571 34.615 14.65 6.58 0.00 3.16
628 722 7.496920 CCTTCATAAGCATCTCTCATTGTACAA 59.503 37.037 11.41 11.41 0.00 2.41
629 723 6.988580 CCTTCATAAGCATCTCTCATTGTACA 59.011 38.462 0.00 0.00 0.00 2.90
630 724 6.989169 ACCTTCATAAGCATCTCTCATTGTAC 59.011 38.462 0.00 0.00 0.00 2.90
631 725 6.988580 CACCTTCATAAGCATCTCTCATTGTA 59.011 38.462 0.00 0.00 0.00 2.41
633 727 5.277876 GCACCTTCATAAGCATCTCTCATTG 60.278 44.000 0.00 0.00 0.00 2.82
634 728 4.820716 GCACCTTCATAAGCATCTCTCATT 59.179 41.667 0.00 0.00 0.00 2.57
635 729 4.102838 AGCACCTTCATAAGCATCTCTCAT 59.897 41.667 0.00 0.00 0.00 2.90
636 730 3.453717 AGCACCTTCATAAGCATCTCTCA 59.546 43.478 0.00 0.00 0.00 3.27
637 731 4.070630 AGCACCTTCATAAGCATCTCTC 57.929 45.455 0.00 0.00 0.00 3.20
638 732 4.500499 AAGCACCTTCATAAGCATCTCT 57.500 40.909 0.00 0.00 0.00 3.10
639 733 5.605534 TCTAAGCACCTTCATAAGCATCTC 58.394 41.667 0.00 0.00 0.00 2.75
640 734 5.620738 TCTAAGCACCTTCATAAGCATCT 57.379 39.130 0.00 0.00 0.00 2.90
641 735 6.683974 TTTCTAAGCACCTTCATAAGCATC 57.316 37.500 0.00 0.00 0.00 3.91
642 736 7.466746 TTTTTCTAAGCACCTTCATAAGCAT 57.533 32.000 0.00 0.00 0.00 3.79
643 737 6.892658 TTTTTCTAAGCACCTTCATAAGCA 57.107 33.333 0.00 0.00 0.00 3.91
644 738 9.855021 TTTATTTTTCTAAGCACCTTCATAAGC 57.145 29.630 0.00 0.00 0.00 3.09
647 741 8.455682 CGGTTTATTTTTCTAAGCACCTTCATA 58.544 33.333 0.00 0.00 0.00 2.15
648 742 7.312899 CGGTTTATTTTTCTAAGCACCTTCAT 58.687 34.615 0.00 0.00 0.00 2.57
649 743 6.294286 CCGGTTTATTTTTCTAAGCACCTTCA 60.294 38.462 0.00 0.00 0.00 3.02
650 744 6.090783 CCGGTTTATTTTTCTAAGCACCTTC 58.909 40.000 0.00 0.00 0.00 3.46
651 745 5.047590 CCCGGTTTATTTTTCTAAGCACCTT 60.048 40.000 0.00 0.00 0.00 3.50
652 746 4.461431 CCCGGTTTATTTTTCTAAGCACCT 59.539 41.667 0.00 0.00 0.00 4.00
653 747 4.219070 ACCCGGTTTATTTTTCTAAGCACC 59.781 41.667 0.00 0.00 0.00 5.01
654 748 5.381174 ACCCGGTTTATTTTTCTAAGCAC 57.619 39.130 0.00 0.00 0.00 4.40
655 749 6.408107 AAACCCGGTTTATTTTTCTAAGCA 57.592 33.333 14.16 0.00 33.70 3.91
656 750 8.464404 AGATAAACCCGGTTTATTTTTCTAAGC 58.536 33.333 28.51 16.38 45.16 3.09
657 751 9.783256 CAGATAAACCCGGTTTATTTTTCTAAG 57.217 33.333 28.51 12.75 45.16 2.18
658 752 9.517868 TCAGATAAACCCGGTTTATTTTTCTAA 57.482 29.630 28.51 11.90 45.16 2.10
659 753 9.517868 TTCAGATAAACCCGGTTTATTTTTCTA 57.482 29.630 28.51 14.33 45.16 2.10
660 754 8.411991 TTCAGATAAACCCGGTTTATTTTTCT 57.588 30.769 28.51 21.21 45.16 2.52
661 755 7.274904 GCTTCAGATAAACCCGGTTTATTTTTC 59.725 37.037 28.51 19.72 45.16 2.29
662 756 7.094631 GCTTCAGATAAACCCGGTTTATTTTT 58.905 34.615 28.51 17.93 45.16 1.94
663 757 6.209788 TGCTTCAGATAAACCCGGTTTATTTT 59.790 34.615 28.51 19.82 45.16 1.82
664 758 5.712917 TGCTTCAGATAAACCCGGTTTATTT 59.287 36.000 28.51 22.72 45.16 1.40
665 759 5.124936 GTGCTTCAGATAAACCCGGTTTATT 59.875 40.000 28.51 18.53 45.16 1.40
666 760 4.638865 GTGCTTCAGATAAACCCGGTTTAT 59.361 41.667 28.35 28.35 46.97 1.40
667 761 4.004982 GTGCTTCAGATAAACCCGGTTTA 58.995 43.478 22.24 22.24 41.32 2.01
668 762 2.817844 GTGCTTCAGATAAACCCGGTTT 59.182 45.455 19.38 19.38 39.24 3.27
669 763 2.433436 GTGCTTCAGATAAACCCGGTT 58.567 47.619 0.00 0.00 0.00 4.44
670 764 1.339727 GGTGCTTCAGATAAACCCGGT 60.340 52.381 0.00 0.00 0.00 5.28
671 765 1.379527 GGTGCTTCAGATAAACCCGG 58.620 55.000 0.00 0.00 0.00 5.73
672 766 1.006832 CGGTGCTTCAGATAAACCCG 58.993 55.000 0.00 0.00 0.00 5.28
673 767 1.379527 CCGGTGCTTCAGATAAACCC 58.620 55.000 0.00 0.00 0.00 4.11
674 768 0.733150 GCCGGTGCTTCAGATAAACC 59.267 55.000 1.90 0.00 33.53 3.27
675 769 0.373716 CGCCGGTGCTTCAGATAAAC 59.626 55.000 0.00 0.00 34.43 2.01
676 770 1.366111 GCGCCGGTGCTTCAGATAAA 61.366 55.000 32.27 0.00 34.43 1.40
677 771 1.813753 GCGCCGGTGCTTCAGATAA 60.814 57.895 32.27 0.00 34.43 1.75
678 772 2.202878 GCGCCGGTGCTTCAGATA 60.203 61.111 32.27 0.00 34.43 1.98
681 775 3.740128 ATAGGCGCCGGTGCTTCAG 62.740 63.158 36.63 5.56 34.43 3.02
682 776 2.813226 AAATAGGCGCCGGTGCTTCA 62.813 55.000 36.63 22.82 34.43 3.02
683 777 1.654023 AAAATAGGCGCCGGTGCTTC 61.654 55.000 36.63 22.67 34.43 3.86
684 778 1.654023 GAAAATAGGCGCCGGTGCTT 61.654 55.000 36.63 32.58 34.43 3.91
685 779 2.045340 AAAATAGGCGCCGGTGCT 60.045 55.556 36.63 24.87 34.43 4.40
686 780 1.724582 ATGAAAATAGGCGCCGGTGC 61.725 55.000 31.86 31.86 0.00 5.01
687 781 1.531149 CTATGAAAATAGGCGCCGGTG 59.469 52.381 23.20 11.67 0.00 4.94
688 782 1.542547 CCTATGAAAATAGGCGCCGGT 60.543 52.381 23.20 11.27 37.47 5.28
689 783 1.156736 CCTATGAAAATAGGCGCCGG 58.843 55.000 23.20 8.17 37.47 6.13
690 784 2.069273 CTCCTATGAAAATAGGCGCCG 58.931 52.381 23.20 1.65 42.63 6.46
691 785 3.006967 TCTCTCCTATGAAAATAGGCGCC 59.993 47.826 21.89 21.89 42.63 6.53
692 786 3.991121 GTCTCTCCTATGAAAATAGGCGC 59.009 47.826 0.00 0.00 42.63 6.53
693 787 4.230657 CGTCTCTCCTATGAAAATAGGCG 58.769 47.826 6.87 1.78 42.63 5.52
694 788 3.991121 GCGTCTCTCCTATGAAAATAGGC 59.009 47.826 6.87 0.00 42.63 3.93
695 789 5.461032 AGCGTCTCTCCTATGAAAATAGG 57.539 43.478 5.56 5.56 43.93 2.57
696 790 7.653647 ACTAAGCGTCTCTCCTATGAAAATAG 58.346 38.462 0.00 0.00 0.00 1.73
697 791 7.584122 ACTAAGCGTCTCTCCTATGAAAATA 57.416 36.000 0.00 0.00 0.00 1.40
698 792 6.472686 ACTAAGCGTCTCTCCTATGAAAAT 57.527 37.500 0.00 0.00 0.00 1.82
699 793 5.916661 ACTAAGCGTCTCTCCTATGAAAA 57.083 39.130 0.00 0.00 0.00 2.29
700 794 5.916661 AACTAAGCGTCTCTCCTATGAAA 57.083 39.130 0.00 0.00 0.00 2.69
701 795 7.028926 CTTAACTAAGCGTCTCTCCTATGAA 57.971 40.000 0.00 0.00 0.00 2.57
702 796 6.621316 CTTAACTAAGCGTCTCTCCTATGA 57.379 41.667 0.00 0.00 0.00 2.15
716 810 7.502120 TGTATAGGGTAGACGCTTAACTAAG 57.498 40.000 4.43 0.00 39.91 2.18
717 811 7.880160 TTGTATAGGGTAGACGCTTAACTAA 57.120 36.000 4.43 0.47 39.91 2.24
718 812 7.880160 TTTGTATAGGGTAGACGCTTAACTA 57.120 36.000 4.43 0.00 39.91 2.24
719 813 6.780457 TTTGTATAGGGTAGACGCTTAACT 57.220 37.500 4.43 0.00 39.91 2.24
720 814 9.189723 CTTATTTGTATAGGGTAGACGCTTAAC 57.810 37.037 4.43 4.75 39.91 2.01
721 815 7.869429 GCTTATTTGTATAGGGTAGACGCTTAA 59.131 37.037 4.43 0.00 39.91 1.85
722 816 7.014518 TGCTTATTTGTATAGGGTAGACGCTTA 59.985 37.037 4.43 0.00 39.91 3.09
723 817 6.183360 TGCTTATTTGTATAGGGTAGACGCTT 60.183 38.462 4.43 0.00 39.91 4.68
724 818 5.303589 TGCTTATTTGTATAGGGTAGACGCT 59.696 40.000 4.53 4.53 42.15 5.07
725 819 5.404667 GTGCTTATTTGTATAGGGTAGACGC 59.595 44.000 0.00 0.00 0.00 5.19
726 820 5.924825 GGTGCTTATTTGTATAGGGTAGACG 59.075 44.000 0.00 0.00 0.00 4.18
727 821 5.924825 CGGTGCTTATTTGTATAGGGTAGAC 59.075 44.000 0.00 0.00 0.00 2.59
728 822 5.011329 CCGGTGCTTATTTGTATAGGGTAGA 59.989 44.000 0.00 0.00 0.00 2.59
729 823 5.221581 ACCGGTGCTTATTTGTATAGGGTAG 60.222 44.000 6.12 0.00 0.00 3.18
730 824 4.655186 ACCGGTGCTTATTTGTATAGGGTA 59.345 41.667 6.12 0.00 0.00 3.69
731 825 3.457012 ACCGGTGCTTATTTGTATAGGGT 59.543 43.478 6.12 0.00 0.00 4.34
732 826 3.813166 CACCGGTGCTTATTTGTATAGGG 59.187 47.826 24.02 0.00 0.00 3.53
746 840 3.057526 AAGATTTTCTTAAGCACCGGTGC 60.058 43.478 45.27 45.27 45.03 5.01
747 841 4.475944 CAAGATTTTCTTAAGCACCGGTG 58.524 43.478 30.66 30.66 33.78 4.94
748 842 3.506067 CCAAGATTTTCTTAAGCACCGGT 59.494 43.478 0.00 0.00 33.78 5.28
749 843 3.506067 ACCAAGATTTTCTTAAGCACCGG 59.494 43.478 0.00 0.00 33.78 5.28
750 844 4.766404 ACCAAGATTTTCTTAAGCACCG 57.234 40.909 0.00 0.00 33.78 4.94
751 845 9.489084 AAATAAACCAAGATTTTCTTAAGCACC 57.511 29.630 0.00 0.00 33.78 5.01
765 859 9.520515 AGAGATGCTTAAAGAAATAAACCAAGA 57.479 29.630 0.00 0.00 0.00 3.02
766 860 9.780413 GAGAGATGCTTAAAGAAATAAACCAAG 57.220 33.333 0.00 0.00 0.00 3.61
767 861 8.739972 GGAGAGATGCTTAAAGAAATAAACCAA 58.260 33.333 0.00 0.00 0.00 3.67
768 862 8.109634 AGGAGAGATGCTTAAAGAAATAAACCA 58.890 33.333 0.00 0.00 0.00 3.67
769 863 8.512966 AGGAGAGATGCTTAAAGAAATAAACC 57.487 34.615 0.00 0.00 0.00 3.27
772 866 9.331282 GCTTAGGAGAGATGCTTAAAGAAATAA 57.669 33.333 0.00 0.00 0.00 1.40
773 867 8.486210 TGCTTAGGAGAGATGCTTAAAGAAATA 58.514 33.333 0.00 0.00 0.00 1.40
774 868 7.281999 GTGCTTAGGAGAGATGCTTAAAGAAAT 59.718 37.037 0.00 0.00 0.00 2.17
775 869 6.595716 GTGCTTAGGAGAGATGCTTAAAGAAA 59.404 38.462 0.00 0.00 0.00 2.52
776 870 6.109359 GTGCTTAGGAGAGATGCTTAAAGAA 58.891 40.000 0.00 0.00 0.00 2.52
777 871 5.395768 GGTGCTTAGGAGAGATGCTTAAAGA 60.396 44.000 0.00 0.00 0.00 2.52
778 872 4.813697 GGTGCTTAGGAGAGATGCTTAAAG 59.186 45.833 0.00 0.00 0.00 1.85
779 873 4.471386 AGGTGCTTAGGAGAGATGCTTAAA 59.529 41.667 0.00 0.00 0.00 1.52
780 874 4.033709 AGGTGCTTAGGAGAGATGCTTAA 58.966 43.478 0.00 0.00 0.00 1.85
781 875 3.639094 GAGGTGCTTAGGAGAGATGCTTA 59.361 47.826 0.00 0.00 0.00 3.09
782 876 2.433970 GAGGTGCTTAGGAGAGATGCTT 59.566 50.000 0.00 0.00 0.00 3.91
783 877 2.038659 GAGGTGCTTAGGAGAGATGCT 58.961 52.381 0.00 0.00 0.00 3.79
784 878 1.069978 GGAGGTGCTTAGGAGAGATGC 59.930 57.143 0.00 0.00 0.00 3.91
785 879 1.691434 GGGAGGTGCTTAGGAGAGATG 59.309 57.143 0.00 0.00 0.00 2.90
786 880 1.292242 TGGGAGGTGCTTAGGAGAGAT 59.708 52.381 0.00 0.00 0.00 2.75
787 881 0.710588 TGGGAGGTGCTTAGGAGAGA 59.289 55.000 0.00 0.00 0.00 3.10
788 882 1.799933 ATGGGAGGTGCTTAGGAGAG 58.200 55.000 0.00 0.00 0.00 3.20
789 883 1.839994 CAATGGGAGGTGCTTAGGAGA 59.160 52.381 0.00 0.00 0.00 3.71
790 884 1.561542 ACAATGGGAGGTGCTTAGGAG 59.438 52.381 0.00 0.00 0.00 3.69
791 885 1.668826 ACAATGGGAGGTGCTTAGGA 58.331 50.000 0.00 0.00 0.00 2.94
792 886 3.136443 TGATACAATGGGAGGTGCTTAGG 59.864 47.826 0.00 0.00 0.00 2.69
793 887 4.422073 TGATACAATGGGAGGTGCTTAG 57.578 45.455 0.00 0.00 0.00 2.18
794 888 5.513094 GCTATGATACAATGGGAGGTGCTTA 60.513 44.000 0.00 0.00 0.00 3.09
795 889 3.959495 ATGATACAATGGGAGGTGCTT 57.041 42.857 0.00 0.00 0.00 3.91
796 890 3.244700 GCTATGATACAATGGGAGGTGCT 60.245 47.826 0.00 0.00 0.00 4.40
797 891 3.077359 GCTATGATACAATGGGAGGTGC 58.923 50.000 0.00 0.00 0.00 5.01
798 892 4.356405 TGCTATGATACAATGGGAGGTG 57.644 45.455 0.00 0.00 0.00 4.00
799 893 4.323028 CGATGCTATGATACAATGGGAGGT 60.323 45.833 0.00 0.00 0.00 3.85
800 894 4.081476 TCGATGCTATGATACAATGGGAGG 60.081 45.833 0.00 0.00 0.00 4.30
801 895 5.077134 TCGATGCTATGATACAATGGGAG 57.923 43.478 0.00 0.00 0.00 4.30
802 896 5.682234 ATCGATGCTATGATACAATGGGA 57.318 39.130 0.00 0.00 0.00 4.37
803 897 5.295292 GGAATCGATGCTATGATACAATGGG 59.705 44.000 2.72 0.00 0.00 4.00
804 898 6.036844 CAGGAATCGATGCTATGATACAATGG 59.963 42.308 2.72 0.00 0.00 3.16
805 899 6.456584 GCAGGAATCGATGCTATGATACAATG 60.457 42.308 11.86 0.00 39.38 2.82
806 900 5.583854 GCAGGAATCGATGCTATGATACAAT 59.416 40.000 11.86 0.00 39.38 2.71
807 901 4.931601 GCAGGAATCGATGCTATGATACAA 59.068 41.667 11.86 0.00 39.38 2.41
808 902 4.498241 GCAGGAATCGATGCTATGATACA 58.502 43.478 11.86 0.00 39.38 2.29
935 1029 0.100682 GCCGAAGAGCACTATCGACA 59.899 55.000 13.92 0.00 38.82 4.35
952 1046 4.273724 GCTTAAGTTACCAATGAGCTAGCC 59.726 45.833 12.13 3.49 0.00 3.93
993 1087 2.137523 GTGAGGCCTTGCATTTTTGTG 58.862 47.619 6.77 0.00 0.00 3.33
1200 1316 3.692406 AGGTCCGTCGGCTTGGTC 61.692 66.667 6.34 0.00 0.00 4.02
1389 6402 1.334149 GCCTTTGAGTTGAACACGAGC 60.334 52.381 0.00 0.00 0.00 5.03
1454 6467 1.615107 GGAAAAGTCACGCGTCTCCG 61.615 60.000 9.86 0.00 37.07 4.63
1482 6495 4.699522 AAGAAGTCGCCGGTGCCC 62.700 66.667 11.05 2.97 0.00 5.36
1526 6539 4.657824 CTTCGGTGGCGTCGGTGT 62.658 66.667 0.00 0.00 0.00 4.16
1542 6555 1.112950 GGCGGAAGTAGAAGTAGCCT 58.887 55.000 0.00 0.00 39.92 4.58
1695 6715 1.878070 CATGCACGCAACTCACCAT 59.122 52.632 0.00 0.00 0.00 3.55
1698 6718 1.068832 CATGCATGCACGCAACTCAC 61.069 55.000 25.37 0.00 46.87 3.51
1769 6789 6.091169 CCATGCATCCAAGAATTAACAACAAC 59.909 38.462 0.00 0.00 0.00 3.32
1770 6790 6.164876 CCATGCATCCAAGAATTAACAACAA 58.835 36.000 0.00 0.00 0.00 2.83
1772 6792 5.111293 CCCATGCATCCAAGAATTAACAAC 58.889 41.667 0.00 0.00 0.00 3.32
1773 6793 4.382901 GCCCATGCATCCAAGAATTAACAA 60.383 41.667 0.00 0.00 37.47 2.83
1775 6795 3.132646 TGCCCATGCATCCAAGAATTAAC 59.867 43.478 0.00 0.00 44.23 2.01
1796 6827 5.341727 CGTCACATGATACAGAATCGAGATG 59.658 44.000 0.00 0.00 37.42 2.90
1815 6846 7.855904 ACAATGTGAAATTTAAACTCTCGTCAC 59.144 33.333 0.00 0.00 35.75 3.67
1816 6847 7.925993 ACAATGTGAAATTTAAACTCTCGTCA 58.074 30.769 0.00 0.00 0.00 4.35
1819 6850 8.560576 ACAACAATGTGAAATTTAAACTCTCG 57.439 30.769 0.00 0.00 38.69 4.04
1919 10312 4.585955 TCTCGTAGGCCTGCTAATTAAG 57.414 45.455 17.99 4.83 0.00 1.85
1928 10321 0.108186 TGTTGCATCTCGTAGGCCTG 60.108 55.000 17.99 0.00 32.61 4.85
1936 10329 1.195347 CGTCTAGCTGTTGCATCTCG 58.805 55.000 0.00 0.00 42.74 4.04
1937 10330 2.568696 TCGTCTAGCTGTTGCATCTC 57.431 50.000 0.00 0.00 42.74 2.75
1943 10336 3.811722 TTTTGCATCGTCTAGCTGTTG 57.188 42.857 0.00 0.00 0.00 3.33
1966 10362 5.652452 AGACTTTTGAGTGGCTAGTGTTTTT 59.348 36.000 0.00 0.00 0.00 1.94
1971 10367 3.929610 GCTAGACTTTTGAGTGGCTAGTG 59.070 47.826 0.00 0.00 0.00 2.74
1972 10368 3.835395 AGCTAGACTTTTGAGTGGCTAGT 59.165 43.478 0.00 0.00 0.00 2.57
1979 10375 6.668283 TCCCTAATGTAGCTAGACTTTTGAGT 59.332 38.462 0.00 0.00 0.00 3.41
2002 10398 7.410120 AAACATGTTTATCCATCTTTCCTCC 57.590 36.000 22.10 0.00 0.00 4.30
2047 10451 3.140325 TCTTCCACATCTTGTTCCACC 57.860 47.619 0.00 0.00 0.00 4.61
2048 10452 5.507985 CCTTTTCTTCCACATCTTGTTCCAC 60.508 44.000 0.00 0.00 0.00 4.02
2051 10455 4.827284 TCCCTTTTCTTCCACATCTTGTTC 59.173 41.667 0.00 0.00 0.00 3.18
2065 10469 8.997734 AGTAGTTGAATCATATCTCCCTTTTCT 58.002 33.333 0.00 0.00 0.00 2.52
2179 11208 4.923871 ACTACAGATTTGCACGAACTACTG 59.076 41.667 0.00 0.00 0.00 2.74
2186 11219 8.392372 AGTATCTATACTACAGATTTGCACGA 57.608 34.615 0.70 0.00 41.55 4.35
2219 11252 7.964624 AGGCTCCTTAGTTAGTATAACCAATC 58.035 38.462 0.00 0.00 0.00 2.67
2220 11253 7.932683 AGGCTCCTTAGTTAGTATAACCAAT 57.067 36.000 0.00 0.00 0.00 3.16
2221 11254 7.744678 AAGGCTCCTTAGTTAGTATAACCAA 57.255 36.000 0.00 0.00 34.05 3.67
2222 11255 7.744678 AAAGGCTCCTTAGTTAGTATAACCA 57.255 36.000 0.98 0.00 34.84 3.67
2256 11289 9.465985 GTGGAAAATATTTTCGGTGAAGTTAAA 57.534 29.630 26.71 5.43 45.68 1.52
2258 11291 7.449086 AGGTGGAAAATATTTTCGGTGAAGTTA 59.551 33.333 26.71 8.31 45.68 2.24
2261 11294 6.267496 AGGTGGAAAATATTTTCGGTGAAG 57.733 37.500 26.71 0.00 45.68 3.02
2262 11295 7.948034 ATAGGTGGAAAATATTTTCGGTGAA 57.052 32.000 26.71 16.24 45.68 3.18
2293 11888 7.709182 CGGGCAATACAGGATATTATCGATAAA 59.291 37.037 21.05 11.25 0.00 1.40
2295 11890 6.548251 TCGGGCAATACAGGATATTATCGATA 59.452 38.462 0.00 0.00 0.00 2.92
2297 11892 4.707934 TCGGGCAATACAGGATATTATCGA 59.292 41.667 0.00 0.00 0.00 3.59
2298 11893 5.006153 TCGGGCAATACAGGATATTATCG 57.994 43.478 0.00 0.00 0.00 2.92
2299 11894 8.827677 GTTTATCGGGCAATACAGGATATTATC 58.172 37.037 0.00 0.00 0.00 1.75
2301 11896 7.913789 AGTTTATCGGGCAATACAGGATATTA 58.086 34.615 0.00 0.00 0.00 0.98
2307 11902 3.139077 GGAGTTTATCGGGCAATACAGG 58.861 50.000 0.00 0.00 0.00 4.00
2308 11903 3.804036 TGGAGTTTATCGGGCAATACAG 58.196 45.455 0.00 0.00 0.00 2.74
2309 11904 3.916359 TGGAGTTTATCGGGCAATACA 57.084 42.857 0.00 0.00 0.00 2.29
2310 11905 5.337554 GTTTTGGAGTTTATCGGGCAATAC 58.662 41.667 0.00 0.00 0.00 1.89
2315 11910 1.475280 GGGTTTTGGAGTTTATCGGGC 59.525 52.381 0.00 0.00 0.00 6.13
2316 11911 3.081710 AGGGTTTTGGAGTTTATCGGG 57.918 47.619 0.00 0.00 0.00 5.14
2317 11912 3.442625 GGAAGGGTTTTGGAGTTTATCGG 59.557 47.826 0.00 0.00 0.00 4.18
2318 11913 3.126343 CGGAAGGGTTTTGGAGTTTATCG 59.874 47.826 0.00 0.00 0.00 2.92
2319 11914 4.696899 CGGAAGGGTTTTGGAGTTTATC 57.303 45.455 0.00 0.00 0.00 1.75
2340 11935 1.366854 GGAAGCGTTTCGGGATCACC 61.367 60.000 5.89 0.00 33.98 4.02
2341 11936 1.693083 CGGAAGCGTTTCGGGATCAC 61.693 60.000 11.03 0.00 33.98 3.06
2342 11937 1.447140 CGGAAGCGTTTCGGGATCA 60.447 57.895 11.03 0.00 33.98 2.92
2343 11938 3.395669 CGGAAGCGTTTCGGGATC 58.604 61.111 11.03 0.00 33.98 3.36
2347 11942 2.674084 GGAACCGGAAGCGTTTCGG 61.674 63.158 9.46 16.77 33.98 4.30
2348 11943 1.226030 AAGGAACCGGAAGCGTTTCG 61.226 55.000 9.46 1.87 33.98 3.46
2349 11944 1.462283 GTAAGGAACCGGAAGCGTTTC 59.538 52.381 9.46 3.02 0.00 2.78
2352 11947 1.080298 CGTAAGGAACCGGAAGCGT 60.080 57.895 9.46 0.00 0.00 5.07
2353 11948 0.388907 TTCGTAAGGAACCGGAAGCG 60.389 55.000 9.46 2.61 38.47 4.68
2362 11957 7.989416 ATTTGTGGAATAGTTTCGTAAGGAA 57.011 32.000 0.00 0.00 38.47 3.36
2367 11962 9.675464 AGGATTTATTTGTGGAATAGTTTCGTA 57.325 29.630 0.00 0.00 32.06 3.43
2368 11963 8.575649 AGGATTTATTTGTGGAATAGTTTCGT 57.424 30.769 0.00 0.00 32.06 3.85
2370 11965 8.889717 TCGAGGATTTATTTGTGGAATAGTTTC 58.110 33.333 0.00 0.00 32.06 2.78
2373 11968 9.490379 GTATCGAGGATTTATTTGTGGAATAGT 57.510 33.333 0.00 0.00 32.06 2.12
2375 11970 9.706691 GAGTATCGAGGATTTATTTGTGGAATA 57.293 33.333 0.00 0.00 0.00 1.75
2376 11971 8.432805 AGAGTATCGAGGATTTATTTGTGGAAT 58.567 33.333 0.00 0.00 42.67 3.01
2378 11973 7.361457 AGAGTATCGAGGATTTATTTGTGGA 57.639 36.000 0.00 0.00 42.67 4.02
2379 11974 7.644986 GAGAGTATCGAGGATTTATTTGTGG 57.355 40.000 0.00 0.00 42.67 4.17
2400 11995 4.548451 TCTGAGTGTTAGTAGGACGAGA 57.452 45.455 0.00 0.00 0.00 4.04
2402 11997 4.903054 TCTTCTGAGTGTTAGTAGGACGA 58.097 43.478 0.00 0.00 0.00 4.20
2403 11998 5.354513 TGATCTTCTGAGTGTTAGTAGGACG 59.645 44.000 0.00 0.00 0.00 4.79
2404 11999 6.761099 TGATCTTCTGAGTGTTAGTAGGAC 57.239 41.667 0.00 0.00 0.00 3.85
2405 12000 7.119387 TCATGATCTTCTGAGTGTTAGTAGGA 58.881 38.462 0.00 0.00 0.00 2.94
2406 12001 7.340122 TCATGATCTTCTGAGTGTTAGTAGG 57.660 40.000 0.00 0.00 0.00 3.18
2409 12004 8.200792 GGTAATCATGATCTTCTGAGTGTTAGT 58.799 37.037 9.06 0.00 0.00 2.24
2410 12005 8.420222 AGGTAATCATGATCTTCTGAGTGTTAG 58.580 37.037 9.06 0.00 0.00 2.34
2411 12006 8.311395 AGGTAATCATGATCTTCTGAGTGTTA 57.689 34.615 9.06 0.00 0.00 2.41
2412 12007 7.192852 AGGTAATCATGATCTTCTGAGTGTT 57.807 36.000 9.06 0.00 0.00 3.32
2413 12008 6.805016 AGGTAATCATGATCTTCTGAGTGT 57.195 37.500 9.06 0.00 0.00 3.55
2414 12009 9.258826 CTTAAGGTAATCATGATCTTCTGAGTG 57.741 37.037 9.06 0.00 0.00 3.51
2415 12010 7.930865 GCTTAAGGTAATCATGATCTTCTGAGT 59.069 37.037 9.06 0.00 0.00 3.41
2416 12011 8.149647 AGCTTAAGGTAATCATGATCTTCTGAG 58.850 37.037 9.06 8.37 0.00 3.35
2417 12012 8.027524 AGCTTAAGGTAATCATGATCTTCTGA 57.972 34.615 9.06 0.00 0.00 3.27
2418 12013 8.557864 CAAGCTTAAGGTAATCATGATCTTCTG 58.442 37.037 9.06 6.16 0.00 3.02
2419 12014 7.718753 CCAAGCTTAAGGTAATCATGATCTTCT 59.281 37.037 9.06 3.90 0.00 2.85
2420 12015 7.040823 CCCAAGCTTAAGGTAATCATGATCTTC 60.041 40.741 9.06 2.68 0.00 2.87
2421 12016 6.774656 CCCAAGCTTAAGGTAATCATGATCTT 59.225 38.462 9.06 10.62 0.00 2.40
2422 12017 6.101734 TCCCAAGCTTAAGGTAATCATGATCT 59.898 38.462 9.06 0.00 0.00 2.75
2423 12018 6.205658 GTCCCAAGCTTAAGGTAATCATGATC 59.794 42.308 9.06 0.00 0.00 2.92
2424 12019 6.064717 GTCCCAAGCTTAAGGTAATCATGAT 58.935 40.000 7.76 1.18 0.00 2.45
2426 12021 4.580580 GGTCCCAAGCTTAAGGTAATCATG 59.419 45.833 7.76 1.99 0.00 3.07
2429 12024 3.202373 AGGGTCCCAAGCTTAAGGTAATC 59.798 47.826 11.55 0.00 0.00 1.75
2430 12025 3.198827 AGGGTCCCAAGCTTAAGGTAAT 58.801 45.455 11.55 0.00 0.00 1.89
2432 12027 2.354261 AGGGTCCCAAGCTTAAGGTA 57.646 50.000 11.55 0.00 0.00 3.08
2433 12028 2.354261 TAGGGTCCCAAGCTTAAGGT 57.646 50.000 11.55 0.12 0.00 3.50
2434 12029 4.412528 ACTTATAGGGTCCCAAGCTTAAGG 59.587 45.833 11.55 3.12 0.00 2.69
2435 12030 5.632034 ACTTATAGGGTCCCAAGCTTAAG 57.368 43.478 11.55 11.24 0.00 1.85
2438 12033 3.118371 CGAACTTATAGGGTCCCAAGCTT 60.118 47.826 11.55 0.00 0.00 3.74
2440 12035 2.484947 CCGAACTTATAGGGTCCCAAGC 60.485 54.545 11.55 0.00 0.00 4.01
2441 12036 2.770232 ACCGAACTTATAGGGTCCCAAG 59.230 50.000 11.55 7.82 0.00 3.61
2443 12038 2.555732 ACCGAACTTATAGGGTCCCA 57.444 50.000 11.55 0.00 0.00 4.37
2444 12039 5.070847 TGATTTACCGAACTTATAGGGTCCC 59.929 44.000 0.00 0.00 34.02 4.46
2445 12040 6.165700 TGATTTACCGAACTTATAGGGTCC 57.834 41.667 0.00 0.00 34.02 4.46
2467 12062 7.172190 AGCGAAGGAGTTTCATTCATGTATATG 59.828 37.037 4.63 0.00 37.04 1.78
2468 12063 7.220030 AGCGAAGGAGTTTCATTCATGTATAT 58.780 34.615 4.63 0.00 37.04 0.86
2469 12064 6.582636 AGCGAAGGAGTTTCATTCATGTATA 58.417 36.000 4.63 0.00 37.04 1.47
2470 12065 5.431765 AGCGAAGGAGTTTCATTCATGTAT 58.568 37.500 4.63 0.00 37.04 2.29
2471 12066 4.832248 AGCGAAGGAGTTTCATTCATGTA 58.168 39.130 4.63 0.00 37.04 2.29
2472 12067 3.679389 AGCGAAGGAGTTTCATTCATGT 58.321 40.909 4.63 0.00 37.04 3.21
2473 12068 3.686241 TGAGCGAAGGAGTTTCATTCATG 59.314 43.478 4.63 0.00 37.04 3.07
2475 12070 3.401033 TGAGCGAAGGAGTTTCATTCA 57.599 42.857 4.63 0.00 37.04 2.57
2476 12071 4.393062 TCATTGAGCGAAGGAGTTTCATTC 59.607 41.667 0.00 0.00 35.43 2.67
2480 12075 2.416893 GGTCATTGAGCGAAGGAGTTTC 59.583 50.000 0.00 0.00 0.00 2.78
2481 12076 2.427506 GGTCATTGAGCGAAGGAGTTT 58.572 47.619 0.00 0.00 0.00 2.66
2482 12077 2.100605 GGTCATTGAGCGAAGGAGTT 57.899 50.000 0.00 0.00 0.00 3.01
2483 12078 3.842869 GGTCATTGAGCGAAGGAGT 57.157 52.632 0.00 0.00 0.00 3.85
2502 12097 1.588139 CGACCACGGTTCCGCTATC 60.588 63.158 11.32 5.34 35.72 2.08
2504 12099 2.981560 GACGACCACGGTTCCGCTA 61.982 63.158 11.32 0.00 44.46 4.26
2505 12100 4.353437 GACGACCACGGTTCCGCT 62.353 66.667 11.32 0.00 44.46 5.52
2507 12102 3.980989 TGGACGACCACGGTTCCG 61.981 66.667 1.37 9.81 41.77 4.30
2516 12111 1.546961 AGGGATCGATATGGACGACC 58.453 55.000 0.00 0.00 42.37 4.79
2517 12112 3.945921 TCATAGGGATCGATATGGACGAC 59.054 47.826 0.00 0.00 42.37 4.34
2518 12113 4.230745 TCATAGGGATCGATATGGACGA 57.769 45.455 0.00 0.00 43.65 4.20
2520 12115 7.348080 TGTAATCATAGGGATCGATATGGAC 57.652 40.000 0.00 10.30 34.28 4.02
2521 12116 7.784550 TCATGTAATCATAGGGATCGATATGGA 59.215 37.037 0.00 0.00 34.28 3.41
2522 12117 7.955918 TCATGTAATCATAGGGATCGATATGG 58.044 38.462 0.00 0.00 34.28 2.74
2523 12118 9.993454 ATTCATGTAATCATAGGGATCGATATG 57.007 33.333 0.00 0.00 34.28 1.78
2524 12119 9.993454 CATTCATGTAATCATAGGGATCGATAT 57.007 33.333 0.00 0.00 34.28 1.63
2525 12120 9.200817 TCATTCATGTAATCATAGGGATCGATA 57.799 33.333 0.00 0.00 34.28 2.92
2526 12121 8.082672 TCATTCATGTAATCATAGGGATCGAT 57.917 34.615 0.00 0.00 34.28 3.59
2527 12122 7.480760 TCATTCATGTAATCATAGGGATCGA 57.519 36.000 0.00 0.00 34.28 3.59
2528 12123 9.993454 ATATCATTCATGTAATCATAGGGATCG 57.007 33.333 0.00 0.00 34.28 3.69
2531 12126 9.822185 CGAATATCATTCATGTAATCATAGGGA 57.178 33.333 0.00 0.00 32.47 4.20
2532 12127 9.822185 TCGAATATCATTCATGTAATCATAGGG 57.178 33.333 0.00 0.00 32.47 3.53
2536 12131 9.933723 TCACTCGAATATCATTCATGTAATCAT 57.066 29.630 0.00 0.00 34.21 2.45
2537 12132 9.762933 TTCACTCGAATATCATTCATGTAATCA 57.237 29.630 0.00 0.00 0.00 2.57
2539 12134 9.546428 TGTTCACTCGAATATCATTCATGTAAT 57.454 29.630 0.00 0.00 32.61 1.89
2540 12135 8.940768 TGTTCACTCGAATATCATTCATGTAA 57.059 30.769 0.00 0.00 32.61 2.41
2541 12136 9.546428 AATGTTCACTCGAATATCATTCATGTA 57.454 29.630 0.00 0.00 32.32 2.29
2542 12137 8.442632 AATGTTCACTCGAATATCATTCATGT 57.557 30.769 0.00 0.00 32.32 3.21
2543 12138 9.166126 CAAATGTTCACTCGAATATCATTCATG 57.834 33.333 0.31 0.00 32.32 3.07
2544 12139 9.112725 TCAAATGTTCACTCGAATATCATTCAT 57.887 29.630 0.31 0.00 32.32 2.57
2545 12140 8.491331 TCAAATGTTCACTCGAATATCATTCA 57.509 30.769 0.31 0.00 32.32 2.57
2546 12141 9.941664 AATCAAATGTTCACTCGAATATCATTC 57.058 29.630 0.00 0.00 32.32 2.67
2553 12148 8.896744 ACATGATAATCAAATGTTCACTCGAAT 58.103 29.630 0.00 0.00 30.41 3.34
2554 12149 8.177013 CACATGATAATCAAATGTTCACTCGAA 58.823 33.333 0.00 0.00 32.27 3.71
2555 12150 7.548780 TCACATGATAATCAAATGTTCACTCGA 59.451 33.333 0.00 0.00 32.27 4.04
2556 12151 7.687445 TCACATGATAATCAAATGTTCACTCG 58.313 34.615 0.00 0.00 32.27 4.18
2557 12152 9.447040 CATCACATGATAATCAAATGTTCACTC 57.553 33.333 0.00 0.00 32.27 3.51
2558 12153 8.963725 ACATCACATGATAATCAAATGTTCACT 58.036 29.630 0.00 0.00 32.27 3.41
2559 12154 9.577110 AACATCACATGATAATCAAATGTTCAC 57.423 29.630 0.00 0.00 30.64 3.18
2560 12155 9.791820 GAACATCACATGATAATCAAATGTTCA 57.208 29.630 18.92 5.24 40.65 3.18
2561 12156 9.241317 GGAACATCACATGATAATCAAATGTTC 57.759 33.333 17.20 17.20 40.49 3.18
2562 12157 8.199449 GGGAACATCACATGATAATCAAATGTT 58.801 33.333 0.00 3.51 34.79 2.71
2563 12158 7.562454 AGGGAACATCACATGATAATCAAATGT 59.438 33.333 0.00 0.00 34.92 2.71
2564 12159 7.948357 AGGGAACATCACATGATAATCAAATG 58.052 34.615 0.00 0.00 32.63 2.32
2565 12160 8.543293 AAGGGAACATCACATGATAATCAAAT 57.457 30.769 0.00 0.00 32.63 2.32
2566 12161 7.959658 AAGGGAACATCACATGATAATCAAA 57.040 32.000 0.00 0.00 32.63 2.69
2567 12162 7.631161 GCAAAGGGAACATCACATGATAATCAA 60.631 37.037 0.00 0.00 32.63 2.57
2568 12163 6.183360 GCAAAGGGAACATCACATGATAATCA 60.183 38.462 0.00 0.00 32.63 2.57
2569 12164 6.040166 AGCAAAGGGAACATCACATGATAATC 59.960 38.462 0.00 0.00 32.63 1.75
2570 12165 5.895534 AGCAAAGGGAACATCACATGATAAT 59.104 36.000 0.00 0.00 32.63 1.28
2571 12166 5.263599 AGCAAAGGGAACATCACATGATAA 58.736 37.500 0.00 0.00 32.63 1.75
2572 12167 4.858850 AGCAAAGGGAACATCACATGATA 58.141 39.130 0.00 0.00 32.63 2.15
2573 12168 3.705051 AGCAAAGGGAACATCACATGAT 58.295 40.909 0.00 0.00 34.56 2.45
2574 12169 3.159213 AGCAAAGGGAACATCACATGA 57.841 42.857 0.00 0.00 0.00 3.07
2575 12170 3.256383 TGAAGCAAAGGGAACATCACATG 59.744 43.478 0.00 0.00 0.00 3.21
2576 12171 3.256631 GTGAAGCAAAGGGAACATCACAT 59.743 43.478 0.00 0.00 36.58 3.21
2577 12172 2.622942 GTGAAGCAAAGGGAACATCACA 59.377 45.455 0.00 0.00 36.58 3.58
2578 12173 2.350772 CGTGAAGCAAAGGGAACATCAC 60.351 50.000 0.00 0.00 34.01 3.06
2579 12174 1.879380 CGTGAAGCAAAGGGAACATCA 59.121 47.619 0.00 0.00 0.00 3.07
2580 12175 2.619013 CGTGAAGCAAAGGGAACATC 57.381 50.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.